Pregenerated sensors for MELTF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022780Ensembl transcript IDs: ENSMUST00000023464.6
Found 225 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | CACCCCAGCCAGCCAGGAGGCTCCAGGTGGGAGGCACAGGTTCGCTaGTGGCGCCACCGGTGTGGGAGGAGTGACTGGGCTACTCGCCAG | + |
Preference number: 1 (lower is better) Translates to: HPSQPGGSRWEAQVR*WRHRCGRSDWATRQ Trigger: CTGGCGAGTAGCCCAGTCACTCCTCCCACACCGGTGGCGCCAGCAGCGAACCTGTGCCTCCCACCTGGAGCCTCCTGGCTGGCTGGGGTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR CCA 90 bp | CCCAGCCAGCCAGGAGGCTCCAGGTGGGAGGCACAGGTTCGCTGCTaGCGCCACCGGTGTGGGAGGAGTGACTGGGCTACTCGCCAGTCG | + |
Preference number: 1 (lower is better) Translates to: PSQPGGSRWEAQVRC*RHRCGRSDWATRQS Trigger: CGACTGGCGAGTAGCCCAGTCACTCCTCCCACACCGGTGGCGCCAGCAGCGAACCTGTGCCTCCCACCTGGAGCCTCCTGGCTGGCTGGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR CCA 90 bp | CCGACGGTGTGGCCTTGGTGGACAAGTGCCCATAGGAGAGAGCGGTaGGGCAGCGAGAGCAGGGGCTGCTGGGTGGTAGTGTGTCGCACA | + |
Preference number: 1 (lower is better) Translates to: PTVWPWWTSAHRRER*GSESRGCWVVVCRT Trigger: TGTGCGACACACTACCACCCAGCAGCCCCTGCTCTCGCTGCCCCACCGCTCTCTCCTATGGGCACTTGTCCACCAAGGCCACACCGTCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR CCA 90 bp | AGTGCCCATAGGAGAGAGCGGTGGGGCAGCGAGAGCAGGGGCTGCTaGGTGGTAGTGTGTCGCACAGGTTCCCTAGGTTGGTGGTGTGCT | + |
Preference number: 1 (lower is better) Translates to: SAHRRERWGSESRGC*VVVCRTGSLGWWCA Trigger: AGCACACCACCAACCTAGGGAACCTGTGCGACACACTACCACCCAGCAGCCCCTGCTCTCGCTGCCCCACCGCTCTCTCCTATGGGCACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR CCA 90 bp | GACTCTGGCTGGGACACTGCCAGGACCTTCTCTACTGGTGAGCCATaGAAAGGATCTGTCCCGTCGTCGCCCACAGGTGGGGGCGAGCCA | + |
Preference number: 1 (lower is better) Translates to: DSGWDTARTFSTGEP*KGSVPSSPTGGGEP Trigger: TGGCTCGCCCCCACCTGTGGGCGACGACGGGACAGATCCTTTCCATGGCTCACCAGTAGAGAAGGTCCTGGCAGTGTCCCAGCCAGAGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR TCA 90 bp | CCTTGCCTCTCCTCATCCCGCCCCGCGCTCTCCTGCAGGGTTAGCTaGTGTCCTGGTTTCTTCCGGTTGAGCTCTGTAGCTTTCCCTGCT | + |
Preference number: 1 (lower is better) Translates to: PCLSSSRPALSCRVS*CPGFFRLSSVAFPA Trigger: AGCAGGGAAAGCTACAGAGCTCAACCGGAAGAAACCAGGACATCAGCTAACCCTGCAGGAGAGCGCGGGGCGGGATGAGGAGAGGCAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR GCA 90 bp | CGAGAGAACCAGGGATCCTCTCGAAAGATGCAACTGCCCAACAGGTaGAGGGTGAAGGGAAGACAGGGCTCTCCCCAATCCCCTGGCTCG | + |
Preference number: 1 (lower is better) Translates to: RENQGSSRKMQLPNR*RVKGRQGSPQSPGS Trigger: CGAGCCAGGGGATTGGGGAGAGCCCTGTCTTCCCTTCACCCTGCACCTGTTGGGCAGTTGCATCTTTCGAGAGGATCCCTGGTTCTCTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR CCA 90 bp | GTGTGCTCCTTCCTTGGCATCTCACCAGGTGGCCGGTACAGAGGCTaGAAGCTGCTCCACGGTTGCCATGGCAACCAGCATCTTCACTCT | + |
Preference number: 1 (lower is better) Translates to: VCSFLGISPGGRYRG*KLLHGCHGNQHLHS Trigger: AGAGTGAAGATGCTGGTTGCCATGGCAACCGTGGAGCAGCTTCCAGCCTCTGTACCGGCCACCTGGTGAGATGCCAAGGAAGGAGCACAC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR TCA 90 bp | ACCAGGGATCCTCTCGAAAGATGCAACTGCCCAACAGGTGCAGGGTaGAGGGAAGACAGGGCTCTCCCCAATCCCCTGGCTCGTGGTATA | + |
Preference number: 1 (lower is better) Translates to: TRDPLERCNCPTGAG*REDRALPNPLARGI Trigger: TATACCACGAGCCAGGGGATTGGGGAGAGCCCTGTCTTCCCTTCACCCTGCACCTGTTGGGCAGTTGCATCTTTCGAGAGGATCCCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR TCA 90 bp | GGTGTGGGAGGAGTGACTGGGCTACTCGCCAGTCGCCTCAGGTATTaGGGGCTCCAGCAAGTGGGAAGACTTGGCCTTAACAATCATCCT | + |
Preference number: 1 (lower is better) Translates to: GVGGVTGLLASRLRY*GLQQVGRLGLNNHP Trigger: AGGATGATTGTTAAGGCCAAGTCTTCCCACTTGCTGGAGCCCTCAATACCTGAGGCGACTGGCGAGTAGCCCAGTCACTCCTCCCACACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR GCA 90 bp | TTCACACGGATAAGGTGTGTGCGTGTGCGTGTGCGCGTGCGTGCTTaGGTGGTGATGTGGGAAGGGGTATATGAAGGCAGGGAGAAAACT | + |
Preference number: 1 (lower is better) Translates to: FTRIRCVRVRVRVRA*VVMWEGVYEGREKT Trigger: AGTTTTCTCCCTGCCTTCATATACCCCTTCCCACATCACCACGCAAGCACGCACGCGCACACGCACACGCACACACCTTATCCGTGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR CCA 90 bp | GAGTACACTTCTCACTGTGAAGTCCCCAGCTCAGAGAAGAATGGATaGCTGTGTACTGGGAGGAGGAGGGGCTTGCTCTCCCAAGCACCA | + |
Preference number: 1 (lower is better) Translates to: EYTSHCEVPSSEKNG*LCTGRRRGLLSQAP Trigger: TGGTGCTTGGGAGAGCAAGCCCCTCCTCCTCCCAGTACACAGCCATCCATTCTTCTCTGAGCTGGGGACTTCACAGTGAGAAGTGTACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR TCA 90 bp | CACTTTGGGCAGCACAGTCGCCCACACAGAGTACACTTCTCACTGTaGAGTCCCCAGCTCAGAGAAGAATGGATGGCTGTGTACTGGGAG | + |
Preference number: 1 (lower is better) Translates to: HFGQHSRPHRVHFSL*SPQLREEWMAVYWE Trigger: CTCCCAGTACACAGCCATCCATTCTTCTCTGAGCTGGGGACTTCACAGTGAGAAGTGTACTCTGTGTGGGCGACTGTGCTGCCCAAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR GCA 90 bp | ACAGTACAGCTCTGGCCTTCCTCCCATCCCAGTCTAGCAAAATCTTaGTGTCCAGAGGGCTGGGCTCCTTGGTTGGTGTCACATCAGAAG | + |
Preference number: 1 (lower is better) Translates to: TVQLWPSSHPSLAKS*CPEGWAPWLVSHQK Trigger: CTTCTGATGTGACACCAACCAAGGAGCCCAGCCCTCTGGACAGCAAGATTTTGCTAGACTGGGATGGGAGGAAGGCCAGAGCTGTACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR CCA 90 bp | AGGTGTGTGCGTGTGCGTGTGCGCGTGCGTGCTTGCGTGGTGATGTaGGAAGGGGTATATGAAGGCAGGGAGAAAACTAATGTTGAGACT | + |
Preference number: 1 (lower is better) Translates to: RCVRVRVRVRACVVM*EGVYEGREKTNVET Trigger: AGTCTCAACATTAGTTTTCTCCCTGCCTTCATATACCCCTTCCCACATCACCACGCAAGCACGCACGCGCACACGCACACGCACACACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR CCA 90 bp | TTTCTGGTTCTCGAGAGAACAATGGCAAAATGGCAGCCTAGGCCTTaGCTCTCACAGTTCGAGAGAACCAGGGATCCTCTCGAAAGATGC | + |
Preference number: 1 (lower is better) Translates to: FLVLERTMAKWQPRP*LSQFERTRDPLERC Trigger: GCATCTTTCGAGAGGATCCCTGGTTCTCTCGAACTGTGAGAGCCAAGGCCTAGGCTGCCATTTTGCCATTGTTCTCTCGAGAACCAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR CCA 90 bp | CTGGGCTACTCGCCAGTCGCCTCAGGTATTGAGGGCTCCAGCAAGTaGGAAGACTTGGCCTTAACAATCATCCTGATTCTAGAAATTTCT | + |
Preference number: 1 (lower is better) Translates to: LGYSPVASGIEGSSK*EDLALTIILILEIS Trigger: AGAAATTTCTAGAATCAGGATGATTGTTAAGGCCAAGTCTTCCCACTTGCTGGAGCCCTCAATACCTGAGGCGACTGGCGAGTAGCCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR CCA 90 bp | GAAGACTTGGCCTTAACAATCATCCTGATTCTAGAAATTTCTCTTTaGGTTAGAATCGCACCTCGGAGGCTTGTGTGTGTGTGTGAGTTC | + |
Preference number: 1 (lower is better) Translates to: EDLALTIILILEISL*VRIAPRRLVCVCEF Trigger: GAACTCACACACACACACAAGCCTCCGAGGTGCGATTCTAACCCAAAGAGAAATTTCTAGAATCAGGATGATTGTTAAGGCCAAGTCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR CCA 90 bp | ATTTTAAAAAGAAACCAATGTCTTTCTTTAGCACAAACACAGCAGTaGCCCATGGCAATCAGACGTCATTTACACAACGCTCTTCAAAGT | + |
Preference number: 1 (lower is better) Translates to: ILKRNQCLSLAQTQQ*PMAIRRHLHNALQS Trigger: ACTTTGAAGAGCGTTGTGTAAATGACGTCTGATTGCCATGGGCCACTGCTGTGTTTGTGCTAAAGAAAGACATTGGTTTCTTTTTAAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR-3UTR TCA 90 bp | GCCATGGAAAGGATCTGTCCCGTCGTCGCCCACAGGTGGGGGCGAGCCACTGGGCCAACAGGTGCAGGGTaGAGGGAAGACAGGGCTCTC | + |
Preference number: 2 (lower is better) Translates to: AMERICPVVAHRWGRATGPTGAG*REDRAL Trigger: GAGAGCCCTGTCTTCCCTTCACCCTGCACCTGTTGG...CCCAGTGGCTCGCCCCCACCTGTGGGCGACGACGGGACAGATCCTTTCCATGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR-3UTR TCA 90 bp | GCCATGGAAAGGATCTGTCCCGTCGTCGCCCACAGGTGGGGGCGAGCCACTGGGGTCACATCAGAAGGCTaGTGTGCTCAGCAGCCTTGC | + |
Preference number: 2 (lower is better) Translates to: AMERICPVVAHRWGRATGVTSEG*CAQQPC Trigger: GCAAGGCTGCTGAGCACATCAGCCTTCTGATGTGAC...CCCAGTGGCTCGCCCCCACCTGTGGGCGACGACGGGACAGATCCTTTCCATGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR-3UTR CCA 90 bp | GCCATGGAAAGGATCTGTCCCGTCGTCGCCCACAGGTGGGGGCGAGCCACTGGGGCTGGGCTCCTTGGTTaGTGTCACATCAGAAGGCTG | + |
Preference number: 2 (lower is better) Translates to: AMERICPVVAHRWGRATGAGLLG*CHIRRL Trigger: CAGCCTTCTGATGTGACACCAACCAAGGAGCCCAGC...CCCAGTGGCTCGCCCCCACCTGTGGGCGACGACGGGACAGATCCTTTCCATGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR-3UTR GCA 90 bp | GTCGTCGCCCACAGGTGGGGGCGAGCCACTGGGAACCTGGCCTGTCATTGGGATGCAACAGTTTCATTGTaGAGTGAGGTCCAGGCAGCG | + |
Preference number: 2 (lower is better) Translates to: VVAHRWGRATGNLACHWDATVSL*SEVQAA Trigger: CGCTGCCTGGACCTCACTGCACAATGAAACTGTTGC...ATCCCAATGACAGGCCAGGTTCCCAGTGGCTCGCCCCCACCTGTGGGCGACGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR-3UTR GCA 90 bp | TGGTGTGCTCCTTCCTTGGCATCTCACCAGGTGGCCGGTACAGAGGCTGGAAGCCTCTGTAGCTTTCCCTaGTCTGGGCGTGGCCTGAAG | + |
Preference number: 2 (lower is better) Translates to: WCAPSLASHQVAGTEAGSLCSFP*SGRGLK Trigger: CTTCAGGCCACGCCCAGAGCAGGGAAAGCTACAGAG...GCTTCCAGCCTCTGTACCGGCCACCTGGTGAGATGCCAAGGAAGGAGCACACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR-3UTR GCA 90 bp | GTGTGCTCCTTCCTTGGCATCTCACCAGGTGGCCGGTACAGAGGCTGGAAGCTGTGTGAGTTCTCACCTTaGCTCTCCTCATCCCGCCCC | + |
Preference number: 2 (lower is better) Translates to: VCSFLGISPGGRYRGWKLCEFSP*LSSSRP Trigger: GGGGCGGGATGAGGAGAGGCAAGGTGAGAACTCACA...CAGCTTCCAGCCTCTGTACCGGCCACCTGGTGAGATGCCAAGGAAGGAGCACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR CAA 90 bp | CTCCTTGGTTGGTGTCACATCAGAAGGCTGATGTGCTCAGCAGCCTaGCCCCTCCGACGGTGTGGCCTTGGTGGACAAGTGCCCATAGGA | + |
Preference number: 2 (lower is better) Translates to: LLGWCHIRRLMCSAA*PLRRCGLGGQVPIG Trigger: TCCTATGGGCACTTGTCCACCAAGGCCACACCGTCGGAGGGGCAAGGCTGCTGAGCACATCAGCCTTCTGATGTGACACCAACCAAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR-3UTR GCA 90 bp | GGCACAGACATCACACTTTGGGCAGCACAGTCGCCCACACAGAGTACACTTCTCGTGCGCGTGCGTGCTTaGGTGGTGATGTGGGAAGGG | + |
Preference number: 2 (lower is better) Translates to: GTDITLWAAQSPTQSTLLVRVRA*VVMWEG Trigger: CCCTTCCCACATCACCACGCAAGCACGCACGCGCAC...GAGAAGTGTACTCTGTGTGGGCGACTGTGCTGCCCAAAGTGTGATGTCTGTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR-3UTR CCA 90 bp | AAGACACAAATAGCTCCCGGCCCACGCTGCTTCCAGTGTGCTGACGATGGCTGTGCTCCACGGTTGCCATaGCAACCAGCATCTTCACTC | + |
Preference number: 2 (lower is better) Translates to: KTQIAPGPRCFQCADDGCAPRLP*QPASSL Trigger: GAGTGAAGATGCTGGTTGCCATGGCAACCGTGGAGC...ACAGCCATCGTCAGCACACTGGAAGCAGCGTGGGCCGGGAGCTATTTGTGTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR-3UTR TCA 90 bp | AAGACACAAATAGCTCCCGGCCCACGCTGCTTCCAGTGTGCTGACGATGGCTGTGGCACTTCCTTCCTCTaGGGGTTTTGGAGGACTTCA | + |
Preference number: 2 (lower is better) Translates to: KTQIAPGPRCFQCADDGCGTSFL*GFWRTS Trigger: TGAAGTCCTCCAAAACCCTCAGAGGAAGGAAGTGCC...ACAGCCATCGTCAGCACACTGGAAGCAGCGTGGGCCGGGAGCTATTTGTGTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR-3UTR GCA 90 bp | TTGTGTGACTCTGGCTGGGACACTGCCAGGACCTTCTCTACTGGTGAGCCATGGAAGCTGCTCCACGGTTaGCATGGCAACCAGCATCTT | + |
Preference number: 2 (lower is better) Translates to: LCDSGWDTARTFSTGEPWKLLHG*HGNQHL Trigger: AAGATGCTGGTTGCCATGGCAACCGTGGAGCAGCTT...CCATGGCTCACCAGTAGAGAAGGTCCTGGCAGTGTCCCAGCCAGAGTCACACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR-3UTR CCA 90 bp | GATTTTCCTCAGGATTGTGTGACTCTGGCTGGGACACTGCCAGGACCTTCTCTAGGTGTGCTCCTTCCTTaGCATCTCACCAGGTGGCCG | + |
Preference number: 2 (lower is better) Translates to: DFPQDCVTLAGTLPGPSLGVLLP*HLTRWP Trigger: CGGCCACCTGGTGAGATGCCAAGGAAGGAGCACACC...TAGAGAAGGTCCTGGCAGTGTCCCAGCCAGAGTCACACAATCCTGAGGAAAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR CAA 90 bp | CACAGTACAGCTCTGGCCTTCCTCCCATCCCAGTCTAGCAAAATCTaGCTGTCCAGAGGGCTGGGCTCCTTGGTTGGTGTCACATCAGAA | + |
Preference number: 2 (lower is better) Translates to: HSTALAFLPSQSSKI*LSRGLGSLVGVTSE Trigger: TTCTGATGTGACACCAACCAAGGAGCCCAGCCCTCTGGACAGCAAGATTTTGCTAGACTGGGATGGGAGGAAGGCCAGAGCTGTACTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR-3UTR TCA 90 bp | AAACCAATGTCTTTCTTTAGCACAAACACAGCAGTGGCCCATGGCAATCAGACGCCGGTGTGGGAGGAGTaGCTGGGCTACTCGCCAGTC | + |
Preference number: 2 (lower is better) Translates to: KPMSFFSTNTAVAHGNQTPVWEE*LGYSPV Trigger: GACTGGCGAGTAGCCCAGTCACTCCTCCCACACCGG...CGTCTGATTGCCATGGGCCACTGCTGTGTTTGTGCTAAAGAAAGACATTGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR-3UTR GCA 90 bp | GTGTACTGGGAGGAGGAGGGGCTTGCTCTCCCAAGCACCATGGTGACCGATTTTGATCCTCTCGAAAGATaGAACTGCCCAACAGGTGCA | + |
Preference number: 2 (lower is better) Translates to: VYWEEEGLALPSTMVTDFDPLER*NCPTGA Trigger: TGCACCTGTTGGGCAGTTGCATCTTTCGAGAGGATC...AAAATCGGTCACCATGGTGCTTGGGAGAGCAAGCCCCTCCTCCTCCCAGTACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR CAA 90 bp | ACATTCTTAATGGGAAGGTGGGGGCACTTCCTTCCTCTGAGGGTTTaGGAGGACTTCATCCCCACAGTACAGCTCTGGCCTTCCTCCCAT | + |
Preference number: 2 (lower is better) Translates to: TFLMGRWGHFLPLRV*EDFIPTVQLWPSSH Trigger: ATGGGAGGAAGGCCAGAGCTGTACTGTGGGGATGAAGTCCTCCAAAACCCTCAGAGGAAGGAAGTGCCCCCACCTTCCCATTAAGAATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR-3UTR TCA 90 bp | AGACATCACACTTTGGGCAGCACAGTCGCCCACACAGAGTACACTTCTCACTGTTCCTGCAGGGTTAGCTaGTGTCCTGGTTTCTTCCGG | + |
Preference number: 2 (lower is better) Translates to: RHHTLGSTVAHTEYTSHCSCRVS*CPGFFR Trigger: CCGGAAGAAACCAGGACATCAGCTAACCCTGCAGGA...ACAGTGAGAAGTGTACTCTGTGTGGGCGACTGTGCTGCCCAAAGTGTGATGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR-3UTR TCA 90 bp | AGACATCACACTTTGGGCAGCACAGTCGCCCACACAGAGTACACTTCTCACTGTAGTTTCATTGTGCAGTaGGGTCCAGGCAGCGCAGAC | + |
Preference number: 2 (lower is better) Translates to: RHHTLGSTVAHTEYTSHCSFIVQ*GPGSAD Trigger: GTCTGCGCTGCCTGGACCTCACTGCACAATGAAACT...ACAGTGAGAAGTGTACTCTGTGTGGGCGACTGTGCTGCCCAAAGTGTGATGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR-3UTR TCA 90 bp | AGACATCACACTTTGGGCAGCACAGTCGCCCACACAGAGTACACTTCTCACTGTTGCGTGCTTGCGTGGTaGTGTGGGAAGGGGTATATG | + |
Preference number: 2 (lower is better) Translates to: RHHTLGSTVAHTEYTSHCCVLAW*CGKGYM Trigger: CATATACCCCTTCCCACATCACCACGCAAGCACGCA...ACAGTGAGAAGTGTACTCTGTGTGGGCGACTGTGCTGCCCAAAGTGTGATGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR-3UTR GCA 90 bp | GATTTTCCTCAGGATTGTGTGACTCTGGCTGGGACACTGCCAGGACCTTCTCTAATCAGAAGGCTGATGTaGTCAGCAGCCTTGCCCCTC | + |
Preference number: 2 (lower is better) Translates to: DFPQDCVTLAGTLPGPSLIRRLM*SAALPL Trigger: GAGGGGCAAGGCTGCTGAGCACATCAGCCTTCTGAT...TAGAGAAGGTCCTGGCAGTGTCCCAGCCAGAGTCACACAATCCTGAGGAAAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR-3UTR CCA 90 bp | GACATCACACTTTGGGCAGCACAGTCGCCCACACAGAGTACACTTCTCACTGTGGAGGGCTCCAGCAAGTaGGAAGACTTGGCCTTAACA | + |
Preference number: 2 (lower is better) Translates to: DITLWAAQSPTQSTLLTVEGSSK*EDLALT Trigger: TGTTAAGGCCAAGTCTTCCCACTTGCTGGAGCCCTC...CACAGTGAGAAGTGTACTCTGTGTGGGCGACTGTGCTGCCCAAAGTGTGATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR-3UTR CCA 90 bp | GATTTTCCTCAGGATTGTGTGACTCTGGCTGGGACACTGCCAGGACCTTCTCTAGAGGGCTGGGCTCCTTaGTTGGTGTCACATCAGAAG | + |
Preference number: 2 (lower is better) Translates to: DFPQDCVTLAGTLPGPSLEGWAP*LVSHQK Trigger: CTTCTGATGTGACACCAACCAAGGAGCCCAGCCCTC...TAGAGAAGGTCCTGGCAGTGTCCCAGCCAGAGTCACACAATCCTGAGGAAAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR-3UTR CCA 90 bp | CTAATGTTGAGACTGAGACCAGGAGAGCAAACAATAGAATCTCGGCAACAGTTTCCAGGAGGCTCCAGGTaGGAGGCACAGGTTCGCTGC | + |
Preference number: 2 (lower is better) Translates to: LMLRLRPGEQTIESRQQFPGGSR*EAQVRC Trigger: GCAGCGAACCTGTGCCTCCCACCTGGAGCCTCCTGG...AAACTGTTGCCGAGATTCTATTGTTTGCTCTCCTGGTCTCAGTCTCAACATTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR-3UTR CCA 90 bp | ACCCTGCATCAAGTTTCTCACACACTAACATTCTTAATGGGAAGGTGGGGGCACTGCTGTCCAGAGGGCTaGGCTCCTTGGTTGGTGTCA | + |
Preference number: 2 (lower is better) Translates to: TLHQVSHTLTFLMGRWGHCCPEG*APWLVS Trigger: TGACACCAACCAAGGAGCCCAGCCCTCTGGACAGCA...GTGCCCCCACCTTCCCATTAAGAATGTTAGTGTGTGAGAAACTTGATGCAGGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR-3UTR GCA 90 bp | GATTTTCCTCAGGATTGTGTGACTCTGGCTGGGACACTGCCAGGACCTTCTCTAAGTCTAGCAAAATCTTaGTGTCCAGAGGGCTGGGCT | + |
Preference number: 2 (lower is better) Translates to: DFPQDCVTLAGTLPGPSLSLAKS*CPEGWA Trigger: AGCCCAGCCCTCTGGACAGCAAGATTTTGCTAGACT...TAGAGAAGGTCCTGGCAGTGTCCCAGCCAGAGTCACACAATCCTGAGGAAAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR-3UTR GCA 90 bp | AGACATCACACTTTGGGCAGCACAGTCGCCCACACAGAGTACACTTCTCACTGTCTGACGATGGCTGTTTaGTCCTGTTTCTTCTCCTTT | + |
Preference number: 2 (lower is better) Translates to: RHHTLGSTVAHTEYTSHCLTMAV*SCFFSF Trigger: AAAGGAGAAGAAACAGGAGCAAACAGCCATCGTCAG...ACAGTGAGAAGTGTACTCTGTGTGGGCGACTGTGCTGCCCAAAGTGTGATGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR-3UTR TCA 90 bp | TGCTTCCAGTGTGCTGACGATGGCTGTTTGCTCCTGTTTCTTCTCCTTTTTATTCCAAGGCCCAGCTCATaGCAGGAAGTTATTTTGGGT | + |
Preference number: 2 (lower is better) Translates to: CFQCADDGCLLLFLLLFIPRPSS*QEVILG Trigger: ACCCAAAATAACTTCCTGTCATGAGCTGGGCCTTGG...AATAAAAAGGAGAAGAAACAGGAGCAAACAGCCATCGTCAGCACACTGGAAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR-3UTR CCA 90 bp | CTAATGTTGAGACTGAGACCAGGAGAGCAAACAATAGAATCTCGGCAACAGTTTCTAGAAATTTCTCTTTaGGTTAGAATCGCACCTCGG | + |
Preference number: 2 (lower is better) Translates to: LMLRLRPGEQTIESRQQFLEISL*VRIAPR Trigger: CCGAGGTGCGATTCTAACCCAAAGAGAAATTTCTAG...AAACTGTTGCCGAGATTCTATTGTTTGCTCTCCTGGTCTCAGTCTCAACATTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR GCA 72 bp | CAGCCAGGAGGCTCCAGGTGGGAGGCACAGGTTCGCTaGTGGCGCCACCGGTGTGGGAGGAGTGACTGGGCT | + |
Preference number: 3 (lower is better) Translates to: QPGGSRWEAQVR*WRHRCGRSDWA Trigger: AGCCCAGTCACTCCTCCCACACCGGTGGCGCCAGCAGCGAACCTGTGCCTCCCACCTGGAGCCTCCTGGCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
||
3UTR CCA 72 bp | CTGTCCCGTCGTCGCCCACAGGTGGGGGCGAGCCACTaGGAACCTGGCCTGTCATTGGGATCTGAGGCCCCC | + |
Preference number: 3 (lower is better) Translates to: LSRRRPQVGASH*EPGLSLGSEAP Trigger: GGGGGCCTCAGATCCCAATGACAGGCCAGGTTCCCAGTGGCTCGCCCCCACCTGTGGGCGACGACGGGACAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
||
3UTR CCA 72 bp | CCAGGAGGCTCCAGGTGGGAGGCACAGGTTCGCTGCTaGCGCCACCGGTGTGGGAGGAGTGACTGGGCTACT | + |
Preference number: 3 (lower is better) Translates to: PGGSRWEAQVRC*RHRCGRSDWAT Trigger: AGTAGCCCAGTCACTCCTCCCACACCGGTGGCGCCAGCAGCGAACCTGTGCCTCCCACCTGGAGCCTCCTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
||
3UTR-3UTR CAA 90 bp | GCCATGGAAAGGATCTGTCCCGTCGTCGCCCACAGGTGGGGGCGAGCCACTGGGTGGTGTGCTCCTTCCTaGGCATCTCACCAGGTGGCC | + |
Preference number: 3 (lower is better) Translates to: AMERICPVVAHRWGRATGWCAPS*ASHQVA Trigger: GGCCACCTGGTGAGATGCCAAGGAAGGAGCACACCA...CCCAGTGGCTCGCCCCCACCTGTGGGCGACGACGGGACAGATCCTTTCCATGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
||
3UTR CCA 72 bp | TGGCCTTGGTGGACAAGTGCCCATAGGAGAGAGCGGTaGGGCAGCGAGAGCAGGGGCTGCTGGGTGGTAGTG | + |
Preference number: 3 (lower is better) Translates to: WPWWTSAHRRER*GSESRGCWVVV Trigger: CACTACCACCCAGCAGCCCCTGCTCTCGCTGCCCCACCGCTCTCTCCTATGGGCACTTGTCCACCAAGGCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR CCA 72 bp | GCCATGGAAAGGATCTGTCCCGTCGTCGCCCACAGGTaGGGGCGAGCCACTGGGAACCTGGCCTGTCATTGG | + |
Preference number: 3 (lower is better) Translates to: AMERICPVVAHR*GRATGNLACHW Trigger: CCAATGACAGGCCAGGTTCCCAGTGGCTCGCCCCCACCTGTGGGCGACGACGGGACAGATCCTTTCCATGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR TCA 72 bp | ACAGGTTCGCTGCTGGCGCCACCGGTGTGGGAGGAGTaGCTGGGCTACTCGCCAGTCGCCTCAGGTATTGAG | + |
Preference number: 3 (lower is better) Translates to: TGSLLAPPVWEE*LGYSPVASGIE Trigger: CTCAATACCTGAGGCGACTGGCGAGTAGCCCAGTCACTCCTCCCACACCGGTGGCGCCAGCAGCGAACCTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
||
3UTR GCA 72 bp | CATAGGAGAGAGCGGTGGGGCAGCGAGAGCAGGGGCTaGTGGGTGGTAGTGTGTCGCACAGGTTCCCTAGGT | + |
Preference number: 3 (lower is better) Translates to: HRRERWGSESRG*WVVVCRTGSLG Trigger: ACCTAGGGAACCTGTGCGACACACTACCACCCAGCAGCCCCTGCTCTCGCTGCCCCACCGCTCTCTCCTATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR CCA 72 bp | GCTGATGTGCTCAGCAGCCTTGCCCCTCCGACGGTGTaGCCTTGGTGGACAAGTGCCCATAGGAGAGAGCGG | + |
Preference number: 3 (lower is better) Translates to: ADVLSSLAPPTV*PWWTSAHRRER Trigger: CCGCTCTCTCCTATGGGCACTTGTCCACCAAGGCCACACCGTCGGAGGGGCAAGGCTGCTGAGCACATCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR-3UTR CAA 90 bp | GCCATGGAAAGGATCTGTCCCGTCGTCGCCCACAGGTGGGGGCGAGCCACTGGGTCGGCAACAGTTTCATaGTGCAGTGAGGTCCAGGCA | + |
Preference number: 3 (lower is better) Translates to: AMERICPVVAHRWGRATGSATVS*CSEVQA Trigger: TGCCTGGACCTCACTGCACAATGAAACTGTTGCCGA...CCCAGTGGCTCGCCCCCACCTGTGGGCGACGACGGGACAGATCCTTTCCATGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR GCA 72 bp | GGGCTCCTTGGTTGGTGTCACATCAGAAGGCTGATGTaGTCAGCAGCCTTGCCCCTCCGACGGTGTGGCCTT | + |
Preference number: 3 (lower is better) Translates to: GLLGWCHIRRLM*SAALPLRRCGL Trigger: AAGGCCACACCGTCGGAGGGGCAAGGCTGCTGAGCACATCAGCCTTCTGATGTGACACCAACCAAGGAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
||
3UTR TCA 72 bp | TCCTCATCCCGCCCCGCGCTCTCCTGCAGGGTTAGCTaGTGTCCTGGTTTCTTCCGGTTGAGCTCTGTAGCT | + |
Preference number: 3 (lower is better) Translates to: SSSRPALSCRVS*CPGFFRLSSVA Trigger: AGCTACAGAGCTCAACCGGAAGAAACCAGGACATCAGCTAACCCTGCAGGAGAGCGCGGGGCGGGATGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR TCA 72 bp | CCTCTCGAAAGATGCAACTGCCCAACAGGTGCAGGGTaGAGGGAAGACAGGGCTCTCCCCAATCCCCTGGCT | + |
Preference number: 3 (lower is better) Translates to: PLERCNCPTGAG*REDRALPNPLA Trigger: AGCCAGGGGATTGGGGAGAGCCCTGTCTTCCCTTCACCCTGCACCTGTTGGGCAGTTGCATCTTTCGAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR CCA 72 bp | CAGGGTGAAGGGAAGACAGGGCTCTCCCCAATCCCCTaGCTCGTGGTATATCCCAAGGCCCAGCTCATGACA | + |
Preference number: 3 (lower is better) Translates to: QGEGKTGLSPIP*LVVYPKAQLMT Trigger: TGTCATGAGCTGGGCCTTGGGATATACCACGAGCCAGGGGATTGGGGAGAGCCCTGTCTTCCCTTCACCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR TCA 72 bp | GGAGTGACTGGGCTACTCGCCAGTCGCCTCAGGTATTaGGGGCTCCAGCAAGTGGGAAGACTTGGCCTTAAC | + |
Preference number: 3 (lower is better) Translates to: GVTGLLASRLRY*GLQQVGRLGLN Trigger: GTTAAGGCCAAGTCTTCCCACTTGCTGGAGCCCTCAATACCTGAGGCGACTGGCGAGTAGCCCAGTCACTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR TCA 72 bp | GTGTGCGTGTGCGTGTGCGCGTGCGTGCTTGCGTGGTaGTGTGGGAAGGGGTATATGAAGGCAGGGAGAAAA | + |
Preference number: 3 (lower is better) Translates to: VCVCVCACVLAW*CGKGYMKAGRK Trigger: TTTTCTCCCTGCCTTCATATACCCCTTCCCACATCACCACGCAAGCACGCACGCGCACACGCACACGCACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR GCA 72 bp | ATAAGGTGTGTGCGTGTGCGTGTGCGCGTGCGTGCTTaGGTGGTGATGTGGGAAGGGGTATATGAAGGCAGG | + |
Preference number: 3 (lower is better) Translates to: IRCVRVRVRVRA*VVMWEGVYEGR Trigger: CCTGCCTTCATATACCCCTTCCCACATCACCACGCAAGCACGCACGCGCACACGCACACGCACACACCTTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR GCA 72 bp | CAGGGATCCTCTCGAAAGATGCAACTGCCCAACAGGTaGAGGGTGAAGGGAAGACAGGGCTCTCCCCAATCC | + |
Preference number: 3 (lower is better) Translates to: QGSSRKMQLPNR*RVKGRQGSPQS Trigger: GGATTGGGGAGAGCCCTGTCTTCCCTTCACCCTGCACCTGTTGGGCAGTTGCATCTTTCGAGAGGATCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR CCA 72 bp | AGTCCCCAGCTCAGAGAAGAATGGATGGCTGTGTACTaGGAGGAGGAGGGGCTTGCTCTCCCAAGCACCATG | + |
Preference number: 3 (lower is better) Translates to: SPQLREEWMAVY*EEEGLALPSTM Trigger: CATGGTGCTTGGGAGAGCAAGCCCCTCCTCCTCCCAGTACACAGCCATCCATTCTTCTCTGAGCTGGGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR-3UTR CAA 90 bp | GTGAAGGGAAGACAGGGCTCTCCCCAATCCCCTGGCTCGTGGTATATCCCAAGGCCTGGTTTCTTCCGGTaGAGCTCTGTAGCTTTCCCT | + |
Preference number: 3 (lower is better) Translates to: VKGRQGSPQSPGSWYIPRPGFFR*SSVAFP Trigger: AGGGAAAGCTACAGAGCTCAACCGGAAGAAACCAGG...CCTTGGGATATACCACGAGCCAGGGGATTGGGGAGAGCCCTGTCTTCCCTTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR GCA 72 bp | CTCTGGCCTTCCTCCCATCCCAGTCTAGCAAAATCTTaGTGTCCAGAGGGCTGGGCTCCTTGGTTGGTGTCA | + |
Preference number: 3 (lower is better) Translates to: LWPSSHPSLAKS*CPEGWAPWLVS Trigger: TGACACCAACCAAGGAGCCCAGCCCTCTGGACAGCAAGATTTTGCTAGACTGGGATGGGAGGAAGGCCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR GCA 72 bp | ACACAGACCAAGACACAAATAGCTCCCGGCCCACGCTaGTTCCAGTGTGCTGACGATGGCTGTTTGCTCCTG | + |
Preference number: 3 (lower is better) Translates to: TQTKTQIAPGPR*FQCADDGCLLL Trigger: CAGGAGCAAACAGCCATCGTCAGCACACTGGAAGCAGCGTGGGCCGGGAGCTATTTGTGTCTTGGTCTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR TCA 72 bp | CAGCACAGTCGCCCACACAGAGTACACTTCTCACTGTaGAGTCCCCAGCTCAGAGAAGAATGGATGGCTGTG | + |
Preference number: 3 (lower is better) Translates to: QHSRPHRVHFSL*SPQLREEWMAV Trigger: CACAGCCATCCATTCTTCTCTGAGCTGGGGACTTCACAGTGAGAAGTGTACTCTGTGTGGGCGACTGTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR CCA 72 bp | CTCGAGAGAACAATGGCAAAATGGCAGCCTAGGCCTTaGCTCTCACAGTTCGAGAGAACCAGGGATCCTCTC | + |
Preference number: 3 (lower is better) Translates to: LERTMAKWQPRP*LSQFERTRDPL Trigger: GAGAGGATCCCTGGTTCTCTCGAACTGTGAGAGCCAAGGCCTAGGCTGCCATTTTGCCATTGTTCTCTCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR-3UTR CAA 90 bp | GGCACAGACATCACACTTTGGGCAGCACAGTCGCCCACACAGAGTACACTTCTCGCTGACGATGGCTGTTaGCTCCTGTTTCTTCTCCTT | + |
Preference number: 3 (lower is better) Translates to: GTDITLWAAQSPTQSTLLADDGC*LLFLLL Trigger: AAGGAGAAGAAACAGGAGCAAACAGCCATCGTCAGC...GAGAAGTGTACTCTGTGTGGGCGACTGTGCTGCCCAAAGTGTGATGTCTGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR TCA 72 bp | ACAAATAGCTCCCGGCCCACGCTGCTTCCAGTGTGCTaGCGATGGCTGTTTGCTCCTGTTTCTTCTCCTTTT | + |
Preference number: 3 (lower is better) Translates to: TNSSRPTLLPVC*RWLFAPVSSPF Trigger: AAAAGGAGAAGAAACAGGAGCAAACAGCCATCGTCAGCACACTGGAAGCAGCGTGGGCCGGGAGCTATTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR CCA 72 bp | TCGCCAGTCGCCTCAGGTATTGAGGGCTCCAGCAAGTaGGAAGACTTGGCCTTAACAATCATCCTGATTCTA | + |
Preference number: 3 (lower is better) Translates to: SPVASGIEGSSK*EDLALTIILIL Trigger: TAGAATCAGGATGATTGTTAAGGCCAAGTCTTCCCACTTGCTGGAGCCCTCAATACCTGAGGCGACTGGCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR-3UTR CAA 90 bp | GGGAGAAAACTAATGTTGAGACTGAGACCAGGAGAGCAAACAATAGAATCTCGGGGCTGGGCTCCTTGGTaGGTGTCACATCAGAAGGCT | + |
Preference number: 3 (lower is better) Translates to: GRKLMLRLRPGEQTIESRGWAPW*VSHQKA Trigger: AGCCTTCTGATGTGACACCAACCAAGGAGCCCAGCC...CCGAGATTCTATTGTTTGCTCTCCTGGTCTCAGTCTCAACATTAGTTTTCTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR CCA 72 bp | CAAGTTTCTCACACACTAACATTCTTAATGGGAAGGTaGGGGCACTTCCTTCCTCTGAGGGTTTTGGAGGAC | + |
Preference number: 3 (lower is better) Translates to: QVSHTLTFLMGR*GHFLPLRVLED Trigger: GTCCTCCAAAACCCTCAGAGGAAGGAAGTGCCCCCACCTTCCCATTAAGAATGTTAGTGTGTGAGAAACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR-3UTR CAA 90 bp | CAAGGCCCAGCTCATGACAGGAAGTTATTTTGGGTTAGCTCCTACTTCTTCAGAAGCAAGTGGGAAGACTaGGCCTTAACAATCATCCTG | + |
Preference number: 3 (lower is better) Translates to: QGPAHDRKLFWVSSYFFRSKWED*ALTIIL Trigger: CAGGATGATTGTTAAGGCCAAGTCTTCCCACTTGCT...TCTGAAGAAGTAGGAGCTAACCCAAAATAACTTCCTGTCATGAGCTGGGCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR CCA 72 bp | AAACTTTTTCTGGTTCTCGAGAGAACAATGGCAAAATaGCAGCCTAGGCCTTGGCTCTCACAGTTCGAGAGA | + |
Preference number: 3 (lower is better) Translates to: KLFLVLERTMAK*QPRPWLSQFER Trigger: TCTCTCGAACTGTGAGAGCCAAGGCCTAGGCTGCCATTTTGCCATTGTTCTCTCGAGAACCAGAAAAAGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR CCA 72 bp | GCCTTAACAATCATCCTGATTCTAGAAATTTCTCTTTaGGTTAGAATCGCACCTCGGAGGCTTGTGTGTGTG | + |
Preference number: 3 (lower is better) Translates to: ALTIILILEISL*VRIAPRRLVCV Trigger: CACACACACAAGCCTCCGAGGTGCGATTCTAACCCAAAGAGAAATTTCTAGAATCAGGATGATTGTTAAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR CCA 72 bp | ATATCCCAAGGCCCAGCTCATGACAGGAAGTTATTTTaGGTTAGCTCCTACTTCTTCAGACAAGCAGATATG | + |
Preference number: 3 (lower is better) Translates to: ISQGPAHDRKLF*VSSYFFRQADM Trigger: CATATCTGCTTGTCTGAAGAAGTAGGAGCTAACCCAAAATAACTTCCTGTCATGAGCTGGGCCTTGGGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR CCA 72 bp | AGAAACCAATGTCTTTCTTTAGCACAAACACAGCAGTaGCCCATGGCAATCAGACGTCATTTACACAACGCT | + |
Preference number: 3 (lower is better) Translates to: RNQCLSLAQTQQ*PMAIRRHLHNA Trigger: AGCGTTGTGTAAATGACGTCTGATTGCCATGGGCCACTGCTGTGTTTGTGCTAAAGAAAGACATTGGTTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR TCA 90 bp | GGTGGGAGGCACAGGTTCGCTGCTGGCGCCACCGGTGTGGGAGGAGTGACTGGGAGACAGTCGTGTGCTTaGCGAAAGCCACGTCCCCTG | + |
Preference number: 4 (lower is better) Translates to: GGRHRFAAGATGVGGVTGRQSCA*RKPRPL Trigger: CAGGGGACGTGGCTTTCGTCAAGCACACGACTGTCT...CCCAGTCACTCCTCCCACACCGGTGGCGCCAGCAGCGAACCTGTGCCTCCCACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR GCA 90 bp | CAGGTTCGCTGCTGGCGCCACCGGTGTGGGAGGAGTGACTGGGCTACTCGCCAGATCTGCTCCATGCAGTaGTCAGGGGACTCGGCCGAC | + |
Preference number: 4 (lower is better) Translates to: QVRCWRHRCGRSDWATRQICSMQ*SGDSAD Trigger: GTCGGCCGAGTCCCCTGAGCACTGCATGGAGCAGAT...CTGGCGAGTAGCCCAGTCACTCCTCCCACACCGGTGGCGCCAGCAGCGAACCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR TCA 90 bp | CAGGTTCGCTGCTGGCGCCACCGGTGTGGGAGGAGTGACTGGGCTACTCGCCAGTCTTGCCACCTGAGGTaGGAAGCCCAAGGCTCAGGA | + |
Preference number: 4 (lower is better) Translates to: QVRCWRHRCGRSDWATRQSCHLR*EAQGSG Trigger: TCCTGAGCCTTGGGCTTCTCACCTCAGGTGGCAAGA...CTGGCGAGTAGCCCAGTCACTCCTCCCACACCGGTGGCGCCAGCAGCGAACCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR GCA 90 bp | CAGGTTCGCTGCTGGCGCCACCGGTGTGGGAGGAGTGACTGGGCTACTCGCCAGCTGACATCAGGGACTTaGCCCAGGAAGGCAGGGTGT | + |
Preference number: 4 (lower is better) Translates to: QVRCWRHRCGRSDWATRQLTSGT*PRKAGC Trigger: ACACCCTGCCTTCCTGGGGCAAGTCCCTGATGTCAG...CTGGCGAGTAGCCCAGTCACTCCTCCCACACCGGTGGCGCCAGCAGCGAACCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR CCA 90 bp | GCCATGGAAAGGATCTGTCCCGTCGTCGCCCACAGGTGGGGGCGAGCCACTGGGCGGTTAATGCCTGTGTaGCAGGACTTGACGCCCTTC | + |
Preference number: 4 (lower is better) Translates to: AMERICPVVAHRWGRATGRLMPV*QDLTPF Trigger: GAAGGGCGTCAAGTCCTGCCACACAGGCATTAACCG...CCCAGTGGCTCGCCCCCACCTGTGGGCGACGACGGGACAGATCCTTTCCATGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR CCA 90 bp | CAGGTTCGCTGCTGGCGCCACCGGTGTGGGAGGAGTGACTGGGCTACTCGCCAGCAGCCCGTGCCCCATTaGGGCACAGTAGTTCATAGT | + |
Preference number: 4 (lower is better) Translates to: QVRCWRHRCGRSDWATRQQPVPH*GTVVHS Trigger: ACTATGAACTACTGTGCCCCAATGGGGCACGGGCTG...CTGGCGAGTAGCCCAGTCACTCCTCCCACACCGGTGGCGCCAGCAGCGAACCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR TCA 90 bp | GTGTGCTCCTTCCTTGGCATCTCACCAGGTGGCCGGTACAGAGGCTGGAAGCTGGCACCGGAGCACTGCTaGGACAACATCCCCTCCAGC | + |
Preference number: 4 (lower is better) Translates to: VCSFLGISPGGRYRGWKLAPEHC*DNIPSS Trigger: GCTGGAGGGGATGTTGTCTCAGCAGTGCTCCGGTGC...CAGCTTCCAGCCTCTGTACCGGCCACCTGGTGAGATGCCAAGGAAGGAGCACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR CCA 90 bp | CAGGTTCGCTGCTGGCGCCACCGGTGTGGGAGGAGTGACTGGGCTACTCGCCAGCTGGCATTGAAGAACTaGCTCACCGCTGTGAGGACA | + |
Preference number: 4 (lower is better) Translates to: QVRCWRHRCGRSDWATRQLALKN*LTAVRT Trigger: TGTCCTCACAGCGGTGAGCCAGTTCTTCAATGCCAG...CTGGCGAGTAGCCCAGTCACTCCTCCCACACCGGTGGCGCCAGCAGCGAACCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR CCA 90 bp | CAGGTTCGCTGCTGGCGCCACCGGTGTGGGAGGAGTGACTGGGCTACTCGCCAGCATGACAGCGTGGGATaGCATTTGTGCCAGGTTGCA | + |
Preference number: 4 (lower is better) Translates to: QVRCWRHRCGRSDWATRQHDSVG*HLCQVA Trigger: TGCAACCTGGCACAAATGCCATCCCACGCTGTCATG...CTGGCGAGTAGCCCAGTCACTCCTCCCACACCGGTGGCGCCAGCAGCGAACCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR CCA 90 bp | CAGGTTCGCTGCTGGCGCCACCGGTGTGGGAGGAGTGACTGGGCTACTCGCCAGTCTCCAAACAGGTCCTaGGCCTTGTCCAGAAGTCCA | + |
Preference number: 4 (lower is better) Translates to: QVRCWRHRCGRSDWATRQSPNRS*ALSRSP Trigger: TGGACTTCTGGACAAGGCCCAGGACCTGTTTGGAGA...CTGGCGAGTAGCCCAGTCACTCCTCCCACACCGGTGGCGCCAGCAGCGAACCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR TCA 90 bp | GCCATGGAAAGGATCTGTCCCGTCGTCGCCCACAGGTGGGGGCGAGCCACTGGGCATTGGAATTCCTCCTaGCCACAGCCACGGCATAAT | + |
Preference number: 4 (lower is better) Translates to: AMERICPVVAHRWGRATGHWNSS*PQPRHN Trigger: ATTATGCCGTGGCTGTGGTCAGGAGGAATTCCAATG...CCCAGTGGCTCGCCCCCACCTGTGGGCGACGACGGGACAGATCCTTTCCATGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR GCA 90 bp | GTGTGCTCCTTCCTTGGCATCTCACCAGGTGGCCGGTACAGAGGCTGGAAGCTGGTCACAGCGTCAGTGTaGCCAGCCTGGATCTGCTCC | + |
Preference number: 4 (lower is better) Translates to: VCSFLGISPGGRYRGWKLVTASV*PAWICS Trigger: GGAGCAGATCCAGGCTGGGCACACTGACGCTGTGAC...CAGCTTCCAGCCTCTGTACCGGCCACCTGGTGAGATGCCAAGGAAGGAGCACAC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR CAA 72 bp | CGCACAGGTTCCCTAGGTTGGTGGTGTGCTCCTTCCTaGGCATCTCACCAGGTGGCCGGTACAGAGGCTGGA | + |
Preference number: 4 (lower is better) Translates to: RTGSLGWWCAPS*ASHQVAGTEAG Trigger: TCCAGCCTCTGTACCGGCCACCTGGTGAGATGCCAAGGAAGGAGCACACCACCAACCTAGGGAACCTGTGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR CCA 90 bp | GTCGTCGCCCACAGGTGGGGGCGAGCCACTGGGAACCTGGCCTGTCATTGGGATAAGCTGCTGTCTTCATaGCTGAACAGAAGCTGGCCT | + |
Preference number: 4 (lower is better) Translates to: VVAHRWGRATGNLACHWDKLLSS*LNRSWP Trigger: AGGCCAGCTTCTGTTCAGCCATGAAGACAGCAGCTT...ATCCCAATGACAGGCCAGGTTCCCAGTGGCTCGCCCCCACCTGTGGGCGACGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR GCA 90 bp | GCCATGGAAAGGATCTGTCCCGTCGTCGCCCACAGGTGGGGGCGAGCCACTGGGTTCCAGGGACACAGCTaGCTCCAAAATAATCACCAA | + |
Preference number: 4 (lower is better) Translates to: AMERICPVVAHRWGRATGFQGHS*LQNNHQ Trigger: TTGGTGATTATTTTGGAGGCAGCTGTGTCCCTGGAA...CCCAGTGGCTCGCCCCCACCTGTGGGCGACGACGGGACAGATCCTTTCCATGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR CCA 90 bp | GTGTACTGGGAGGAGGAGGGGCTTGCTCTCCCAAGCACCATGGTGACCGATTTTGACTTCCCCCACCACTaGCTTCAGGCCGTGCTCCTT | + |
Preference number: 4 (lower is better) Translates to: VYWEEEGLALPSTMVTDFDFPHH*LQAVLL Trigger: AAGGAGCACGGCCTGAAGCCAGTGGTGGGGGAAGTC...AAAATCGGTCACCATGGTGCTTGGGAGAGCAAGCCCCTCCTCCTCCCAGTACAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR CCA 90 bp | TGGTGTGCTCCTTCCTTGGCATCTCACCAGGTGGCCGGTACAGAGGCTGGAAGCATATCTCCACACTTCTaGATCTCGGGCGCTGACAGC | + |
Preference number: 4 (lower is better) Translates to: WCAPSLASHQVAGTEAGSISPHF*ISGADS Trigger: GCTGTCAGCGCCCGAGATCCAGAAGTGTGGAGATAT...GCTTCCAGCCTCTGTACCGGCCACCTGGTGAGATGCCAAGGAAGGAGCACACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR CCA 90 bp | GGTGGGAGGCACAGGTTCGCTGCTGGCGCCACCGGTGTGGGAGGAGTGACTGGGCTTGGCTGTGATATTTaGAGGAGTCAAACATTTGGA | + |
Preference number: 4 (lower is better) Translates to: GGRHRFAAGATGVGGVTGLGCDI*RSQTFG Trigger: TCCAAATGTTTGACTCCTCCAAATATCACAGCCAAG...CCCAGTCACTCCTCCCACACCGGTGGCGCCAGCAGCGAACCTGTGCCTCCCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR CAA 72 bp | GCTCTGGCCTTCCTCCCATCCCAGTCTAGCAAAATCTaGCTGTCCAGAGGGCTGGGCTCCTTGGTTGGTGTC | + |
Preference number: 4 (lower is better) Translates to: ALAFLPSQSSKI*LSRGLGSLVGV Trigger: GACACCAACCAAGGAGCCCAGCCCTCTGGACAGCAAGATTTTGCTAGACTGGGATGGGAGGAAGGCCAGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR TCA 90 bp | GATTTTCCTCAGGATTGTGTGACTCTGGCTGGGACACTGCCAGGACCTTCTCTACTGACCACCACAGCATaGGCAGGCACCTTGGCCAGG | + |
Preference number: 4 (lower is better) Translates to: DFPQDCVTLAGTLPGPSLLTTTA*AGTLAR Trigger: CCTGGCCAAGGTGCCTGCTCATGCTGTGGTGGTCAG...TAGAGAAGGTCCTGGCAGTGTCCCAGCCAGAGTCACACAATCCTGAGGAAAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR TCA 90 bp | GACATCACACTTTGGGCAGCACAGTCGCCCACACAGAGTACACTTCTCACTGTGGCACGCAGCTGGCATTaGAGAACTGGCTCACCGCTG | + |
Preference number: 4 (lower is better) Translates to: DITLWAAQSPTQSTLLTVARSWH*RTGSPL Trigger: CAGCGGTGAGCCAGTTCTTCAATGCCAGCTGCGTGC...CACAGTGAGAAGTGTACTCTGTGTGGGCGACTGTGCTGCCCAAAGTGTGATGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR GCA 90 bp | CCACGGGAGCCGTTAAACAGGATAGTTTCCACCCTGCATCAAGTTTCTCACACAGCGAGGAAGGAGGCCTaGAGCCAGGGTCAGCAGGAG | + |
Preference number: 4 (lower is better) Translates to: PREPLNRIVSTLHQVSHTARKEA*SQGQQE Trigger: CTCCTGCTGACCCTGGCTGCAGGCCTCCTTCCTCGC...TGTGTGAGAAACTTGATGCAGGGTGGAAACTATCCTGTTTAACGGCTCCCGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR CCA 90 bp | GGGGCTTGCTCTCCCAAGCACCATGGTGACCGATTTTCCTCAGGATTGTGTGACATGAGCTGGACACAGTaGTCAGCGGAGTTGCCCTGG | + |
Preference number: 4 (lower is better) Translates to: GACSPKHHGDRFSSGLCDMSWTQ*SAELPW Trigger: CCAGGGCAACTCCGCTGACCACTGTGTCCAGCTCAT...GTCACACAATCCTGAGGAAAATCGGTCACCATGGTGCTTGGGAGAGCAAGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR CAA 72 bp | ATGGGAAGGTGGGGGCACTTCCTTCCTCTGAGGGTTTaGGAGGACTTCATCCCCACAGTACAGCTCTGGCCT | + |
Preference number: 4 (lower is better) Translates to: MGRWGHFLPLRV*EDFIPTVQLWP Trigger: AGGCCAGAGCTGTACTGTGGGGATGAAGTCCTCCAAAACCCTCAGAGGAAGGAAGTGCCCCCACCTTCCCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR TCA 90 bp | GACATCACACTTTGGGCAGCACAGTCGCCCACACAGAGTACACTTCTCACTGTGCATCCATGTCACCCCTaGCCACCACAGCATGAGCAG | + |
Preference number: 4 (lower is better) Translates to: DITLWAAQSPTQSTLLTVHPCHP*PPQHEQ Trigger: CTGCTCATGCTGTGGTGGTCAGGGGTGACATGGATG...CACAGTGAGAAGTGTACTCTGTGTGGGCGACTGTGCTGCCCAAAGTGTGATGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR GCA 90 bp | CTCTGGCCTTCCTCCCATCCCAGTCTAGCAAAATCTTGCTGTCCAGAGGGCTGGCCTCGCTCATGTCTTTaGACTTCTGCTGCTCTGCGT | + |
Preference number: 4 (lower is better) Translates to: LWPSSHPSLAKSCCPEGWPRSCL*TSAALR Trigger: ACGCAGAGCAGCAGAAGTGCAAAGACATGAGCGAGG...CCAGCCCTCTGGACAGCAAGATTTTGCTAGACTGGGATGGGAGGAAGGCCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR GCA 90 bp | GGCACAGACATCACACTTTGGGCAGCACAGTCGCCCACACAGAGTACACTTCTCTCCAGCACTGTGCTGTaGTTCACGAAGGCCACGTCA | + |
Preference number: 4 (lower is better) Translates to: GTDITLWAAQSPTQSTLLSSTVL*FTKATS Trigger: TGACGTGGCCTTCGTGAAGCACAGCACAGTGCTGGA...GAGAAGTGTACTCTGTGTGGGCGACTGTGCTGCCCAAAGTGTGATGTCTGTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR CCA 90 bp | GACATCACACTTTGGGCAGCACAGTCGCCCACACAGAGTACACTTCTCACTGTGAGAGGAGCCCCTTCATaGCCTGCAGGTATTCCTGGC | + |
Preference number: 4 (lower is better) Translates to: DITLWAAQSPTQSTLLTVRGAPS*PAGIPG Trigger: GCCAGGAATACCTGCAGGCCATGAAGGGGCTCCTCT...CACAGTGAGAAGTGTACTCTGTGTGGGCGACTGTGCTGCCCAAAGTGTGATGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR CAA 72 bp | GCAAAATCTTGCTGTCCAGAGGGCTGGGCTCCTTGGTaGGTGTCACATCAGAAGGCTGATGTGCTCAGCAGC | + |
Preference number: 4 (lower is better) Translates to: AKSCCPEGWAPW*VSHQKADVLSS Trigger: GCTGCTGAGCACATCAGCCTTCTGATGTGACACCAACCAAGGAGCCCAGCCCTCTGGACAGCAAGATTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR TCA 90 bp | CCACGGGAGCCGTTAAACAGGATAGTTTCCACCCTGCATCAAGTTTCTCACACAGAAGCTCGTCCAGGGTaGAGGAGTAGGAGCTGTCCC | + |
Preference number: 4 (lower is better) Translates to: PREPLNRIVSTLHQVSHTEARPG*RSRSCP Trigger: GGGACAGCTCCTACTCCTTCACCCTGGACGAGCTTC...TGTGTGAGAAACTTGATGCAGGGTGGAAACTATCCTGTTTAACGGCTCCCGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR GCA 90 bp | TTTCTGGTTCTCGAGAGAACAATGGCAAAATGGCAGCCTAGGCCTTGGCTCTCATGCCCAGCCTGGATCTaGTCCATGCAGTGCTCAGGG | + |
Preference number: 4 (lower is better) Translates to: FLVLERTMAKWQPRPWLSCPAWI*SMQCSG Trigger: CCCTGAGCACTGCATGGAGCAGATCCAGGCTGGGCA...TGAGAGCCAAGGCCTAGGCTGCCATTTTGCCATTGTTCTCTCGAGAACCAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR CCA 90 bp | CTCTGGCCTTCCTCCCATCCCAGTCTAGCAAAATCTTGCTGTCCAGAGGGCTGGCCTTCGTTGAGCAGTTaGAATATGAGACCGCCATCC | + |
Preference number: 4 (lower is better) Translates to: LWPSSHPSLAKSCCPEGWPSLSS*NMRPPS Trigger: GGATGGCGGTCTCATATTCCAACTGCTCAACGAAGG...CCAGCCCTCTGGACAGCAAGATTTTGCTAGACTGGGATGGGAGGAAGGCCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR CCA 90 bp | CTTCCTTCCTCTGAGGGTTTTGGAGGACTTCATCCCCACAGTACAGCTCTGGCCAGTTCTGTGTGGCAATaGGCACAAGCTCCAAGGTGG | + |
Preference number: 4 (lower is better) Translates to: LPSSEGFGGLHPHSTALASSVWQ*AQAPRW Trigger: CCACCTTGGAGCTTGTGCCCATTGCCACACAGAACT...GGCCAGAGCTGTACTGTGGGGATGAAGTCCTCCAAAACCCTCAGAGGAAGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR CCA 90 bp | AAGACACAAATAGCTCCCGGCCCACGCTGCTTCCAGTGTGCTGACGATGGCTGTCCTCATAGTTCTGTGTaGCAATGGGCACAAGCTCCA | + |
Preference number: 4 (lower is better) Translates to: KTQIAPGPRCFQCADDGCPHSSV*QWAQAP Trigger: TGGAGCTTGTGCCCATTGCCACACAGAACTATGAGG...ACAGCCATCGTCAGCACACTGGAAGCAGCGTGGGCCGGGAGCTATTTGTGTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR CAA 72 bp | TCACACCTGAAAGGCACACGGCACAGACATCACACTTaGGGCAGCACAGTCGCCCACACAGAGTACACTTCT | + |
Preference number: 4 (lower is better) Translates to: SHLKGTRHRHHT*GSTVAHTEYTS Trigger: AGAAGTGTACTCTGTGTGGGCGACTGTGCTGCCCAAAGTGTGATGTCTGTGCCGTGTGCCTTTCAGGTGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR TCA 90 bp | GGGGCTTGCTCTCCCAAGCACCATGGTGACCGATTTTCCTCAGGATTGTGTGACCCAAGGTGGAGTCTTTaGACAGCAAGTTCTTCTGGC | + |
Preference number: 4 (lower is better) Translates to: GACSPKHHGDRFSSGLCDPRWSL*TASSSG Trigger: GCCAGAAGAACTTGCTGTTCAAAGACTCCACCTTGG...GTCACACAATCCTGAGGAAAATCGGTCACCATGGTGCTTGGGAGAGCAAGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR GCA 90 bp | ACCAAGACACAAATAGCTCCCGGCCCACGCTGCTTCCAGTGTGCTGACGATGGCCAGGGTGATGGCATCTaGTTTTTGTTCCTTGATGAG | + |
Preference number: 4 (lower is better) Translates to: TKTQIAPGPRCFQCADDGQGDGI*FLFLDE Trigger: CTCATCAAGGAACAAAAAGCAGATGCCATCACCCTG...GCCATCGTCAGCACACTGGAAGCAGCGTGGGCCGGGAGCTATTTGTGTCTTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR CCA 90 bp | CTAATGTTGAGACTGAGACCAGGAGAGCAAACAATAGAATCTCGGCAACAGTTTCACCTCCCAGCCCGCTaGGCTGCCCAAGTAGGGGTG | + |
Preference number: 4 (lower is better) Translates to: LMLRLRPGEQTIESRQQFHLPAR*AAQVGV Trigger: CACCCCTACTTGGGCAGCCCAGCGGGCTGGGAGGTG...AAACTGTTGCCGAGATTCTATTGTTTGCTCTCCTGGTCTCAGTCTCAACATTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR CCA 90 bp | GACATCACACTTTGGGCAGCACAGTCGCCCACACAGAGTACACTTCTCACTGTGGAAGATGTTGGTGTCTaGACGGACCATGACAGCGTG | + |
Preference number: 4 (lower is better) Translates to: DITLWAAQSPTQSTLLTVEDVGV*TDHDSV Trigger: CACGCTGTCATGGTCCGTCCAGACACCAACATCTTC...CACAGTGAGAAGTGTACTCTGTGTGGGCGACTGTGCTGCCCAAAGTGTGATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR TCA 90 bp | CTCTGGCCTTCCTCCCATCCCAGTCTAGCAAAATCTTGCTGTCCAGAGGGCTGGCAAGGCTCAGGATTGTaGCCATTTGTGTTCTCAAAG | + |
Preference number: 4 (lower is better) Translates to: LWPSSHPSLAKSCCPEGWQGSGL*PFVFSK Trigger: CTTTGAGAACACAAATGGTCACAATCCTGAGCCTTG...CCAGCCCTCTGGACAGCAAGATTTTGCTAGACTGGGATGGGAGGAAGGCCAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR GCA 90 bp | GGGAGAAAACTAATGTTGAGACTGAGACCAGGAGAGCAAACAATAGAATCTCGGGCCGTGCTCCTTCCCTaGCTCATAGATGGCCCCTCC | + |
Preference number: 4 (lower is better) Translates to: GRKLMLRLRPGEQTIESRAVLLP*LIDGPS Trigger: GGAGGGGCCATCTATGAGGCAGGGAAGGAGCACGGC...CCGAGATTCTATTGTTTGCTCTCCTGGTCTCAGTCTCAACATTAGTTTTCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR GCA 90 bp | GATTTTCCTCAGGATTGTGTGACTCTGGCTGGGACACTGCCAGGACCTTCTCTAGGAGCTGTCCCTTCTTaGCACAGCCACCACAAAGTA | + |
Preference number: 4 (lower is better) Translates to: DFPQDCVTLAGTLPGPSLGAVPS*HSHHKV Trigger: TACTTTGTGGTGGCTGTGGCAAGAAGGGACAGCTCC...TAGAGAAGGTCCTGGCAGTGTCCCAGCCAGAGTCACACAATCCTGAGGAAAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR TCA 90 bp | CCTACTTCTTCAGACAAGCAGATATGTTCAGATATGTTCACACGGATAAGGTGTGCTCCACAAGGCACCTaGAGGCCCCGCTGTAGCCGT | + |
Preference number: 4 (lower is better) Translates to: PTSSDKQICSDMFTRIRCAPQGT*RPRCSR Trigger: ACGGCTACAGCGGGGCCTTCAGGTGCCTTGTGGAGC...ACACCTTATCCGTGTGAACATATCTGAACATATCTGCTTGTCTGAAGAAGTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR GCA 90 bp | AGACATCACACTTTGGGCAGCACAGTCGCCCACACAGAGTACACTTCTCACTGTATGTCTTTGCACTTCTaGTGCTCTGCGTCTGAGATG | + |
Preference number: 4 (lower is better) Translates to: RHHTLGSTVAHTEYTSHCMSLHF*CSASEM Trigger: CATCTCAGACGCAGAGCAGCAGAAGTGCAAAGACAT...ACAGTGAGAAGTGTACTCTGTGTGGGCGACTGTGCTGCCCAAAGTGTGATGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR TCA 90 bp | CAAGGCCCAGCTCATGACAGGAAGTTATTTTGGGTTAGCTCCTACTTCTTCAGATGCTGTCTTCATGGCTaGACAGAAGCTGGCCTTCGT | + |
Preference number: 4 (lower is better) Translates to: QGPAHDRKLFWVSSYFFRCCLHG*TEAGLR Trigger: ACGAAGGCCAGCTTCTGTTCAGCCATGAAGACAGCA...TCTGAAGAAGTAGGAGCTAACCCAAAATAACTTCCTGTCATGAGCTGGGCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR GCA 90 bp | TTTCTGGTTCTCGAGAGAACAATGGCAAAATGGCAGCCTAGGCCTTGGCTCTCAGCATTTGTGCCAGGTTaGAAGCTTGGAACTGGTCTA | + |
Preference number: 4 (lower is better) Translates to: FLVLERTMAKWQPRPWLSAFVPG*KLGTGL Trigger: TAGACCAGTTCCAAGCTTGCAACCTGGCACAAATGC...TGAGAGCCAAGGCCTAGGCTGCCATTTTGCCATTGTTCTCTCGAGAACCAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR TCA 90 bp | GGGGTATATGAAGGCAGGGAGAAAACTAATGTTGAGACTGAGACCAGGAGAGCAAGCAGGTCTTGGCTGTaGTATTTGGAGGAGTCAAAC | + |
Preference number: 4 (lower is better) Translates to: GVYEGREKTNVETETRRASRSWL*YLEESN Trigger: GTTTGACTCCTCCAAATATCACAGCCAAGACCTGCT...TGCTCTCCTGGTCTCAGTCTCAACATTAGTTTTCTCCCTGCCTTCATATACCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR CCA 90 bp | CCTACTTCTTCAGACAAGCAGATATGTTCAGATATGTTCACACGGATAAGGTGTCGAATGCCAGCTCCCTaGAAGGCCTCGCTCATGTCT | + |
Preference number: 4 (lower is better) Translates to: PTSSDKQICSDMFTRIRCRMPAP*KASLMS Trigger: AGACATGAGCGAGGCCTTCCAGGGAGCTGGCATTCG...ACACCTTATCCGTGTGAACATATCTGAACATATCTGCTTGTCTGAAGAAGTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR CCA 90 bp | TTTCTGGTTCTCGAGAGAACAATGGCAAAATGGCAGCCTAGGCCTTGGCTCTCAAAACCGTTCTTGTTATaGTCGTCTCCAAACAGGTCC | + |
Preference number: 4 (lower is better) Translates to: FLVLERTMAKWQPRPWLSKPFLL*SSPNRS Trigger: GGACCTGTTTGGAGACGACCATAACAAGAACGGTTT...TGAGAGCCAAGGCCTAGGCTGCCATTTTGCCATTGTTCTCTCGAGAACCAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR GCA 90 bp | GTGGTGATGTGGGAAGGGGTATATGAAGGCAGGGAGAAAACTAATGTTGAGACTCCACAAAGTAGGAATTaGTCCTGTCCTCCTCAGCAT | + |
Preference number: 4 (lower is better) Translates to: VVMWEGVYEGREKTNVETPQSRN*SCPPQH Trigger: ATGCTGAGGAGGACAGGAGCAATTCCTACTTTGTGG...AGTCTCAACATTAGTTTTCTCCCTGCCTTCATATACCCCTTCCCACATCACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR CCA 90 bp | CTAATGTTGAGACTGAGACCAGGAGAGCAAACAATAGAATCTCGGCAACAGTTTCAGAGGGACTCGGAATaGCTGGTTTCTCCTGTTCCA | + |
Preference number: 4 (lower is better) Translates to: LMLRLRPGEQTIESRQQFQRDSE*LVSPVP Trigger: TGGAACAGGAGAAACCAGCCATTCCGAGTCCCTCTG...AAACTGTTGCCGAGATTCTATTGTTTGCTCTCCTGGTCTCAGTCTCAACATTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR GCA 90 bp | GGGAGAAAACTAATGTTGAGACTGAGACCAGGAGAGCAAACAATAGAATCTCGGTCTTTGCACTTCTGCTaGTCTGCGTCTGAGATGGTA | + |
Preference number: 4 (lower is better) Translates to: GRKLMLRLRPGEQTIESRSLHFC*SASEMV Trigger: TACCATCTCAGACGCAGAGCAGCAGAAGTGCAAAGA...CCGAGATTCTATTGTTTGCTCTCCTGGTCTCAGTCTCAACATTAGTTTTCTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR TCA 90 bp | CTAATGTTGAGACTGAGACCAGGAGAGCAAACAATAGAATCTCGGCAACAGTTTGAAGTCCATACACAGTaGAGATGTTGGTGTCTGGAC | + |
Preference number: 4 (lower is better) Translates to: LMLRLRPGEQTIESRQQFEVHTQ*RCWCLD Trigger: GTCCAGACACCAACATCTTCACTGTGTATGGACTTC...AAACTGTTGCCGAGATTCTATTGTTTGCTCTCCTGGTCTCAGTCTCAACATTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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3UTR CAA 72 bp | GGGAAGGGGTATATGAAGGCAGGGAGAAAACTAATGTaGAGACTGAGACCAGGAGAGCAAACAATAGAATCT | + |
Preference number: 4 (lower is better) Translates to: GKGYMKAGRKLM*RLRPGEQTIES Trigger: AGATTCTATTGTTTGCTCTCCTGGTCTCAGTCTCAACATTAGTTTTCTCCCTGCCTTCATATACCCCTTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR GCA 90 bp | AAGTGGGAAGACTTGGCCTTAACAATCATCCTGATTCTAGAAATTTCTCTTTGGGTGGGATGGCATTTGTaGCAGGTTGCAAGCTTGGAA | + |
Preference number: 4 (lower is better) Translates to: KWEDLALTIILILEISLWVGWHL*QVASLE Trigger: TTCCAAGCTTGCAACCTGGCACAAATGCCATCCCAC...CCAAAGAGAAATTTCTAGAATCAGGATGATTGTTAAGGCCAAGTCTTCCCACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR CCA 90 bp | AAACCAATGTCTTTCTTTAGCACAAACACAGCAGTGGCCCATGGCAATCAGACGGAGGAGTCAAACATTTaGAAACCGTTCTTGTTATGG | + |
Preference number: 4 (lower is better) Translates to: KPMSFFSTNTAVAHGNQTEESNI*KPFLLW Trigger: CCATAACAAGAACGGTTTCCAAATGTTTGACTCCTC...CGTCTGATTGCCATGGGCCACTGCTGTGTTTGTGCTAAAGAAAGACATTGGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CCA 90 bp | GAAGCCCCGCTGGATGAGGGAGCCGATGGGCACCTCCCAGCCCGCTaGGCTGCCCAAGTAGGGGTGGCAGGAACGCTTGCCGCGAAGCTC | + |
Preference number: 5 (lower is better) Translates to: EAPLDEGADGHLPAR*AAQVGVAGTLAAKL Trigger: GAGCTTCGCGGCAAGCGTTCCTGCCACCCCTACTTGGGCAGCCCAGCGGGCTGGGAGGTGCCCATCGGCTCCCTCATCCAGCGGGGCTTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS GCA 90 bp | AGCATACAGCTCCCCGGCCGCCGGAACCAGGCCGTACACCTTTCCTaGCCTGTAAATGTCCTCGCCCCTCAGAGTCACAGCGTCAGTGTG | + |
Preference number: 5 (lower is better) Translates to: SIQLPGRRNQAVHLS*PVNVLAPQSHSVSV Trigger: CACACTGACGCTGTGACTCTGAGGGGCGAGGACATTTACAGGGCAGGAAAGGTGTACGGCCTGGTTCCGGCGGCCGGGGAGCTGTATGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS TCA 90 bp | CAGCATGAGCAGGCACCTTGGCCAGGTGGCAACGTCTCCACTCAGTaGTGTCGGCTCGGCTGCCATCCCTGCATAGTAGCTGGAAGTCCT | + |
Preference number: 5 (lower is better) Translates to: QHEQAPWPGGNVSTQ*CRLGCHPCIVAGSP Trigger: AGGACTTCCAGCTACTATGCAGGGATGGCAGCCGAGCCGACATCACTGAGTGGAGACGTTGCCACCTGGCCAAGGTGCCTGCTCATGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS TCA 90 bp | CCAAGTAGGGGTGGCAGGAACGCTTGCCGCGAAGCTCGTCCAGGGTaGAGGAGTAGGAGCTGTCCCTTCTTGCCACAGCCACCACAAAGT | + |
Preference number: 5 (lower is better) Translates to: PSRGGRNACREARPG*RSRSCPFLPQPPQS Trigger: ACTTTGTGGTGGCTGTGGCAAGAAGGGACAGCTCCTACTCCTTCACCCTGGACGAGCTTCGCGGCAAGCGTTCCTGCCACCCCTACTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS GCA 90 bp | TGCCCCAGGAAGGCAGGGTGTTTCCATCAGTATTTTCCAGCACTGTaGTGTGCTTCACGAAGGCCACGTCACCGGCTCCTTCCGCCAGGC | + |
Preference number: 5 (lower is better) Translates to: CPRKAGCFHQYFPAL*CASRRPRHRLLPPG Trigger: GCCTGGCGGAAGGAGCCGGTGACGTGGCCTTCGTGAAGCACAGCACAGTGCTGGAAAATACTGATGGAAACACCCTGCCTTCCTGGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CCA 90 bp | CTCCACTCAGTGATGTCGGCTCGGCTGCCATCCCTGCATAGTAGCTaGAAGTCCTCTGACATCAGGGACTTGCCCCAGGAAGGCAGGGTG | + |
Preference number: 5 (lower is better) Translates to: LHSVMSARLPSLHSS*KSSDIRDLPQEGRV Trigger: CACCCTGCCTTCCTGGGGCAAGTCCCTGATGTCAGAGGACTTCCAGCTACTATGCAGGGATGGCAGCCGAGCCGACATCACTGAGTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR CAA 90 bp | GTGAAGGGAAGACAGGGCTCTCCCCAATCCCCTGGCTCGTGGTATATCCCAAGGCCTGTGTGGCAGGACTaGACGCCCTTCAGGGTGTTG | + |
Preference number: 5 (lower is better) Translates to: VKGRQGSPQSPGSWYIPRPVWQD*TPFRVL Trigger: CAACACCCTGAAGGGCGTCAAGTCCTGCCACACAGG...CCTTGGGATATACCACGAGCCAGGGGATTGGGGAGAGCCCTGTCTTCCCTTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR CAA 90 bp | GTGTGCTCCTTCCTTGGCATCTCACCAGGTGGCCGGTACAGAGGCTGGAAGCTGCTGCTCCCCACACATTaGTTGCGGCCCTTCTCGTCT | + |
Preference number: 5 (lower is better) Translates to: VCSFLGISPGGRYRGWKLLLPTH*LRPFSS Trigger: AGACGAGAAGGGCCGCAACAAATGTGTGGGGAGCAG...CAGCTTCCAGCCTCTGTACCGGCCACCTGGTGAGATGCCAAGGAAGGAGCACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS GCA 90 bp | AGTGGTCAGCGGAGTTGCCCTGGACGCAGAGAAGGGAAGGACGAATaGCAGCTCCCTGGAAGGCCTCGCTCATGTCTTTGCACTTCTGCT | + |
Preference number: 5 (lower is better) Translates to: SGQRSCPGRREGKDE*QLPGRPRSCLCTSA Trigger: AGCAGAAGTGCAAAGACATGAGCGAGGCCTTCCAGGGAGCTGGCATTCGTCCTTCCCTTCTCTGCGTCCAGGGCAACTCCGCTGACCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS GCA 90 bp | GTCATAGACTTCCCCCACCACTGGCTTCAGGCCGTGCTCCTTCCCTaGCTCATAGATGGCCCCTCCATCCAGGGTGATGGCATCTGCTTT | + |
Preference number: 5 (lower is better) Translates to: VIDFPHHWLQAVLLP*LIDGPSIQGDGICF Trigger: AAAGCAGATGCCATCACCCTGGATGGAGGGGCCATCTATGAGGCAGGGAAGGAGCACGGCCTGAAGCCAGTGGTGGGGGAAGTCTATGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS GCA 90 bp | AGTAGGAGCTGTCCCTTCTTGCCACAGCCACCACAAAGTAGGAATTaGTCCTGTCCTCCTCAGCATACAGCTCCCCGGCCGCCGGAACCA | + |
Preference number: 5 (lower is better) Translates to: SRSCPFLPQPPQSRN*SCPPQHTAPRPPEP Trigger: TGGTTCCGGCGGCCGGGGAGCTGTATGCTGAGGAGGACAGGAGCAATTCCTACTTTGTGGTGGCTGTGGCAAGAAGGGACAGCTCCTACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS GCA 90 bp | GATGTTGGTGTCTGGACGGACCATGACAGCGTGGGATGGCATTTGTaGCAGGTTGCAAGCTTGGAACTGGTCTACCTCAGCCCGTGCCCC | + |
Preference number: 5 (lower is better) Translates to: DVGVWTDHDSVGWHL*QVASLELVYLSPCP Trigger: GGGGCACGGGCTGAGGTAGACCAGTTCCAAGCTTGCAACCTGGCACAAATGCCATCCCACGCTGTCATGGTCCGTCCAGACACCAACATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CCA 90 bp | CGGACCATGACAGCGTGGGATGGCATTTGTGCCAGGTTGCAAGCTTaGAACTGGTCTACCTCAGCCCGTGCCCCATTGGGGCACAGTAGT | + |
Preference number: 5 (lower is better) Translates to: RTMTAWDGICARLQA*NWSTSARAPLGHSS Trigger: ACTACTGTGCCCCAATGGGGCACGGGCTGAGGTAGACCAGTTCCAAGCTTGCAACCTGGCACAAATGCCATCCCACGCTGTCATGGTCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS TCA 90 bp | TGGATCTGCTCCATGCAGTGCTCAGGGGACTCGGCCGACACACACTaGATTTCCGGCTTGAGATTCTGGCGGCTGAAGGCCACAGCCATA | + |
Preference number: 5 (lower is better) Translates to: WICSMQCSGDSADTH*ISGLRFWRLKATAI Trigger: TATGGCTGTGGCCTTCAGCCGCCAGAATCTCAAGCCGGAAATTCAGTGTGTGTCGGCCGAGTCCCCTGAGCACTGCATGGAGCAGATCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CCA 90 bp | AGGCCTCGCTCATGTCTTTGCACTTCTGCTGCTCTGCGTCTGAGATaGTACACCACTGCACCTCCATCACACAGACGACAGTGCGCAGGG | + |
Preference number: 5 (lower is better) Translates to: RPRSCLCTSAALRLR*YTTAPPSHRRQCAG Trigger: CCCTGCGCACTGTCGTCTGTGTGATGGAGGTGCAGTGGTGTACCATCTCAGACGCAGAGCAGCAGAAGTGCAAAGACATGAGCGAGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS TCA 90 bp | CTGGAAGGCCTCGCTCATGTCTTTGCACTTCTGCTGCTCTGCGTCTaGGATGGTACACCACTGCACCTCCATCACACAGACGACAGTGCG | + |
Preference number: 5 (lower is better) Translates to: LEGLAHVFALLLLCV*DGTPLHLHHTDDSA Trigger: CGCACTGTCGTCTGTGTGATGGAGGTGCAGTGGTGTACCATCTCAGACGCAGAGCAGCAGAAGTGCAAAGACATGAGCGAGGCCTTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS GCA 90 bp | ATGCCAGCTCCCTGGAAGGCCTCGCTCATGTCTTTGCACTTCTGCTaGTCTGCGTCTGAGATGGTACACCACTGCACCTCCATCACACAG | + |
Preference number: 5 (lower is better) Translates to: MPAPWKASLMSLHFC*SASEMVHHCTSITQ Trigger: CTGTGTGATGGAGGTGCAGTGGTGTACCATCTCAGACGCAGAGCAGCAGAAGTGCAAAGACATGAGCGAGGCCTTCCAGGGAGCTGGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS GCA 90 bp | CGAATGCCAGCTCCCTGGAAGGCCTCGCTCATGTCTTTGCACTTCTaGTGCTCTGCGTCTGAGATGGTACACCACTGCACCTCCATCACA | + |
Preference number: 5 (lower is better) Translates to: RMPAPWKASLMSLHF*CSASEMVHHCTSIT Trigger: TGTGATGGAGGTGCAGTGGTGTACCATCTCAGACGCAGAGCAGCAGAAGTGCAAAGACATGAGCGAGGCCTTCCAGGGAGCTGGCATTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR CAA 90 bp | GATTTTCCTCAGGATTGTGTGACTCTGGCTGGGACACTGCCAGGACCTTCTCTAGGCACGCAGCTGGCATaGAAGAACTGGCTCACCGCT | + |
Preference number: 5 (lower is better) Translates to: DFPQDCVTLAGTLPGPSLGTQLA*KNWLTA Trigger: AGCGGTGAGCCAGTTCTTCAATGCCAGCTGCGTGCC...TAGAGAAGGTCCTGGCAGTGTCCCAGCCAGAGTCACACAATCCTGAGGAAAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR CAA 90 bp | GTGAAGGGAAGACAGGGCTCTCCCCAATCCCCTGGCTCGTGGTATATCCCAAGGCGGACTGTAGCATCTTaGAAAAGCAGGTCTTGGCTG | + |
Preference number: 5 (lower is better) Translates to: VKGRQGSPQSPGSWYIPRRTVAS*KSRSWL Trigger: CAGCCAAGACCTGCTTTTCAAAGATGCTACAGTCCG...CCTTGGGATATACCACGAGCCAGGGGATTGGGGAGAGCCCTGTCTTCCCTTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS TCA 90 bp | CAGCCCGTGCCCCATTGGGGCACAGTAGTTCATAGTCTTGCCACCTaGGGTGAGAAGCCCAAGGCTCAGGATTGTGACCATTTGTGTTCT | + |
Preference number: 5 (lower is better) Translates to: QPVPHWGTVVHSLAT*GEKPKAQDCDHLCS Trigger: AGAACACAAATGGTCACAATCCTGAGCCTTGGGCTTCTCACCTCAGGTGGCAAGACTATGAACTACTGTGCCCCAATGGGGCACGGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CCA 90 bp | AGGGTGATGGCATCTGCTTTTTGTTCCTTGATGAGCTGGACACAGTaGTCAGCGGAGTTGCCCTGGACGCAGAGAAGGGAAGGACGAATG | + |
Preference number: 5 (lower is better) Translates to: RVMASAFCSLMSWTQ*SAELPWTQRREGRM Trigger: CATTCGTCCTTCCCTTCTCTGCGTCCAGGGCAACTCCGCTGACCACTGTGTCCAGCTCATCAAGGAACAAAAAGCAGATGCCATCACCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CCA 90 bp | CTGCTGTCTTCATGGCTGAACAGAAGCTGGCCTTCGTTGAGCAGTTaGAATATGAGACCGCCATCCATGTCACCCCTGACCACCACAGCA | + |
Preference number: 5 (lower is better) Translates to: LLSSWLNRSWPSLSS*NMRPPSMSPLTTTA Trigger: TGCTGTGGTGGTCAGGGGTGACATGGATGGCGGTCTCATATTCCAACTGCTCAACGAAGGCCAGCTTCTGTTCAGCCATGAAGACAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CCA 90 bp | CACAGTGAAGATGTTGGTGTCTGGACGGACCATGACAGCGTGGGATaGCATTTGTGCCAGGTTGCAAGCTTGGAACTGGTCTACCTCAGC | + |
Preference number: 5 (lower is better) Translates to: HSEDVGVWTDHDSVG*HLCQVASLELVYLS Trigger: GCTGAGGTAGACCAGTTCCAAGCTTGCAACCTGGCACAAATGCCATCCCACGCTGTCATGGTCCGTCCAGACACCAACATCTTCACTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CCA 90 bp | CTGGGCCTTGTCCAGAAGTCCATACACAGTGAAGATGTTGGTGTCTaGACGGACCATGACAGCGTGGGATGGCATTTGTGCCAGGTTGCA | + |
Preference number: 5 (lower is better) Translates to: LGLVQKSIHSEDVGV*TDHDSVGWHLCQVA Trigger: TGCAACCTGGCACAAATGCCATCCCACGCTGTCATGGTCCGTCCAGACACCAACATCTTCACTGTGTATGGACTTCTGGACAAGGCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CCA 90 bp | ATAGTCAGGACCCAGCCAGTCCAGGTATGTGGTTTTCTCCCGGACTaGCACCGCTCGGACTGTAGCATCTTTGAAAAGCAGGTCTTGGCT | + |
Preference number: 5 (lower is better) Translates to: IVRTQPVQVCGFLPD*HRSDCSIFEKQVLA Trigger: AGCCAAGACCTGCTTTTCAAAGATGCTACAGTCCGAGCGGTGCCAGTCCGGGAGAAAACCACATACCTGGACTGGCTGGGTCCTGACTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR CAA 90 bp | GATTTTCCTCAGGATTGTGTGACTCTGGCTGGGACACTGCCAGGACCTTCTCTAGCCTCGCTCATGTCTTaGCACTTCTGCTGCTCTGCG | + |
Preference number: 5 (lower is better) Translates to: DFPQDCVTLAGTLPGPSLASLMS*HFCCSA Trigger: CGCAGAGCAGCAGAAGTGCAAAGACATGAGCGAGGC...TAGAGAAGGTCCTGGCAGTGTCCCAGCCAGAGTCACACAATCCTGAGGAAAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR CAA 90 bp | GTGAAGGGAAGACAGGGCTCTCCCCAATCCCCTGGCTCGTGGTATATCCCAAGGAGAAGCTGGCCTTCGTaGAGCAGTTGGAATATGAGA | + |
Preference number: 5 (lower is better) Translates to: VKGRQGSPQSPGSWYIPRRSWPS*SSWNMR Trigger: TCTCATATTCCAACTGCTCAACGAAGGCCAGCTTCT...CCTTGGGATATACCACGAGCCAGGGGATTGGGGAGAGCCCTGTCTTCCCTTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS GCA 90 bp | TGCCATCCCTGCATAGTAGCTGGAAGTCCTCTGACATCAGGGACTTaGCCCAGGAAGGCAGGGTGTTTCCATCAGTATTTTCCAGCACTG | + |
Preference number: 5 (lower is better) Translates to: CHPCIVAGSPLTSGT*PRKAGCFHQYFPAL Trigger: CAGTGCTGGAAAATACTGATGGAAACACCCTGCCTTCCTGGGGCAAGTCCCTGATGTCAGAGGACTTCCAGCTACTATGCAGGGATGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CCA 90 bp | CCATACACAGTGAAGATGTTGGTGTCTGGACGGACCATGACAGCGTaGGATGGCATTTGTGCCAGGTTGCAAGCTTGGAACTGGTCTACC | + |
Preference number: 5 (lower is better) Translates to: PYTVKMLVSGRTMTA*DGICARLQAWNWST Trigger: GGTAGACCAGTTCCAAGCTTGCAACCTGGCACAAATGCCATCCCACGCTGTCATGGTCCGTCCAGACACCAACATCTTCACTGTGTATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS TCA 90 bp | TCCAAAATAATCACCAACGGCTTTGAGCACATCACAGCCCATCACTaGCAGATGGCCGCTCTCTACGAGGTAACCGACAGGCACGTTCCA | + |
Preference number: 5 (lower is better) Translates to: SKIITNGFEHITAHH*QMAALYEVTDRHVP Trigger: TGGAACGTGCCTGTCGGTTACCTCGTAGAGAGCGGCCATCTGTCAGTGATGGGCTGTGATGTGCTCAAAGCCGTTGGTGATTATTTTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR CAA 90 bp | TTTCTGGTTCTCGAGAGAACAATGGCAAAATGGCAGCCTAGGCCTTGGCTCTCACTCTTGTCACACACATaGTGCCCAGAAGAGTCGCCA | + |
Preference number: 5 (lower is better) Translates to: FLVLERTMAKWQPRPWLSLLSHT*CPEESP Trigger: TGGCGACTCTTCTGGGCACAATGTGTGTGACAAGAG...TGAGAGCCAAGGCCTAGGCTGCCATTTTGCCATTGTTCTCTCGAGAACCAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR CAA 90 bp | CTAATGTTGAGACTGAGACCAGGAGAGCAAACAATAGAATCTCGGCAACAGTTTAGGACATCACAGTCCTaGGGCCGGATGAAGCCCCGC | + |
Preference number: 5 (lower is better) Translates to: LMLRLRPGEQTIESRQQFRTSQS*GRMKPR Trigger: GCGGGGCTTCATCCGGCCCAAGGACTGTGATGTCCT...AAACTGTTGCCGAGATTCTATTGTTTGCTCTCCTGGTCTCAGTCTCAACATTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR CAA 90 bp | AAGACACAAATAGCTCCCGGCCCACGCTGCTTCCAGTGTGCTGACGATGGCTGTATTTGGAAACCGTTCTaGTTATGGTCGTCTCCAAAC | + |
Preference number: 5 (lower is better) Translates to: KTQIAPGPRCFQCADDGCIWKPF*LWSSPN Trigger: GTTTGGAGACGACCATAACAAGAACGGTTTCCAAAT...ACAGCCATCGTCAGCACACTGGAAGCAGCGTGGGCCGGGAGCTATTTGTGTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR CAA 90 bp | CAAGGCCCAGCTCATGACAGGAAGTTATTTTGGGTTAGCTCCTACTTCTTCAGAAGCGTGGGATGGCATTaGTGCCAGGTTGCAAGCTTG | + |
Preference number: 5 (lower is better) Translates to: QGPAHDRKLFWVSSYFFRSVGWH*CQVASL Trigger: CAAGCTTGCAACCTGGCACAAATGCCATCCCACGCT...TCTGAAGAAGTAGGAGCTAACCCAAAATAACTTCCTGTCATGAGCTGGGCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR CAA 90 bp | CAAGGCCCAGCTCATGACAGGAAGTTATTTTGGGTTAGCTCCTACTTCTTCAGAGGCATTTGTGCCAGGTaGCAAGCTTGGAACTGGTCT | + |
Preference number: 5 (lower is better) Translates to: QGPAHDRKLFWVSSYFFRGICAR*QAWNWS Trigger: AGACCAGTTCCAAGCTTGCAACCTGGCACAAATGCC...TCTGAAGAAGTAGGAGCTAACCCAAAATAACTTCCTGTCATGAGCTGGGCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR CAA 90 bp | TCCACCCTGCATCAAGTTTCTCACACACTAACATTCTTAATGGGAAGGTGGGGGGATGGCATCTGCTTTTaGTTCCTTGATGAGCTGGAC | + |
Preference number: 5 (lower is better) Translates to: STLHQVSHTLTFLMGRWGDGICF*FLDELD Trigger: GTCCAGCTCATCAAGGAACAAAAAGCAGATGCCATC...CCCCCACCTTCCCATTAAGAATGTTAGTGTGTGAGAAACTTGATGCAGGGTGGA 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR CAA 90 bp | CTAATGTTGAGACTGAGACCAGGAGAGCAAACAATAGAATCTCGGCAACAGTTTAGGAGCTGTCCCTTCTaGCCACAGCCACCACAAAGT | + |
Preference number: 5 (lower is better) Translates to: LMLRLRPGEQTIESRQQFRSCPF*PQPPQS Trigger: ACTTTGTGGTGGCTGTGGCAAGAAGGGACAGCTCCT...AAACTGTTGCCGAGATTCTATTGTTTGCTCTCCTGGTCTCAGTCTCAACATTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS TCA 90 bp | GGCACCGCTCGGACTGTAGCATCTTTGAAAAGCAGGTCTTGGCTGTaGTATTTGGAGGAGTCAAACATTTGGAAACCGTTCTTGTTATGG | + |
Preference number: 5 (lower is better) Translates to: GTARTVASLKSRSWL*YLEESNIWKPFLLW Trigger: CCATAACAAGAACGGTTTCCAAATGTTTGACTCCTCCAAATATCACAGCCAAGACCTGCTTTTCAAAGATGCTACAGTCCGAGCGGTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR CAA 90 bp | ACCCTGCATCAAGTTTCTCACACACTAACATTCTTAATGGGAAGGTGGGGGCACTTTGAAAAGCAGGTCTaGGCTGTGATATTTGGAGGA | + |
Preference number: 5 (lower is better) Translates to: TLHQVSHTLTFLMGRWGHFEKQV*AVIFGG Trigger: TCCTCCAAATATCACAGCCAAGACCTGCTTTTCAAA...GTGCCCCCACCTTCCCATTAAGAATGTTAGTGTGTGAGAAACTTGATGCAGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS-3UTR CAA 90 bp | CCTACTTCTTCAGACAAGCAGATATGTTCAGATATGTTCACACGGATAAGGTGTGTGTTGATGGTAACATaGGAATTCCTCCTGACCACA | + |
Preference number: 5 (lower is better) Translates to: PTSSDKQICSDMFTRIRCVLMVT*EFLLTT Trigger: TGTGGTCAGGAGGAATTCCAATGTTACCATCAACAC...ACACCTTATCCGTGTGAACATATCTGAACATATCTGCTTGTCTGAAGAAGTAGG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CCA 72 bp | CTGGATGAGGGAGCCGATGGGCACCTCCCAGCCCGCTaGGCTGCCCAAGTAGGGGTGGCAGGAACGCTTGCC | + |
Preference number: 6 (lower is better) Translates to: LDEGADGHLPAR*AAQVGVAGTLA Trigger: GGCAAGCGTTCCTGCCACCCCTACTTGGGCAGCCCAGCGGGCTGGGAGGTGCCCATCGGCTCCCTCATCCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CCA 72 bp | AGGACATCACAGTCCTTGGGCCGGATGAAGCCCCGCTaGATGAGGGAGCCGATGGGCACCTCCCAGCCCGCT | + |
Preference number: 6 (lower is better) Translates to: RTSQSLGRMKPR*MREPMGTSQPA Trigger: AGCGGGCTGGGAGGTGCCCATCGGCTCCCTCATCCAGCGGGGCTTCATCCGGCCCAAGGACTGTGATGTCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS GCA 72 bp | CTCCCCGGCCGCCGGAACCAGGCCGTACACCTTTCCTaGCCTGTAAATGTCCTCGCCCCTCAGAGTCACAGC | + |
Preference number: 6 (lower is better) Translates to: LPGRRNQAVHLS*PVNVLAPQSHS Trigger: GCTGTGACTCTGAGGGGCGAGGACATTTACAGGGCAGGAAAGGTGTACGGCCTGGTTCCGGCGGCCGGGGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CCA 72 bp | TCGCCCCTCAGAGTCACAGCGTCAGTGTGCCCAGCCTaGATCTGCTCCATGCAGTGCTCAGGGGACTCGGCC | + |
Preference number: 6 (lower is better) Translates to: SPLRVTASVCPA*ICSMQCSGDSA Trigger: GGCCGAGTCCCCTGAGCACTGCATGGAGCAGATCCAGGCTGGGCACACTGACGCTGTGACTCTGAGGGGCGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS TCA 72 bp | AGACCGCCATCCATGTCACCCCTGACCACCACAGCATaGGCAGGCACCTTGGCCAGGTGGCAACGTCTCCAC | + |
Preference number: 6 (lower is better) Translates to: RPPSMSPLTTTA*AGTLARWQRLH Trigger: GTGGAGACGTTGCCACCTGGCCAAGGTGCCTGCTCATGCTGTGGTGGTCAGGGGTGACATGGATGGCGGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS TCA 72 bp | GGTGGCAGGAACGCTTGCCGCGAAGCTCGTCCAGGGTaGAGGAGTAGGAGCTGTCCCTTCTTGCCACAGCCA | + |
Preference number: 6 (lower is better) Translates to: GGRNACREARPG*RSRSCPFLPQP Trigger: TGGCTGTGGCAAGAAGGGACAGCTCCTACTCCTTCACCCTGGACGAGCTTCGCGGCAAGCGTTCCTGCCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS GCA 72 bp | CTCAGAGTCACAGCGTCAGTGTGCCCAGCCTGGATCTaGTCCATGCAGTGCTCAGGGGACTCGGCCGACACA | + |
Preference number: 6 (lower is better) Translates to: LRVTASVCPAWI*SMQCSGDSADT Trigger: TGTGTCGGCCGAGTCCCCTGAGCACTGCATGGAGCAGATCCAGGCTGGGCACACTGACGCTGTGACTCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CCA 72 bp | GAGTCGCCACGGCAGAGGCGACAGAGGGACTCGGAATaGCTGGTTTCTCCTGTTCCAGGGACACAGCTGCCT | + |
Preference number: 6 (lower is better) Translates to: ESPRQRRQRDSE*LVSPVPGTQLP Trigger: AGGCAGCTGTGTCCCTGGAACAGGAGAAACCAGCCATTCCGAGTCCCTCTGTCGCCTCTGCCGTGGCGACTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CAA 72 bp | AAGAACTGGCTCACCGCTGTGAGGACATCACAGTCCTaGGGCCGGATGAAGCCCCGCTGGATGAGGGAGCCG | + |
Preference number: 6 (lower is better) Translates to: KNWLTAVRTSQS*GRMKPRWMREP Trigger: CGGCTCCCTCATCCAGCGGGGCTTCATCCGGCCCAAGGACTGTGATGTCCTCACAGCGGTGAGCCAGTTCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CCA 72 bp | TTGATGAGCTGGACACAGTGGTCAGCGGAGTTGCCCTaGACGCAGAGAAGGGAAGGACGAATGCCAGCTCCC | + |
Preference number: 6 (lower is better) Translates to: LMSWTQWSAELP*TQRREGRMPAP Trigger: GGGAGCTGGCATTCGTCCTTCCCTTCTCTGCGTCCAGGGCAACTCCGCTGACCACTGTGTCCAGCTCATCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CAA 72 bp | CGGACCATGACAGCGTGGGATGGCATTTGTGCCAGGTaGCAAGCTTGGAACTGGTCTACCTCAGCCCGTGCC | + |
Preference number: 6 (lower is better) Translates to: RTMTAWDGICAR*QAWNWSTSARA Trigger: GGCACGGGCTGAGGTAGACCAGTTCCAAGCTTGCAACCTGGCACAAATGCCATCCCACGCTGTCATGGTCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS GCA 72 bp | CCCTGGAAGGCCTCGCTCATGTCTTTGCACTTCTGCTaGTCTGCGTCTGAGATGGTACACCACTGCACCTCC | + |
Preference number: 6 (lower is better) Translates to: PWKASLMSLHFC*SASEMVHHCTS Trigger: GGAGGTGCAGTGGTGTACCATCTCAGACGCAGAGCAGCAGAAGTGCAAAGACATGAGCGAGGCCTTCCAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS GCA 72 bp | GCTCCCTGGAAGGCCTCGCTCATGTCTTTGCACTTCTaGTGCTCTGCGTCTGAGATGGTACACCACTGCACC | + |
Preference number: 6 (lower is better) Translates to: APWKASLMSLHF*CSASEMVHHCT Trigger: GGTGCAGTGGTGTACCATCTCAGACGCAGAGCAGCAGAAGTGCAAAGACATGAGCGAGGCCTTCCAGGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS GCA 72 bp | TGTCCCTTCTTGCCACAGCCACCACAAAGTAGGAATTaGTCCTGTCCTCCTCAGCATACAGCTCCCCGGCCG | + |
Preference number: 6 (lower is better) Translates to: CPFLPQPPQSRN*SCPPQHTAPRP Trigger: CGGCCGGGGAGCTGTATGCTGAGGAGGACAGGAGCAATTCCTACTTTGTGGTGGCTGTGGCAAGAAGGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS GCA 72 bp | CGTAGTATCTCTCCTGGCTGCTCCCCACACATTTGTTaGGGCCCTTCTCGTCTCCCACGCAGAGCGCACATA | + |
Preference number: 6 (lower is better) Translates to: RSISPGCSPHIC*GPSRLPRRAHI Trigger: TATGTGCGCTCTGCGTGGGAGACGAGAAGGGCCGCAACAAATGTGTGGGGAGCAGCCAGGAGAGATACTACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS GCA 72 bp | AAAGACAGTCGTGTGCTTGACGAAAGCCACGTCCCCTaGATGCTCCACAAGGCACCTGAAGGCCCCGCTGTA | + |
Preference number: 6 (lower is better) Translates to: KDSRVLDESHVP*MLHKAPEGPAV Trigger: TACAGCGGGGCCTTCAGGTGCCTTGTGGAGCATGCAGGGGACGTGGCTTTCGTCAAGCACACGACTGTCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CCA 72 bp | GGCACGTTCCAGCCCACAGTCCGGTTAATGCCTGTGTaGCAGGACTTGACGCCCTTCAGGGTGTTGATGGTA | + |
Preference number: 6 (lower is better) Translates to: GTFQPTVRLMPV*QDLTPFRVLMV Trigger: TACCATCAACACCCTGAAGGGCGTCAAGTCCTGCCACACAGGCATTAACCGGACTGTGGGCTGGAACGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CCA 72 bp | GTGATGTCGGCTCGGCTGCCATCCCTGCATAGTAGCTaGAAGTCCTCTGACATCAGGGACTTGCCCCAGGAA | + |
Preference number: 6 (lower is better) Translates to: VMSARLPSLHSS*KSSDIRDLPQE Trigger: TTCCTGGGGCAAGTCCCTGATGTCAGAGGACTTCCAGCTACTATGCAGGGATGGCAGCCGAGCCGACATCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CCA 72 bp | TGGGATGGCATTTGTGCCAGGTTGCAAGCTTGGAACTaGTCTACCTCAGCCCGTGCCCCATTGGGGCACAGT | + |
Preference number: 6 (lower is better) Translates to: WDGICARLQAWN*STSARAPLGHS Trigger: ACTGTGCCCCAATGGGGCACGGGCTGAGGTAGACCAGTTCCAAGCTTGCAACCTGGCACAAATGCCATCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CAA 90 bp | TCTGCTTTTTGTTCCTTGATGAGCTGGACACAGTGGTCAGCGGAGTaGCCCTGGACGCAGAGAAGGGAAGGACGAATGCCAGCTCCCTGG | + |
Preference number: 6 (lower is better) Translates to: SAFCSLMSWTQWSAE*PWTQRREGRMPAPW Trigger: CCAGGGAGCTGGCATTCGTCCTTCCCTTCTCTGCGTCCAGGGCAACTCCGCTGACCACTGTGTCCAGCTCATCAAGGAACAAAAAGCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CAA 90 bp | GAAGATGTTGGTGTCTGGACGGACCATGACAGCGTGGGATGGCATTaGTGCCAGGTTGCAAGCTTGGAACTGGTCTACCTCAGCCCGTGC | + |
Preference number: 6 (lower is better) Translates to: EDVGVWTDHDSVGWH*CQVASLELVYLSPC Trigger: GCACGGGCTGAGGTAGACCAGTTCCAAGCTTGCAACCTGGCACAAATGCCATCCCACGCTGTCATGGTCCGTCCAGACACCAACATCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS GCA 72 bp | AGGGTGTTTCCATCAGTATTTTCCAGCACTGTGCTGTaGTTCACGAAGGCCACGTCACCGGCTCCTTCCGCC | + |
Preference number: 6 (lower is better) Translates to: RVFPSVFSSTVL*FTKATSPAPSA Trigger: GGCGGAAGGAGCCGGTGACGTGGCCTTCGTGAAGCACAGCACAGTGCTGGAAAATACTGATGGAAACACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS GCA 72 bp | GTCTGGACGGACCATGACAGCGTGGGATGGCATTTGTaGCAGGTTGCAAGCTTGGAACTGGTCTACCTCAGC | + |
Preference number: 6 (lower is better) Translates to: VWTDHDSVGWHL*QVASLELVYLS Trigger: GCTGAGGTAGACCAGTTCCAAGCTTGCAACCTGGCACAAATGCCATCCCACGCTGTCATGGTCCGTCCAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CAA 72 bp | TGTTCCTTGATGAGCTGGACACAGTGGTCAGCGGAGTaGCCCTGGACGCAGAGAAGGGAAGGACGAATGCCA | + |
Preference number: 6 (lower is better) Translates to: CSLMSWTQWSAE*PWTQRREGRMP Trigger: TGGCATTCGTCCTTCCCTTCTCTGCGTCCAGGGCAACTCCGCTGACCACTGTGTCCAGCTCATCAAGGAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CAA 72 bp | GGTGTCTGGACGGACCATGACAGCGTGGGATGGCATTaGTGCCAGGTTGCAAGCTTGGAACTGGTCTACCTC | + |
Preference number: 6 (lower is better) Translates to: GVWTDHDSVGWH*CQVASLELVYL Trigger: GAGGTAGACCAGTTCCAAGCTTGCAACCTGGCACAAATGCCATCCCACGCTGTCATGGTCCGTCCAGACACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS TCA 72 bp | ATCACCAACGGCTTTGAGCACATCACAGCCCATCACTaGCAGATGGCCGCTCTCTACGAGGTAACCGACAGG | + |
Preference number: 6 (lower is better) Translates to: ITNGFEHITAHH*QMAALYEVTDR Trigger: CCTGTCGGTTACCTCGTAGAGAGCGGCCATCTGTCAGTGATGGGCTGTGATGTGCTCAAAGCCGTTGGTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CCA 72 bp | GATGTTGGTGTCTGGACGGACCATGACAGCGTGGGATaGCATTTGTGCCAGGTTGCAAGCTTGGAACTGGTC | + |
Preference number: 6 (lower is better) Translates to: DVGVWTDHDSVG*HLCQVASLELV Trigger: GACCAGTTCCAAGCTTGCAACCTGGCACAAATGCCATCCCACGCTGTCATGGTCCGTCCAGACACCAACATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CCA 72 bp | ACCCAGCCAGTCCAGGTATGTGGTTTTCTCCCGGACTaGCACCGCTCGGACTGTAGCATCTTTGAAAAGCAG | + |
Preference number: 6 (lower is better) Translates to: TQPVQVCGFLPD*HRSDCSIFEKQ Trigger: CTGCTTTTCAAAGATGCTACAGTCCGAGCGGTGCCAGTCCGGGAGAAAACCACATACCTGGACTGGCTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CAA 72 bp | TGGGCCTTGTCCAGAAGTCCATACACAGTGAAGATGTaGGTGTCTGGACGGACCATGACAGCGTGGGATGGC | + |
Preference number: 6 (lower is better) Translates to: WALSRSPYTVKM*VSGRTMTAWDG Trigger: GCCATCCCACGCTGTCATGGTCCGTCCAGACACCAACATCTTCACTGTGTATGGACTTCTGGACAAGGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CAA 90 bp | AACAGGTCCTGGGCCTTGTCCAGAAGTCCATACACAGTGAAGATGTaGGTGTCTGGACGGACCATGACAGCGTGGGATGGCATTTGTGCC | + |
Preference number: 6 (lower is better) Translates to: NRSWALSRSPYTVKM*VSGRTMTAWDGICA Trigger: GGCACAAATGCCATCCCACGCTGTCATGGTCCGTCCAGACACCAACATCTTCACTGTGTATGGACTTCTGGACAAGGCCCAGGACCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS TCA 72 bp | CCCCATTGGGGCACAGTAGTTCATAGTCTTGCCACCTaGGGTGAGAAGCCCAAGGCTCAGGATTGTGACCAT | + |
Preference number: 6 (lower is better) Translates to: PHWGTVVHSLAT*GEKPKAQDCDH Trigger: ATGGTCACAATCCTGAGCCTTGGGCTTCTCACCTCAGGTGGCAAGACTATGAACTACTGTGCCCCAATGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CCA 72 bp | GCATCTGCTTTTTGTTCCTTGATGAGCTGGACACAGTaGTCAGCGGAGTTGCCCTGGACGCAGAGAAGGGAA | + |
Preference number: 6 (lower is better) Translates to: ASAFCSLMSWTQ*SAELPWTQRRE Trigger: TTCCCTTCTCTGCGTCCAGGGCAACTCCGCTGACCACTGTGTCCAGCTCATCAAGGAACAAAAAGCAGATGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CCA 72 bp | TCATGGCTGAACAGAAGCTGGCCTTCGTTGAGCAGTTaGAATATGAGACCGCCATCCATGTCACCCCTGACC | + |
Preference number: 6 (lower is better) Translates to: SWLNRSWPSLSS*NMRPPSMSPLT Trigger: GGTCAGGGGTGACATGGATGGCGGTCTCATATTCCAACTGCTCAACGAAGGCCAGCTTCTGTTCAGCCATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CCA 72 bp | GTGAAGATGTTGGTGTCTGGACGGACCATGACAGCGTaGGATGGCATTTGTGCCAGGTTGCAAGCTTGGAAC | + |
Preference number: 6 (lower is better) Translates to: VKMLVSGRTMTA*DGICARLQAWN Trigger: GTTCCAAGCTTGCAACCTGGCACAAATGCCATCCCACGCTGTCATGGTCCGTCCAGACACCAACATCTTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CAA 90 bp | CTGCCATCCCTGCATAGTAGCTGGAAGTCCTCTGACATCAGGGACTaGCCCCAGGAAGGCAGGGTGTTTCCATCAGTATTTTCCAGCACT | + |
Preference number: 6 (lower is better) Translates to: LPSLHSSWKSSDIRD*PQEGRVFPSVFSST Trigger: AGTGCTGGAAAATACTGATGGAAACACCCTGCCTTCCTGGGGCAAGTCCCTGATGTCAGAGGACTTCCAGCTACTATGCAGGGATGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS TCA 72 bp | TGTGACCATTTGTGTTCTCAAAGACAGTCGTGTGCTTaGCGAAAGCCACGTCCCCTGCATGCTCCACAAGGC | + |
Preference number: 6 (lower is better) Translates to: CDHLCSQRQSCA*RKPRPLHAPQG Trigger: GCCTTGTGGAGCATGCAGGGGACGTGGCTTTCGTCAAGCACACGACTGTCTTTGAGAACACAAATGGTCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS GCA 72 bp | CTCATAGATGGCCCCTCCATCCAGGGTGATGGCATCTaGTTTTTGTTCCTTGATGAGCTGGACACAGTGGTC | + |
Preference number: 6 (lower is better) Translates to: LIDGPSIQGDGI*FLFLDELDTVV Trigger: GACCACTGTGTCCAGCTCATCAAGGAACAAAAAGCAGATGCCATCACCCTGGATGGAGGGGCCATCTATGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CCA 72 bp | TCATGTCTTTGCACTTCTGCTGCTCTGCGTCTGAGATaGTACACCACTGCACCTCCATCACACAGACGACAG | + |
Preference number: 6 (lower is better) Translates to: SCLCTSAALRLR*YTTAPPSHRRQ Trigger: CTGTCGTCTGTGTGATGGAGGTGCAGTGGTGTACCATCTCAGACGCAGAGCAGCAGAAGTGCAAAGACATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CCA 72 bp | GTCCAGAAGTCCATACACAGTGAAGATGTTGGTGTCTaGACGGACCATGACAGCGTGGGATGGCATTTGTGC | + |
Preference number: 6 (lower is better) Translates to: VQKSIHSEDVGV*TDHDSVGWHLC Trigger: GCACAAATGCCATCCCACGCTGTCATGGTCCGTCCAGACACCAACATCTTCACTGTGTATGGACTTCTGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CAA 72 bp | CTGCATAGTAGCTGGAAGTCCTCTGACATCAGGGACTaGCCCCAGGAAGGCAGGGTGTTTCCATCAGTATTT | + |
Preference number: 6 (lower is better) Translates to: LHSSWKSSDIRD*PQEGRVFPSVF Trigger: AAATACTGATGGAAACACCCTGCCTTCCTGGGGCAAGTCCCTGATGTCAGAGGACTTCCAGCTACTATGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CAA 72 bp | CTGCTGTCTTCATGGCTGAACAGAAGCTGGCCTTCGTaGAGCAGTTGGAATATGAGACCGCCATCCATGTCA | + |
Preference number: 6 (lower is better) Translates to: LLSSWLNRSWPS*SSWNMRPPSMS Trigger: TGACATGGATGGCGGTCTCATATTCCAACTGCTCAACGAAGGCCAGCTTCTGTTCAGCCATGAAGACAGCAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS GCA 72 bp | TGCATAGTAGCTGGAAGTCCTCTGACATCAGGGACTTaGCCCAGGAAGGCAGGGTGTTTCCATCAGTATTTT | + |
Preference number: 6 (lower is better) Translates to: CIVAGSPLTSGT*PRKAGCFHQYF Trigger: AAAATACTGATGGAAACACCCTGCCTTCCTGGGGCAAGTCCCTGATGTCAGAGGACTTCCAGCTACTATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CAA 90 bp | CCGGACTGGCACCGCTCGGACTGTAGCATCTTTGAAAAGCAGGTCTaGGCTGTGATATTTGGAGGAGTCAAACATTTGGAAACCGTTCTT | + |
Preference number: 6 (lower is better) Translates to: PDWHRSDCSIFEKQV*AVIFGGVKHLETVL Trigger: AAGAACGGTTTCCAAATGTTTGACTCCTCCAAATATCACAGCCAAGACCTGCTTTTCAAAGATGCTACAGTCCGAGCGGTGCCAGTCCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CCA 72 bp | TTGGAGGAGTCAAACATTTGGAAACCGTTCTTGTTATaGTCGTCTCCAAACAGGTCCTGGGCCTTGTCCAGA | + |
Preference number: 6 (lower is better) Translates to: LEESNIWKPFLL*SSPNRSWALSR Trigger: TCTGGACAAGGCCCAGGACCTGTTTGGAGACGACCATAACAAGAACGGTTTCCAAATGTTTGACTCCTCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CAA 90 bp | TTTGAAAAGCAGGTCTTGGCTGTGATATTTGGAGGAGTCAAACATTaGGAAACCGTTCTTGTTATGGTCGTCTCCAAACAGGTCCTGGGC | + |
Preference number: 6 (lower is better) Translates to: FEKQVLAVIFGGVKH*ETVLVMVVSKQVLG Trigger: GCCCAGGACCTGTTTGGAGACGACCATAACAAGAACGGTTTCCAAATGTTTGACTCCTCCAAATATCACAGCCAAGACCTGCTTTTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CAA 72 bp | CACCGCTCGGACTGTAGCATCTTTGAAAAGCAGGTCTaGGCTGTGATATTTGGAGGAGTCAAACATTTGGAA | + |
Preference number: 6 (lower is better) Translates to: HRSDCSIFEKQV*AVIFGGVKHLE Trigger: TTCCAAATGTTTGACTCCTCCAAATATCACAGCCAAGACCTGCTTTTCAAAGATGCTACAGTCCGAGCGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |
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CDS CAA 72 bp | CAGGTCTTGGCTGTGATATTTGGAGGAGTCAAACATTaGGAAACCGTTCTTGTTATGGTCGTCTCCAAACAG | + |
Preference number: 6 (lower is better) Translates to: QVLAVIFGGVKH*ETVLVMVVSKQ Trigger: CTGTTTGGAGACGACCATAACAAGAACGGTTTCCAAATGTTTGACTCCTCCAAATATCACAGCCAAGACCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023464.6 |