Pregenerated sensors for MELK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035683Ensembl transcript IDs: ENSMUST00000045607.12, ENSMUST00000125708.2, ENSMUST00000137703.8
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAAGTAACATTTCATGGGGCCTGCAGTTCGGATACTTATCATTGTTaGCTGGACATACTTACTGAAGTCAATACGCTTTTATTCCACATA | + |
|
Preference number: 1 (lower is better) Translates to: KVTFHGACSSDTYHC*LDILTEVNTLLFHI Trigger: TATGTGGAATAAAAGCGTATTGACTTCAGTAAGTATGTCCAGTCAACAATGATAAGTATCCGAACTGCAGGCCCCATGAAATGTTACTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| 3UTR-3UTR CCA 90 bp | AGTCACAGTGAAGAGCTGGCATCCCCTGATGGAAGTGAATATAAAAACAGTTACCCAATGGCCCCCAAATaGAACCAATCTCACAGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: SHSEELASPDGSEYKNSYPMAPK*NQSHSL Trigger: AAGACTGTGAGATTGGTTCCATTTGGGGGCCATTGG...GTAACTGTTTTTATATTCACTTCCATCAGGGGATGCCAGCTCTTCACTGTGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| 3UTR-3UTR TCA 90 bp | CAGATAAAACACACTCCAAATAGTCTCTACTTAACAGTCAGGAAGCCATTCGAGAACTGTACATCAAAATaGGTCACAGTGAAGAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: QIKHTPNSLYLTVRKPFENCTSK*VTVKSW Trigger: CCAGCTCTTCACTGTGACTCATTTTGATGTACAGTT...CTCGAATGGCTTCCTGACTGTTAAGTAGAGACTATTTGGAGTGTGTTTTATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| 3UTR-3UTR CCA 90 bp | CAGATAAAACACACTCCAAATAGTCTCTACTTAACAGTCAGGAAGCCATTCGAGACAGAACAGTTGCCTTaGATTCAGCCACAAAGTAAA | + |
|
Preference number: 2 (lower is better) Translates to: QIKHTPNSLYLTVRKPFETEQLP*IQPQSK Trigger: TTTACTTTGTGGCTGAATCCAAGGCAACTGTTCTGT...CTCGAATGGCTTCCTGACTGTTAAGTAGAGACTATTTGGAGTGTGTTTTATCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| 3UTR CCA 72 bp | ATGGGGCCTGCAGTTCGGATACTTATCATTGTTGACTaGACATACTTACTGAAGTCAATACGCTTTTATTCC | + |
|
Preference number: 3 (lower is better) Translates to: MGPAVRILIIVD*TYLLKSIRFYS Trigger: GGAATAAAAGCGTATTGACTTCAGTAAGTATGTCCAGTCAACAATGATAAGTATCCGAACTGCAGGCCCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| 3UTR TCA 72 bp | TTTCATGGGGCCTGCAGTTCGGATACTTATCATTGTTaGCTGGACATACTTACTGAAGTCAATACGCTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: FHGACSSDTYHC*LDILTEVNTLL Trigger: TAAAAGCGTATTGACTTCAGTAAGTATGTCCAGTCAACAATGATAAGTATCCGAACTGCAGGCCCCATGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS-3UTR CCA 90 bp | TCCTGTGTGCAACATCACACCCACATTCATCCGGGCAGACGGACACTGTCATCGTCTCCAGTGAGGACATaGCAGGCCAGTTTGACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SCVQHHTHIHPGRRTLSSSPVRT*QASLTF Trigger: AAAGGTCAAACTGGCCTGCCATGTCCTCACTGGAGA...CGATGACAGTGTCCGTCTGCCCGGATGAATGTGGGTGTGATGTTGCACACAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS-3UTR CCA 90 bp | TCCTGTGTGCAACATCACACCCACATTCATCCGGGCAGACGGACACTGTCATCGTCCTCCATGTGTGCCTaGTTGAGATCCACGTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: SCVQHHTHIHPGRRTLSSSSMCA*LRSTSI Trigger: AATGGACGTGGATCTCAACCAGGCACACATGGAGGA...CGATGACAGTGTCCGTCTGCCCGGATGAATGTGGGTGTGATGTTGCACACAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS-3UTR TCA 90 bp | AATGGCCCCCAAATGGAACCAATCTCACAGTCTTCCTGTGTGCAACATCACACCCATGGCAGGCCAGTTTaGCCTTTGCAAAGCCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: NGPQMEPISQSSCVQHHTHGRPV*PLQSHL Trigger: CAGGTGGCTTTGCAAAGGTCAAACTGGCCTGCCATG...GGTGTGATGTTGCACACAGGAAGACTGTGAGATTGGTTCCATTTGGGGGCCATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS-3UTR CCA 90 bp | TCCTGTGTGCAACATCACACCCACATTCATCCGGGCAGACGGACACTGTCATCGTTCTTGGTCCATCTCTaGCAGAGCCCTTCTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SCVQHHTHIHPGRRTLSSFLVHL*QSPSSC Trigger: ACAAGAAGAAGGGCTCTGCCAGAGATGGACCAAGAA...CGATGACAGTGTCCGTCTGCCCGGATGAATGTGGGTGTGATGTTGCACACAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS-3UTR GCA 90 bp | AATGGCCCCCAAATGGAACCAATCTCACAGTCTTCCTGTGTGCAACATCACACCCTGGGCTCTAGCTTTTaGAGGTGTTGGGAAACGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NGPQMEPISQSSCVQHHTLGSSF*RCWETG Trigger: ACCCGTTTCCCAACACCTGCAAAAGCTAGAGCCCAG...GGTGTGATGTTGCACACAGGAAGACTGTGAGATTGGTTCCATTTGGGGGCCATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS-3UTR TCA 90 bp | AGTCACAGTGAAGAGCTGGCATCCCCTGATGGAAGTGAATATAAAAACAGTTACGAAGGTAGGTGGCTGTaGGGTGATCGTACTGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: SHSEELASPDGSEYKNSYEGRWL*GDRTAT Trigger: CGTGGCAGTACGATCACCTCACAGCCACCTACCTTC...GTAACTGTTTTTATATTCACTTCCATCAGGGGATGCCAGCTCTTCACTGTGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS-3UTR GCA 90 bp | ATGGGGCCTGCAGTTCGGATACTTATCATTGTTGACTGGACATACTTACTGAAGCCTCCATTGTCTGCCTaGTGCTGCGGTGATGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: MGPAVRILIIVDWTYLLKPPLSA*CCGDVQ Trigger: CTGTACATCACCGCAGCAGCAGGCAGACAATGGAGG...CTTCAGTAAGTATGTCCAGTCAACAATGATAAGTATCCGAACTGCAGGCCCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS-3UTR TCA 90 bp | AGTCACAGTGAAGAGCTGGCATCCCCTGATGGAAGTGAATATAAAAACAGTTACCTACCATCTCTCCAGTaGGGACATGGCAGGCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SHSEELASPDGSEYKNSYLPSLQ*GHGRPV Trigger: AACTGGCCTGCCATGTCCTCACTGGAGAGATGGTAG...GTAACTGTTTTTATATTCACTTCCATCAGGGGATGCCAGCTCTTCACTGTGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS-3UTR TCA 90 bp | ATGGGGCCTGCAGTTCGGATACTTATCATTGTTGACTGGACATACTTACTGAAGCCAAACATCTGCCTCTaGTCCAAGGTACGACTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: MGPAVRILIIVDWTYLLKPNICL*SKVRLP Trigger: GGGAAGTCGTACCTTGGATCAGAGGCAGATGTTTGG...CTTCAGTAAGTATGTCCAGTCAACAATGATAAGTATCCGAACTGCAGGCCCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS-3UTR GCA 90 bp | AGTCACAGTGAAGAGCTGGCATCCCCTGATGGAAGTGAATATAAAAACAGTTACACAGGAGGATGCCCATaGTCCAAACATCTGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SHSEELASPDGSEYKNSYTGGCP*SKHLPL Trigger: CAGAGGCAGATGTTTGGAGCATGGGCATCCTCCTGT...GTAACTGTTTTTATATTCACTTCCATCAGGGGATGCCAGCTCTTCACTGTGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS-3UTR GCA 90 bp | ATGGGGCCTGCAGTTCGGATACTTATCATTGTTGACTGGACATACTTACTGAAGGCACATACAGGAGGATaGCCATGCTCCAAACATCTG | + |
|
Preference number: 4 (lower is better) Translates to: MGPAVRILIIVDWTYLLKAHTGG*PCSKHL Trigger: CAGATGTTTGGAGCATGGGCATCCTCCTGTATGTGC...CTTCAGTAAGTATGTCCAGTCAACAATGATAAGTATCCGAACTGCAGGCCCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS-3UTR TCA 90 bp | ATGGGGCCTGCAGTTCGGATACTTATCATTGTTGACTGGACATACTTACTGAAGGTAGAAATCCACACATaGGCACATACAGGAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: MGPAVRILIIVDWTYLLKVEIHT*AHTGGC Trigger: GCATCCTCCTGTATGTGCTCATGTGTGGATTTCTAC...CTTCAGTAAGTATGTCCAGTCAACAATGATAAGTATCCGAACTGCAGGCCCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS-3UTR CCA 90 bp | AACTCTGGTAACCACAGCTGTGACTTAGTTAACGATCTCAATAAATCCTACTTATCCCCCGGGCCTTCTTaGCTAGAAGCAGAAGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: NSGNHSCDLVNDLNKSYLSPGPS*LEAEGR Trigger: CCTACCTTCTGCTTCTAGCCAAGAAGGCCCGGGGGA...TAAGTAGGATTTATTGAGATCGTTAACTAAGTCACAGCTGTGGTTACCAGAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS-3UTR GCA 90 bp | CAGATAAAACACACTCCAAATAGTCTCTACTTAACAGTCAGGAAGCCATTCGAGTTCTTTGGGTCCACCTaGAACATCTGCTGGAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QIKHTPNSLYLTVRKPFEFFGST*NICWRS Trigger: GCTTCTCCAGCAGATGTTGCAGGTGGACCCAAAGAA...CTCGAATGGCTTCCTGACTGTTAAGTAGAGACTATTTGGAGTGTGTTTTATCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS-3UTR GCA 90 bp | AACTCTGGTAACCACAGCTGTGACTTAGTTAACGATCTCAATAAATCCTACTTAACCACGTCAGGTCTCTaGAGCTGGCACACTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NSGNHSCDLVNDLNKSYLTTSGL*SWHTSS Trigger: ACTGGAAGTGTGCCAGCTGCAGAGACCTGACGTGGT...TAAGTAGGATTTATTGAGATCGTTAACTAAGTCACAGCTGTGGTTACCAGAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS-3UTR CCA 90 bp | ATGGGGCCTGCAGTTCGGATACTTATCATTGTTGACTGGACATACTTACTGAAGAGAAATCCGTTTCTTTaGGTCCACCTGCAACATCTG | + |
|
Preference number: 4 (lower is better) Translates to: MGPAVRILIIVDWTYLLKRNPFL*VHLQHL Trigger: CAGATGTTGCAGGTGGACCCAAAGAAACGGATTTCT...CTTCAGTAAGTATGTCCAGTCAACAATGATAAGTATCCGAACTGCAGGCCCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS-3UTR TCA 90 bp | AACTCTGGTAACCACAGCTGTGACTTAGTTAACGATCTCAATAAATCCTACTTACAGGCTCAGATTCTTTaGCTTTGGAGTGGTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NSGNHSCDLVNDLNKSYLQAQIL*LWSGAG Trigger: GCCAGCACCACTCCAAAGTCAAAGAATCTGAGCCTG...TAAGTAGGATTTATTGAGATCGTTAACTAAGTCACAGCTGTGGTTACCAGAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS-3UTR GCA 90 bp | AACTCTGGTAACCACAGCTGTGACTTAGTTAACGATCTCAATAAATCCTACTTACCATTGTCTGCCTGCTaGTGCGGTGATGTACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: NSGNHSCDLVNDLNKSYLPLSAC*CGDVQK Trigger: TTTCTGTACATCACCGCAGCAGCAGGCAGACAATGG...TAAGTAGGATTTATTGAGATCGTTAACTAAGTCACAGCTGTGGTTACCAGAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS-3UTR CCA 90 bp | CAGATAAAACACACTCCAAATAGTCTCTACTTAACAGTCAGGAAGCCATTCGAGAGTCCTTGTTGCCCTTaGGTTTTGCACAAAGACCAA | + |
|
Preference number: 4 (lower is better) Translates to: QIKHTPNSLYLTVRKPFESPCCP*VLHKDQ Trigger: TTGGTCTTTGTGCAAAACCCAAGGGCAACAAGGACT...CTCGAATGGCTTCCTGACTGTTAAGTAGAGACTATTTGGAGTGTGTTTTATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS-3UTR CCA 90 bp | CAGATAAAACACACTCCAAATAGTCTCTACTTAACAGTCAGGAAGCCATTCGAGTGCATGACCCAGGGATaGTTCAGGAGATTTCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: QIKHTPNSLYLTVRKPFECMTQG*FRRFLI Trigger: TATGAGAAATCTCCTGAACCATCCCTGGGTCATGCA...CTCGAATGGCTTCCTGACTGTTAAGTAGAGACTATTTGGAGTGTGTTTTATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS-3UTR CCA 90 bp | ATGGGGCCTGCAGTTCGGATACTTATCATTGTTGACTGGACATACTTACTGAAGGTCCACGTTCTTCTTTaGAAGAATAGCCATGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: MGPAVRILIIVDWTYLLKVHVLL*KNSHDF Trigger: GAAATCATGGCTATTCTTCCAAAGAAGAACGTGGAC...CTTCAGTAAGTATGTCCAGTCAACAATGATAAGTATCCGAACTGCAGGCCCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS-3UTR CCA 90 bp | AACTCTGGTAACCACAGCTGTGACTTAGTTAACGATCTCAATAAATCCTACTTAGGCTCCCAAACACATTaGTTCCTTTCTTTTTCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NSGNHSCDLVNDLNKSYLGSQTH*FLSFSG Trigger: CCCCGAAAAAGAAAGGAACCAATGTGTTTGGGAGCC...TAAGTAGGATTTATTGAGATCGTTAACTAAGTCACAGCTGTGGTTACCAGAGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS-3UTR GCA 90 bp | AACTCTGGTAACCACAGCTGTGACTTAGTTAACGATCTCAATAAATCCTACTTAAGTTATCATCACTTGTaGTCATATCTTCCAGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NSGNHSCDLVNDLNKSYLSYHHL*SYLPGS Trigger: TGAGCCTGGAAGATATGAGCACAAGTGATGATAACT...TAAGTAGGATTTATTGAGATCGTTAACTAAGTCACAGCTGTGGTTACCAGAGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| 3UTR CAA 72 bp | GAAGTCAATACGCTTTTATTCCACATATTAAATGTGTaGTTTAACTCTGGTAACCACAGCTGTGACTTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: EVNTLLFHILNV*FNSGNHSCDLV Trigger: AACTAAGTCACAGCTGTGGTTACCAGAGTTAAACAACACATTTAATATGTGGAATAAAAGCGTATTGACTTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS CCA 90 bp | CCTGCGGAATTCCCTGGTGTTCTAACCGGGGCTTCTCTCAGGCACTaGGCTCTAGCTTTTGCAGGTGTTGGGAAACGGGTTGGTGAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: PAEFPGVLTGASLRH*ALAFAGVGKRVGEA Trigger: CGCCTCACCAACCCGTTTCCCAACACCTGCAAAAGCTAGAGCCCAGTGCCTGAGAGAAGCCCCGGTTAGAACACCAGGGAATTCCGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS GCA 90 bp | TTTGAGGTCCCTGTGGGCATAGCCCTGGCTGTGGACATACGCAACTaGAGACAGTATCTGACGGAAGACGACCCGGGTCTCCTCTTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: FEVPVGIALAVDIRN*RQYLTEDDPGLLFR Trigger: TCGGAAGAGGAGACCCGGGTCGTCTTCCGTCAGATACTGTCTGCAGTTGCGTATGTCCACAGCCAGGGCTATGCCCACAGGGACCTCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS GCA 90 bp | TCACCCTTCAGCCGCTGTCTCCGGATGCCTACCACGTCAGGTCTCTaGAGCTGGCACACTTCCAGTTCAAACTGCATTGTCACTTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SPFSRCLRMPTTSGL*SWHTSSSNCIVTLP Trigger: TGGCAAAGTGACAATGCAGTTTGAACTGGAAGTGTGCCAGCTGCAGAGACCTGACGTGGTAGGCATCCGGAGACAGCGGCTGAAGGGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS GCA 90 bp | ATCTCTTGTAAACCCAGGCATCACCCTTCAGCCGCTGTCTCCGGATaGCTACCACGTCAGGTCTCTGCAGCTGGCACACTTCCAGTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: ISCKPRHHPSAAVSG*LPRQVSAAGTLPVQ Trigger: TTGAACTGGAAGTGTGCCAGCTGCAGAGACCTGACGTGGTAGGCATCCGGAGACAGCGGCTGAAGGGTGATGCCTGGGTTTACAAGAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS-3UTR CAA 90 bp | TCCTGTGTGCAACATCACACCCACATTCATCCGGGCAGACGGACACTGTCATCGCAAAGGAGTCTTGCTTaGCCACTCCACGGGACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SCVQHHTHIHPGRRTLSSQRSLA*PLHGTA Trigger: AGCTGTCCCGTGGAGTGGCAAAGCAAGACTCCTTTG...CGATGACAGTGTCCGTCTGCCCGGATGAATGTGGGTGTGATGTTGCACACAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS-3UTR CAA 90 bp | TCCTGTGTGCAACATCACACCCACATTCATCCGGGCAGACGGACACTGTCATCGCCAGGCTCAGATTCTTaGACTTTGGAGTGGTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SCVQHHTHIHPGRRTLSSPGSDS*TLEWCW Trigger: CCAGCACCACTCCAAAGTCAAAGAATCTGAGCCTGG...CGATGACAGTGTCCGTCTGCCCGGATGAATGTGGGTGTGATGTTGCACACAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS-3UTR CAA 90 bp | TCCTGTGTGCAACATCACACCCACATTCATCCGGGCAGACGGACACTGTCATCGGCATCGATCTCAGTTTaGACTCGGGGCAAATCACTC | + |
|
Preference number: 5 (lower is better) Translates to: SCVQHHTHIHPGRRTLSSASISV*TRGKSL Trigger: GAGTGATTTGCCCCGAGTCAAAACTGAGATCGATGC...CGATGACAGTGTCCGTCTGCCCGGATGAATGTGGGTGTGATGTTGCACACAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS CCA 90 bp | CACCAGGCGAGTTGTAGTCACATTGTAGTGCAGCTTTCGCTTTCTTaGTCCATCTCTGGCAGAGCCCTTCTTCTTGTTCCTTGTGAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: HQASCSHIVVQLSLS*SISGRALLLVPCER Trigger: GCGCTCACAAGGAACAAGAAGAAGGGCTCTGCCAGAGATGGACCAAGAAAGCGAAAGCTGCACTACAATGTGACTACAACTCGCCTGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS GCA 90 bp | CGTACTGCCACGACGAAATTAAATCCTCCATTGTCTGCCTGCTGCTaGGGTGATGTACAGAAAGCTCTGTCACGCAATCCTCATCGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RTATTKLNPPLSACC*GDVQKALSRNPHRG Trigger: ACCTCGATGAGGATTGCGTGACAGAGCTTTCTGTACATCACCGCAGCAGCAGGCAGACAATGGAGGATTTAATTTCGTCGTGGCAGTACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS-3UTR CAA 90 bp | AATGGCCCCCAAATGGAACCAATCTCACAGTCTTCCTGTGTGCAACATCACACCGGGACAGCTGTAATCTaGCATGACCCAGGGATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: NGPQMEPISQSSCVQHHTGTAVI*HDPGMV Trigger: AACCATCCCTGGGTCATGCAAGATTACAGCTGTCCC...GGTGTGATGTTGCACACAGGAAGACTGTGAGATTGGTTCCATTTGGGGGCCATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS GCA 90 bp | GATCGTACTGCCACGACGAAATTAAATCCTCCATTGTCTGCCTGCTaGTGCGGTGATGTACAGAAAGCTCTGTCACGCAATCCTCATCGA | + |
|
Preference number: 5 (lower is better) Translates to: DRTATTKLNPPLSAC*CGDVQKALSRNPHR Trigger: TCGATGAGGATTGCGTGACAGAGCTTTCTGTACATCACCGCAGCAGCAGGCAGACAATGGAGGATTTAATTTCGTCGTGGCAGTACGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS GCA 90 bp | GGTGATCGTACTGCCACGACGAAATTAAATCCTCCATTGTCTGCCTaGTGCTGCGGTGATGTACAGAAAGCTCTGTCACGCAATCCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: GDRTATTKLNPPLSA*CCGDVQKALSRNPH Trigger: ATGAGGATTGCGTGACAGAGCTTTCTGTACATCACCGCAGCAGCAGGCAGACAATGGAGGATTTAATTTCGTCGTGGCAGTACGATCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS TCA 90 bp | CAGGCACTGGGCTCTAGCTTTTGCAGGTGTTGGGAAACGGGTTGGTaGGGCGGGTATTTCTCTCTTATACTGGTTCTTACTAACTGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: QALGSSFCRCWETGW*GGYFSLILVLTNWN Trigger: ATTCCAGTTAGTAAGAACCAGTATAAGAGAGAAATACCCGCCTCACCAACCCGTTTCCCAACACCTGCAAAAGCTAGAGCCCAGTGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS-3UTR CAA 90 bp | ATGGGGCCTGCAGTTCGGATACTTATCATTGTTGACTGGACATACTTACTGAAGGCAGCTTTCGCTTTCTaGGTCCATCTCTGGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: MGPAVRILIIVDWTYLLKAAFAF*VHLWQS Trigger: GCTCTGCCAGAGATGGACCAAGAAAGCGAAAGCTGC...CTTCAGTAAGTATGTCCAGTCAACAATGATAAGTATCCGAACTGCAGGCCCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS TCA 90 bp | ACAGTTATCATCACTTGTGCTCATATCTTCCAGGCTCAGATTCTTTaGCTTTGGAGTGGTGCTGGCGGTTCCACAAGAGAAGGACAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TVIITCAHIFQAQIL*LWSGAGGSTREGQE Trigger: CTCCTGTCCTTCTCTTGTGGAACCGCCAGCACCACTCCAAAGTCAAAGAATCTGAGCCTGGAAGATATGAGCACAAGTGATGATAACTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS-3UTR CAA 90 bp | AGTCACAGTGAAGAGCTGGCATCCCCTGATGGAAGTGAATATAAAAACAGTTACACATGGCAGGCCAGTTaGACCTTTGCAAAGCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: SHSEELASPDGSEYKNSYTWQAS*TFAKPP Trigger: AGGTGGCTTTGCAAAGGTCAAACTGGCCTGCCATGT...GTAACTGTTTTTATATTCACTTCCATCAGGGGATGCCAGCTCTTCACTGTGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS-3UTR CAA 90 bp | AATGGCCCCCAAATGGAACCAATCTCACAGTCTTCCTGTGTGCAACATCACACCTTCTTCACAGAAGACTaGGGAGTGCACACATTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NGPQMEPISQSSCVQHHTFFTED*GVHTFS Trigger: AGAAAATGTGTGCACTCCCAAGTCTTCTGTGAAGAA...GGTGTGATGTTGCACACAGGAAGACTGTGAGATTGGTTCCATTTGGGGGCCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS CCA 90 bp | TTCTTATCCATGATTTTTATAGCTACCATCTCTCCAGTGAGGACATaGCAGGCCAGTTTGACCTTTGCAAAGCCACCTGTCCCAATCGTT | + |
|
Preference number: 5 (lower is better) Translates to: FLSMIFIATISPVRT*QASLTFAKPPVPIV Trigger: AACGATTGGGACAGGTGGCTTTGCAAAGGTCAAACTGGCCTGCCATGTCCTCACTGGAGAGATGGTAGCTATAAAAATCATGGATAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045607.12 ENSMUST00000125708.2 ENSMUST00000137703.8 |
||
| CDS CCA 90 bp | GGTGTTGGGAAACGGGTTGGTGAGGCGGGTATTTCTCTCTTATACTaGTTCTTACTAACTGGAATCTTCGGCTCAGAAAATACAAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: GVGKRVGEAGISLLY*FLLTGIFGSENTNC Trigger: GCAGTTTGTATTTTCTGAGCCGAAGATTCCAGTTAGTAAGAACCAGTATAAGAGAGAAATACCCGCCTCACCAACCCGTTTCCCAACACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS-3UTR CAA 90 bp | AATGGCCCCCAAATGGAACCAATCTCACAGTCTTCCTGTGTGCAACATCACACCCCTCTCATTATCTTCTaGTACAAAGCCATGACATTA | + |
|
Preference number: 5 (lower is better) Translates to: NGPQMEPISQSSCVQHHTPLIIF*YKAMTL Trigger: TAATGTCATGGCTTTGTACAAGAAGATAATGAGAGG...GGTGTGATGTTGCACACAGGAAGACTGTGAGATTGGTTCCATTTGGGGGCCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS-3UTR CAA 90 bp | ATGGGGCCTGCAGTTCGGATACTTATCATTGTTGACTGGACATACTTACTGAAGCACAGTTATCATCACTaGTGCTCATATCTTCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: MGPAVRILIIVDWTYLLKHSYHH*CSYLPG Trigger: GCCTGGAAGATATGAGCACAAGTGATGATAACTGTG...CTTCAGTAAGTATGTCCAGTCAACAATGATAAGTATCCGAACTGCAGGCCCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS-3UTR CAA 90 bp | AACTCTGGTAACCACAGCTGTGACTTAGTTAACGATCTCAATAAATCCTACTTAGCAGAGCCCTTCTTCTaGTTCCTTGTGAGCGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: NSGNHSCDLVNDLNKSYLAEPFF*FLVSAV Trigger: CACTGCGCTCACAAGGAACAAGAAGAAGGGCTCTGC...TAAGTAGGATTTATTGAGATCGTTAACTAAGTCACAGCTGTGGTTACCAGAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS TCA 90 bp | TCAGCTTTAGCTTATGATTTTCATCAAATAATAAATTTTCTGGTTTaGGGTCCCTGTGGGCATAGCCCTGGCTGTGGACATACGCAACTG | + |
|
Preference number: 5 (lower is better) Translates to: SALAYDFHQIINFLV*GPCGHSPGCGHTQL Trigger: CAGTTGCGTATGTCCACAGCCAGGGCTATGCCCACAGGGACCTCAAACCAGAAAATTTATTATTTGATGAAAATCATAAGCTAAAGCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS GCA 90 bp | TACTGGTTCTTACTAACTGGAATCTTCGGCTCAGAAAATACAAACTaGTCTTCATTCTTCACAGAAGACTTGGGAGTGCACACATTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: YWFLLTGIFGSENTN*SSFFTEDLGVHTFS Trigger: AGAAAATGTGTGCACTCCCAAGTCTTCTGTGAAGAATGAAGAGCAGTTTGTATTTTCTGAGCCGAAGATTCCAGTTAGTAAGAACCAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS TCA 72 bp | CCCTGGCTGTGGACATACGCAACTGCAGACAGTATCTaGCGGAAGACGACCCGGGTCTCCTCTTCCGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: PWLWTYATADSI*RKTTRVSSSDR Trigger: CCTGTCGGAAGAGGAGACCCGGGTCGTCTTCCGTCAGATACTGTCTGCAGTTGCGTATGTCCACAGCCAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS GCA 72 bp | CCTGTGGGCATAGCCCTGGCTGTGGACATACGCAACTaGAGACAGTATCTGACGGAAGACGACCCGGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: PVGIALAVDIRN*RQYLTEDDPGL Trigger: GAGACCCGGGTCGTCTTCCGTCAGATACTGTCTGCAGTTGCGTATGTCCACAGCCAGGGCTATGCCCACAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS GCA 72 bp | AAACCCAGGCATCACCCTTCAGCCGCTGTCTCCGGATaGCTACCACGTCAGGTCTCTGCAGCTGGCACACTT | + |
|
Preference number: 6 (lower is better) Translates to: KPRHHPSAAVSG*LPRQVSAAGTL Trigger: AAGTGTGCCAGCTGCAGAGACCTGACGTGGTAGGCATCCGGAGACAGCGGCTGAAGGGTGATGCCTGGGTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS GCA 72 bp | AGCCGCTGTCTCCGGATGCCTACCACGTCAGGTCTCTaGAGCTGGCACACTTCCAGTTCAAACTGCATTGTC | + |
|
Preference number: 6 (lower is better) Translates to: SRCLRMPTTSGL*SWHTSSSNCIV Trigger: GACAATGCAGTTTGAACTGGAAGTGTGCCAGCTGCAGAGACCTGACGTGGTAGGCATCCGGAGACAGCGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS CCA 72 bp | TTCCCTGGTGTTCTAACCGGGGCTTCTCTCAGGCACTaGGCTCTAGCTTTTGCAGGTGTTGGGAAACGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: FPGVLTGASLRH*ALAFAGVGKRV Trigger: AACCCGTTTCCCAACACCTGCAAAAGCTAGAGCCCAGTGCCTGAGAGAAGCCCCGGTTAGAACACCAGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS CCA 72 bp | GTTCCTTTCTTTTTCGGGGTATCCTCCATGTGTGCCTaGTTGAGATCCACGTCCATTGAACGGCACCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: VPFFFGVSSMCA*LRSTSIERHLL Trigger: GAGGAGGTGCCGTTCAATGGACGTGGATCTCAACCAGGCACACATGGAGGATACCCCGAAAAAGAAAGGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS CAA 72 bp | GCTACCATCTCTCCAGTGAGGACATGGCAGGCCAGTTaGACCTTTGCAAAGCCACCTGTCCCAATCGTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: ATISPVRTWQAS*TFAKPPVPIVS Trigger: TGAAACGATTGGGACAGGTGGCTTTGCAAAGGTCAAACTGGCCTGCCATGTCCTCACTGGAGAGATGGTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045607.12 ENSMUST00000125708.2 ENSMUST00000137703.8 |
||
| CDS CAA 90 bp | TGCAGCTTTCGCTTTCTTGGTCCATCTCTGGCAGAGCCCTTCTTCTaGTTCCTTGTGAGCGCAGTGAGAACCTTATCCAGTCCTCTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: CSFRFLGPSLAEPFF*FLVSAVRTLSSPLS Trigger: TGAGAGAGGACTGGATAAGGTTCTCACTGCGCTCACAAGGAACAAGAAGAAGGGCTCTGCCAGAGATGGACCAAGAAAGCGAAAGCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS TCA 72 bp | GGGCCTTCTTGGCTAGAAGCAGAAGGTAGGTGGCTGTaGGGTGATCGTACTGCCACGACGAAATTAAATCCT | + |
|
Preference number: 6 (lower is better) Translates to: GPSWLEAEGRWL*GDRTATTKLNP Trigger: AGGATTTAATTTCGTCGTGGCAGTACGATCACCTCACAGCCACCTACCTTCTGCTTCTAGCCAAGAAGGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS GCA 72 bp | TCACGCAATCCTCATCGAGGTGAGTCAAAGGAGTCTTaGTTTGCCACTCCACGGGACAGCTGTAATCTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SRNPHRGESKES*FATPRDSCNLA Trigger: TGCAAGATTACAGCTGTCCCGTGGAGTGGCAAAGCAAGACTCCTTTGACTCACCTCGATGAGGATTGCGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS GCA 72 bp | ACTGCCACGACGAAATTAAATCCTCCATTGTCTGCCTaGTGCTGCGGTGATGTACAGAAAGCTCTGTCACGC | + |
|
Preference number: 6 (lower is better) Translates to: TATTKLNPPLSA*CCGDVQKALSR Trigger: GCGTGACAGAGCTTTCTGTACATCACCGCAGCAGCAGGCAGACAATGGAGGATTTAATTTCGTCGTGGCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS CAA 72 bp | GCAATCCTCATCGAGGTGAGTCAAAGGAGTCTTGCTTaGCCACTCCACGGGACAGCTGTAATCTTGCATGAC | + |
|
Preference number: 6 (lower is better) Translates to: AILIEVSQRSLA*PLHGTAVILHD Trigger: GTCATGCAAGATTACAGCTGTCCCGTGGAGTGGCAAAGCAAGACTCCTTTGACTCACCTCGATGAGGATTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS CAA 72 bp | CGCTTTCTTGGTCCATCTCTGGCAGAGCCCTTCTTCTaGTTCCTTGTGAGCGCAGTGAGAACCTTATCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: RFLGPSLAEPFF*FLVSAVRTLSS Trigger: ACTGGATAAGGTTCTCACTGCGCTCACAAGGAACAAGAAGAAGGGCTCTGCCAGAGATGGACCAAGAAAGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS GCA 72 bp | GCCACGACGAAATTAAATCCTCCATTGTCTGCCTGCTaGTGCGGTGATGTACAGAAAGCTCTGTCACGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: ATTKLNPPLSAC*CGDVQKALSRN Trigger: ATTGCGTGACAGAGCTTTCTGTACATCACCGCAGCAGCAGGCAGACAATGGAGGATTTAATTTCGTCGTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS GCA 72 bp | TATCTTCCAGGCTCAGATTCTTTGACTTTGGAGTGGTaGTGGCGGTTCCACAAGAGAAGGACAGGAGCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: YLPGSDSLTLEW*WRFHKRRTGAV Trigger: TACAGCTCCTGTCCTTCTCTTGTGGAACCGCCAGCACCACTCCAAAGTCAAAGAATCTGAGCCTGGAAGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS CCA 72 bp | TCATATCTTCCAGGCTCAGATTCTTTGACTTTGGAGTaGTGCTGGCGGTTCCACAAGAGAAGGACAGGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SYLPGSDSLTLE*CWRFHKRRTGA Trigger: AGCTCCTGTCCTTCTCTTGTGGAACCGCCAGCACCACTCCAAAGTCAAAGAATCTGAGCCTGGAAGATATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS CCA 72 bp | TTCTTTGGAAGAATAGCCATGATTTCGCTCAGGAGCTaGTCGGGGTTCACCAGGCGAGTTGTAGTCACATTG | + |
|
Preference number: 6 (lower is better) Translates to: FFGRIAMISLRS*SGFTRRVVVTL Trigger: CAATGTGACTACAACTCGCCTGGTGAACCCCGACCAGCTCCTGAGCGAAATCATGGCTATTCTTCCAAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS CAA 72 bp | AGTCTTGCTTTGCCACTCCACGGGACAGCTGTAATCTaGCATGACCCAGGGATGGTTCAGGAGATTTCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: SLALPLHGTAVI*HDPGMVQEISH Trigger: ATGAGAAATCTCCTGAACCATCCCTGGGTCATGCAAGATTACAGCTGTCCCGTGGAGTGGCAAAGCAAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS CAA 90 bp | AGTCAAAGGAGTCTTGCTTTGCCACTCCACGGGACAGCTGTAATCTaGCATGACCCAGGGATGGTTCAGGAGATTTCTCATAGAAATCCG | + |
|
Preference number: 6 (lower is better) Translates to: SQRSLALPLHGTAVI*HDPGMVQEISHRNP Trigger: CGGATTTCTATGAGAAATCTCCTGAACCATCCCTGGGTCATGCAAGATTACAGCTGTCCCGTGGAGTGGCAAAGCAAGACTCCTTTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS TCA 72 bp | GATGTCTCAGACTCTTCAGCGCATCGATCTCAGTTTTaGCTCGGGGCAAATCACTCCCTAGCGCATTCTTAT | + |
|
Preference number: 6 (lower is better) Translates to: DVSDSSAHRSQF*LGANHSLAHSY Trigger: ATAAGAATGCGCTAGGGAGTGATTTGCCCCGAGTCAAAACTGAGATCGATGCGCTGAAGAGTCTGAGACATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045607.12 ENSMUST00000125708.2 ENSMUST00000137703.8 |
||
| CDS TCA 72 bp | GGCTCTAGCTTTTGCAGGTGTTGGGAAACGGGTTGGTaGGGCGGGTATTTCTCTCTTATACTGGTTCTTACT | + |
|
Preference number: 6 (lower is better) Translates to: GSSFCRCWETGW*GGYFSLILVLT Trigger: AGTAAGAACCAGTATAAGAGAGAAATACCCGCCTCACCAACCCGTTTCCCAACACCTGCAAAAGCTAGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS TCA 72 bp | ATCACTTGTGCTCATATCTTCCAGGCTCAGATTCTTTaGCTTTGGAGTGGTGCTGGCGGTTCCACAAGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: ITCAHIFQAQIL*LWSGAGGSTRE Trigger: TTCTCTTGTGGAACCGCCAGCACCACTCCAAAGTCAAAGAATCTGAGCCTGGAAGATATGAGCACAAGTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS CCA 72 bp | ATGATTTTTATAGCTACCATCTCTCCAGTGAGGACATaGCAGGCCAGTTTGACCTTTGCAAAGCCACCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: MIFIATISPVRT*QASLTFAKPPV Trigger: GACAGGTGGCTTTGCAAAGGTCAAACTGGCCTGCCATGTCCTCACTGGAGAGATGGTAGCTATAAAAATCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045607.12 ENSMUST00000125708.2 ENSMUST00000137703.8 |
||
| CDS CCA 72 bp | CACAGCACGTCTGCAGATGGTAGTCCTTGTTGCCCTTaGGTTTTGCACAAAGACCAAAGTCAATCAGCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: HSTSADGSPCCP*VLHKDQSQSAL Trigger: TAAAGCTGATTGACTTTGGTCTTTGTGCAAAACCCAAGGGCAACAAGGACTACCATCTGCAGACGTGCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045607.12 ENSMUST00000137703.8 |
||
| CDS CCA 72 bp | AGTTGTAGTCACATTGTAGTGCAGCTTTCGCTTTCTTaGTCCATCTCTGGCAGAGCCCTTCTTCTTGTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SCSHIVVQLSLS*SISGRALLLVP Trigger: AGGAACAAGAAGAAGGGCTCTGCCAGAGATGGACCAAGAAAGCGAAAGCTGCACTACAATGTGACTACAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS CAA 90 bp | TGCTCTTCATTCTTCACAGAAGACTTGGGAGTGCACACATTTTCTTaGTCCATTAATTTATTTGCCACTGCTCTGCGTACCCCTGGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: CSSFFTEDLGVHTFS*SINLFATALRTPGA Trigger: AGCGCCAGGGGTACGCAGAGCAGTGGCAAATAAATTAATGGACAAAGAAAATGTGTGCACTCCCAAGTCTTCTGTGAAGAATGAAGAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS CCA 72 bp | AGTGTAACCTTTCTGTACGAAGTCCACGTTCTTCTTTaGAAGAATAGCCATGATTTCGCTCAGGAGCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SVTFLYEVHVLL*KNSHDFAQELV Trigger: GACCAGCTCCTGAGCGAAATCATGGCTATTCTTCCAAAGAAGAACGTGGACTTCGTACAGAAAGGTTACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS CAA 90 bp | ATTTTTATAGCTACCATCTCTCCAGTGAGGACATGGCAGGCCAGTTaGACCTTTGCAAAGCCACCTGTCCCAATCGTTTCATATAGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: IFIATISPVRTWQAS*TFAKPPVPIVSYSS Trigger: TGAACTATATGAAACGATTGGGACAGGTGGCTTTGCAAAGGTCAAACTGGCCTGCCATGTCCTCACTGGAGAGATGGTAGCTATAAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045607.12 ENSMUST00000125708.2 ENSMUST00000137703.8 |
||
| CDS CCA 72 bp | AAACGGGTTGGTGAGGCGGGTATTTCTCTCTTATACTaGTTCTTACTAACTGGAATCTTCGGCTCAGAAAAT | + |
|
Preference number: 6 (lower is better) Translates to: KRVGEAGISLLY*FLLTGIFGSEN Trigger: ATTTTCTGAGCCGAAGATTCCAGTTAGTAAGAACCAGTATAAGAGAGAAATACCCGCCTCACCAACCCGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS CAA 90 bp | CACACAATTCATAGTCTATCAATCCAGCCACACAGTTATCATCACTaGTGCTCATATCTTCCAGGCTCAGATTCTTTGACTTTGGAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: HTIHSLSIQPHSYHH*CSYLPGSDSLTLEW Trigger: CCACTCCAAAGTCAAAGAATCTGAGCCTGGAAGATATGAGCACAAGTGATGATAACTGTGTGGCTGGATTGATAGACTATGAATTGTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS CCA 72 bp | GGCGGGTATTTCTCTCTTATACTGGTTCTTACTAACTaGAATCTTCGGCTCAGAAAATACAAACTGCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GGYFSLILVLTN*NLRLRKYKLLF Trigger: GAAGAGCAGTTTGTATTTTCTGAGCCGAAGATTCCAGTTAGTAAGAACCAGTATAAGAGAGAAATACCCGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||
| CDS CAA 72 bp | CATAGTCTATCAATCCAGCCACACAGTTATCATCACTaGTGCTCATATCTTCCAGGCTCAGATTCTTTGACT | + |
|
Preference number: 6 (lower is better) Translates to: HSLSIQPHSYHH*CSYLPGSDSLT Trigger: AGTCAAAGAATCTGAGCCTGGAAGATATGAGCACAAGTGATGATAACTGTGTGGCTGGATTGATAGACTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045607.12 |
||