Pregenerated sensors for MEST (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051855Ensembl transcript IDs: ENSMUST00000124665.3, ENSMUST00000151777.8, ENSMUST00000157040.8, ENSMUST00000163949.9
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACAAAACAACAGCAGCTCTATTTATTTGGTCAGATGTCACAGAAATaGGAGGATTATCATGTCACCCTTAGAGATGAGGTGGACTATTGT | + |
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Preference number: 1 (lower is better) Translates to: TKQQQLYLFGQMSQK*EDYHVTLRDEVDYC Trigger: ACAATAGTCCACCTCATCTCTAAGGGTGACATGATAATCCTCTCATTTCTGTGACATCTGACCAAATAAATAGAGCTGCTGTTGTTTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| 3UTR-3UTR GCA 90 bp | AGAGGAGCCAATGGACATTCATTCCGCACTTACATGTCCCTTCCCCTCCACGTCCTGGGGTGGGGAGAGTaGTGGGAACTGAACCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: RGANGHSFRTYMSLPLHVLGWGE*WELNPR Trigger: CCTTGGGTTCAGTTCCCAGCACTCTCCCCACCCCAG...GACGTGGAGGGGAAGGGACATGTAAGTGCGGAATGAATGTCCATTGGCTCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| 3UTR-3UTR CCA 90 bp | AGAGGAGCCAATGGACATTCATTCCGCACTTACATGTCCCTTCCCCTCCACGTCTTCGATGGGCTGGGGTaGGGAGAGTGCTGGGAACTG | + |
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Preference number: 2 (lower is better) Translates to: RGANGHSFRTYMSLPLHVFDGLG*GECWEL Trigger: CAGTTCCCAGCACTCTCCCCACCCCAGCCCATCGAA...GACGTGGAGGGGAAGGGACATGTAAGTGCGGAATGAATGTCCATTGGCTCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| 3UTR-3UTR CCA 90 bp | AGGAGCCAATGGACATTCATTCCGCACTTACATGTCCCTTCCCCTCCACGTCAGTTAGGTTCGATGGGCTaGGGTGGGGAGAGTGCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: RSQWTFIPHLHVPSPPRQLGSMG*GGESAG Trigger: CCCAGCACTCTCCCCACCCCAGCCCATCGAACCTAA...CTGACGTGGAGGGGAAGGGACATGTAAGTGCGGAATGAATGTCCATTGGCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| 3UTR-3UTR CCA 90 bp | ATGCTGAGCGGCCATCATAGAGGAGCCAATGGACATTCATTCCGCACTTACATGTTCGATGGGCTGGGGTaGGGAGAGTGCTGGGAACTG | + |
|
Preference number: 2 (lower is better) Translates to: MLSGHHRGANGHSFRTYMFDGLG*GECWEL Trigger: CAGTTCCCAGCACTCTCCCCACCCCAGCCCATCGAA...CATGTAAGTGCGGAATGAATGTCCATTGGCTCCTCTATGATGGCCGCTCAGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| 3UTR-3UTR TCA 90 bp | AGAGGAGCCAATGGACATTCATTCCGCACTTACATGTCCCTTCCCCTCCACGTCAACTGTAACAGATCCTaGAAGGGAGATAGCAAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: RGANGHSFRTYMSLPLHVNCNRS*KGDSKL Trigger: GAGCTTGCTATCTCCCTTTCAGGATCTGTTACAGTT...GACGTGGAGGGGAAGGGACATGTAAGTGCGGAATGAATGTCCATTGGCTCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| 3UTR-3UTR TCA 90 bp | AGGAGCCAATGGACATTCATTCCGCACTTACATGTCCCTTCCCCTCCACGTCAGCAGATGTCACAGAAATaGGAGGATTATCATGTCACC | + |
|
Preference number: 2 (lower is better) Translates to: RSQWTFIPHLHVPSPPRQQMSQK*EDYHVT Trigger: GGTGACATGATAATCCTCTCATTTCTGTGACATCTG...CTGACGTGGAGGGGAAGGGACATGTAAGTGCGGAATGAATGTCCATTGGCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| 3UTR-3UTR TCA 90 bp | AGAGGAGCCAATGGACATTCATTCCGCACTTACATGTCCCTTCCCCTCCACGTCCTAAATGTAAAGGAGTaGCAAGATGATCCCTCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: RGANGHSFRTYMSLPLHVLNVKE*QDDPSH Trigger: ATGAGAGGGATCATCTTGTCACTCCTTTACATTTAG...GACGTGGAGGGGAAGGGACATGTAAGTGCGGAATGAATGTCCATTGGCTCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| 3UTR-3UTR TCA 90 bp | AGGAGCCAATGGACATTCATTCCGCACTTACATGTCCCTTCCCCTCCACGTCAGCTAAATGTAAAGGAGTaGCAAGATGATCCCTCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: RSQWTFIPHLHVPSPPRQLNVKE*QDDPSH Trigger: ATGAGAGGGATCATCTTGTCACTCCTTTACATTTAG...CTGACGTGGAGGGGAAGGGACATGTAAGTGCGGAATGAATGTCCATTGGCTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| 3UTR-3UTR CCA 90 bp | AGGAGCCAATGGACATTCATTCCGCACTTACATGTCCCTTCCCCTCCACGTCAGTTGGGCATTTCTAAGTaGAATACACACAGATACGAG | + |
|
Preference number: 2 (lower is better) Translates to: RSQWTFIPHLHVPSPPRQLGISK*NTHRYE Trigger: CTCGTATCTGTGTGTATTCCACTTAGAAATGCCCAA...CTGACGTGGAGGGGAAGGGACATGTAAGTGCGGAATGAATGTCCATTGGCTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| 3UTR-3UTR CCA 90 bp | ATGTCTCTGGAAACTTGCCTGTTTAAGTACAGGAGTTATATGAGAAAGCCTTTCTTAGGTTCGATGGGCTaGGGTGGGGAGAGTGCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: MSLETCLFKYRSYMRKPFLGSMG*GGESAG Trigger: CCCAGCACTCTCCCCACCCCAGCCCATCGAACCTAA...GAAAGGCTTTCTCATATAACTCCTGTACTTAAACAGGCAAGTTTCCAGAGACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| 3UTR-3UTR TCA 90 bp | ATGCTGAGCGGCCATCATAGAGGAGCCAATGGACATTCATTCCGCACTTACATGCTAAATGTAAAGGAGTaGCAAGATGATCCCTCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: MLSGHHRGANGHSFRTYMLNVKE*QDDPSH Trigger: ATGAGAGGGATCATCTTGTCACTCCTTTACATTTAG...CATGTAAGTGCGGAATGAATGTCCATTGGCTCCTCTATGATGGCCGCTCAGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| 3UTR-3UTR TCA 90 bp | ATGTCTCTGGAAACTTGCCTGTTTAAGTACAGGAGTTATATGAGAAAGCCTTTCAACTGTAACAGATCCTaGAAGGGAGATAGCAAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: MSLETCLFKYRSYMRKPFNCNRS*KGDSKL Trigger: GAGCTTGCTATCTCCCTTTCAGGATCTGTTACAGTT...GAAAGGCTTTCTCATATAACTCCTGTACTTAAACAGGCAAGTTTCCAGAGACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| 3UTR-3UTR TCA 90 bp | ATGTCTCTGGAAACTTGCCTGTTTAAGTACAGGAGTTATATGAGAAAGCCTTTCCAGATGTCACAGAAATaGGAGGATTATCATGTCACC | + |
|
Preference number: 2 (lower is better) Translates to: MSLETCLFKYRSYMRKPFQMSQK*EDYHVT Trigger: GGTGACATGATAATCCTCTCATTTCTGTGACATCTG...GAAAGGCTTTCTCATATAACTCCTGTACTTAAACAGGCAAGTTTCCAGAGACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| 3UTR-3UTR CCA 90 bp | ATTATCATGTCACCCTTAGAGATGAGGTGGACTATTGTGTCACCCTATAGAGTTTTGGGCATTTCTAAGTaGAATACACACAGATACGAG | + |
|
Preference number: 2 (lower is better) Translates to: IIMSPLEMRWTIVSPYRVLGISK*NTHRYE Trigger: CTCGTATCTGTGTGTATTCCACTTAGAAATGCCCAA...AACTCTATAGGGTGACACAATAGTCCACCTCATCTCTAAGGGTGACATGATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| 3UTR-3UTR TCA 90 bp | ATGTCTCTGGAAACTTGCCTGTTTAAGTACAGGAGTTATATGAGAAAGCCTTTCGTTTGTTCACCAATGTaGAGGAAATGGACTTTGATG | + |
|
Preference number: 2 (lower is better) Translates to: MSLETCLFKYRSYMRKPFVCSPM*RKWTLM Trigger: CATCAAAGTCCATTTCCTTCACATTGGTGAACAAAC...GAAAGGCTTTCTCATATAACTCCTGTACTTAAACAGGCAAGTTTCCAGAGACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| 3UTR-3UTR CCA 90 bp | ATGTCTCTGGAAACTTGCCTGTTTAAGTACAGGAGTTATATGAGAAAGCCTTTCTTGGGCATTTCTAAGTaGAATACACACAGATACGAG | + |
|
Preference number: 2 (lower is better) Translates to: MSLETCLFKYRSYMRKPFLGISK*NTHRYE Trigger: CTCGTATCTGTGTGTATTCCACTTAGAAATGCCCAA...GAAAGGCTTTCTCATATAACTCCTGTACTTAAACAGGCAAGTTTCCAGAGACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| 3UTR TCA 72 bp | CTGTTTAAGTACAGGAGTTATATGAGAAAGCCTTTCTaGACAGCCAGCGGGATGCTGAGCGGCCATCATAGA | + |
|
Preference number: 3 (lower is better) Translates to: LFKYRSYMRKPF*TASGMLSGHHR Trigger: TCTATGATGGCCGCTCAGCATCCCGCTGGCTGTTCAGAAAGGCTTTCTCATATAACTCCTGTACTTAAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| 3UTR TCA 72 bp | GACAAGATGATCCCTCTCATAAACTGTAACAGATCCTaGAAGGGAGATAGCAAGCTCCTCCCTCACTCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: DKMIPLINCNRS*KGDSKLLPHSV Trigger: TACAGAGTGAGGGAGGAGCTTGCTATCTCCCTTTCAGGATCTGTTACAGTTTATGAGAGGGATCATCTTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| CDS-3UTR TCA 90 bp | AGGAGCCAATGGACATTCATTCCGCACTTACATGTCCCTTCCCCTCCACGTCAGGCCAGAAGTCTTCCATaGGTGCAGAGCAGGGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RSQWTFIPHLHVPSPPRQARSLP*VQSRGE Trigger: CTCTCCCCTGCTCTGCACTCATGGAAGACTTCTGGC...CTGACGTGGAGGGGAAGGGACATGTAAGTGCGGAATGAATGTCCATTGGCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| CDS-3UTR TCA 90 bp | AGAGGAGCCAATGGACATTCATTCCGCACTTACATGTCCCTTCCCCTCCACGTCGCCAGAAGTCTTCCATaGGTGCAGAGCAGGGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RGANGHSFRTYMSLPLHVARSLP*VQSRGE Trigger: CTCTCCCCTGCTCTGCACTCATGGAAGACTTCTGGC...GACGTGGAGGGGAAGGGACATGTAAGTGCGGAATGAATGTCCATTGGCTCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| CDS-3UTR CCA 90 bp | AGGAGCCAATGGACATTCATTCCGCACTTACATGTCCCTTCCCCTCCACGTCAGAGGGCGATCACTCGATaGAACCTCAGGGTCAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RSQWTFIPHLHVPSPPRQRAITR*NLRVSP Trigger: AGGGCTGACCCTGAGGTTCCATCGAGTGATCGCCCT...CTGACGTGGAGGGGAAGGGACATGTAAGTGCGGAATGAATGTCCATTGGCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| CDS-3UTR TCA 90 bp | ATGCTGAGCGGCCATCATAGAGGAGCCAATGGACATTCATTCCGCACTTACATGGCCAGAAGTCTTCCATaGGTGCAGAGCAGGGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: MLSGHHRGANGHSFRTYMARSLP*VQSRGE Trigger: CTCTCCCCTGCTCTGCACTCATGGAAGACTTCTGGC...CATGTAAGTGCGGAATGAATGTCCATTGGCTCCTCTATGATGGCCGCTCAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| CDS-3UTR CCA 90 bp | ATGCTGAGCGGCCATCATAGAGGAGCCAATGGACATTCATTCCGCACTTACATGAGGGCGATCACTCGATaGAACCTCAGGGTCAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: MLSGHHRGANGHSFRTYMRAITR*NLRVSP Trigger: AGGGCTGACCCTGAGGTTCCATCGAGTGATCGCCCT...CATGTAAGTGCGGAATGAATGTCCATTGGCTCCTCTATGATGGCCGCTCAGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| CDS-3UTR CCA 90 bp | AGGAGCCAATGGACATTCATTCCGCACTTACATGTCCCTTCCCCTCCACGTCAGACAGCTCACTCTCAGTaGGTCGAGTATACGGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: RSQWTFIPHLHVPSPPRQTAHSQ*VEYTVQ Trigger: TTGGACCGTATACTCGACCCACTGAGAGTGAGCTGT...CTGACGTGGAGGGGAAGGGACATGTAAGTGCGGAATGAATGTCCATTGGCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| CDS-3UTR CCA 90 bp | AGAGGAGCCAATGGACATTCATTCCGCACTTACATGTCCCTTCCCCTCCACGTCACAGCTCACTCTCAGTaGGTCGAGTATACGGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: RGANGHSFRTYMSLPLHVTAHSQ*VEYTVQ Trigger: TTGGACCGTATACTCGACCCACTGAGAGTGAGCTGT...GACGTGGAGGGGAAGGGACATGTAAGTGCGGAATGAATGTCCATTGGCTCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| CDS-3UTR CCA 90 bp | AGAGGAGCCAATGGACATTCATTCCGCACTTACATGTCCCTTCCCCTCCACGTCTCTTTGAGGAGCTTTTaGAGAAGGAGAGGACGATGC | + |
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Preference number: 4 (lower is better) Translates to: RGANGHSFRTYMSLPLHVSLRSF*RRRGRC Trigger: GCATCGTCCTCTCCTTCTCCAAAAGCTCCTCAAAGA...GACGTGGAGGGGAAGGGACATGTAAGTGCGGAATGAATGTCCATTGGCTCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| CDS-3UTR GCA 90 bp | ATGCTGAGCGGCCATCATAGAGGAGCCAATGGACATTCATTCCGCACTTACATGCGGCCAGATCGATTCTaGTTGTACCTGTACAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: MLSGHHRGANGHSFRTYMRPDRF*LYLYSS Trigger: ACTGCTGTACAGGTACAAGCAGAATCGATCTGGCCG...CATGTAAGTGCGGAATGAATGTCCATTGGCTCCTCTATGATGGCCGCTCAGCAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| CDS-3UTR TCA 90 bp | ATGCTGAGCGGCCATCATAGAGGAGCCAATGGACATTCATTCCGCACTTACATGGTAGGCCTTTGTAGGTaGAAAACTTGCCAGAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: MLSGHHRGANGHSFRTYMVGLCR*KTCQKS Trigger: AGACTTCTGGCAAGTTTTTCACCTACAAAGGCCTAC...CATGTAAGTGCGGAATGAATGTCCATTGGCTCCTCTATGATGGCCGCTCAGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| CDS-3UTR CCA 90 bp | ATTATCATGTCACCCTTAGAGATGAGGTGGACTATTGTGTCACCCTATAGAGTTAGGGCGATCACTCGATaGAACCTCAGGGTCAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: IIMSPLEMRWTIVSPYRVRAITR*NLRVSP Trigger: AGGGCTGACCCTGAGGTTCCATCGAGTGATCGCCCT...AACTCTATAGGGTGACACAATAGTCCACCTCATCTCTAAGGGTGACATGATAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| CDS-3UTR GCA 90 bp | ATTATCATGTCACCCTTAGAGATGAGGTGGACTATTGTGTCACCCTATAGAGTTGGTTGCCGTCATTGTTaGGAATCACAGCCCACATGT | + |
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Preference number: 4 (lower is better) Translates to: IIMSPLEMRWTIVSPYRVGCRHC*ESQPTC Trigger: ACATGTGGGCTGTGATTCGCAACAATGACGGCAACC...AACTCTATAGGGTGACACAATAGTCCACCTCATCTCTAAGGGTGACATGATAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| CDS-3UTR GCA 90 bp | ATGTCTCTGGAAACTTGCCTGTTTAAGTACAGGAGTTATATGAGAAAGCCTTTCCGGCCAGATCGATTCTaGTTGTACCTGTACAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: MSLETCLFKYRSYMRKPFRPDRF*LYLYSS Trigger: ACTGCTGTACAGGTACAAGCAGAATCGATCTGGCCG...GAAAGGCTTTCTCATATAACTCCTGTACTTAAACAGGCAAGTTTCCAGAGACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| CDS-3UTR GCA 90 bp | ATGTCTCTGGAAACTTGCCTGTTTAAGTACAGGAGTTATATGAGAAAGCCTTTCGGTTGCCGTCATTGTTaGGAATCACAGCCCACATGT | + |
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Preference number: 4 (lower is better) Translates to: MSLETCLFKYRSYMRKPFGCRHC*ESQPTC Trigger: ACATGTGGGCTGTGATTCGCAACAATGACGGCAACC...GAAAGGCTTTCTCATATAACTCCTGTACTTAAACAGGCAAGTTTCCAGAGACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| 3UTR CAA 72 bp | CACCCTATAGAGTTCCAGCTGCCTGATTCCTGTAGTTaGTTCACCAATGTGAAGGAAATGGACTTTGATGAA | + |
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Preference number: 4 (lower is better) Translates to: HPIEFQLPDSCS*FTNVKEMDFDE Trigger: TTCATCAAAGTCCATTTCCTTCACATTGGTGAACAAACTACAGGAATCAGGCAGCTGGAACTCTATAGGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| 3UTR CAA 72 bp | GAGGAGCTGCCCCTAGGCTGTTATTTACTATTCAGCTaGGACTTTCTAAACAGTAACAGTAAATCTCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: EELPLGCYLLFS*DFLNSNSKSLA Trigger: TGCCAGAGATTTACTGTTACTGTTTAGAAAGTCCAAGCTGAATAGTAAATAACAGCCTAGGGGCAGCTCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| CDS-3UTR TCA 90 bp | ATTATCATGTCACCCTTAGAGATGAGGTGGACTATTGTGTCACCCTATAGAGTTGTAGGCCTTTGTAGGTaGAAAACTTGCCAGAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: IIMSPLEMRWTIVSPYRVVGLCR*KTCQKS Trigger: AGACTTCTGGCAAGTTTTTCACCTACAAAGGCCTAC...AACTCTATAGGGTGACACAATAGTCCACCTCATCTCTAAGGGTGACATGATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| CDS-3UTR CCA 90 bp | ATGTCTCTGGAAACTTGCCTGTTTAAGTACAGGAGTTATATGAGAAAGCCTTTCTCTTTGAGGAGCTTTTaGAGAAGGAGAGGACGATGC | + |
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Preference number: 4 (lower is better) Translates to: MSLETCLFKYRSYMRKPFSLRSF*RRRGRC Trigger: GCATCGTCCTCTCCTTCTCCAAAAGCTCCTCAAAGA...GAAAGGCTTTCTCATATAACTCCTGTACTTAAACAGGCAAGTTTCCAGAGACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| CDS-3UTR CAA 90 bp | AGAGGAGCCAATGGACATTCATTCCGCACTTACATGTCCCTTCCCCTCCACGTCCTGTCGATGACCAGGTaGCCGTCATTGTTGCGAATC | + |
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Preference number: 5 (lower is better) Translates to: RGANGHSFRTYMSLPLHVLSMTR*PSLLRI Trigger: GATTCGCAACAATGACGGCAACCTGGTCATCGACAG...GACGTGGAGGGGAAGGGACATGTAAGTGCGGAATGAATGTCCATTGGCTCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| CDS-3UTR CAA 90 bp | AGAGGAGCCAATGGACATTCATTCCGCACTTACATGTCCCTTCCCCTCCACGTCCCAGATCGATTCTGCTaGTACCTGTACAGCAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RGANGHSFRTYMSLPLHVPDRFC*YLYSSS Trigger: GGAACTGCTGTACAGGTACAAGCAGAATCGATCTGG...GACGTGGAGGGGAAGGGACATGTAAGTGCGGAATGAATGTCCATTGGCTCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| CDS-3UTR CAA 90 bp | ATGCTGAGCGGCCATCATAGAGGAGCCAATGGACATTCATTCCGCACTTACATGCTGTCGATGACCAGGTaGCCGTCATTGTTGCGAATC | + |
|
Preference number: 5 (lower is better) Translates to: MLSGHHRGANGHSFRTYMLSMTR*PSLLRI Trigger: GATTCGCAACAATGACGGCAACCTGGTCATCGACAG...CATGTAAGTGCGGAATGAATGTCCATTGGCTCCTCTATGATGGCCGCTCAGCAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| CDS-3UTR CAA 90 bp | ATGCTGAGCGGCCATCATAGAGGAGCCAATGGACATTCATTCCGCACTTACATGGTCTTTGAGGAGCTTTaGGAGAAGGAGAGGACGATG | + |
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Preference number: 5 (lower is better) Translates to: MLSGHHRGANGHSFRTYMVFEEL*EKERTM Trigger: CATCGTCCTCTCCTTCTCCAAAAGCTCCTCAAAGAC...CATGTAAGTGCGGAATGAATGTCCATTGGCTCCTCTATGATGGCCGCTCAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| CDS-3UTR CAA 90 bp | ATTATCATGTCACCCTTAGAGATGAGGTGGACTATTGTGTCACCCTATAGAGTTGTCTTTGAGGAGCTTTaGGAGAAGGAGAGGACGATG | + |
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Preference number: 5 (lower is better) Translates to: IIMSPLEMRWTIVSPYRVVFEEL*EKERTM Trigger: CATCGTCCTCTCCTTCTCCAAAAGCTCCTCAAAGAC...AACTCTATAGGGTGACACAATAGTCCACCTCATCTCTAAGGGTGACATGATAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| CDS-3UTR CAA 90 bp | ATGTCTCTGGAAACTTGCCTGTTTAAGTACAGGAGTTATATGAGAAAGCCTTTCCCAGATCGATTCTGCTaGTACCTGTACAGCAGTTCC | + |
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Preference number: 5 (lower is better) Translates to: MSLETCLFKYRSYMRKPFPDRFC*YLYSSS Trigger: GGAACTGCTGTACAGGTACAAGCAGAATCGATCTGG...GAAAGGCTTTCTCATATAACTCCTGTACTTAAACAGGCAAGTTTCCAGAGACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| CDS-3UTR CAA 90 bp | ATGTCTCTGGAAACTTGCCTGTTTAAGTACAGGAGTTATATGAGAAAGCCTTTCGTCTTTGAGGAGCTTTaGGAGAAGGAGAGGACGATG | + |
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Preference number: 5 (lower is better) Translates to: MSLETCLFKYRSYMRKPFVFEEL*EKERTM Trigger: CATCGTCCTCTCCTTCTCCAAAAGCTCCTCAAAGAC...GAAAGGCTTTCTCATATAACTCCTGTACTTAAACAGGCAAGTTTCCAGAGACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124665.3 ENSMUST00000157040.8 ENSMUST00000163949.9 |
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| CDS GCA 72 bp | CTTTGGTCTAAGTCGATGGGTTCTCCTCTGAATACTTaGCACATTCCATCAGTGAAAGTGAAGGCCAAGCGA | + |
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Preference number: 6 (lower is better) Translates to: LWSKSMGSPLNT*HIPSVKVKAKR Trigger: TCGCTTGGCCTTCACTTTCACTGATGGAATGTGGCAAGTATTCAGAGGAGAACCCATCGACTTAGACCAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151777.8 |
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