Pregenerated sensors for MESD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038503Ensembl transcript IDs: ENSMUST00000094215.10, ENSMUST00000130103.2, ENSMUST00000153377.2
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACCTGCCCCACCAGTCTGCGAGGGGCTATCTGGTCCTGCCTACCTaGCGGGAAGCTTGCCACCTGCTAAAGGTCTTCTCTTCTGCTCCC | + |
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Preference number: 1 (lower is better) Translates to: HLPHQSARGYLVLPT*REACHLLKVFSSAP Trigger: GGGAGCAGAAGAGAAGACCTTTAGCAGGTGGCAAGCTTCCCGCCAGGTAGGCAGGACCAGATAGCCCCTCGCAGACTGGTGGGGCAGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153377.2 |
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| 3UTR GCA 90 bp | ATGTCATCTGCTATGCAGTTTCCTGCACCACCTGCCCCACCAGTCTaGGAGGGGCTATCTGGTCCTGCCTACCTGGCGGGAAGCTTGCCA | + |
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Preference number: 1 (lower is better) Translates to: MSSAMQFPAPPAPPV*EGLSGPAYLAGSLP Trigger: TGGCAAGCTTCCCGCCAGGTAGGCAGGACCAGATAGCCCCTCGCAGACTGGTGGGGCAGGTGGTGCAGGAAACTGCATAGCAGATGACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR GCA 90 bp | CAGTCTGCGAGGGGCTATCTGGTCCTGCCTACCTGGCGGGAAGCTTaGCACCTGCTAAAGGTCTTCTCTTCTGCTCCCAGCTCGATTGTC | + |
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Preference number: 1 (lower is better) Translates to: QSARGYLVLPTWREA*HLLKVFSSAPSSIV Trigger: GACAATCGAGCTGGGAGCAGAAGAGAAGACCTTTAGCAGGTGGCAAGCTTCCCGCCAGGTAGGCAGGACCAGATAGCCCCTCGCAGACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153377.2 |
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| 3UTR GCA 90 bp | AGAGGACATGAGAATGTCATCTGCTATGCAGTTTCCTGCACCACCTaGCCCACCAGTCTGCGAGGGGCTATCTGGTCCTGCCTACCTGGC | + |
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Preference number: 1 (lower is better) Translates to: RGHENVICYAVSCTT*PTSLRGAIWSCLPG Trigger: GCCAGGTAGGCAGGACCAGATAGCCCCTCGCAGACTGGTGGGGCAGGTGGTGCAGGAAACTGCATAGCAGATGACATTCTCATGTCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR GCA 90 bp | GGACACTGGACTGAAGCAGTTGTGCTGTCCAGATGCCCCTGCAGTTaGTGTAACAGGGGCCGTCCTCCTGAGAACAGGAGACTACAGTGC | + |
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Preference number: 1 (lower is better) Translates to: GHWTEAVVLSRCPCS*CNRGRPPENRRLQC Trigger: GCACTGTAGTCTCCTGTTCTCAGGAGGACGGCCCCTGTTACAGCAACTGCAGGGGCATCTGGACAGCACAACTGCTTCAGTCCAGTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR CCA 90 bp | ATTTCCAGTGGTGGAGCTCCCAGGAGCCCTGAGGTAGCTTCCCCATaGACAGATGGCTGGCCAAGGAGCAGACTGTCCTCACTTGAAAGA | + |
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Preference number: 1 (lower is better) Translates to: ISSGGAPRSPEVASP*TDGWPRSRLSSLER Trigger: TCTTTCAAGTGAGGACAGTCTGCTCCTTGGCCAGCCATCTGTCCATGGGGAAGCTACCTCAGGGCTCCTGGGAGCTCCACCACTGGAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR TCA 90 bp | CAGAACGTGGGCCCTCAGTGGAAGCATCCTTCTTTCCTCACACGATaGACAAGCGCATTCCCTCTTCAACTCCAGGAGACGGGGAGACAA | + |
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Preference number: 1 (lower is better) Translates to: QNVGPQWKHPSFLTR*TSAFPLQLQETGRQ Trigger: TTGTCTCCCCGTCTCCTGGAGTTGAAGAGGGAATGCGCTTGTTCATCGTGTGAGGAAAGAAGGATGCTTCCACTGAGGGCCCACGTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR TCA 90 bp | GACGCCCTGAGCTGGGGAGGGAGGTGTGGCTTGGTAAGAGAAACATaGACGGAAACCAACTGGAGGACAGAATATACCCATCACTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: DALSWGGRCGLVRET*TETNWRTEYTHHWR Trigger: CCTCCAGTGATGGGTATATTCTGTCCTCCAGTTGGTTTCCGTTCATGTTTCTCTTACCAAGCCACACCTCCCTCCCCAGCTCAGGGCGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR CCA 90 bp | GTTTCAGACGTAGCTGAGGCTATCCTGCAACTAAGTAACCTGGCCTaGCTGATCCTCCCATCTCTCCCTCCCAAACACTGGGATTACAGG | + |
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Preference number: 1 (lower is better) Translates to: VSDVAEAILQLSNLA*LILPSLPPKHWDYR Trigger: CCTGTAATCCCAGTGTTTGGGAGGGAGAGATGGGAGGATCAGCCAGGCCAGGTTACTTAGTTGCAGGATAGCCTCAGCTACGTCTGAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR CCA 90 bp | CTATGCAAGACTCTGCTGGTCCCTCCTCGCCAACTTTATAGTTGTTaGGCTATGCAGAACGTGGGCCCTCAGTGGAAGCATCCTTCTTTC | + |
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Preference number: 1 (lower is better) Translates to: LCKTLLVPPRQLYSC*AMQNVGPQWKHPSF Trigger: GAAAGAAGGATGCTTCCACTGAGGGCCCACGTTCTGCATAGCCCAACAACTATAAAGTTGGCGAGGAGGGACCAGCAGAGTCTTGCATAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR TCA 90 bp | ACCCGCGCTTCAGTCAAGTTGAAGCTTCTCAAGGCTTGTCTGACTTaGGCTTGTAATACACAGATACAACAGGCCATGGGACCACAGCAG | + |
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Preference number: 1 (lower is better) Translates to: TRASVKLKLLKACLT*ACNTQIQQAMGPQQ Trigger: CTGCTGTGGTCCCATGGCCTGTTGTATCTGTGTATTACAAGCTCAAGTCAGACAAGCCTTGAGAAGCTTCAACTTGACTGAAGCGCGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR TCA 90 bp | TCCCGTGTCAGCATCATGAAGGCTTCCAGAAGGAAACGGCAGCCCTaGGAAAAGAGCATCATGGCTAGACATGACAGTAGCCAATCAACT | + |
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Preference number: 1 (lower is better) Translates to: SRVSIMKASRRKRQP*EKSIMARHDSSQST Trigger: AGTTGATTGGCTACTGTCATGTCTAGCCATGATGCTCTTTTCTCAGGGCTGCCGTTTCCTTCTGGAAGCCTTCATGATGCTGACACGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR CCA 90 bp | GTCTTCTCTTCTGCTCCCAGCTCGATTGTCTTCCTTGGAAGCACGTaGTTTGGGATCTCCCTCCTTCTTTTTAGCCTTCTCTGGCTTTGT | + |
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Preference number: 1 (lower is better) Translates to: VFSSAPSSIVFLGST*FGISLLLFSLLWLC Trigger: ACAAAGCCAGAGAAGGCTAAAAAGAAGGAGGGAGATCCCAAACCACGTGCTTCCAAGGAAGACAATCGAGCTGGGAGCAGAAGAGAAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153377.2 |
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| 3UTR GCA 90 bp | ATTATGCATTTCTTCCTTTCTCCTCACAGTCAGTCATTCCTGCCATaGCTGCACTGTCCTCAGAACCCACCAGTGACAACTACATCACAG | + |
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Preference number: 1 (lower is better) Translates to: IMHFFLSPHSQSFLP*LHCPQNPPVTTTSQ Trigger: CTGTGATGTAGTTGTCACTGGTGGGTTCTGAGGACAGTGCAGGCATGGCAGGAATGACTGACTGTGAGGAGAAAGGAAGAAATGCATAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR GCA 90 bp | GGAAATGCCACATGTGATGGCCAAGGCTGTCAAGGATCACAGACCTaGTGGGAAGTCTCAAATGACAGAACTATCAGGAGCAGCTATTTA | + |
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Preference number: 1 (lower is better) Translates to: GNATCDGQGCQGSQT*WEVSNDRTIRSSYL Trigger: TAAATAGCTGCTCCTGATAGTTCTGTCATTTGAGACTTCCCAGCAGGTCTGTGATCCTTGACAGCCTTGGCCATCACATGTGGCATTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR CCA 90 bp | AATGCCACATGTGATGGCCAAGGCTGTCAAGGATCACAGACCTGCTaGGAAGTCTCAAATGACAGAACTATCAGGAGCAGCTATTTAGCA | + |
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Preference number: 1 (lower is better) Translates to: NATCDGQGCQGSQTC*EVSNDRTIRSSYLA Trigger: TGCTAAATAGCTGCTCCTGATAGTTCTGTCATTTGAGACTTCCCAGCAGGTCTGTGATCCTTGACAGCCTTGGCCATCACATGTGGCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR TCA 90 bp | TGGCCAAGGCTGTCAAGGATCACAGACCTGCTGGGAAGTCTCAAATaGCAGAACTATCAGGAGCAGCTATTTAGCAATATATACCAAATG | + |
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Preference number: 1 (lower is better) Translates to: WPRLSRITDLLGSLK*QNYQEQLFSNIYQM Trigger: CATTTGGTATATATTGCTAAATAGCTGCTCCTGATAGTTCTGTCATTTGAGACTTCCCAGCAGGTCTGTGATCCTTGACAGCCTTGGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR TCA 90 bp | AGTCTGGGTACAAGTGACTTTAATAGACTTTCATTCTACTTGATTTaGCTCATAAAAAGCAGCAGTAGGGCCTCCTGGCTTCTTGTGCTT | + |
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Preference number: 1 (lower is better) Translates to: SLGTSDFNRLSFYLI*LIKSSSRASWLLVL Trigger: AAGCACAAGAAGCCAGGAGGCCCTACTGCTGCTTTTTATGAGTCAAATCAAGTAGAATGAAAGTCTATTAAAGTCACTTGTACCCAGACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR TCA 90 bp | TCAAGAGAAATAAAAGGTACAAAACATCAAGTTTCCAAAGTCAGGTaGAGCCACAGTAGACATGACTTGCCAGTCCACTACCAATCACAA | + |
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Preference number: 1 (lower is better) Translates to: SREIKGTKHQVSKVR*SHSRHDLPVHYQSQ Trigger: TTGTGATTGGTAGTGGACTGGCAAGTCATGTCTACTGTGGCTTCACCTGACTTTGGAAACTTGATGTTTTGTACCTTTTATTTCTCTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR TCA 90 bp | TTTTGCTTATTTCGTCTCATTTTGAGTGTCTCATGTAATACAATCTaGTCTGGAACTTCTGATCTTGCTTCTGCTTCCTCAGTGTTGGGC | + |
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Preference number: 1 (lower is better) Translates to: FCLFRLILSVSCNTI*SGTSDLASASSVLG Trigger: GCCCAACACTGAGGAAGCAGAAGCAAGATCAGAAGTTCCAGATCAGATTGTATTACATGAGACACTCAAAATGAGACGAAATAAGCAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR-3UTR TCA 90 bp | ACCACCTGCCCCACCAGTCTGCGAGGGGCTATCTGGTCCTGCCTACCTGGCGGGGAAGTCGATAGGTGCTaGGGGTCTCTTGTGTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: TTCPTSLRGAIWSCLPGGEVDRC*GSLVFW Trigger: CCAGAACACAAGAGACCCTCAGCACCTATCGACTTC...CCCGCCAGGTAGGCAGGACCAGATAGCCCCTCGCAGACTGGTGGGGCAGGTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000153377.2 |
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| 3UTR-3UTR CCA 90 bp | CCACCAGTCTGCGAGGGGCTATCTGGTCCTGCCTACCTGGCGGGAAGCTTGCCAGCACTGAGGAGGGAGTaGTACTCTGGGGGTGTCATG | + |
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Preference number: 2 (lower is better) Translates to: PPVCEGLSGPAYLAGSLPALRRE*YSGGVM Trigger: CATGACACCCCCAGAGTACCACTCCCTCCTCAGTGC...TGGCAAGCTTCCCGCCAGGTAGGCAGGACCAGATAGCCCCTCGCAGACTGGTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR-3UTR TCA 90 bp | CCACCAGTCTGCGAGGGGCTATCTGGTCCTGCCTACCTGGCGGGAAGCTTGCCACGTCATAGTTGGCGTTaGACAGGCTACCCTGCCACA | + |
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Preference number: 2 (lower is better) Translates to: PPVCEGLSGPAYLAGSLPRHSWR*TGYPAT Trigger: TGTGGCAGGGTAGCCTGTTCAACGCCAACTATGACG...TGGCAAGCTTCCCGCCAGGTAGGCAGGACCAGATAGCCCCTCGCAGACTGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153377.2 |
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| 3UTR CAA 90 bp | CCAGTCTGCGAGGGGCTATCTGGTCCTGCCTACCTGGCGGGAAGCTaGCCACCTGCTAAAGGTCTTCTCTTCTGCTCCCAGCTCGATTGT | + |
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Preference number: 2 (lower is better) Translates to: PVCEGLSGPAYLAGS*PPAKGLLFCSQLDC Trigger: ACAATCGAGCTGGGAGCAGAAGAGAAGACCTTTAGCAGGTGGCAAGCTTCCCGCCAGGTAGGCAGGACCAGATAGCCCCTCGCAGACTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153377.2 |
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| 3UTR-3UTR GCA 90 bp | GATGAGTGCCCTGTCCCAGCTTCTCCTAGATTGGCAGCACCCTCAAACAGGACACCTGCCCCACCAGTCTaGGAGGGGCTATCTGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: DECPVPASPRLAAPSNRTPAPPV*EGLSGP Trigger: AGGACCAGATAGCCCCTCGCAGACTGGTGGGGCAGG...TGTCCTGTTTGAGGGTGCTGCCAATCTAGGAGAAGCTGGGACAGGGCACTCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR-3UTR GCA 90 bp | ACCACCTGCCCCACCAGTCTGCGAGGGGCTATCTGGTCCTGCCTACCTGGCGGGAAAGGTCTTCTCTTCTaGTCCCAGCTCGATTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: TTCPTSLRGAIWSCLPGGKGLLF*SQLDCL Trigger: AAGACAATCGAGCTGGGAGCAGAAGAGAAGACCTTT...CCCGCCAGGTAGGCAGGACCAGATAGCCCCTCGCAGACTGGTGGGGCAGGTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153377.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTGTCTCCTTCTCGGTGGGGTTCCCAGACACGGTGACAAACATCATCAGAGTCTGCGAGGGGCTATCTaGTCCTGCCTACCTGGCGGG | + |
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Preference number: 2 (lower is better) Translates to: LCLLLGGVPRHGDKHHQSLRGAI*SCLPGG Trigger: CCCGCCAGGTAGGCAGGACCAGATAGCCCCTCGCAG...ACTCTGATGATGTTTGTCACCGTGTCTGGGAACCCCACCGAGAAGGAGACAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153377.2 |
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| 3UTR-3UTR CCA 90 bp | TGCACCACCTGCCCCACCAGTCTGCGAGGGGCTATCTGGTCCTGCCTACCTGGCGGAGTCAACGGGTACTaGGAGACATTTCAAGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: CTTCPTSLRGAIWSCLPGGVNGY*ETFQER Trigger: TCTTTCTTGAAATGTCTCCCAGTACCCGTTGACTCC...GCCAGGTAGGCAGGACCAGATAGCCCCTCGCAGACTGGTGGGGCAGGTGGTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153377.2 |
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| 3UTR-3UTR CCA 90 bp | ACCAACAGTAGCTTCACTGGGACAAAGTACTGGCAGCAGGGTAGGGCAATTCTTCTGCGAGGGGCTATCTaGTCCTGCCTACCTGGCGGG | + |
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Preference number: 2 (lower is better) Translates to: TNSSFTGTKYWQQGRAILLRGAI*SCLPGG Trigger: CCCGCCAGGTAGGCAGGACCAGATAGCCCCTCGCAG...AAGAATTGCCCTACCCTGCTGCCAGTACTTTGTCCCAGTGAAGCTACTGTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR-3UTR GCA 90 bp | GATGAGTGCCCTGTCCCAGCTTCTCCTAGATTGGCAGCACCCTCAAACAGGACATGCTATGCAGTTTCCTaGACCACCTGCCCCACCAGT | + |
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Preference number: 2 (lower is better) Translates to: DECPVPASPRLAAPSNRTCYAVS*TTCPTS Trigger: ACTGGTGGGGCAGGTGGTGCAGGAAACTGCATAGCA...TGTCCTGTTTGAGGGTGCTGCCAATCTAGGAGAAGCTGGGACAGGGCACTCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR-3UTR GCA 90 bp | GTCGGATCCCACGATGAACCTCTGAACGTCATAGTTGGCGTTGAACAGGCTACCGGAGGAAGGAGGGAATaGTCTTCAGGAGCGCTCGCT | + |
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Preference number: 2 (lower is better) Translates to: VGSHDEPLNVIVGVEQATGGRRE*SSGALA Trigger: AGCGAGCGCTCCTGAAGAGCATTCCCTCCTTCCTCC...GGTAGCCTGTTCAACGCCAACTATGACGTTCAGAGGTTCATCGTGGGATCCGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153377.2 |
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| 3UTR-3UTR TCA 90 bp | TGGATCTCCAGTGAGGCTAGCCTGGTCTTCATAGGGTGTTCTAAGCCAAAAGAACCACAGCAGGTGCACTaGGGAGGGAGTGGTACTCTG | + |
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Preference number: 2 (lower is better) Translates to: WISSEASLVFIGCSKPKEPQQVH*GGSGTL Trigger: CAGAGTACCACTCCCTCCTCAGTGCACCTGCTGTGG...TTCTTTTGGCTTAGAACACCCTATGAAGACCAGGCTAGCCTCACTGGAGATCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR-3UTR GCA 90 bp | TCATCATCTTTCTTTAGAACCCATTCACTCCAGAACAGGAGGAGGAAGGAGGGACCTGCCCCACCAGTCTaGGAGGGGCTATCTGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: SSSFFRTHSLQNRRRKEGPAPPV*EGLSGP Trigger: AGGACCAGATAGCCCCTCGCAGACTGGTGGGGCAGG...TCCCTCCTTCCTCCTCCTGTTCTGGAGTGAATGGGTTCTAAAGAAAGATGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153377.2 |
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| 3UTR-3UTR TCA 90 bp | ATTTGCTGGGCCCACAGATACCAAAAGGATGAGTGCCCTGTCCCAGCTTCTCCTGCGCTTCAGTCAAGTTaGAGCTTCTCAAGGCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: ICWAHRYQKDECPVPASPALQSS*SFSRLV Trigger: GACAAGCCTTGAGAAGCTTCAACTTGACTGAAGCGC...AGGAGAAGCTGGGACAGGGCACTCATCCTTTTGGTATCTGTGGGCCCAGCAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR-3UTR TCA 90 bp | TGCTCAGAAACGATTTCCAGTGGTGGAGCTCCCAGGAGCCCTGAGGTAGCTTCCGTTATCTTCACTCACTaGACACAGCACTGCTCATAC | + |
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Preference number: 2 (lower is better) Translates to: CSETISSGGAPRSPEVASVIFTH*TQHCSY Trigger: GTATGAGCAGTGCTGTGTTCAGTGAGTGAAGATAAC...GGAAGCTACCTCAGGGCTCCTGGGAGCTCCACCACTGGAAATCGTTTCTGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR-3UTR GCA 90 bp | TTATCTTCACTCACTGAACACAGCACTGCTCATACGGCACAGTTATCTTCACTCGTTTCCTGCACCACCTaGCCCACCAGTCTGCGAGGG | + |
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Preference number: 2 (lower is better) Translates to: LSSLTEHSTAHTAQLSSLVSCTT*PTSLRG Trigger: CCCTCGCAGACTGGTGGGGCAGGTGGTGCAGGAAAC...GAGTGAAGATAACTGTGCCGTATGAGCAGTGCTGTGTTCAGTGAGTGAAGATAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR-3UTR CCA 90 bp | AGCTTCTTTTTGAAGAGGCTCAGCAGGTTGTGTCCAGGACGCCCTGAGCTGGGGCAACTTTATAGTTGTTaGGCTATGCAGAACGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: SFFLKRLSRLCPGRPELGQLYSC*AMQNVG Trigger: GCCCACGTTCTGCATAGCCCAACAACTATAAAGTTG...CCCCAGCTCAGGGCGTCCTGGACACAACCTGCTGAGCCTCTTCAAAAAGAAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR CAA 90 bp | CACAGATACCAAAAGGATGAGTGCCCTGTCCCAGCTTCTCCTAGATaGGCAGCACCCTCAAACAGGACAGCAGCAGATCATCACAAGTCA | + |
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Preference number: 2 (lower is better) Translates to: HRYQKDECPVPASPR*AAPSNRTAADHHKS Trigger: TGACTTGTGATGATCTGCTGCTGTCCTGTTTGAGGGTGCTGCCAATCTAGGAGAAGCTGGGACAGGGCACTCATCCTTTTGGTATCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR-3UTR GCA 90 bp | GATCTTGCTTCTGCTTCCTCAGTGTTGGGCTTACAGGTAAGTTTGGGTGTTAAATGGGACCACAGCAGGTaGACTGAGGAGGGAGTGGTA | + |
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Preference number: 2 (lower is better) Translates to: DLASASSVLGLQVSLGVKWDHSR*TEEGVV Trigger: TACCACTCCCTCCTCAGTGCACCTGCTGTGGTCCCA...TTTAACACCCAAACTTACCTGTAAGCCCAACACTGAGGAAGCAGAAGCAAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR-3UTR GCA 90 bp | CTCTGTCTCCTTCTCGGTGGGGTTCCCAGACACGGTGACAAACATCATCAGAGTCAATGTAGAGACCCCTaGGACATAGCAAGGAAAGTA | + |
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Preference number: 2 (lower is better) Translates to: LCLLLGGVPRHGDKHHQSQCRDP*DIARKV Trigger: TACTTTCCTTGCTATGTCGCAGGGGTCTCTACATTG...ACTCTGATGATGTTTGTCACCGTGTCTGGGAACCCCACCGAGAAGGAGACAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153377.2 |
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| 3UTR CAA 90 bp | TTGTCTACTACTTCTAGCCTCAGGGCCTTTGCAAAGGGAACTCCCTaGACCTCCCAACAAAGCTCTGCCCATTCAGTTCACTGCATTATG | + |
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Preference number: 2 (lower is better) Translates to: LSTTSSLRAFAKGTP*TSQQSSAHSVHCIM Trigger: CATAATGCAGTGAACTGAATGGGCAGAGCTTTGTTGGGAGGTCAAGGGAGTTCCCTTTGCAAAGGCCCTGAGGCTAGAAGTAGTAGACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR-3UTR GCA 90 bp | GATCTTGCTTCTGCTTCCTCAGTGTTGGGCTTACAGGTAAGTTTGGGTGTTAAATCCTATGCAAGACTCTaGTGGTCCCTCCTCGCCAAC | + |
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Preference number: 2 (lower is better) Translates to: DLASASSVLGLQVSLGVKSYARL*WSLLAN Trigger: GTTGGCGAGGAGGGACCAGCAGAGTCTTGCATAGGA...TTTAACACCCAAACTTACCTGTAAGCCCAACACTGAGGAAGCAGAAGCAAGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR-3UTR CCA 90 bp | GATCTTGCTTCTGCTTCCTCAGTGTTGGGCTTACAGGTAAGTTTGGGTGTTAAATTCCCCATGGACAGATaGCTGGCCAAGGAGCAGACT | + |
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Preference number: 2 (lower is better) Translates to: DLASASSVLGLQVSLGVKFPMDR*LAKEQT Trigger: AGTCTGCTCCTTGGCCAGCCATCTGTCCATGGGGAA...TTTAACACCCAAACTTACCTGTAAGCCCAACACTGAGGAAGCAGAAGCAAGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR CAA 90 bp | TCTCTTCTGCTCCCAGCTCGATTGTCTTCCTTGGAAGCACGTGGTTaGGGATCTCCCTCCTTCTTTTTAGCCTTCTCTGGCTTTGTTTTA | + |
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Preference number: 2 (lower is better) Translates to: SLLLPARLSSLEARG*GSPSFFLAFSGFVL Trigger: TAAAACAAAGCCAGAGAAGGCTAAAAAGAAGGAGGGAGATCCCAAACCACGTGCTTCCAAGGAAGACAATCGAGCTGGGAGCAGAAGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153377.2 |
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| 3UTR CAA 90 bp | ATCAGAGTCTTCCCTTTCTTTGTCATTTTCAAGATGCTCTCAGGTTaGCCTGGGTCTAGCTTTGAGAAGTCGATAGGTGCTGAGGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: IRVFPFFVIFKMLSG*PGSSFEKSIGAEGL Trigger: GAGACCCTCAGCACCTATCGACTTCTCAAAGCTAGACCCAGGCAAACCTGAGAGCATCTTGAAAATGACAAAGAAAGGGAAGACTCTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153377.2 |
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| 3UTR-3UTR TCA 90 bp | CTACTTTGGAGCATCTTTCAGAAACTTCTGCATACTCATTCCAAAGACTTAACAGTAACCTGGCCTGGCTaGTCCTCCCATCTCTCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: LLWSIFQKLLHTHSKDLTVTWPG*SSHLSL Trigger: GAGGGAGAGATGGGAGGATCAGCCAGGCCAGGTTAC...TGTTAAGTCTTTGGAATGAGTATGCAGAAGTTTCTGAAAGATGCTCCAAAGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR-3UTR TCA 90 bp | GAACGGAAACCAACTGGAGGACAGAATATACCCATCACTGGAGGACAGAATATAGTTATCTTCACTCACTaGACACAGCACTGCCCATAC | + |
|
Preference number: 2 (lower is better) Translates to: ERKPTGGQNIPITGGQNIVIFTH*TQHCPY Trigger: GTATGGGCAGTGCTGTGTTCAGTGAGTGAAGATAAC...TATATTCTGTCCTCCAGTGATGGGTATATTCTGTCCTCCAGTTGGTTTCCGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR-3UTR TCA 90 bp | CTACTTTGGAGCATCTTTCAGAAACTTCTGCATACTCATTCCAAAGACTTAACACAGGGGACACTGGACTaGAGCAGTTGTGCTGTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: LLWSIFQKLLHTHSKDLTQGTLD*SSCAVQ Trigger: CTGGACAGCACAACTGCTTCAGTCCAGTGTCCCCTG...TGTTAAGTCTTTGGAATGAGTATGCAGAAGTTTCTGAAAGATGCTCCAAAGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR-3UTR GCA 90 bp | CTACTTTGGAGCATCTTTCAGAAACTTCTGCATACTCATTCCAAAGACTTAACACTGTCCAGATGCCCCTaGAGTTGCTGTAACAGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: LLWSIFQKLLHTHSKDLTLSRCP*SCCNRG Trigger: GCCCCTGTTACAGCAACTGCAGGGGCATCTGGACAG...TGTTAAGTCTTTGGAATGAGTATGCAGAAGTTTCTGAAAGATGCTCCAAAGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR-3UTR CCA 90 bp | ACCTGCTGGGAAGTCTCAAATGACAGAACTATCAGGAGCAGCTATTTAGCAATATATGCAAGACTCTGCTaGTCCCTCCTCGCCAACTTT | + |
|
Preference number: 2 (lower is better) Translates to: TCWEVSNDRTIRSSYLAIYARLC*SLLANF Trigger: AAAGTTGGCGAGGAGGGACCAGCAGAGTCTTGCATA...TATTGCTAAATAGCTGCTCCTGATAGTTCTGTCATTTGAGACTTCCCAGCAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR-3UTR TCA 90 bp | ACCTGCTGGGAAGTCTCAAATGACAGAACTATCAGGAGCAGCTATTTAGCAATAGTTATCTTCACTCACTaGACAATCAATACCCGCGCT | + |
|
Preference number: 2 (lower is better) Translates to: TCWEVSNDRTIRSSYLAIVIFTH*TINTRA Trigger: AGCGCGGGTATTGATTGTTCAGTGAGTGAAGATAAC...TATTGCTAAATAGCTGCTCCTGATAGTTCTGTCATTTGAGACTTCCCAGCAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR-3UTR TCA 90 bp | CTACTTTGGAGCATCTTTCAGAAACTTCTGCATACTCATTCCAAAGACTTAACACAGATACCAAAAGGATaGGTGCCCTGTCCCAGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: LLWSIFQKLLHTHSKDLTQIPKG*VPCPSF Trigger: GAAGCTGGGACAGGGCACTCATCCTTTTGGTATCTG...TGTTAAGTCTTTGGAATGAGTATGCAGAAGTTTCTGAAAGATGCTCCAAAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR-3UTR TCA 90 bp | CTACTTTGGAGCATCTTTCAGAAACTTCTGCATACTCATTCCAAAGACTTAACAAGGAAACGGCAGCCCTaGGAAAAGAGCATCATGGCT | + |
|
Preference number: 2 (lower is better) Translates to: LLWSIFQKLLHTHSKDLTRKRQP*EKSIMA Trigger: AGCCATGATGCTCTTTTCTCAGGGCTGCCGTTTCCT...TGTTAAGTCTTTGGAATGAGTATGCAGAAGTTTCTGAAAGATGCTCCAAAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR-3UTR GCA 90 bp | TTAGGGATATATAATTTGGGGGAGGGCTACTTTGGAGCATCTTTCAGAAACTTCGGCTTGTTTCAGATTTaGTGGGCCCACAGATACCAA | + |
|
Preference number: 2 (lower is better) Translates to: LGIYNLGEGYFGASFRNFGLFQI*WAHRYQ Trigger: TTGGTATCTGTGGGCCCAGCAAATCTGAAACAAGCC...GAAGTTTCTGAAAGATGCTCCAAAGTAGCCCTCCCCCAAATTATATATCCCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR-3UTR CCA 90 bp | ATCTCCAGTGAGGCTAGCCTGGTCTTCATAGGGTGTTCTAAGCCAAAAGAAAAAAATCCTGCCTTCACATaGGAAGCCTTTTATACGGTA | + |
|
Preference number: 2 (lower is better) Translates to: ISSEASLVFIGCSKPKEKNPAFT*EAFYTV Trigger: TACCGTATAAAAGGCTTCCCATGTGAAGGCAGGATT...TTTTTCTTTTGGCTTAGAACACCCTATGAAGACCAGGCTAGCCTCACTGGAGAT 43% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR-3UTR CCA 90 bp | CTACTTTGGAGCATCTTTCAGAAACTTCTGCATACTCATTCCAAAGACTTAACAAACGTGGGCCCTCAGTaGAAGCATCCTTCTTTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: LLWSIFQKLLHTHSKDLTNVGPQ*KHPSFL Trigger: GAGGAAAGAAGGATGCTTCCACTGAGGGCCCACGTT...TGTTAAGTCTTTGGAATGAGTATGCAGAAGTTTCTGAAAGATGCTCCAAAGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR CAA 90 bp | AGGAGGCTTAATGTGCCAATTTCGTTTCTAGTAGCAAATAAGTGTTaGGAGAGGAGAATCTGTTTATCCCAGCTCAGAATACACAGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: RRLNVPISFLVANKC*ERRICLSQLRIHSQ Trigger: CTGGCTGTGTATTCTGAGCTGGGATAAACAGATTCTCCTCTCCAAACACTTATTTGCTACTAGAAACGAAATTGGCACATTAAGCCTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR-3UTR CCA 90 bp | GAAAAGAGCATCATGGCTAGACATGACAGTAGCCAATCAACTGCCCCATGTGAAGAATATACCCATCACTaGAGGACAGAATATACCTAT | + |
|
Preference number: 2 (lower is better) Translates to: EKSIMARHDSSQSTAPCEEYTHH*RTEYTY Trigger: ATAGGTATATTCTGTCCTCCAGTGATGGGTATATTC...TTCACATGGGGCAGTTGATTGGCTACTGTCATGTCTAGCCATGATGCTCTTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR-3UTR TCA 90 bp | GATCTTGCTTCTGCTTCCTCAGTGTTGGGCTTACAGGTAAGTTTGGGTGTTAAATGGAGTTCAAATTCTTaGACTGTAATAAAAGGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: DLASASSVLGLQVSLGVKWSSNS*TVIKGG Trigger: GCCTCCTTTTATTACAGTTCAAGAATTTGAACTCCA...TTTAACACCCAAACTTACCTGTAAGCCCAACACTGAGGAAGCAGAAGCAAGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR-3UTR GCA 90 bp | CTACTTTGGAGCATCTTTCAGAAACTTCTGCATACTCATTCCAAAGACTTAACAACCAATCACAAATCCTaGCTTCACATGGGAAGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: LLWSIFQKLLHTHSKDLTTNHKS*LHMGSL Trigger: AAGGCTTCCCATGTGAAGGCAGGATTTGTGATTGGT...TGTTAAGTCTTTGGAATGAGTATGCAGAAGTTTCTGAAAGATGCTCCAAAGTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR-3UTR GCA 90 bp | ATCTCCAGTGAGGCTAGCCTGGTCTTCATAGGGTGTTCTAAGCCAAAAGAAAAATCTTTCAGAAACTTCTaGATACTCATTCCAAAGACT | + |
|
Preference number: 2 (lower is better) Translates to: ISSEASLVFIGCSKPKEKSFRNF*ILIPKT Trigger: AGTCTTTGGAATGAGTATGCAGAAGTTTCTGAAAGA...TTTTTCTTTTGGCTTAGAACACCCTATGAAGACCAGGCTAGCCTCACTGGAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR-3UTR TCA 90 bp | TTAGGGATATATAATTTGGGGGAGGGCTACTTTGGAGCATCTTTCAGAAACTTCTTTTTGAAAAACCAATaGCCAACAGTAGCTTCACTG | + |
|
Preference number: 2 (lower is better) Translates to: LGIYNLGEGYFGASFRNFFLKNQ*PTVASL Trigger: CAGTGAAGCTACTGTTGGTCATTGGTTTTTCAAAAA...GAAGTTTCTGAAAGATGCTCCAAAGTAGCCCTCCCCCAAATTATATATCCCTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR-3UTR CAA 90 bp | TGCACCACCTGCCCCACCAGTCTGCGAGGGGCTATCTGGTCCTGCCTACCTGGCTTGCTTCCTCCTCCTTaGCCAGGATACATCTGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: CTTCPTSLRGAIWSCLPGLLPPP*PGYICP Trigger: GGGACAGATGTATCCTGGCAAAGGAGGAGGAAGCAA...GCCAGGTAGGCAGGACCAGATAGCCCCTCGCAGACTGGTGGGGCAGGTGGTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153377.2 |
||
| 3UTR GCA 72 bp | CCCATTCACTCCAGAACAGGAGGAGGAAGGAGGGAATaGTCTTCAGGAGCGCTCGCTCCCTGTTCGCGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: PIHSRTGGGRRE*SSGALAPCSRL Trigger: GAGCCGCGAACAGGGAGCGAGCGCTCCTGAAGAGCATTCCCTCCTTCCTCCTCCTGTTCTGGAGTGAATGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153377.2 |
||
| 3UTR TCA 72 bp | CAGATACAACAGGCCATGGGACCACAGCAGGTGCACTaGGGAGGGAGTGGTACTCTGGGGGTGTCATGGACT | + |
|
Preference number: 3 (lower is better) Translates to: QIQQAMGPQQVH*GGSGTLGVSWT Trigger: AGTCCATGACACCCCCAGAGTACCACTCCCTCCTCAGTGCACCTGCTGTGGTCCCATGGCCTGTTGTATCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR TCA 72 bp | AGAGCTAGAAGCCAGTGGTCCCAGGGGACACTGGACTaGAGCAGTTGTGCTGTCCAGATGCCCCTGCAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: RARSQWSQGTLD*SSCAVQMPLQL Trigger: CAACTGCAGGGGCATCTGGACAGCACAACTGCTTCAGTCCAGTGTCCCCTGGGACCACTGGCTTCTAGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR TCA 72 bp | AGAAACGATTTCCAGTGGTGGAGCTCCCAGGAGCCCTaGGGTAGCTTCCCCATGGACAGATGGCTGGCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: RNDFQWWSSQEP*GSFPMDRWLAK Trigger: CTTGGCCAGCCATCTGTCCATGGGGAAGCTACCTCAGGGCTCCTGGGAGCTCCACCACTGGAAATCGTTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR CCA 72 bp | GAAAGAGAGCTAGAAGCCAGTGGTCCCAGGGGACACTaGACTGAAGCAGTTGTGCTGTCCAGATGCCCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: ERELEASGPRGH*TEAVVLSRCPC Trigger: GCAGGGGCATCTGGACAGCACAACTGCTTCAGTCCAGTGTCCCCTGGGACCACTGGCTTCTAGCTCTCTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR TCA 72 bp | CCAGGAGACGGGGAGACAAAGATTCCCCAGAACCGATaGGAAGTTCTGGACGGCACTGTCGTGAATCTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: PGDGETKIPQNR*EVLDGTVVNLP Trigger: GGGCAGATTCACGACAGTGCCGTCCAGAACTTCTCATCGGTTCTGGGGAATCTTTGTCTCCCCGTCTCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR TCA 72 bp | GACAGATGGCTGGCCAAGGAGCAGACTGTCCTCACTTaGAAGAGAGCTAGAAGCCAGTGGTCCCAGGGGACA | + |
|
Preference number: 3 (lower is better) Translates to: DRWLAKEQTVLT*KRARSQWSQGT Trigger: TGTCCCCTGGGACCACTGGCTTCTAGCTCTCTTTCAAGTGAGGACAGTCTGCTCCTTGGCCAGCCATCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR GCA 72 bp | ACTGAAGCAGTTGTGCTGTCCAGATGCCCCTGCAGTTaGTGTAACAGGGGCCGTCCTCCTGAGAACAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: TEAVVLSRCPCS*CNRGRPPENRR Trigger: TCTCCTGTTCTCAGGAGGACGGCCCCTGTTACAGCAACTGCAGGGGCATCTGGACAGCACAACTGCTTCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR CCA 72 bp | GGCCATGGGACCACAGCAGGTGCACTGAGGAGGGAGTaGTACTCTGGGGGTGTCATGGACTCAAGAGAAATA | + |
|
Preference number: 3 (lower is better) Translates to: GHGTTAGALRRE*YSGGVMDSREI Trigger: TATTTCTCTTGAGTCCATGACACCCCCAGAGTACCACTCCCTCCTCAGTGCACCTGCTGTGGTCCCATGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR CCA 72 bp | AGGAGCCCTGAGGTAGCTTCCCCATGGACAGATGGCTaGCCAAGGAGCAGACTGTCCTCACTTGAAAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: RSPEVASPWTDG*PRSRLSSLERE Trigger: CTCTCTTTCAAGTGAGGACAGTCTGCTCCTTGGCCAGCCATCTGTCCATGGGGAAGCTACCTCAGGGCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR GCA 72 bp | ATACACAGATACAACAGGCCATGGGACCACAGCAGGTaGACTGAGGAGGGAGTGGTACTCTGGGGGTGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: IHRYNRPWDHSR*TEEGVVLWGCH Trigger: ATGACACCCCCAGAGTACCACTCCCTCCTCAGTGCACCTGCTGTGGTCCCATGGCCTGTTGTATCTGTGTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR CCA 72 bp | TTGTGTCCAGGACGCCCTGAGCTGGGGAGGGAGGTGTaGCTTGGTAAGAGAAACATGAACGGAAACCAACTG | + |
|
Preference number: 3 (lower is better) Translates to: LCPGRPELGREV*LGKRNMNGNQL Trigger: CAGTTGGTTTCCGTTCATGTTTCTCTTACCAAGCCACACCTCCCTCCCCAGCTCAGGGCGTCCTGGACACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR CCA 72 bp | GGTGGAATGAAGAGAGACGCGGGAGTCAACGGGTACTaGGAGACATTTCAAGAAAGACCCTCAGAGGGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: GGMKRDAGVNGY*ETFQERPSEGS Trigger: GCTGCCCTCTGAGGGTCTTTCTTGAAATGTCTCCCAGTACCCGTTGACTCCCGCGTCTCTCTTCATTCCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153377.2 |
||
| 3UTR TCA 72 bp | GGCCCTCAGTGGAAGCATCCTTCTTTCCTCACACGATaGACAAGCGCATTCCCTCTTCAACTCCAGGAGACG | + |
|
Preference number: 3 (lower is better) Translates to: GPQWKHPSFLTR*TSAFPLQLQET Trigger: CGTCTCCTGGAGTTGAAGAGGGAATGCGCTTGTTCATCGTGTGAGGAAAGAAGGATGCTTCCACTGAGGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR CCA 72 bp | ACTCTGCTGGTCCCTCCTCGCCAACTTTATAGTTGTTaGGCTATGCAGAACGTGGGCCCTCAGTGGAAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: TLLVPPRQLYSC*AMQNVGPQWKH Trigger: ATGCTTCCACTGAGGGCCCACGTTCTGCATAGCCCAACAACTATAAAGTTGGCGAGGAGGGACCAGCAGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR TCA 72 bp | CTTCTAGCCTCAGGGCCTTTGCAAAGGGAACTCCCTTaGCCTCCCAACAAAGCTCTGCCCATTCAGTTCACT | + |
|
Preference number: 3 (lower is better) Translates to: LLASGPLQRELP*PPNKALPIQFT Trigger: AGTGAACTGAATGGGCAGAGCTTTGTTGGGAGGTCAAGGGAGTTCCCTTTGCAAAGGCCCTGAGGCTAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR CCA 72 bp | AAAAGGATGAGTGCCCTGTCCCAGCTTCTCCTAGATTaGCAGCACCCTCAAACAGGACAGCAGCAGATCATC | + |
|
Preference number: 3 (lower is better) Translates to: KRMSALSQLLLD*QHPQTGQQQII Trigger: GATGATCTGCTGCTGTCCTGTTTGAGGGTGCTGCCAATCTAGGAGAAGCTGGGACAGGGCACTCATCCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR TCA 72 bp | CCTCTGTCTCCTTCTCGGTGGGGTTCCCAGACACGGTaGCAAACATCATCAGAGTCTTCCCTTTCTTTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: PLSPSRWGSQTR*QTSSESSLSLS Trigger: TGACAAAGAAAGGGAAGACTCTGATGATGTTTGTCACCGTGTCTGGGAACCCCACCGAGAAGGAGACAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153377.2 |
||
| 3UTR GCA 72 bp | TTCTTCCTTTCTCCTCACAGTCAGTCATTCCTGCCATaGCTGCACTGTCCTCAGAACCCACCAGTGACAACT | + |
|
Preference number: 3 (lower is better) Translates to: FFLSPHSQSFLP*LHCPQNPPVTT Trigger: AGTTGTCACTGGTGGGTTCTGAGGACAGTGCAGGCATGGCAGGAATGACTGACTGTGAGGAGAAAGGAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR CCA 72 bp | TGTGATGGCCAAGGCTGTCAAGGATCACAGACCTGCTaGGAAGTCTCAAATGACAGAACTATCAGGAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: CDGQGCQGSQTC*EVSNDRTIRSS Trigger: GCTGCTCCTGATAGTTCTGTCATTTGAGACTTCCCAGCAGGTCTGTGATCCTTGACAGCCTTGGCCATCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR CCA 72 bp | TCTGCTCCCAGCTCGATTGTCTTCCTTGGAAGCACGTaGTTTGGGATCTCCCTCCTTCTTTTTAGCCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SAPSSIVFLGST*FGISLLLFSLL Trigger: GAGAAGGCTAAAAAGAAGGAGGGAGATCCCAAACCACGTGCTTCCAAGGAAGACAATCGAGCTGGGAGCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153377.2 |
||
| 3UTR TCA 72 bp | CAGCACTGCTCATACGGCACAGTTATCTTCACTCACTaGACACAGCACTGCCCATACGGCACAGTTATCTTC | + |
|
Preference number: 3 (lower is better) Translates to: QHCSYGTVIFTH*TQHCPYGTVIF Trigger: GAAGATAACTGTGCCGTATGGGCAGTGCTGTGTTCAGTGAGTGAAGATAACTGTGCCGTATGAGCAGTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR TCA 72 bp | AGCTGGGGAGGGAGGTGTGGCTTGGTAAGAGAAACATaGACGGAAACCAACTGGAGGACAGAATATACCCAT | + |
|
Preference number: 3 (lower is better) Translates to: SWGGRCGLVRET*TETNWRTEYTH Trigger: ATGGGTATATTCTGTCCTCCAGTTGGTTTCCGTTCATGTTTCTCTTACCAAGCCACACCTCCCTCCCCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR GCA 72 bp | ACATGTGATGGCCAAGGCTGTCAAGGATCACAGACCTaGTGGGAAGTCTCAAATGACAGAACTATCAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: TCDGQGCQGSQT*WEVSNDRTIRS Trigger: GCTCCTGATAGTTCTGTCATTTGAGACTTCCCAGCAGGTCTGTGATCCTTGACAGCCTTGGCCATCACATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR-3UTR CAA 90 bp | ACCTGCTGGGAAGTCTCAAATGACAGAACTATCAGGAGCAGCTATTTAGCAATACCAGCTTCTCCTAGATaGGCAGCACCCTCAAACAGG | + |
|
Preference number: 3 (lower is better) Translates to: TCWEVSNDRTIRSSYLAIPASPR*AAPSNR Trigger: CCTGTTTGAGGGTGCTGCCAATCTAGGAGAAGCTGG...TATTGCTAAATAGCTGCTCCTGATAGTTCTGTCATTTGAGACTTCCCAGCAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR-3UTR CAA 90 bp | GTCGGATCCCACGATGAACCTCTGAACGTCATAGTTGGCGTTGAACAGGCTACCGAGTCTTCCCTTTCTTaGTCATTTTCAAGATGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: VGSHDEPLNVIVGVEQATESSLS*SFSRCS Trigger: AGAGCATCTTGAAAATGACAAAGAAAGGGAAGACTC...GGTAGCCTGTTCAACGCCAACTATGACGTTCAGAGGTTCATCGTGGGATCCGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153377.2 |
||
| 3UTR TCA 72 bp | CAGCACTGCTCATACGACACAGTTATCTTCACTCACTaGACACAGCACTGCTCATACGGCACAGTTATCTTC | + |
|
Preference number: 3 (lower is better) Translates to: QHCSYDTVIFTH*TQHCSYGTVIF Trigger: GAAGATAACTGTGCCGTATGAGCAGTGCTGTGTTCAGTGAGTGAAGATAACTGTGTCGTATGAGCAGTGCTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR TCA 72 bp | CAGCACTGCTCATACGGCACAGTTATCTTCACTCACTaGACACAGCACTGCTCATACGACACAGTTATCTTC | + |
|
Preference number: 3 (lower is better) Translates to: QHCSYGTVIFTH*TQHCSYDTVIF Trigger: GAAGATAACTGTGTCGTATGAGCAGTGCTGTGTTCAGTGAGTGAAGATAACTGTGCCGTATGAGCAGTGCTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR GCA 72 bp | TTTCCAAAGTCAGGTGAAGCCACAGTAGACATGACTTaGCAGTCCACTACCAATCACAAATCCTGCCTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: FPKSGEATVDMT*QSTTNHKSCLH Trigger: GTGAAGGCAGGATTTGTGATTGGTAGTGGACTGGCAAGTCATGTCTACTGTGGCTTCACCTGACTTTGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR GCA 72 bp | GACATGACTTGCCAGTCCACTACCAATCACAAATCCTaGCTTCACATGGGAAGCCTTTTATACGGTAACTGT | + |
|
Preference number: 3 (lower is better) Translates to: DMTCQSTTNHKS*LHMGSLLYGNC Trigger: ACAGTTACCGTATAAAAGGCTTCCCATGTGAAGGCAGGATTTGTGATTGGTAGTGGACTGGCAAGTCATGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR CCA 72 bp | ACGGAAACCAACTGGAGGACAGAATATACCCATCACTaGAGGACAGAATATACCTATCACTGGAAGCTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: TETNWRTEYTHH*RTEYTYHWKLV Trigger: TACCAGCTTCCAGTGATAGGTATATTCTGTCCTCCAGTGATGGGTATATTCTGTCCTCCAGTTGGTTTCCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
||
| 3UTR-3UTR CAA 90 bp | CTACTTTGGAGCATCTTTCAGAAACTTCTGCATACTCATTCCAAAGACTTAACAACTGGACTGAAGCAGTaGTGCTGTCCAGATGCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: LLWSIFQKLLHTHSKDLTTGLKQ*CCPDAP Trigger: AGGGGCATCTGGACAGCACAACTGCTTCAGTCCAGT...TGTTAAGTCTTTGGAATGAGTATGCAGAAGTTTCTGAAAGATGCTCCAAAGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR TCA 72 bp | TCAGTCAAGTTGAAGCTTCTCAAGGCTTGTCTGACTTaGGCTTGTAATACACAGATACAACAGGCCATGGGA | + |
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Preference number: 3 (lower is better) Translates to: SVKLKLLKACLT*ACNTQIQQAMG Trigger: TCCCATGGCCTGTTGTATCTGTGTATTACAAGCTCAAGTCAGACAAGCCTTGAGAAGCTTCAACTTGACTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR TCA 72 bp | GGCTTCTTGTGCTTTAGAAACTCGAACCCAAGAATTTaGAGAAATGTGACAACACGAGGCAGTTTAGGGACT | + |
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Preference number: 3 (lower is better) Translates to: GFLCFRNSNPRI*RNVTTRGSLGT Trigger: AGTCCCTAAACTGCCTCGTGTTGTCACATTTCTTCAAATTCTTGGGTTCGAGTTTCTAAAGCACAAGAAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR TCA 72 bp | ATAAAAGGTACAAAACATCAAGTTTCCAAAGTCAGGTaGAGCCACAGTAGACATGACTTGCCAGTCCACTAC | + |
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Preference number: 3 (lower is better) Translates to: IKGTKHQVSKVR*SHSRHDLPVHY Trigger: GTAGTGGACTGGCAAGTCATGTCTACTGTGGCTTCACCTGACTTTGGAAACTTGATGTTTTGTACCTTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR TCA 72 bp | GGGAGGGTAAATCGATCAATCTGGAGTTCAAATTCTTaGACTGTAATAAAAGGAGGCTTAATGTGCCAATTT | + |
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Preference number: 3 (lower is better) Translates to: GRVNRSIWSSNS*TVIKGGLMCQF Trigger: AAATTGGCACATTAAGCCTCCTTTTATTACAGTTCAAGAATTTGAACTCCAGATTGATCGATTTACCCTCCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| CDS-3UTR GCA 90 bp | TGCACCACCTGCCCCACCAGTCTGCGAGGGGCTATCTGGTCCTGCCTACCTGGCAAAGGTCTTCTCTTCTaGTCCCAGCTCGATTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: CTTCPTSLRGAIWSCLPGKGLLF*SQLDCL Trigger: AAGACAATCGAGCTGGGAGCAGAAGAGAAGACCTTT...GCCAGGTAGGCAGGACCAGATAGCCCCTCGCAGACTGGTGGGGCAGGTGGTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR CAA 72 bp | CCAGTCCAGACTCCTCAGGGGCCTCCAAGAGCACCCTaGTCTACTACTTCTAGCCTCAGGGCCTTTGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: PVQTPQGPPRAP*STTSSLRAFAK Trigger: CTTTGCAAAGGCCCTGAGGCTAGAAGTAGTAGACAAGGGTGCTCTTGGAGGCCCCTGAGGAGTCTGGACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| CDS-3UTR CCA 90 bp | GATGAGTGCCCTGTCCCAGCTTCTCCTAGATTGGCAGCACCCTCAAACAGGACATTCCTTGGAAGCACGTaGTTTGGGATCTCCCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: DECPVPASPRLAAPSNRTFLGST*FGISLL Trigger: AAGGAGGGAGATCCCAAACCACGTGCTTCCAAGGAA...TGTCCTGTTTGAGGGTGCTGCCAATCTAGGAGAAGCTGGGACAGGGCACTCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR CAA 72 bp | CAAAAGGATGAGTGCCCTGTCCCAGCTTCTCCTAGATaGGCAGCACCCTCAAACAGGACAGCAGCAGATCAT | + |
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Preference number: 4 (lower is better) Translates to: QKDECPVPASPR*AAPSNRTAADH Trigger: ATGATCTGCTGCTGTCCTGTTTGAGGGTGCTGCCAATCTAGGAGAAGCTGGGACAGGGCACTCATCCTTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR CAA 72 bp | ACTTCTAGCCTCAGGGCCTTTGCAAAGGGAACTCCCTaGACCTCCCAACAAAGCTCTGCCCATTCAGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: TSSLRAFAKGTP*TSQQSSAHSVH Trigger: GTGAACTGAATGGGCAGAGCTTTGTTGGGAGGTCAAGGGAGTTCCCTTTGCAAAGGCCCTGAGGCTAGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR CAA 72 bp | CTCCCAGCTCGATTGTCTTCCTTGGAAGCACGTGGTTaGGGATCTCCCTCCTTCTTTTTAGCCTTCTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: LPARLSSLEARG*GSPSFFLAFSG Trigger: GCCAGAGAAGGCTAAAAAGAAGGAGGGAGATCCCAAACCACGTGCTTCCAAGGAAGACAATCGAGCTGGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153377.2 |
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| CDS-3UTR TCA 90 bp | ACCAACAGTAGCTTCACTGGGACAAAGTACTGGCAGCAGGGTAGGGCAATTCTTCGTCATAGTTGGCGTTaGACAGGCTACCCTGCCACA | + |
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Preference number: 4 (lower is better) Translates to: TNSSFTGTKYWQQGRAILRHSWR*TGYPAT Trigger: TGTGGCAGGGTAGCCTGTTCAACGCCAACTATGACG...AAGAATTGCCCTACCCTGCTGCCAGTACTTTGTCCCAGTGAAGCTACTGTTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| CDS-3UTR CCA 90 bp | GATGAGTGCCCTGTCCCAGCTTCTCCTAGATTGGCAGCACCCTCAAACAGGACATGGAAGCACGTGGTTTaGGATCTCCCTCCTTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: DECPVPASPRLAAPSNRTWKHVV*DLPPSF Trigger: AAAAGAAGGAGGGAGATCCCAAACCACGTGCTTCCA...TGTCCTGTTTGAGGGTGCTGCCAATCTAGGAGAAGCTGGGACAGGGCACTCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| CDS-3UTR TCA 90 bp | ACCTGCTGGGAAGTCTCAAATGACAGAACTATCAGGAGCAGCTATTTAGCAATAGAAGTCGATAGGTGCTaGGGGTCTCTTGTGTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: TCWEVSNDRTIRSSYLAIEVDRC*GSLVFW Trigger: CCAGAACACAAGAGACCCTCAGCACCTATCGACTTC...TATTGCTAAATAGCTGCTCCTGATAGTTCTGTCATTTGAGACTTCCCAGCAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| CDS-3UTR TCA 90 bp | TTATCTTCACTCACTGAACACAGCACTGCTCATACGGCACAGTTATCTTCACTCTCAGCACACCGGTCTTaGCTGACCAAAAAGTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: LSSLTEHSTAHTAQLSSLSAHRS*LTKKSL Trigger: CAAGGACTTTTTGGTCAGTCAAGACCGGTGTGCTGA...GAGTGAAGATAACTGTGCCGTATGAGCAGTGCTGTGTTCAGTGAGTGAAGATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| CDS-3UTR GCA 90 bp | GATCTTGCTTCTGCTTCCTCAGTGTTGGGCTTACAGGTAAGTTTGGGTGTTAAATGCTTCCTCCTCCTTTaGCAGGATACATCTGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: DLASASSVLGLQVSLGVKCFLLL*QDTSVP Trigger: AGGGACAGATGTATCCTGGCAAAGGAGGAGGAAGCA...TTTAACACCCAAACTTACCTGTAAGCCCAACACTGAGGAAGCAGAAGCAAGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| CDS-3UTR GCA 90 bp | ATCTCCAGTGAGGCTAGCCTGGTCTTCATAGGGTGTTCTAAGCCAAAAGAAAAAAGATGCTCTCAGGTTTaGCTGGGTCTAGCTTTGAGA | + |
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Preference number: 4 (lower is better) Translates to: ISSEASLVFIGCSKPKEKRCSQV*LGLALR Trigger: TCTCAAAGCTAGACCCAGGCAAACCTGAGAGCATCT...TTTTTCTTTTGGCTTAGAACACCCTATGAAGACCAGGCTAGCCTCACTGGAGAT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR CAA 72 bp | TCTGGAACTTCTGATCTTGCTTCTGCTTCCTCAGTGTaGGGCTTACAGGTAAGTTTGGGTGTTAAAGCACTT | + |
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Preference number: 4 (lower is better) Translates to: SGTSDLASASSV*GLQVSLGVKAL Trigger: AAGTGCTTTAACACCCAAACTTACCTGTAAGCCCAACACTGAGGAAGCAGAAGCAAGATCAGAAGTTCCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR CAA 72 bp | TTCCCTTTCTTTGTCATTTTCAAGATGCTCTCAGGTTaGCCTGGGTCTAGCTTTGAGAAGTCGATAGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: FPFFVIFKMLSG*PGSSFEKSIGA Trigger: AGCACCTATCGACTTCTCAAAGCTAGACCCAGGCAAACCTGAGAGCATCTTGAAAATGACAAAGAAAGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153377.2 |
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| CDS-3UTR GCA 90 bp | TTTCAGAAACTTCTGCATACTCATTCCAAAGACTTAACACAGCTCCTCCCACTGTTGTCATTTTCAAGATaGTCTCAGGTTTGCCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: FQKLLHTHSKDLTQLLPLLSFSR*SQVCLG Trigger: ACCCAGGCAAACCTGAGAGCATCTTGAAAATGACAA...CAGTGGGAGGAGCTGTGTTAAGTCTTTGGAATGAGTATGCAGAAGTTTCTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR CAA 72 bp | GCTTCTGCTTCCTCAGTGTTGGGCTTACAGGTAAGTTaGGGTGTTAAAGCACTTTTAGGGATATATAATTTG | + |
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Preference number: 4 (lower is better) Translates to: ASASSVLGLQVS*GVKALLGIYNL Trigger: CAAATTATATATCCCTAAAAGTGCTTTAACACCCAAACTTACCTGTAAGCCCAACACTGAGGAAGCAGAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR CAA 72 bp | AACCAACATTCAGACCTAGGTCATAGGTTGTTTCTGTaGTTGTTAGTGGTAGTGTTTTGCTTATTTCGTCTC | + |
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Preference number: 4 (lower is better) Translates to: NQHSDLGHRLFL*LLVVVFCLFRL Trigger: GAGACGAAATAAGCAAAACACTACCACTAACAACAACAGAAACAACCTATGACCTAGGTCTGAATGTTGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR CAA 72 bp | AATGTGCCAATTTCGTTTCTAGTAGCAAATAAGTGTTaGGAGAGGAGAATCTGTTTATCCCAGCTCAGAATA | + |
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Preference number: 4 (lower is better) Translates to: NVPISFLVANKC*ERRICLSQLRI Trigger: TATTCTGAGCTGGGATAAACAGATTCTCCTCTCCAAACACTTATTTGCTACTAGAAACGAAATTGGCACATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR CAA 72 bp | AGGGAGGGTAAATCGATCAATCTGGAGTTCAAATTCTaGAACTGTAATAAAAGGAGGCTTAATGTGCCAATT | + |
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Preference number: 4 (lower is better) Translates to: REGKSINLEFKF*NCNKRRLNVPI Trigger: AATTGGCACATTAAGCCTCCTTTTATTACAGTTCAAGAATTTGAACTCCAGATTGATCGATTTACCCTCCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| 3UTR CAA 72 bp | CAACATTCAGACCTAGGTCATAGGTTGTTTCTGTTGTaGTTAGTGGTAGTGTTTTGCTTATTTCGTCTCATT | + |
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Preference number: 4 (lower is better) Translates to: QHSDLGHRLFLL*LVVVFCLFRLI Trigger: AATGAGACGAAATAAGCAAAACACTACCACTAACAACAACAGAAACAACCTATGACCTAGGTCTGAATGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| CDS CCA 90 bp | GTCGGCATCGTTGTAATCGCGGATGTCCTTCTTTTTCCGTGGAGGTaGGGTGGCCTCGCCCGGAGTGTCCGCCGCGTAGGCATTAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: VGIVVIADVLLFPWR*GGLARSVRRVGIRR Trigger: CCTCCTAATGCCTACGCGGCGGACACTCCGGGCGAGGCCACCCCACCTCCACGGAAAAAGAAGGACATCCGCGATTACAACGATGCCGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094215.10 ENSMUST00000130103.2 ENSMUST00000153377.2 |
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| CDS CCA 90 bp | CGCCATGTCGGCATCGTTGTAATCGCGGATGTCCTTCTTTTTCCGTaGAGGTGGGGTGGCCTCGCCCGGAGTGTCCGCCGCGTAGGCATT | + |
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Preference number: 5 (lower is better) Translates to: RHVGIVVIADVLLFP*RWGGLARSVRRVGI Trigger: AATGCCTACGCGGCGGACACTCCGGGCGAGGCCACCCCACCTCCACGGAAAAAGAAGGACATCCGCGATTACAACGATGCCGACATGGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094215.10 ENSMUST00000130103.2 ENSMUST00000153377.2 |
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| CDS-3UTR CAA 90 bp | GATGAGTGCCCTGTCCCAGCTTCTCCTAGATTGGCAGCACCCTCAAACAGGACATTCAGCACACCGGTCTaGACTGACCAAAAAGTCCTT | + |
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Preference number: 5 (lower is better) Translates to: DECPVPASPRLAAPSNRTFSTPV*TDQKVL Trigger: AAGGACTTTTTGGTCAGTCAAGACCGGTGTGCTGAA...TGTCCTGTTTGAGGGTGCTGCCAATCTAGGAGAAGCTGGGACAGGGCACTCATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| CDS-3UTR CAA 90 bp | ACCAACAGTAGCTTCACTGGGACAAAGTACTGGCAGCAGGGTAGGGCAATTCTTCTGCTCCCAGCTCGATaGTCTTCCTTGGAAGCACGT | + |
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Preference number: 5 (lower is better) Translates to: TNSSFTGTKYWQQGRAILLLPAR*SSLEAR Trigger: ACGTGCTTCCAAGGAAGACAATCGAGCTGGGAGCAG...AAGAATTGCCCTACCCTGCTGCCAGTACTTTGTCCCAGTGAAGCTACTGTTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| CDS-3UTR CAA 90 bp | AGCTTCTTTTTGAAGAGGCTCAGCAGGTTGTGTCCAGGACGCCCTGAGCTGGGGGAGTCTTCCCTTTCTTaGTCATTTTCAAGATGCTCT | + |
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Preference number: 5 (lower is better) Translates to: SFFLKRLSRLCPGRPELGESSLS*SFSRCS Trigger: AGAGCATCTTGAAAATGACAAAGAAAGGGAAGACTC...CCCCAGCTCAGGGCGTCCTGGACACAACCTGCTGAGCCTCTTCAAAAAGAAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| CDS-3UTR CAA 90 bp | CTACTTTGGAGCATCTTTCAGAAACTTCTGCATACTCATTCCAAAGACTTAACATTGCTTCCTCCTCCTTaGCCAGGATACATCTGTCCC | + |
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Preference number: 5 (lower is better) Translates to: LLWSIFQKLLHTHSKDLTLLPPP*PGYICP Trigger: GGGACAGATGTATCCTGGCAAAGGAGGAGGAAGCAA...TGTTAAGTCTTTGGAATGAGTATGCAGAAGTTTCTGAAAGATGCTCCAAAGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094215.10 |
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| CDS CCA 72 bp | GTTGTAATCGCGGATGTCCTTCTTTTTCCGTGGAGGTaGGGTGGCCTCGCCCGGAGTGTCCGCCGCGTAGGC | + |
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Preference number: 6 (lower is better) Translates to: VVIADVLLFPWR*GGLARSVRRVG Trigger: GCCTACGCGGCGGACACTCCGGGCGAGGCCACCCCACCTCCACGGAAAAAGAAGGACATCCGCGATTACAAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094215.10 ENSMUST00000130103.2 ENSMUST00000153377.2 |
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| CDS CCA 72 bp | GGCATCGTTGTAATCGCGGATGTCCTTCTTTTTCCGTaGAGGTGGGGTGGCCTCGCCCGGAGTGTCCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: GIVVIADVLLFP*RWGGLARSVRR Trigger: GCGGCGGACACTCCGGGCGAGGCCACCCCACCTCCACGGAAAAAGAAGGACATCCGCGATTACAACGATGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094215.10 ENSMUST00000130103.2 ENSMUST00000153377.2 |
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| CDS GCA 72 bp | GAGAAAAGGGATCTGTATGGGAGATGCTCAGAAGTGTaGAGGCGACACAGACCTCCCACTGCTCCAGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: EKRDLYGRCSEV*RRHRPPTAPEV Trigger: GACTTCTGGAGCAGTGGGAGGTCTGTGTCGCCTGCACACTTCTGAGCATCTCCCATACAGATCCCTTTTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153377.2 |
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