Pregenerated sensors for MEOX2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036144Ensembl transcript IDs: ENSMUST00000041183.7
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGCTAGGTATGTTCTCTAATGTATCTGCAGCAGTTGATAGTCAATaGAACAGAAGATTTGCTTTGTCTGTGGTACAAGGATATGTCCTA | + |
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Preference number: 1 (lower is better) Translates to: ELGMFSNVSAAVDSQ*NRRFALSVVQGYVL Trigger: TAGGACATATCCTTGTACCACAGACAAAGCAAATCTTCTGTTGCATTGACTATCAACTGCTGCAGATACATTAGAGAACATACCTAGCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| 3UTR CCA 90 bp | CTGCAGCAGTTGATAGTCAATGCAACAGAAGATTTGCTTTGTCTGTaGTACAAGGATATGTCCTATCAGACTCTACTGCATTTTATCTAC | + |
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Preference number: 1 (lower is better) Translates to: LQQLIVNATEDLLCL*YKDMSYQTLLHFIY Trigger: GTAGATAAAATGCAGTAGAGTCTGATAGGACATATCCTTGTACCACAGACAAAGCAAATCTTCTGTTGCATTGACTATCAACTGCTGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| 3UTR TCA 90 bp | AGGGGTAATATATACAGAGTTTCAGTACATTTTATATCCACTTGGTaGTTTCAGGCACTGTGGCTGTTCAAGATAAACTATTTCATGGAT | + |
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Preference number: 1 (lower is better) Translates to: RGNIYRVSVHFISTW*FQALWLFKINYFMD Trigger: ATCCATGAAATAGTTTATCTTGAACAGCCACAGTGCCTGAAATCACCAAGTGGATATAAAATGTACTGAAACTCTGTATATATTACCCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| 3UTR-3UTR TCA 90 bp | CTTTGTCTGTGGTACAAGGATATGTCCTATCAGACTCTACTGCATTTTATCTACCTAGTGTCACACACATaGCCTGGCACAACTGGAATG | + |
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Preference number: 2 (lower is better) Translates to: LCLWYKDMSYQTLLHFIYLVSHT*PGTTGM Trigger: CATTCCAGTTGTGCCAGGTCATGTGTGTGACACTAG...GTAGATAAAATGCAGTAGAGTCTGATAGGACATATCCTTGTACCACAGACAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| 3UTR-3UTR TCA 90 bp | TTGCTTTGTCTGTGGTACAAGGATATGTCCTATCAGACTCTACTGCATTTTATCACAATGGTGCTTTCCTaGGAATGGAGCTGGTCTTTG | + |
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Preference number: 2 (lower is better) Translates to: LLCLWYKDMSYQTLLHFITMVLS*EWSWSL Trigger: CAAAGACCAGCTCCATTCTCAGGAAAGCACCATTGT...GATAAAATGCAGTAGAGTCTGATAGGACATATCCTTGTACCACAGACAAAGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| 3UTR-3UTR GCA 90 bp | GCTGGAGGGGAGCTAGGTATGTTCTCTAATGTATCTGCAGCAGTTGATAGTCAAGACACAGACTCGAGATaGCTGCATTTAATTATACTA | + |
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Preference number: 2 (lower is better) Translates to: AGGELGMFSNVSAAVDSQDTDSR*LHLIIL Trigger: TAGTATAATTAAATGCAGGCATCTCGAGTCTGTGTC...TTGACTATCAACTGCTGCAGATACATTAGAGAACATACCTAGCTCCCCTCCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| 3UTR CAA 90 bp | TCTCTAATGTATCTGCAGCAGTTGATAGTCAATGCAACAGAAGATTaGCTTTGTCTGTGGTACAAGGATATGTCCTATCAGACTCTACTG | + |
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Preference number: 2 (lower is better) Translates to: SLMYLQQLIVNATED*LCLWYKDMSYQTLL Trigger: CAGTAGAGTCTGATAGGACATATCCTTGTACCACAGACAAAGCAAATCTTCTGTTGCATTGACTATCAACTGCTGCAGATACATTAGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| 3UTR-3UTR CCA 90 bp | ACATTTTATATCCACTTGGTGATTTCAGGCACTGTGGCTGTTCAAGATAAACTAGGTTTGCCATCACAATaGTGCTTTCCTGAGAATGGA | + |
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Preference number: 2 (lower is better) Translates to: TFYIHLVISGTVAVQDKLGLPSQ*CFPENG Trigger: TCCATTCTCAGGAAAGCACCATTGTGATGGCAAACC...TAGTTTATCTTGAACAGCCACAGTGCCTGAAATCACCAAGTGGATATAAAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| 3UTR-3UTR CCA 90 bp | TCTCTAATGTATCTGCAGCAGTTGATAGTCAATGCAACAGAAGATTTGCTTTGTGTCACACACATGACCTaGCACAACTGGAATGTTCAA | + |
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Preference number: 2 (lower is better) Translates to: SLMYLQQLIVNATEDLLCVTHMT*HNWNVQ Trigger: TTGAACATTCCAGTTGTGCCAGGTCATGTGTGTGAC...ACAAAGCAAATCTTCTGTTGCATTGACTATCAACTGCTGCAGATACATTAGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| 3UTR CAA 90 bp | AATGTATCTGCAGCAGTTGATAGTCAATGCAACAGAAGATTTGCTTaGTCTGTGGTACAAGGATATGTCCTATCAGACTCTACTGCATTT | + |
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Preference number: 2 (lower is better) Translates to: NVSAAVDSQCNRRFA*SVVQGYVLSDSTAF Trigger: AAATGCAGTAGAGTCTGATAGGACATATCCTTGTACCACAGACAAAGCAAATCTTCTGTTGCATTGACTATCAACTGCTGCAGATACATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| 3UTR-3UTR CCA 90 bp | CAGTTGATAGTCAATGCAACAGAAGATTTGCTTTGTCTGTGGTACAAGGATATGAGGAACAAGTGTATTTaGAATACGTTCGCTTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: QLIVNATEDLLCLWYKDMRNKCI*NTFAFS Trigger: GGAGAAAGCGAACGTATTCCAAATACACTTGTTCCT...CATATCCTTGTACCACAGACAAAGCAAATCTTCTGTTGCATTGACTATCAACTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| 3UTR-3UTR CCA 90 bp | TCAATGCAACAGAAGATTTGCTTTGTCTGTGGTACAAGGATATGTCCTATCAGAGGCTGTGTTTGTCAATaGAAAAGCCTATTTTTAATC | + |
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Preference number: 2 (lower is better) Translates to: SMQQKICFVCGTRICPIRGCVCQ*KSLFLI Trigger: GATTAAAAATAGGCTTTTCCATTGACAAACACAGCC...TCTGATAGGACATATCCTTGTACCACAGACAAAGCAAATCTTCTGTTGCATTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| 3UTR-3UTR CCA 90 bp | TCTCTAATGTATCTGCAGCAGTTGATAGTCAATGCAACAGAAGATTTGCTTTGTAAAAATACAAGAAGCTaGCTGTGTTTGTCAATGGAA | + |
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Preference number: 2 (lower is better) Translates to: SLMYLQQLIVNATEDLLCKNTRS*LCLSME Trigger: TTCCATTGACAAACACAGCCAGCTTCTTGTATTTTT...ACAAAGCAAATCTTCTGTTGCATTGACTATCAACTGCTGCAGATACATTAGAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| 3UTR GCA 72 bp | CTCGAGATGCCTGCATTTAATTATACTAAGCCACACTaGCACAGACATCTGCCATGTAAACGATGTTCGGTA | + |
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Preference number: 3 (lower is better) Translates to: LEMPAFNYTKPH*HRHLPCKRCSV Trigger: TACCGAACATCGTTTACATGGCAGATGTCTGTGGCAGTGTGGCTTAGTATAATTAAATGCAGGCATCTCGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| 3UTR-3UTR CAA 90 bp | AATCAGACATTTGCCGCACAAGACTCGTTCTGCAAGGTAACTGATTTGCCTATGACATTTTATATCCACTaGGTGATTTCAGGCACTGTG | + |
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Preference number: 3 (lower is better) Translates to: NQTFAAQDSFCKVTDLPMTFYIH*VISGTV Trigger: CACAGTGCCTGAAATCACCAAGTGGATATAAAATGT...CATAGGCAAATCAGTTACCTTGCAGAACGAGTCTTGTGCGGCAAATGTCTGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| 3UTR CCA 72 bp | TTGATAGTCAATGCAACAGAAGATTTGCTTTGTCTGTaGTACAAGGATATGTCCTATCAGACTCTACTGCAT | + |
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Preference number: 3 (lower is better) Translates to: LIVNATEDLLCL*YKDMSYQTLLH Trigger: ATGCAGTAGAGTCTGATAGGACATATCCTTGTACCACAGACAAAGCAAATCTTCTGTTGCATTGACTATCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| 3UTR TCA 72 bp | ATATACAGAGTTTCAGTACATTTTATATCCACTTGGTaGTTTCAGGCACTGTGGCTGTTCAAGATAAACTAT | + |
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Preference number: 3 (lower is better) Translates to: IYRVSVHFISTW*FQALWLFKINY Trigger: ATAGTTTATCTTGAACAGCCACAGTGCCTGAAATCACCAAGTGGATATAAAATGTACTGAAACTCTGTATAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR CCA 90 bp | ACGATGTTCGGTAAGGTTTGCCATCACAATGGTGCTTTCCTGAGAATGGAGCTGCCTTGCGCTGTGGCGTaGGGGCTGCGCAGGCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: TMFGKVCHHNGAFLRMELPCAVA*GLRRQP Trigger: TGGCTGCCTGCGCAGCCCCCACGCCACAGCGCAAGG...CAGCTCCATTCTCAGGAAAGCACCATTGTGATGGCAAACCTTACCGAACATCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR CCA 90 bp | ACGATGTTCGGTAAGGTTTGCCATCACAATGGTGCTTTCCTGAGAATGGAGCTGACGGCCATAATCCCCTaGTGCGCACGCGGCCCCGGT | + |
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Preference number: 4 (lower is better) Translates to: TMFGKVCHHNGAFLRMELTAIIP*CARGPG Trigger: ACCGGGGCCGCGTGCGCACCAGGGGATTATGGCCGT...CAGCTCCATTCTCAGGAAAGCACCATTGTGATGGCAAACCTTACCGAACATCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR TCA 90 bp | ACGATGTTCGGTAAGGTTTGCCATCACAATGGTGCTTTCCTGAGAATGGAGCTGTGGTGGTGCCCCCTGTaGTGCTGGCTGGCAAACATG | + |
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Preference number: 4 (lower is better) Translates to: TMFGKVCHHNGAFLRMELWWCPL*CWLANM Trigger: CATGTTTGCCAGCCAGCATCACAGGGGGCACCACCA...CAGCTCCATTCTCAGGAAAGCACCATTGTGATGGCAAACCTTACCGAACATCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR GCA 90 bp | ACGATGTTCGGTAAGGTTTGCCATCACAATGGTGCTTTCCTGAGAATGGAGCTGCTTTGCAGAGCCTGGTaGTGCTGCTGCTGGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: TMFGKVCHHNGAFLRMELLCRAW*CCCWWW Trigger: CCACCACCAGCAGCAGCAGCACCAGGCTCTGCAAAG...CAGCTCCATTCTCAGGAAAGCACCATTGTGATGGCAAACCTTACCGAACATCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR GCA 90 bp | ACGATGTTCGGTAAGGTTTGCCATCACAATGGTGCTTTCCTGAGAATGGAGCTGGCGGGAGGTGCCAGTTaGTTTGCAGAGCCTGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: TMFGKVCHHNGAFLRMELAGGAS*FAEPGA Trigger: AGCACCAGGCTCTGCAAAGCAACTGGCACCTCCCGC...CAGCTCCATTCTCAGGAAAGCACCATTGTGATGGCAAACCTTACCGAACATCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR GCA 90 bp | AGCCAAAGCAAACATCCATCTCCCTCTCTGTCATATATAGGAACAAGTGTATTTACAGGACCGGAGGGCTaGTTCCCAGCTCCGGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: SQSKHPSPSLSYIGTSVFTGPEG*FPAPGA Trigger: GGCCCCCGGAGCTGGGAAGCAGCCCTCCGGTCCTGT...AAATACACTTGTTCCTATATATGACAGAGAGGGAGATGGATGTTTGCTTTGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR GCA 90 bp | GGGGAGCTAGGTATGTTCTCTAATGTATCTGCAGCAGTTGATAGTCAATGCAACAGTGAGTCCCCTGTCTaGTGGAGGGTGGCTGCACCG | + |
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Preference number: 4 (lower is better) Translates to: GELGMFSNVSAAVDSQCNSESPV*WRVAAP Trigger: CGGTGCAGCCACCCTCCAGCAGACAGGGGACTCACT...GTTGCATTGACTATCAACTGCTGCAGATACATTAGAGAACATACCTAGCTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR CCA 90 bp | AGCCAAAGCAAACATCCATCTCCCTCTCTGTCATATATAGGAACAAGTGTATTTGCAAGCCTTGCGCTGTaGCGTGGGGGCTGCGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: SQSKHPSPSLSYIGTSVFASLAL*RGGCAG Trigger: GCCTGCGCAGCCCCCACGCCACAGCGCAAGGCTTGC...AAATACACTTGTTCCTATATATGACAGAGAGGGAGATGGATGTTTGCTTTGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR CCA 90 bp | CACTCTGGAGACATCTTGAGTAAAAACGTCTTATCAAGTTTGCTCTTGGTAGCAGTGCCGGGCCGCGCTTaGTGGAGAGGACATCTGCGG | + |
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Preference number: 4 (lower is better) Translates to: HSGDILSKNVLSSLLLVAVPGRA*WRGHLR Trigger: CCGCAGATGTCCTCTCCACCAAGCGCGGCCCGGCAC...TGCTACCAAGAGCAAACTTGATAAGACGTTTTTACTCAAGATGTCTCCAGAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR CCA 90 bp | CTTTGTCTGTGGTACAAGGATATGTCCTATCAGACTCTACTGCATTTTATCTACCCGGGCCGCGCTTGGTaGAGAGGACATCTGCGGGAG | + |
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Preference number: 4 (lower is better) Translates to: LCLWYKDMSYQTLLHFIYPGRAW*RGHLRE Trigger: CTCCCGCAGATGTCCTCTCCACCAAGCGCGGCCCGG...GTAGATAAAATGCAGTAGAGTCTGATAGGACATATCCTTGTACCACAGACAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR GCA 90 bp | AGCCAAAGCAAACATCCATCTCCCTCTCTGTCATATATAGGAACAAGTGTATTTCCTCCCGAATCAGGCTaGAGGCACAGGCTGTGCCGG | + |
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Preference number: 4 (lower is better) Translates to: SQSKHPSPSLSYIGTSVFPPESG*RHRLCR Trigger: CCGGCACAGCCTGTGCCTGCAGCCTGATTCGGGAGG...AAATACACTTGTTCCTATATATGACAGAGAGGGAGATGGATGTTTGCTTTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR GCA 90 bp | TCTCTAATGTATCTGCAGCAGTTGATAGTCAATGCAACAGAAGATTTGCTTTGTAAGGGGTGCAAGCCTTaGGCTGTGGCGTGGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SLMYLQQLIVNATEDLLCKGCKP*AVAWGL Trigger: CAGCCCCCACGCCACAGCGCAAGGCTTGCACCCCTT...ACAAAGCAAATCTTCTGTTGCATTGACTATCAACTGCTGCAGATACATTAGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR GCA 90 bp | ACGATGTTCGGTAAGGTTTGCCATCACAATGGTGCTTTCCTGAGAATGGAGCTGGGTATCCCGCGATTATaGAAGACGAGGAAGATGTGG | + |
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Preference number: 4 (lower is better) Translates to: TMFGKVCHHNGAFLRMELGIPRL*KTRKMW Trigger: CCACATCTTCCTCGTCTTGCATAATCGCGGGATACC...CAGCTCCATTCTCAGGAAAGCACCATTGTGATGGCAAACCTTACCGAACATCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR GCA 90 bp | ATCATGAGACACAGACTCGAGATGCCTGCATTTAATTATACTAAGCCACACTGCGCTGGCTGGCAAACATaGCCTCCTCGTTGGGGTATC | + |
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Preference number: 4 (lower is better) Translates to: IMRHRLEMPAFNYTKPHCAGWQT*PPRWGI Trigger: GATACCCCAACGAGGAGGGCATGTTTGCCAGCCAGC...GCAGTGTGGCTTAGTATAATTAAATGCAGGCATCTCGAGTCTGTGTCTCATGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR CCA 90 bp | GGGGAGCTAGGTATGTTCTCTAATGTATCTGCAGCAGTTGATAGTCAATGCAACACATGCCCTCCTCGTTaGGGTATCCCGCGATTATGC | + |
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Preference number: 4 (lower is better) Translates to: GELGMFSNVSAAVDSQCNTCPPR*GIPRLC Trigger: GCATAATCGCGGGATACCCCAACGAGGAGGGCATGT...GTTGCATTGACTATCAACTGCTGCAGATACATTAGAGAACATACCTAGCTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR TCA 90 bp | TCAATGCAACAGAAGATTTGCTTTGTCTGTGGTACAAGGATATGTCCTATCAGAGGAGCCCAGGCTAGATaGGTTGGAACACAGGACCGG | + |
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Preference number: 4 (lower is better) Translates to: SMQQKICFVCGTRICPIRGAQAR*VGTQDR Trigger: CCGGTCCTGTGTTCCAACTCATCTAGCCTGGGCTCC...TCTGATAGGACATATCCTTGTACCACAGACAAAGCAAATCTTCTGTTGCATTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR GCA 90 bp | ACATTTTATATCCACTTGGTGATTTCAGGCACTGTGGCTGTTCAAGATAAACTAGACTGGGAGAAGGGGTaGAAGCCTTGCGCTGTGGCG | + |
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Preference number: 4 (lower is better) Translates to: TFYIHLVISGTVAVQDKLDWEKG*KPCAVA Trigger: CGCCACAGCGCAAGGCTTGCACCCCTTCTCCCAGTC...TAGTTTATCTTGAACAGCCACAGTGCCTGAAATCACCAAGTGGATATAAAATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR GCA 90 bp | GTCATATATAGGAACAAGTGTATTTGGAATACGTTCGCTTTCTCCAATTTCACTCGGGCAGCAGCTCCTTaGTGTCCCCCTTTGACCCGC | + |
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Preference number: 4 (lower is better) Translates to: VIYRNKCIWNTFAFSNFTRAAAP*CPPLTR Trigger: GCGGGTCAAAGGGGGACAGCAAGGAGCTGCTGCCCG...AGTGAAATTGGAGAAAGCGAACGTATTCCAAATACACTTGTTCCTATATATGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR CCA 90 bp | CACTCTGGAGACATCTTGAGTAAAAACGTCTTATCAAGTTTGCTCTTGGTAGCACTGTCTGCTGGAGGGTaGCTGCACCGATTCCTGACA | + |
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Preference number: 4 (lower is better) Translates to: HSGDILSKNVLSSLLLVALSAGG*LHRFLT Trigger: TGTCAGGAATCGGTGCAGCCACCCTCCAGCAGACAG...TGCTACCAAGAGCAAACTTGATAAGACGTTTTTACTCAAGATGTCTCCAGAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR CCA 90 bp | CTTTGTCTGTGGTACAAGGATATGTCCTATCAGACTCTACTGCATTTTATCTACGAGTCCCCTGTCTGCTaGAGGGTGGCTGCACCGATT | + |
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Preference number: 4 (lower is better) Translates to: LCLWYKDMSYQTLLHFIYESPVC*RVAAPI Trigger: AATCGGTGCAGCCACCCTCCAGCAGACAGGGGACTC...GTAGATAAAATGCAGTAGAGTCTGATAGGACATATCCTTGTACCACAGACAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR CCA 90 bp | TTGCTTTGTCTGTGGTACAAGGATATGTCCTATCAGACTCTACTGCATTTTATCGCGTGCTCAGAGCTGTaGTCACTATCGCGGCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: LLCLWYKDMSYQTLLHFIACSEL*SLSRLS Trigger: GGACAGCCGCGATAGTGACCACAGCTCTGAGCACGC...GATAAAATGCAGTAGAGTCTGATAGGACATATCCTTGTACCACAGACAAAGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR CCA 90 bp | AGCCAAAGCAAACATCCATCTCCCTCTCTGTCATATATAGGAACAAGTGTATTTCCCTGTGATGCTGGCTaGCAAACATGCCCTCCTCGT | + |
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Preference number: 4 (lower is better) Translates to: SQSKHPSPSLSYIGTSVFPCDAG*QTCPPR Trigger: ACGAGGAGGGCATGTTTGCCAGCCAGCATCACAGGG...AAATACACTTGTTCCTATATATGACAGAGAGGGAGATGGATGTTTGCTTTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR GCA 90 bp | ACATTTTATATCCACTTGGTGATTTCAGGCACTGTGGCTGTTCAAGATAAACTAGACATCTGCGGGAGGTaGCAGTTGCTTTGCAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: TFYIHLVISGTVAVQDKLDICGR*QLLCRA Trigger: GGCTCTGCAAAGCAACTGGCACCTCCCGCAGATGTC...TAGTTTATCTTGAACAGCCACAGTGCCTGAAATCACCAAGTGGATATAAAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR GCA 90 bp | GCTGGAGGGGAGCTAGGTATGTTCTCTAATGTATCTGCAGCAGTTGATAGTCAACGCTTTTCCTTTTGCTaGCACTTCTCTTCTCTACGT | + |
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Preference number: 4 (lower is better) Translates to: AGGELGMFSNVSAAVDSQRFSFC*HFSSLR Trigger: ACGTAGAGAAGAGAAGTGGCAGCAAAAGGAAAAGCG...TTGACTATCAACTGCTGCAGATACATTAGAGAACATACCTAGCTCCCCTCCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR CCA 90 bp | CACTCTGGAGACATCTTGAGTAAAAACGTCTTATCAAGTTTGCTCTTGGTAGCATGGTCAGATCTTCCATaGAGGGCCAGAGAAGACTGG | + |
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Preference number: 4 (lower is better) Translates to: HSGDILSKNVLSSLLLVAWSDLP*RAREDW Trigger: CCAGTCTTCTCTGGCCCTCCATGGAAGATCTGACCA...TGCTACCAAGAGCAAACTTGATAAGACGTTTTTACTCAAGATGTCTCCAGAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR TCA 90 bp | AATCAGACATTTGCCGCACAAGACTCGTTCTGCAAGGTAACTGATTTGCCTATGTCACCTGTCTTTCAGTaGGGTCTAGATTCACTGCTA | + |
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Preference number: 4 (lower is better) Translates to: NQTFAAQDSFCKVTDLPMSPVFQ*GLDSLL Trigger: TAGCAGTGAATCTAGACCTCACTGAAAGACAGGTGA...CATAGGCAAATCAGTTACCTTGCAGAACGAGTCTTGTGCGGCAAATGTCTGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR GCA 90 bp | AATACAAGAAGCTGGCTGTGTTTGTCAATGGAAAAGCCTATTTTTAATCAGCTAGGTGGAGAGGACATCTaGGGGAGGTGCCAGTTGCTT | + |
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Preference number: 4 (lower is better) Translates to: NTRSWLCLSMEKPIFNQLGGEDI*GRCQLL Trigger: AAGCAACTGGCACCTCCCGCAGATGTCCTCTCCACC...TAGCTGATTAAAAATAGGCTTTTCCATTGACAAACACAGCCAGCTTCTTGTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR TCA 90 bp | ATTTGGAATACGTTCGCTTTCTCCAATTTCACTGTGGAAGCATCTTCAATAAAACTTGCTGTCCCCCTTTaGCCCGCTTCCACTTCATTC | + |
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Preference number: 4 (lower is better) Translates to: IWNTFAFSNFTVEASSIKLAVPL*PASTSF Trigger: GAATGAAGTGGAAGCGGGTCAAAGGGGGACAGCAAG...TTTTATTGAAGATGCTTCCACAGTGAAATTGGAGAAAGCGAACGTATTCCAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| 3UTR CAA 72 bp | GCAGCAGTTGATAGTCAATGCAACAGAAGATTTGCTTaGTCTGTGGTACAAGGATATGTCCTATCAGACTCT | + |
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Preference number: 4 (lower is better) Translates to: AAVDSQCNRRFA*SVVQGYVLSDS Trigger: AGAGTCTGATAGGACATATCCTTGTACCACAGACAAAGCAAATCTTCTGTTGCATTGACTATCAACTGCTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR TCA 90 bp | CACTCTGGAGACATCTTGAGTAAAAACGTCTTATCAAGTTTGCTCTTGGTAGCATTTGCTGTTCACTTCTaGCTTGTAGTTTCCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HSGDILSKNVLSSLLLVAFAVHF*LVVSFL Trigger: CAGGAAGGAAACTACAAGTCAGAAGTGAACAGCAAA...TGCTACCAAGAGCAAACTTGATAAGACGTTTTTACTCAAGATGTCTCCAGAGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR GCA 90 bp | TTGCTTTGTCTGTGGTACAAGGATATGTCCTATCAGACTCTACTGCATTTTATCTGTCGCTTTTCCTTTTaGTGCCACTTCTCTTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LLCLWYKDMSYQTLLHFICRFSF*CHFSSL Trigger: TAGAGAAGAGAAGTGGCAGCAAAAGGAAAAGCGACA...GATAAAATGCAGTAGAGTCTGATAGGACATATCCTTGTACCACAGACAAAGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR CCA 90 bp | TTGCTTTGTCTGTGGTACAAGGATATGTCCTATCAGACTCTACTGCATTTTATCCATATCTTCTCAGTCTaGTCAGATAATTATGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLCLWYKDMSYQTLLHFIHIFSV*SDNYDG Trigger: CCCATCATAATTATCTGACCAGACTGAGAAGATATG...GATAAAATGCAGTAGAGTCTGATAGGACATATCCTTGTACCACAGACAAAGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR GCA 90 bp | TTGCTTTGTCTGTGGTACAAGGATATGTCCTATCAGACTCTACTGCATTTTATCTCTAGTTCTCTGATTTaGTCTTTGGTAAAAGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLCLWYKDMSYQTLLHFISSSLI*SLVKAV Trigger: AACAGCTTTTACCAAAGAGCAAATCAGAGAACTAGA...GATAAAATGCAGTAGAGTCTGATAGGACATATCCTTGTACCACAGACAAAGCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| 3UTR CAA 72 bp | GATATGTCCTATCAGACTCTACTGCATTTTATCTACTaGAACACAAGTAAGCACATACTGATTTTCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: DMSYQTLLHFIY*NTSKHILIFSV Trigger: GACAGAGAAAATCAGTATGTGCTTACTTGTGTTCAAGTAGATAAAATGCAGTAGAGTCTGATAGGACATATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS GCA 90 bp | CCCAGCTCCGGGGGCCCTCCCGAATCAGGCTGCAGGCACAGGCTGTaGCGGGCCGCGCTTGGTGGAGAGGACATCTGCGGGAGGTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PSSGGPPESGCRHRL*RAALGGEDICGRCQ Trigger: CTGGCACCTCCCGCAGATGTCCTCTCCACCAAGCGCGGCCCGGCACAGCCTGTGCCTGCAGCCTGATTCGGGAGGGCCCCCGGAGCTGGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS GCA 90 bp | ACCGGAGGGCTGCTTCCCAGCTCCGGGGGCCCTCCCGAATCAGGCTaGAGGCACAGGCTGTGCCGGGCCGCGCTTGGTGGAGAGGACATC | + |
|
Preference number: 5 (lower is better) Translates to: TGGLLPSSGGPPESG*RHRLCRAALGGEDI Trigger: GATGTCCTCTCCACCAAGCGCGGCCCGGCACAGCCTGTGCCTGCAGCCTGATTCGGGAGGGCCCCCGGAGCTGGGAAGCAGCCCTCCGGT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS GCA 90 bp | TGCAGGCACAGGCTGTGCCGGGCCGCGCTTGGTGGAGAGGACATCTaGGGGAGGTGCCAGTTGCTTTGCAGAGCCTGGTGCTGCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CRHRLCRAALGGEDI*GRCQLLCRAWCCCC Trigger: GCAGCAGCAGCACCAGGCTCTGCAAAGCAACTGGCACCTCCCGCAGATGTCCTCTCCACCAAGCGCGGCCCGGCACAGCCTGTGCCTGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS CCA 90 bp | CCCTCCCGAATCAGGCTGCAGGCACAGGCTGTGCCGGGCCGCGCTTaGTGGAGAGGACATCTGCGGGAGGTGCCAGTTGCTTTGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PSRIRLQAQAVPGRA*WRGHLREVPVALQS Trigger: GCTCTGCAAAGCAACTGGCACCTCCCGCAGATGTCCTCTCCACCAAGCGCGGCCCGGCACAGCCTGTGCCTGCAGCCTGATTCGGGAGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS CCA 90 bp | TCCCGAATCAGGCTGCAGGCACAGGCTGTGCCGGGCCGCGCTTGGTaGAGAGGACATCTGCGGGAGGTGCCAGTTGCTTTGCAGAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SRIRLQAQAVPGRAW*RGHLREVPVALQSL Trigger: CAGGCTCTGCAAAGCAACTGGCACCTCCCGCAGATGTCCTCTCCACCAAGCGCGGCCCGGCACAGCCTGTGCCTGCAGCCTGATTCGGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS CCA 90 bp | CGCGGCTGTCCTCGTTTGCTAGTGAGTCCCCTGTCTGCTGGAGGGTaGCTGCACCGATTCCTGACAGCTCTGACGGAAGAAGCGTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RGCPRLLVSPLSAGG*LHRFLTALTEEAFP Trigger: AGGGAACGCTTCTTCCGTCAGAGCTGTCAGGAATCGGTGCAGCCACCCTCCAGCAGACAGGGGACTCACTAGCAAACGAGGACAGCCGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS CCA 90 bp | GATGGTGATGGTGGTGGTGGTGGTGGTGCCCCCTGTGATGCTGGCTaGCAAACATGCCCTCCTCGTTGGGGTATCCCGCGATTATGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: DGDGGGGGGAPCDAG*QTCPPRWGIPRLCK Trigger: CTTGCATAATCGCGGGATACCCCAACGAGGAGGGCATGTTTGCCAGCCAGCATCACAGGGGGCACCACCACCACCACCACCATCACCATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS GCA 90 bp | TGGTCACTATCGCGGCTGTCCTCGTTTGCTAGTGAGTCCCCTGTCTaGTGGAGGGTGGCTGCACCGATTCCTGACAGCTCTGACGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: WSLSRLSSFASESPV*WRVAAPIPDSSDGR Trigger: TCTTCCGTCAGAGCTGTCAGGAATCGGTGCAGCCACCCTCCAGCAGACAGGGGACTCACTAGCAAACGAGGACAGCCGCGATAGTGACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS CCA 90 bp | TCACTATCGCGGCTGTCCTCGTTTGCTAGTGAGTCCCCTGTCTGCTaGAGGGTGGCTGCACCGATTCCTGACAGCTCTGACGGAAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLSRLSSFASESPVC*RVAAPIPDSSDGRS Trigger: GCTTCTTCCGTCAGAGCTGTCAGGAATCGGTGCAGCCACCCTCCAGCAGACAGGGGACTCACTAGCAAACGAGGACAGCCGCGATAGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS GCA 90 bp | GCTGGCTGGCAAACATGCCCTCCTCGTTGGGGTATCCCGCGATTATaGAAGACGAGGAAGATGTGGAGAGTTCGGGGTAGGACATGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: AGWQTCPPRWGIPRL*KTRKMWRVRGRTCG Trigger: ACCACATGTCCTACCCCGAACTCTCCACATCTTCCTCGTCTTGCATAATCGCGGGATACCCCAACGAGGAGGGCATGTTTGCCAGCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS CCA 90 bp | CCTCCTCGTTGGGGTATCCCGCGATTATGCAAGACGAGGAAGATGTaGAGAGTTCGGGGTAGGACATGTGGTCAGATCTTCCATGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PPRWGIPRLCKTRKM*RVRGRTCGQIFHGG Trigger: CCCTCCATGGAAGATCTGACCACATGTCCTACCCCGAACTCTCCACATCTTCCTCGTCTTGCATAATCGCGGGATACCCCAACGAGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS GCA 90 bp | TGTAGTTTCCTTCCTGGGAATCTGAGCTGTCGCTTTTCCTTTTGCTaGCACTTCTCTTCTCTACGTCTGCGGGTGACAGCGCTTGACGGC | + |
|
Preference number: 5 (lower is better) Translates to: CSFLPGNLSCRFSFC*HFSSLRLRVTALDG Trigger: GCCGTCAAGCGCTGTCACCCGCAGACGTAGAGAAGAGAAGTGGCAGCAAAAGGAAAAGCGACAGCTCAGATTCCCAGGAAGGAAACTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR CAA 90 bp | GGGGAGCTAGGTATGTTCTCTAATGTATCTGCAGCAGTTGATAGTCAATGCAACTCGGGCAGCAGCTCCTaGCTGTCCCCCTTTGACCCG | + |
|
Preference number: 5 (lower is better) Translates to: GELGMFSNVSAAVDSQCNSGSSS*LSPFDP Trigger: CGGGTCAAAGGGGGACAGCAAGGAGCTGCTGCCCGA...GTTGCATTGACTATCAACTGCTGCAGATACATTAGAGAACATACCTAGCTCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR CAA 90 bp | TCAATGCAACAGAAGATTTGCTTTGTCTGTGGTACAAGGATATGTCCTATCAGAGAAGGGGTGCAAGCCTaGCGCTGTGGCGTGGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SMQQKICFVCGTRICPIREGVQA*RCGVGA Trigger: AGCCCCCACGCCACAGCGCAAGGCTTGCACCCCTTC...TCTGATAGGACATATCCTTGTACCACAGACAAAGCAAATCTTCTGTTGCATTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR CAA 90 bp | AATCAGACATTTGCCGCACAAGACTCGTTCTGCAAGGTAACTGATTTGCCTATGGAGGTGCCAGTTGCTTaGCAGAGCCTGGTGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NQTFAAQDSFCKVTDLPMEVPVA*QSLVLL Trigger: CAGCAGCACCAGGCTCTGCAAAGCAACTGGCACCTC...CATAGGCAAATCAGTTACCTTGCAGAACGAGTCTTGTGCGGCAAATGTCTGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR CAA 90 bp | AATCAGACATTTGCCGCACAAGACTCGTTCTGCAAGGTAACTGATTTGCCTATGAACATGCCCTCCTCGTaGGGGTATCCCGCGATTATG | + |
|
Preference number: 5 (lower is better) Translates to: NQTFAAQDSFCKVTDLPMNMPSS*GYPAIM Trigger: CATAATCGCGGGATACCCCAACGAGGAGGGCATGTT...CATAGGCAAATCAGTTACCTTGCAGAACGAGTCTTGTGCGGCAAATGTCTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR CAA 90 bp | ATCATGAGACACAGACTCGAGATGCCTGCATTTAATTATACTAAGCCACACTGCCCTTGCTGTCCCCCTTaGACCCGCTTCCACTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: IMRHRLEMPAFNYTKPHCPCCPP*TRFHFI Trigger: AATGAAGTGGAAGCGGGTCAAAGGGGGACAGCAAGG...GCAGTGTGGCTTAGTATAATTAAATGCAGGCATCTCGAGTCTGTGTCTCATGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR CAA 90 bp | ATTTGGAATACGTTCGCTTTCTCCAATTTCACTGTGGAAGCATCTTCAATAAAATGCGGGAGGTGCCAGTaGCTTTGCAGAGCCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: IWNTFAFSNFTVEASSIKCGRCQ*LCRAWC Trigger: GCACCAGGCTCTGCAAAGCAACTGGCACCTCCCGCA...TTTTATTGAAGATGCTTCCACAGTGAAATTGGAGAAAGCGAACGTATTCCAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR CAA 90 bp | TTGCTTTGTCTGTGGTACAAGGATATGTCCTATCAGACTCTACTGCATTTTATCCTTTCCTTCCTAGGTTaGCTGTTCACTTCTGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLCLWYKDMSYQTLLHFILSFLG*LFTSDL Trigger: CAAGTCAGAAGTGAACAGCAAACCTAGGAAGGAAAG...GATAAAATGCAGTAGAGTCTGATAGGACATATCCTTGTACCACAGACAAAGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS-3UTR CAA 90 bp | TCTCTAATGTATCTGCAGCAGTTGATAGTCAATGCAACAGAAGATTTGCTTTGTTCTCTGATTTGCTCTTaGGTAAAAGCTGTTCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLMYLQQLIVNATEDLLCSLICS*VKAVLS Trigger: GGAAAGAACAGCTTTTACCAAAGAGCAAATCAGAGA...ACAAAGCAAATCTTCTGTTGCATTGACTATCAACTGCTGCAGATACATTAGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS GCA 72 bp | GGGGGCCCTCCCGAATCAGGCTGCAGGCACAGGCTGTaGCGGGCCGCGCTTGGTGGAGAGGACATCTGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: GGPPESGCRHRL*RAALGGEDICG Trigger: CCCGCAGATGTCCTCTCCACCAAGCGCGGCCCGGCACAGCCTGTGCCTGCAGCCTGATTCGGGAGGGCCCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS GCA 72 bp | CTGCTTCCCAGCTCCGGGGGCCCTCCCGAATCAGGCTaGAGGCACAGGCTGTGCCGGGCCGCGCTTGGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LLPSSGGPPESG*RHRLCRAALGG Trigger: TCCACCAAGCGCGGCCCGGCACAGCCTGTGCCTGCAGCCTGATTCGGGAGGGCCCCCGGAGCTGGGAAGCAG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS CAA 90 bp | GCCCTCCCGAATCAGGCTGCAGGCACAGGCTGTGCCGGGCCGCGCTaGGTGGAGAGGACATCTGCGGGAGGTGCCAGTTGCTTTGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: ALPNQAAGTGCAGPR*VERTSAGGASCFAE Trigger: CTCTGCAAAGCAACTGGCACCTCCCGCAGATGTCCTCTCCACCAAGCGCGGCCCGGCACAGCCTGTGCCTGCAGCCTGATTCGGGAGGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS GCA 72 bp | CGGGCCGCGCTTGGTGGAGAGGACATCTGCGGGAGGTaGCAGTTGCTTTGCAGAGCCTGGTGCTGCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RAALGGEDICGR*QLLCRAWCCCC Trigger: GCAGCAGCAGCACCAGGCTCTGCAAAGCAACTGGCACCTCCCGCAGATGTCCTCTCCACCAAGCGCGGCCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS CCA 72 bp | AGGCTGCAGGCACAGGCTGTGCCGGGCCGCGCTTGGTaGAGAGGACATCTGCGGGAGGTGCCAGTTGCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: RLQAQAVPGRAW*RGHLREVPVAL Trigger: CAAAGCAACTGGCACCTCCCGCAGATGTCCTCTCCACCAAGCGCGGCCCGGCACAGCCTGTGCCTGCAGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS CCA 72 bp | ATCAGGCTGCAGGCACAGGCTGTGCCGGGCCGCGCTTaGTGGAGAGGACATCTGCGGGAGGTGCCAGTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: IRLQAQAVPGRA*WRGHLREVPVA Trigger: AGCAACTGGCACCTCCCGCAGATGTCCTCTCCACCAAGCGCGGCCCGGCACAGCCTGTGCCTGCAGCCTGAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS CAA 72 bp | AATCAGGCTGCAGGCACAGGCTGTGCCGGGCCGCGCTaGGTGGAGAGGACATCTGCGGGAGGTGCCAGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: NQAAGTGCAGPR*VERTSAGGASC Trigger: GCAACTGGCACCTCCCGCAGATGTCCTCTCCACCAAGCGCGGCCCGGCACAGCCTGTGCCTGCAGCCTGATT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS GCA 72 bp | GGTGGTGGTGCCCCCTGTGATGCTGGCTGGCAAACATaGCCTCCTCGTTGGGGTATCCCGCGATTATGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: GGGAPCDAGWQT*PPRWGIPRLCK Trigger: CTTGCATAATCGCGGGATACCCCAACGAGGAGGGCATGTTTGCCAGCCAGCATCACAGGGGGCACCACCACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS GCA 72 bp | TCGCGGCTGTCCTCGTTTGCTAGTGAGTCCCCTGTCTaGTGGAGGGTGGCTGCACCGATTCCTGACAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SRLSSFASESPV*WRVAAPIPDSS Trigger: AGAGCTGTCAGGAATCGGTGCAGCCACCCTCCAGCAGACAGGGGACTCACTAGCAAACGAGGACAGCCGCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS CCA 72 bp | CGGCTGTCCTCGTTTGCTAGTGAGTCCCCTGTCTGCTaGAGGGTGGCTGCACCGATTCCTGACAGCTCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: RLSSFASESPVC*RVAAPIPDSSD Trigger: GTCAGAGCTGTCAGGAATCGGTGCAGCCACCCTCCAGCAGACAGGGGACTCACTAGCAAACGAGGACAGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS CCA 72 bp | ATGTGGTCAGATCTTCCATGGAGGGCCAGAGAAGACTaGGAGAAGGGGTGCAAGCCTTGCGCTGTGGCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: MWSDLPWRARED*EKGCKPCAVAW Trigger: CCACGCCACAGCGCAAGGCTTGCACCCCTTCTCCCAGTCTTCTCTGGCCCTCCATGGAAGATCTGACCACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS TCA 72 bp | CCTTTTGCTGCCACTTCTCTTCTCTACGTCTGCGGGTaGCAGCGCTTGACGGCCATAATCCCCTGGTGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: PFAATSLLYVCG*QRLTAIIPWCA Trigger: TGCGCACCAGGGGATTATGGCCGTCAAGCGCTGTCACCCGCAGACGTAGAGAAGAGAAGTGGCAGCAAAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS GCA 72 bp | CAAACATGCCCTCCTCGTTGGGGTATCCCGCGATTATaGAAGACGAGGAAGATGTGGAGAGTTCGGGGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: QTCPPRWGIPRL*KTRKMWRVRGR Trigger: CCTACCCCGAACTCTCCACATCTTCCTCGTCTTGCATAATCGCGGGATACCCCAACGAGGAGGGCATGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS GCA 72 bp | CTTCCTGGGAATCTGAGCTGTCGCTTTTCCTTTTGCTaGCACTTCTCTTCTCTACGTCTGCGGGTGACAGCG | + |
|
Preference number: 6 (lower is better) Translates to: LPGNLSCRFSFC*HFSSLRLRVTA Trigger: CGCTGTCACCCGCAGACGTAGAGAAGAGAAGTGGCAGCAAAAGGAAAAGCGACAGCTCAGATTCCCAGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS GCA 72 bp | ACATTCACCAGTTCCTTTTCTCGGGCAGCAGCTCCTTaGTGTCCCCCTTTGACCCGCTTCCACTTCATTCTC | + |
|
Preference number: 6 (lower is better) Translates to: TFTSSFSRAAAP*CPPLTRFHFIL Trigger: GAGAATGAAGTGGAAGCGGGTCAAAGGGGGACAGCAAGGAGCTGCTGCCCGAGAAAAGGAACTGGTGAATGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS CAA 72 bp | CACATTCACCAGTTCCTTTTCTCGGGCAGCAGCTCCTaGCTGTCCCCCTTTGACCCGCTTCCACTTCATTCT | + |
|
Preference number: 6 (lower is better) Translates to: HIHQFLFSGSSS*LSPFDPLPLHS Trigger: AGAATGAAGTGGAAGCGGGTCAAAGGGGGACAGCAAGGAGCTGCTGCCCGAGAAAAGGAACTGGTGAATGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS CCA 72 bp | TGGGGTATCCCGCGATTATGCAAGACGAGGAAGATGTaGAGAGTTCGGGGTAGGACATGTGGTCAGATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: WGIPRLCKTRKM*RVRGRTCGQIF Trigger: GAAGATCTGACCACATGTCCTACCCCGAACTCTCCACATCTTCCTCGTCTTGCATAATCGCGGGATACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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| CDS CAA 72 bp | TTTCCTTCCTGGGAATCTGAGCTGTCGCTTTTCCTTTaGCTGCCACTTCTCTTCTCTACGTCTGCGGGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: FPSWESELSLFL*LPLLFSTSAGD Trigger: GTCACCCGCAGACGTAGAGAAGAGAAGTGGCAGCAAAAGGAAAAGCGACAGCTCAGATTCCCAGGAAGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041183.7 |
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