Pregenerated sensors for MESP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030543Ensembl transcript IDs: ENSMUST00000107394.3
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CAAGCAGGACATGGACCTCCTTTGTCCTCCACACTCAGGCCACCCCGTACTCAGTACCCAATGTTTATCTaGCCCAGACACCGTTTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: QAGHGPPLSSTLRPPRTQYPMFI*PRHRFH Trigger: ATGGAAACGGTGTCTGGGGCAGATAAACATTGGGTA...CTGAGTACGGGGTGGCCTGAGTGTGGAGGACAAAGGAGGTCCATGTCCTGCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| 3UTR CCA 72 bp | TACGATTCTGGCCAGCTGTCTCCAGCAAGCAGGACATaGACCTCCTTTGTCCTCCACACTCAGGCCACCCCG | + |
|
Preference number: 3 (lower is better) Translates to: YDSGQLSPASRT*TSFVLHTQATP Trigger: CGGGGTGGCCTGAGTGTGGAGGACAAAGGAGGTCCATGTCCTGCTTGCTGGAGACAGCTGGCCAGAATCGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| 3UTR-3UTR CAA 90 bp | AGCTGTCTCCAGCAAGCAGGACATGGACCTCCTTTGTCCTCCACACTCAGGCCAACAGCATTAGCAAGGTaGAGAATCACTGCTCTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SCLQQAGHGPPLSSTLRPTALAR*RITALE Trigger: TTCTAGAGCAGTGATTCTCAACCTTGCTAATGCTGT...TGGCCTGAGTGTGGAGGACAAAGGAGGTCCATGTCCTGCTTGCTGGAGACAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS-3UTR TCA 90 bp | TCCACACTCAGGCCACCCCGTACTCAGAGCAGCTCAGCCTGTGCTCTGCAGAGTAGACCCTGGAGGCTCTaGGGAGGAGGCGACTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: STLRPPRTQSSSACALQSRPWRL*GGGDWA Trigger: GGCCCAGTCGCCTCCTCCTCAGAGCCTCCAGGGTCT...ACTCTGCAGAGCACAGGCTGAGCTGCTCTGAGTACGGGGTGGCCTGAGTGTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS-3UTR CCA 90 bp | GTCCTCCACACTCAGGCCACCCCGTACTCAGAGCAGCTCAGCCTGTGCTCTGCACTGGCCACAGGAAGCTaGAGGGCAGGGCTGGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: VLHTQATPYSEQLSLCSALATGS*RAGLEP Trigger: GGGTTCCAGCCCTGCCCTCCAGCTTCCTGTGGCCAG...TGCAGAGCACAGGCTGAGCTGCTCTGAGTACGGGGTGGCCTGAGTGTGGAGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS-3UTR GCA 90 bp | GATTCTGGCCAGCTGTCTCCAGCAAGCAGGACATGGACCTCCTTTGTCCTCCACGGTCAGGCTCTGGCCTaGAGGTGCCACCGACGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: DSGQLSPASRTWTSFVLHGQALA*RCHRRR Trigger: CCGCCGTCGGTGGCACCTGCAGGCCAGAGCCTGACC...GTGGAGGACAAAGGAGGTCCATGTCCTGCTTGCTGGAGACAGCTGGCCAGAATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS-3UTR CCA 90 bp | GATTCTGGCCAGCTGTCTCCAGCAAGCAGGACATGGACCTCCTTTGTCCTCCACGCTTCTCGCGCTCGCTaGCGCTCTGCCGCTGTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: DSGQLSPASRTWTSFVLHASRAR*RSAAVR Trigger: GCGGACAGCGGCAGAGCGCCAGCGAGCGCGAGAAGC...GTGGAGGACAAAGGAGGTCCATGTCCTGCTTGCTGGAGACAGCTGGCCAGAATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS-3UTR CCA 90 bp | CTCCAGCAAGCAGGACATGGACCTCCTTTGTCCTCCACACTCAGGCCACCCCGTGCGGGGCAGGAGAAGTaGGCTTCCCAGGGACAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LQQAGHGPPLSSTLRPPRAGQEK*ASQGQA Trigger: TGCCTGTCCCTGGGAAGCCCACTTCTCCTGCCCCGC...ACGGGGTGGCCTGAGTGTGGAGGACAAAGGAGGTCCATGTCCTGCTTGCTGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS-3UTR TCA 90 bp | CCACCCCGTACTCAGAGCAGCTCAGCCTGTGCTCTGCAGAGTGCTGAGCCTTTAAAGCATCTGAGCCTGTaGGGGGCTGCCACCGTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PPRTQSSSACALQSAEPLKHLSL*GAATVG Trigger: CCCGACGGTGGCAGCCCCTCACAGGCTCAGATGCTT...TAAAGGCTCAGCACTCTGCAGAGCACAGGCTGAGCTGCTCTGAGTACGGGGTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS-3UTR GCA 90 bp | CAAGCAGGACATGGACCTCCTTTGTCCTCCACACTCAGGCCACCCCGTACTCAGGGACAGCCACTGAGCTaGAGGCCTGAGCTGGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QAGHGPPLSSTLRPPRTQGQPLS*RPELGV Trigger: CACCCCCAGCTCAGGCCTGCAGCTCAGTGGCTGTCC...CTGAGTACGGGGTGGCCTGAGTGTGGAGGACAAAGGAGGTCCATGTCCTGCTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS-3UTR GCA 90 bp | TGTCCTCCACACTCAGGCCACCCCGTACTCAGAGCAGCTCAGCCTGTGCTCTGCACATGCTTGAGGTGGTaGCCAGGGAGAGGAGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CPPHSGHPVLRAAQPVLCTCLRW*PGRGVS Trigger: GCTGACTCCTCTCCCTGGGCACCACCTCAAGCATGT...GCAGAGCACAGGCTGAGCTGCTCTGAGTACGGGGTGGCCTGAGTGTGGAGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS-3UTR CCA 90 bp | CTCCAGCAAGCAGGACATGGACCTCCTTTGTCCTCCACACTCAGGCCACCCCGTTGGGAGAAGACCCAGTaGTCGAGACCCTGGAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LQQAGHGPPLSSTLRPPRWEKTQ*SRPWRL Trigger: GAGCCTCCAGGGTCTCGACCACTGGGTCTTCTCCCA...ACGGGGTGGCCTGAGTGTGGAGGACAAAGGAGGTCCATGTCCTGCTTGCTGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| 3UTR CAA 72 bp | GCCAGCTGTCTCCAGCAAGCAGGACATGGACCTCCTTaGTCCTCCACACTCAGGCCACCCCGTACTCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASCLQQAGHGPP*SSTLRPPRTQS Trigger: GCTCTGAGTACGGGGTGGCCTGAGTGTGGAGGACAAAGGAGGTCCATGTCCTGCTTGCTGGAGACAGCTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS-3UTR TCA 90 bp | GATTCTGGCCAGCTGTCTCCAGCAAGCAGGACATGGACCTCCTTTGTCCTCCACGTTCAGGACAGCCACTaGGCTGCAGGCCTGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DSGQLSPASRTWTSFVLHVQDSH*AAGLSW Trigger: CCAGCTCAGGCCTGCAGCTCAGTGGCTGTCCTGAAC...GTGGAGGACAAAGGAGGTCCATGTCCTGCTTGCTGGAGACAGCTGGCCAGAATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS-3UTR CCA 90 bp | AGCTGTCTCCAGCAAGCAGGACATGGACCTCCTTTGTCCTCCACACTCAGGCCAGCTGGAGGGCAGGGCTaGAACCCTGATCCTCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SCLQQAGHGPPLSSTLRPAGGQG*NPDPQR Trigger: CCTCTGAGGATCAGGGTTCCAGCCCTGCCCTCCAGC...TGGCCTGAGTGTGGAGGACAAAGGAGGTCCATGTCCTGCTTGCTGGAGACAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS-3UTR TCA 90 bp | AGCTGTCTCCAGCAAGCAGGACATGGACCTCCTTTGTCCTCCACACTCAGGCCACTAGGACCAAGCATCTaGGCCTGTGAGGGGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SCLQQAGHGPPLSSTLRPLGPSI*ACEGLP Trigger: TGGCAGCCCCTCACAGGCTCAGATGCTTGGTCCTAG...TGGCCTGAGTGTGGAGGACAAAGGAGGTCCATGTCCTGCTTGCTGGAGACAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS-3UTR CCA 90 bp | GTCCTCCACACTCAGGCCACCCCGTACTCAGAGCAGCTCAGCCTGTGCTCTGCAGCTCTGCAGGTTCAGTaGATTGTGTCCAGTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VLHTQATPYSEQLSLCSAALQVQ*IVSSVQ Trigger: CTGGACACTGGACACAATCCACTGAACCTGCAGAGC...TGCAGAGCACAGGCTGAGCTGCTCTGAGTACGGGGTGGCCTGAGTGTGGAGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS-3UTR CCA 90 bp | GTCCTCCACACTCAGGCCACCCCGTACTCAGAGCAGCTCAGCCTGTGCTCTGCAGGACAGGCAGGGTTCTaGAGACACAGAAAGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLHTQATPYSEQLSLCSAGQAGF*RHRKTL Trigger: CAGAGTCTTTCTGTGTCTCCAGAACCCTGCCTGTCC...TGCAGAGCACAGGCTGAGCTGCTCTGAGTACGGGGTGGCCTGAGTGTGGAGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS-3UTR TCA 90 bp | GAAGAGGCAGATAAAGGCACTTCCAAGGCAGCCCAAATCCACACCGCAGGGTGCCCCACTACTCATGGCTaGTCCCAGGCTAGGACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: EEADKGTSKAAQIHTAGCPTTHG*SQARTK Trigger: CTTGGTCCTAGCCTGGGATCAGCCATGAGTAGTGGG...GCACCCTGCGGTGTGGATTTGGGCTGCCTTGGAAGTGCCTTTATCTGCCTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS-3UTR TCA 90 bp | CTCCAGCAAGCAGGACATGGACCTCCTTTGTCCTCCACACTCAGGCCACCCCGTCCCAAGGTTTTCAGGTaGGATCAGAGGTCCAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LQQAGHGPPLSSTLRPPRPKVFR*DQRSRT Trigger: TGTCCTGGACCTCTGATCTCACCTGAAAACCTTGGG...ACGGGGTGGCCTGAGTGTGGAGGACAAAGGAGGTCCATGTCCTGCTTGCTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS-3UTR GCA 90 bp | CAAGCAGGACATGGACCTCCTTTGTCCTCCACACTCAGGCCACCCCGTACTCAGCTGGGGACATCTGCATaGCAGGACATGCTTGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QAGHGPPLSSTLRPPRTQLGTSA*QDMLEV Trigger: CACCTCAAGCATGTCCTGGCATGCAGATGTCCCCAG...CTGAGTACGGGGTGGCCTGAGTGTGGAGGACAAAGGAGGTCCATGTCCTGCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS-3UTR GCA 90 bp | CTCCAGCAAGCAGGACATGGACCTCCTTTGTCCTCCACACTCAGGCCACCCCGTCCTTCCAGGTCTTCCTaGCAAAGTTCAGGACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LQQAGHGPPLSSTLRPPRPSRSS*QSSGQP Trigger: TGGCTGTCCTGAACTTTGGCAGGAAGACCTGGAAGG...ACGGGGTGGCCTGAGTGTGGAGGACAAAGGAGGTCCATGTCCTGCTTGCTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS-3UTR TCA 90 bp | CTCCAGCAAGCAGGACATGGACCTCCTTTGTCCTCCACACTCAGGCCACCCCGTGACACAGAAAGACTCTaGTACACTTTAGTCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LQQAGHGPPLSSTLRPPRDTERL*YTLVSS Trigger: AGAGCTGACTAAAGTGTATCAGAGTCTTTCTGTGTC...ACGGGGTGGCCTGAGTGTGGAGGACAAAGGAGGTCCATGTCCTGCTTGCTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS TCA 90 bp | CGAGGGCCGACGGGTGGCGTAGCAAGGGCAGGAACCGGACGAATCTaGGGACGAGGCCGGAGACGTGGAGTCCGATTGCTGAGCCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RGPTGGVARAGTGRI*GRGRRRGVRLLSPA Trigger: GGCTGGGCTCAGCAATCGGACTCCACGTCTCCGGCCTCGTCCTCAGATTCGTCCGGTTCCTGCCCTTGCTACGCCACCCGTCGGCCCTCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS CCA 90 bp | CCACAGGAAGCTGGAGGGCAGGGCTGGAACCCTGATCCTCAGAGGTaGAGAGCACCTCTGCATCGTGGCCCCAGCAGCCCCACTGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PQEAGGQGWNPDPQR*RAPLHRGPSSPTEA Trigger: AGCCTCAGTGGGGCTGCTGGGGCCACGATGCAGAGGTGCTCTCCACCTCTGAGGATCAGGGTTCCAGCCCTGCCCTCCAGCTTCCTGTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS-3UTR CAA 90 bp | CAAGCAGGACATGGACCTCCTTTGTCCTCCACACTCAGGCCACCCCGTACTCAGAGACGTGGAGTCCGATaGCTGAGCCCAGCCCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: QAGHGPPLSSTLRPPRTQRRGVR*LSPAPA Trigger: GGCTGGGGCTGGGCTCAGCAATCGGACTCCACGTCT...CTGAGTACGGGGTGGCCTGAGTGTGGAGGACAAAGGAGGTCCATGTCCTGCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS-3UTR CAA 90 bp | GATTCTGGCCAGCTGTCTCCAGCAAGCAGGACATGGACCTCCTTTGTCCTCCACGAAGCGGCGCAGTTCTaGCAGCGCGCGGGCGAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: DSGQLSPASRTWTSFVLHEAAQF*QRAGEC Trigger: ACACTCGCCCGCGCGCTGCAAGAACTGCGCCGCTTC...GTGGAGGACAAAGGAGGTCCATGTCCTGCTTGCTGGAGACAGCTGGCCAGAATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS TCA 90 bp | CACCCAGGGATCCACGTTGGAGATCCTGTTCCCAAGGTTTTCAGGTaGGATCAGAGGTCCAGGACAAGCAGGCGGGCACCCCCAGGACAC | + |
|
Preference number: 5 (lower is better) Translates to: HPGIHVGDPVPKVFR*DQRSRTSRRAPPGH Trigger: GTGTCCTGGGGGTGCCCGCCTGCTTGTCCTGGACCTCTGATCTCACCTGAAAACCTTGGGAACAGGATCTCCAACGTGGATCCCTGGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS-3UTR CAA 90 bp | CTCCAGCAAGCAGGACATGGACCTCCTTTGTCCTCCACACTCAGGCCACCCCGTGTCCAGTGTCCAGTCTaGTTCCTAGGCTCTGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LQQAGHGPPLSSTLRPPRVQCPV*FLGSGD Trigger: GTCCCCAGAGCCTAGGAACAAGACTGGACACTGGAC...ACGGGGTGGCCTGAGTGTGGAGGACAAAGGAGGTCCATGTCCTGCTTGCTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS TCA 90 bp | GTCTTGTTCCTAGGCTCTGGGGACATCTGCATGCCAGGACATGCTTaGGGTGGTGCCCAGGGAGAGGAGTCAGCGGCTCTTTCTAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VLFLGSGDICMPGHA*GGAQGEESAALSRD Trigger: GTCCCTAGAAAGAGCCGCTGACTCCTCTCCCTGGGCACCACCTCAAGCATGTCCTGGCATGCAGATGTCCCCAGAGCCTAGGAACAAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS CCA 90 bp | ACTGTATTTGGGGACAATAAGGAGGTGTCACCCAGGGATCCACGTTaGAGATCCTGTTCCCAAGGTTTTCAGGTGAGATCAGAGGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TVFGDNKEVSPRDPR*RSCSQGFQVRSEVQ Trigger: CTGGACCTCTGATCTCACCTGAAAACCTTGGGAACAGGATCTCCAACGTGGATCCCTGGGTGACACCTCCTTATTGTCCCCAAATACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS CCA 72 bp | CTCGCTGGCGCTCTGCCGCTGTCCGCCTGCGGGCGCTaGGCGCGTTCGTCGGGGCGCCGTCGCCTGGGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: LAGALPLSACGR*ARSSGRRRLGS Trigger: ACTACCCAGGCGACGGCGCCCCGACGAACGCGCCCAGCGCCCGCAGGCGGACAGCGGCAGAGCGCCAGCGAG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS CCA 72 bp | GCTGGAGGGCAGGGCTGGAACCCTGATCCTCAGAGGTaGAGAGCACCTCTGCATCGTGGCCCCAGCAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: AGGQGWNPDPQR*RAPLHRGPSSP Trigger: GGGGCTGCTGGGGCCACGATGCAGAGGTGCTCTCCACCTCTGAGGATCAGGGTTCCAGCCCTGCCCTCCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS CCA 72 bp | AGGAACCGGACGAATCTGAGGACGAGGCCGGAGACGTaGAGTCCGATTGCTGAGCCCAGCCCCAGCCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RNRTNLRTRPET*SPIAEPSPSPG Trigger: CCCAGGGCTGGGGCTGGGCTCAGCAATCGGACTCCACGTCTCCGGCCTCGTCCTCAGATTCGTCCGGTTCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS GCA 72 bp | GCTGGAACCCTGATCCTCAGAGGTGGAGAGCACCTCTaGATCGTGGCCCCAGCAGCCCCACTGAGGCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: AGTLILRGGEHL*IVAPAAPLRLR Trigger: CCTCAGCCTCAGTGGGGCTGCTGGGGCCACGATGCAGAGGTGCTCTCCACCTCTGAGGATCAGGGTTCCAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS TCA 72 bp | ACGGGTGGCGTAGCAAGGGCAGGAACCGGACGAATCTaGGGACGAGGCCGGAGACGTGGAGTCCGATTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TGGVARAGTGRI*GRGRRRGVRLL Trigger: CAGCAATCGGACTCCACGTCTCCGGCCTCGTCCTCAGATTCGTCCGGTTCCTGCCCTTGCTACGCCACCCGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS CAA 72 bp | CCTAGGCTCTGGGGACATCTGCATGCCAGGACATGCTaGAGGTGGTGCCCAGGGAGAGGAGTCAGCGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PRLWGHLHARTC*RWCPGRGVSGS Trigger: AGAGCCGCTGACTCCTCTCCCTGGGCACCACCTCAAGCATGTCCTGGCATGCAGATGTCCCCAGAGCCTAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS TCA 72 bp | CTAGGCTCTGGGGACATCTGCATGCCAGGACATGCTTaGGGTGGTGCCCAGGGAGAGGAGTCAGCGGCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LGSGDICMPGHA*GGAQGEESAAL Trigger: AAGAGCCGCTGACTCCTCTCCCTGGGCACCACCTCAAGCATGTCCTGGCATGCAGATGTCCCCAGAGCCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS TCA 72 bp | ATCCACGTTGGAGATCCTGTTCCCAAGGTTTTCAGGTaGGATCAGAGGTCCAGGACAAGCAGGCGGGCACCC | + |
|
Preference number: 6 (lower is better) Translates to: IHVGDPVPKVFR*DQRSRTSRRAP Trigger: GGGTGCCCGCCTGCTTGTCCTGGACCTCTGATCTCACCTGAAAACCTTGGGAACAGGATCTCCAACGTGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS CAA 72 bp | TCTGCAGGTTCAGTGGATTGTGTCCAGTGTCCAGTCTaGTTCCTAGGCTCTGGGGACATCTGCATGCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SAGSVDCVQCPV*FLGSGDICMPG Trigger: TCCTGGCATGCAGATGTCCCCAGAGCCTAGGAACAAGACTGGACACTGGACACAATCCACTGAACCTGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS CAA 72 bp | CTGATACACTTTAGTCAGCTCTGCAGGTTCAGTGGATaGTGTCCAGTGTCCAGTCTTGTTCCTAGGCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LIHFSQLCRFSG*CPVSSLVPRLW Trigger: CCAGAGCCTAGGAACAAGACTGGACACTGGACACAATCCACTGAACCTGCAGAGCTGACTAAAGTGTATCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS CAA 90 bp | AGAAAGACTCTGATACACTTTAGTCAGCTCTGCAGGTTCAGTGGATaGTGTCCAGTGTCCAGTCTTGTTCCTAGGCTCTGGGGACATCTG | + |
|
Preference number: 6 (lower is better) Translates to: RKTLIHFSQLCRFSG*CPVSSLVPRLWGHL Trigger: CAGATGTCCCCAGAGCCTAGGAACAAGACTGGACACTGGACACAATCCACTGAACCTGCAGAGCTGACTAAAGTGTATCAGAGTCTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||
| CDS GCA 72 bp | AGACACAGAAAGACTCTGATACACTTTAGTCAGCTCTaGAGGTTCAGTGGATTGTGTCCAGTGTCCAGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: RHRKTLIHFSQL*RFSGLCPVSSL Trigger: AAGACTGGACACTGGACACAATCCACTGAACCTGCAGAGCTGACTAAAGTGTATCAGAGTCTTTCTGTGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107394.3 |
||