RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MESP1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030544

Ensembl transcript IDs: ENSMUST00000032760.6

Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp ACACCAGGCAAAGCTTGTGCCTGCTTCATCTTTAGAGCGTGTACCCTATTGGGCCCGGGATGCCCATGTTaGTATCACTGCCGCCTCTTC +
Preference number: 2 (lower is better)
Translates to: TPGKACACFIFRACTLLGPGCPC*YHCRLF
Trigger: GAAGAGGCGGCAGTGATACCAACATGGGCATCCCGG...GCCCAATAGGGTACACGCTCTAAAGATGAAGCAGGCACAAGCTTTGCCTGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032760.6
3UTR GCA 72 bp CCAGCTCCCACCCCGGGATGCCCATGTTGGTATCACTaGCGCCTCTTCCAGGATCTACTCCCTCCGAAGGTG +
Preference number: 3 (lower is better)
Translates to: PAPTPGCPCWYH*RLFQDLLPPKV
Trigger: CACCTTCGGAGGGAGTAGATCCTGGAAGAGGCGGCAGTGATACCAACATGGGCATCCCGGGGTGGGAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032760.6
3UTR TCA 72 bp CTCCTTCCAAGGAGGGTTGGAATGGTACAGTCTGGATaGGGGCCAGCTCCCACCCCGGGATGCCCATGTTGG +
Preference number: 3 (lower is better)
Translates to: LLPRRVGMVQSG*GPAPTPGCPCW
Trigger: CCAACATGGGCATCCCGGGGTGGGAGCTGGCCCTCATCCAGACTGTACCATTCCAACCCTCCTTGGAAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032760.6
3UTR GCA 72 bp ACTGCCGCCTCTTCCAGGATCTACTCCCTCCGAAGGTaGCAAGACCAAAGGAAAAGTGTCTGTGCTCAGACA +
Preference number: 3 (lower is better)
Translates to: TAASSRIYSLRR*QDQRKSVCAQT
Trigger: TGTCTGAGCACAGACACTTTTCCTTTGGTCTTGGCACCTTCGGAGGGAGTAGATCCTGGAAGAGGCGGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032760.6
3UTR GCA 72 bp CCTCCGAAGGTGCCAAGACCAAAGGAAAAGTGTCTGTaGTCAGACAGGGTGACAATCATCCGTTGCATTGTC +
Preference number: 3 (lower is better)
Translates to: PPKVPRPKEKCL*SDRVTIIRCIV
Trigger: GACAATGCAACGGATGATTGTCACCCTGTCTGAGCACAGACACTTTTCCTTTGGTCTTGGCACCTTCGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032760.6
CDS-3UTR CCA 90 bp TGCCGCCTCTTCCAGGATCTACTCCCTCCGAAGGTGCCAAGACCAAAGGAAAAGGCAGGGCTGCTGGCCTaGGCACCGTCCCACGGGTCC +
Preference number: 4 (lower is better)
Translates to: CRLFQDLLPPKVPRPKEKAGLLA*APSHGS
Trigger: GGACCCGTGGGACGGTGCCCAGGCCAGCAGCCCTGC...CTTTTCCTTTGGTCTTGGCACCTTCGGAGGGAGTAGATCCTGGAAGAGGCGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032760.6
CDS-3UTR GCA 90 bp CTGCCGCCTCTTCCAGGATCTACTCCCTCCGAAGGTGCCAAGACCAAAGGAAAAAAGCGGCGCAGCTCGTaGAGCGCGCGGGCGAGTGTG +
Preference number: 4 (lower is better)
Translates to: LPPLPGSTPSEGAKTKGKKRRSS*SARASV
Trigger: CACACTCGCCCGCGCGCTGCACGAGCTGCGCCGCTT...TTTTCCTTTGGTCTTGGCACCTTCGGAGGGAGTAGATCCTGGAAGAGGCGGCAG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000032760.6
CDS-3UTR CCA 90 bp GCCGCCTCTTCCAGGATCTACTCCCTCCGAAGGTGCCAAGACCAAAGGAAAAGTGTGGTGCAGGGCTGCTaGCCTGGGCACCGTCCCACG +
Preference number: 4 (lower is better)
Translates to: AASSRIYSLRRCQDQRKSVVQGC*PGHRPT
Trigger: CGTGGGACGGTGCCCAGGCCAGCAGCCCTGCACCAC...ACTTTTCCTTTGGTCTTGGCACCTTCGGAGGGAGTAGATCCTGGAAGAGGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032760.6
3UTR CAA 72 bp TGGATGAGGGCCAGCTCCCACCCCGGGATGCCCATGTaGGTATCACTGCCGCCTCTTCCAGGATCTACTCCC +
Preference number: 4 (lower is better)
Translates to: WMRASSHPGMPM*VSLPPLPGSTP
Trigger: GGGAGTAGATCCTGGAAGAGGCGGCAGTGATACCAACATGGGCATCCCGGGGTGGGAGCTGGCCCTCATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032760.6
CDS-3UTR GCA 90 bp TACTCCCTCCGAAGGTGCCAAGACCAAAGGAAAAGTGTCTGTGCTCAGACAGGGAGGGTGGTGCAGGGCTaGTGGCCTGGGCACCGTCCC +
Preference number: 4 (lower is better)
Translates to: YSLRRCQDQRKSVCAQTGRVVQG*WPGHRP
Trigger: GGGACGGTGCCCAGGCCAGCAGCCCTGCACCACCCT...CCCTGTCTGAGCACAGACACTTTTCCTTTGGTCTTGGCACCTTCGGAGGGAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032760.6
CDS-3UTR GCA 90 bp CTGCCGCCTCTTCCAGGATCTACTCCCTCCGAAGGTGCCAAGACCAAAGGAAAAGCAGGCGGCCACTCCTaGGGCGGCGTCCAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: LPPLPGSTPSEGAKTKGKAGGHS*GGVQVS
Trigger: AGAAACCTGGACGCCGCCGCAGGAGTGGCCGCCTGC...TTTTCCTTTGGTCTTGGCACCTTCGGAGGGAGTAGATCCTGGAAGAGGCGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032760.6
3UTR CAA 72 bp GCGTGTACCCTATTGGGCGCCTCCTTCCAAGGAGGGTaGGAATGGTACAGTCTGGATGAGGGCCAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: ACTLLGASFQGG*EWYSLDEGQLP
Trigger: TGGGAGCTGGCCCTCATCCAGACTGTACCATTCCAACCCTCCTTGGAAGGAGGCGCCCAATAGGGTACACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032760.6
CDS-3UTR GCA 90 bp ACACACCAGGCAAAGCTTGTGCCTGCTTCATCTTTAGAGCGTGTACCCTATTGGCGCTCGCTGGCGCTCTaGCGCTGTCCGCTACCCAGG +
Preference number: 4 (lower is better)
Translates to: THQAKLVPASSLERVPYWRSLAL*RCPLPR
Trigger: CCTGGGTAGCGGACAGCGGCAGAGCGCCAGCGAGCG...CCAATAGGGTACACGCTCTAAAGATGAAGCAGGCACAAGCTTTGCCTGGTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032760.6
CDS-3UTR CCA 90 bp TCCAGGATCTACTCCCTCCGAAGGTGCCAAGACCAAAGGAAAAGTGTCTGTGCTGTCCGAGGACCAGGCTaGGGAGCAGACGCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: SRIYSLRRCQDQRKSVCAVRGPG*GADAVP
Trigger: GGGAACAGCGTCTGCTCCCCAGCCTGGTCCTCGGAC...AGCACAGACACTTTTCCTTTGGTCTTGGCACCTTCGGAGGGAGTAGATCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032760.6
CDS-3UTR TCA 90 bp CTGCCGCCTCTTCCAGGATCTACTCCCTCCGAAGGTGCCAAGACCAAAGGAAAAGCTGAAGAGCGGAGATaGGGGACTGGGCTCCATTTC +
Preference number: 4 (lower is better)
Translates to: LPPLPGSTPSEGAKTKGKAEERR*GTGLHF
Trigger: GAAATGGAGCCCAGTCCCTCATCTCCGCTCTTCAGC...TTTTCCTTTGGTCTTGGCACCTTCGGAGGGAGTAGATCCTGGAAGAGGCGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032760.6
CDS-3UTR CCA 90 bp ACACACCAGGCAAAGCTTGTGCCTGCTTCATCTTTAGAGCGTGTACCCTATTGGGCGGAGATGAGGGACTaGGCTCCATTTCCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: THQAKLVPASSLERVPYWAEMRD*APFPAF
Trigger: AAAGGCAGGAAATGGAGCCCAGTCCCTCATCTCCGC...CCAATAGGGTACACGCTCTAAAGATGAAGCAGGCACAAGCTTTGCCTGGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032760.6
CDS-3UTR GCA 90 bp ACACACCAGGCAAAGCTTGTGCCTGCTTCATCTTTAGAGCGTGTACCCTATTGGCTGGGATGCTGTTTCTaGGTACAGGAACGATGGGTC +
Preference number: 4 (lower is better)
Translates to: THQAKLVPASSLERVPYWLGCCF*VQERWV
Trigger: GACCCATCGTTCCTGTACGCAGAAACAGCATCCCAG...CCAATAGGGTACACGCTCTAAAGATGAAGCAGGCACAAGCTTTGCCTGGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032760.6
CDS-3UTR CCA 90 bp CTCTTCCAGGATCTACTCCCTCCGAAGGTGCCAAGACCAAAGGAAAAGTGTCTGATTTCCTGCCTTTCCTaGGATGCTGTTTCTGCGTAC +
Preference number: 4 (lower is better)
Translates to: LFQDLLPPKVPRPKEKCLISCLS*DAVSAY
Trigger: GTACGCAGAAACAGCATCCCAGGAAAGGCAGGAAAT...CAGACACTTTTCCTTTGGTCTTGGCACCTTCGGAGGGAGTAGATCCTGGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032760.6
CDS GCA 90 bp CCTACCCGGGGTCCCAGCACGCCGGGCCGGGCGGGCGCAGGGTGGTaGAGGGCTGCTGGCCTGGGCACCGTCCCACGGGTCCGAGGACCA +
Preference number: 5 (lower is better)
Translates to: PTRGPSTPGRAGAGW*RAAGLGTVPRVRGP
Trigger: TGGTCCTCGGACCCGTGGGACGGTGCCCAGGCCAGCAGCCCTGCACCACCCTGCGCCCGCCCGGCCCGGCGTGCTGGGACCCCGGGTAGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032760.6
CDS CCA 90 bp GCACGCCGGGCCGGGCGGGCGCAGGGTGGTGCAGGGCTGCTGGCCTaGGCACCGTCCCACGGGTCCGAGGACCAGGCTGGGGAGCAGACG +
Preference number: 5 (lower is better)
Translates to: ARRAGRAQGGAGLLA*APSHGSEDQAGEQT
Trigger: CGTCTGCTCCCCAGCCTGGTCCTCGGACCCGTGGGACGGTGCCCAGGCCAGCAGCCCTGCACCACCCTGCGCCCGCCCGGCCCGGCGTGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032760.6
CDS CCA 90 bp TCCCAGCACGCCGGGCCGGGCGGGCGCAGGGTGGTGCAGGGCTGCTaGCCTGGGCACCGTCCCACGGGTCCGAGGACCAGGCTGGGGAGC +
Preference number: 5 (lower is better)
Translates to: SQHAGPGGRRVVQGC*PGHRPTGPRTRLGS
Trigger: GCTCCCCAGCCTGGTCCTCGGACCCGTGGGACGGTGCCCAGGCCAGCAGCCCTGCACCACCCTGCGCCCGCCCGGCCCGGCGTGCTGGGA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032760.6
CDS TCA 90 bp CCTGCGGCGGCGTCCAGGTTTCTAGAAGAGCCAGCATGTCGCTGCTaGAGAGCGGAGATGAGGGACTGGGCTCCATTTCCTGCCTTTCCT +
Preference number: 5 (lower is better)
Translates to: PAAASRFLEEPACRC*RAEMRDWAPFPAFP
Trigger: AGGAAAGGCAGGAAATGGAGCCCAGTCCCTCATCTCCGCTCTTCAGCAGCGACATGCTGGCTCTTCTAGAAACCTGGACGCCGCCGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032760.6
CDS CCA 90 bp CATTTCCTGCCTTTCCTGGGATGCTGTTTCTGCGTACAGGAACGATaGGTCCCACGATTCTGCGGCGACTCGGGGTCTAGGGTAGGCAGG +
Preference number: 5 (lower is better)
Translates to: HFLPFLGCCFCVQER*VPRFCGDSGSRVGR
Trigger: CCTGCCTACCCTAGACCCCGAGTCGCCGCAGAATCGTGGGACCCATCGTTCCTGTACGCAGAAACAGCATCCCAGGAAAGGCAGGAAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032760.6
CDS CCA 90 bp CTGAAGAGCGGAGATGAGGGACTGGGCTCCATTTCCTGCCTTTCCTaGGATGCTGTTTCTGCGTACAGGAACGATGGGTCCCACGATTCT +
Preference number: 5 (lower is better)
Translates to: LKSGDEGLGSISCLS*DAVSAYRNDGSHDS
Trigger: AGAATCGTGGGACCCATCGTTCCTGTACGCAGAAACAGCATCCCAGGAAAGGCAGGAAATGGAGCCCAGTCCCTCATCTCCGCTCTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032760.6
CDS CCA 72 bp GCCGGGCGGGCGCAGGGTGGTGCAGGGCTGCTGGCCTaGGCACCGTCCCACGGGTCCGAGGACCAGGCTGGG +
Preference number: 6 (lower is better)
Translates to: AGRAQGGAGLLA*APSHGSEDQAG
Trigger: CCCAGCCTGGTCCTCGGACCCGTGGGACGGTGCCCAGGCCAGCAGCCCTGCACCACCCTGCGCCCGCCCGGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032760.6
CDS GCA 72 bp CTGCAGACGGCCGGGCTTAAACGGGGACCGAGCGACTaGGACTGCGCCAGGTCGCTGTCGGGGCACAGCGGG +
Preference number: 6 (lower is better)
Translates to: LQTAGLKRGPSD*DCARSLSGHSG
Trigger: CCCGCTGTGCCCCGACAGCGACCTGGCGCAGTCGCAGTCGCTCGGTCCCCGTTTAAGCCCGGCCGTCTGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032760.6
CDS CCA 72 bp GGCCTGGGCACCGTCCCACGGGTCCGAGGACCAGGCTaGGGAGCAGACGCTGTTCCCATCGGAAGGCATCGG +
Preference number: 6 (lower is better)
Translates to: GLGTVPRVRGPG*GADAVPIGRHR
Trigger: CCGATGCCTTCCGATGGGAACAGCGTCTGCTCCCCAGCCTGGTCCTCGGACCCGTGGGACGGTGCCCAGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032760.6
CDS GCA 72 bp GGTGCCACGGATGGCGGCAAGAAGCGGCGCAGCTCGTaGAGCGCGCGGGCGAGTGTGCGCATACGTAGCTTC +
Preference number: 6 (lower is better)
Translates to: GATDGGKKRRSS*SARASVRIRSF
Trigger: GAAGCTACGTATGCGCACACTCGCCCGCGCGCTGCACGAGCTGCGCCGCTTCTTGCCGCCATCCGTGGCACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032760.6
CDS CCA 72 bp CCTTTCCTGGGATGCTGTTTCTGCGTACAGGAACGATaGGTCCCACGATTCTGCGGCGACTCGGGGTCTAGG +
Preference number: 6 (lower is better)
Translates to: PFLGCCFCVQER*VPRFCGDSGSR
Trigger: CCTAGACCCCGAGTCGCCGCAGAATCGTGGGACCCATCGTTCCTGTACGCAGAAACAGCATCCCAGGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032760.6
CDS GCA 72 bp GGGCTCCATTTCCTGCCTTTCCTGGGATGCTGTTTCTaGGTACAGGAACGATGGGTCCCACGATTCTGCGGC +
Preference number: 6 (lower is better)
Translates to: GLHFLPFLGCCF*VQERWVPRFCG
Trigger: GCCGCAGAATCGTGGGACCCATCGTTCCTGTACGCAGAAACAGCATCCCAGGAAAGGCAGGAAATGGAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032760.6
CDS CCA 72 bp GGAGATGAGGGACTGGGCTCCATTTCCTGCCTTTCCTaGGATGCTGTTTCTGCGTACAGGAACGATGGGTCC +
Preference number: 6 (lower is better)
Translates to: GDEGLGSISCLS*DAVSAYRNDGS
Trigger: GGACCCATCGTTCCTGTACGCAGAAACAGCATCCCAGGAAAGGCAGGAAATGGAGCCCAGTCCCTCATCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032760.6