Pregenerated sensors for MEIS3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041420Ensembl transcript IDs: ENSMUST00000002495.18, ENSMUST00000176446.2, ENSMUST00000176506.8, ENSMUST00000177156.8, ENSMUST00000177540.8
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGAGGGCAGGAAGATGGAGGATTCTTCCAAACATTGGATCCAGGTaGCCCTTCTTCCTTGACCATCCTTGTCCAACCCCAGTCTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: QRAGRWRILPNIGSR*PFFLDHPCPTPVSS Trigger: AGAAGAGACTGGGGTTGGACAAGGATGGTCAAGGAAGAAGGGTCACCTGGATCCAATGTTTGGAAGAATCCTCCATCTTCCTGCCCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTCCTGGGTCGGGGCCCCAGCCACCATCTTCTTCAGACCTTGGCCCAGTTTTTTGGAGGTGAAGTCCTaGAGCCCAAGGACCAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: LSWVGAPATIFFRPWPSFLEVKS*SPRTSR Trigger: CCTGCTGGTCCTTGGGCTTCAGGACTTCACCTCCAA...AAAACTGGGCCAAGGTCTGAAGAAGATGGTGGCTGGGGCCCCGACCCAGGACAG 60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| 3UTR CAA 90 bp | CTGGGCAAAGGGGAGGGCAGAAGAAGGGTGCAGGACCTGGAGGCTTaGTCTTTGCCCTTGAGAGACCCTCAAGTGGGCTCTTGGTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: LGKGEGRRRVQDLEA*SLPLRDPQVGSWSS Trigger: TGAGGACCAAGAGCCCACTTGAGGGTCTCTCAAGGGCAAAGACAAAGCCTCCAGGTCCTGCACCCTTCTTCTGCCCTCCCCTTTGCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| 3UTR-3UTR TCA 90 bp | CAAAGGGGAGGGCAGAAGAAGGGTGCAGGACCTGGAGGCTTTGTCTTTGCCCTTCAGGGAGGTAGGCGTTaGATGGGGTGGGAGCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: QRGGQKKGAGPGGFVFALQGGRR*MGWELW Trigger: CCAAAGCTCCCACCCCATTCAACGCCTACCTCCCTG...AAGGGCAAAGACAAAGCCTCCAGGTCCTGCACCCTTCTTCTGCCCTCCCCTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGACCAGCAGGGACCAATTAGGTGCAAGGCTGGTGGTCACAGTCAGAGGCTGCAGGGAGGTAGGCGTTaGATGGGGTGGGAGCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: KDQQGPIRCKAGGHSQRLQGGRR*MGWELW Trigger: CCAAAGCTCCCACCCCATTCAACGCCTACCTCCCTG...CAGCCTCTGACTGTGACCACCAGCCTTGCACCTAATTGGTCCCTGCTGGTCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGCTTTGTCTTTGCCCTTGAGAGACCCTCAAGTGGGCTCTTGGTCCTCAAGCGTGGCTGAGTCTCTGTaGAGCCTGCCATGGGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: EALSLPLRDPQVGSWSSSVAESL*SLPWAG Trigger: GCCAGCCCATGGCAGGCTTCACAGAGACTCAGCCAC...GCTTGAGGACCAAGAGCCCACTTGAGGGTCTCTCAAGGGCAAAGACAAAGCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177156.8 |
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| 3UTR-3UTR TCA 90 bp | TTCTCTGTCCTGGGTCGGGGCCCCAGCCACCATCTTCTTCAGACCTTGGCCCAGCAGGTTCATCCCCATTaGTCCTGGTGTCCTGACTGT | + |
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Preference number: 2 (lower is better) Translates to: FSVLGRGPSHHLLQTLAQQVHPH*SWCPDC Trigger: ACAGTCAGGACACCAGGATCAATGGGGATGAACCTG...CTGGGCCAAGGTCTGAAGAAGATGGTGGCTGGGGCCCCGACCCAGGACAGAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000177156.8 |
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| 3UTR-3UTR GCA 90 bp | GAGACCCTCAAGTGGGCTCTTGGTCCTCAAGCTACTGGGGACCCCAGGGAGGTAAGGGCAGAAGAAGGGTaGAGGACCTGGAGGCTTTGT | + |
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Preference number: 2 (lower is better) Translates to: ETLKWALGPQATGDPREVRAEEG*RTWRLC Trigger: ACAAAGCCTCCAGGTCCTGCACCCTTCTTCTGCCCT...TACCTCCCTGGGGTCCCCAGTAGCTTGAGGACCAAGAGCCCACTTGAGGGTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| 3UTR-3UTR TCA 90 bp | TCTTCTTCAGACCTTGGCCCAGTTTTCTGCTTAGGTCCTGGGCAAAGGGGAGGGCAGGGAGGTAGGCGTTaGATGGGGTGGGAGCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: SSSDLGPVFCLGPGQRGGQGGRR*MGWELW Trigger: CCAAAGCTCCCACCCCATTCAACGCCTACCTCCCTG...CCCTCCCCTTTGCCCAGGACCTAAGCAGAAAACTGGGCCAAGGTCTGAAGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTCCTGGGTCGGGGCCCCAGCCACCATCTTCTTCAGACCTTGGCCCAGTTTTCTTTGTCTTTGCCCTTaGGAGACCCTCAAGTGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: LSWVGAPATIFFRPWPSFLCLCP*ETLKWA Trigger: AGCCCACTTGAGGGTCTCTCAAGGGCAAAGACAAAG...AAAACTGGGCCAAGGTCTGAAGAAGATGGTGGCTGGGGCCCCGACCCAGGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| 3UTR-3UTR TCA 90 bp | GGACCTGGAGGCTTTGTCTTTGCCCTTGAGAGACCCTCAAGTGGGCTCTTGGTCTGGGAGCTTTGGAGGTaGAGTCCTGAAGCCCAAGGA | + |
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Preference number: 2 (lower is better) Translates to: GPGGFVFALERPSSGLLVWELWR*SPEAQG Trigger: TCCTTGGGCTTCAGGACTTCACCTCCAAAGCTCCCA...GACCAAGAGCCCACTTGAGGGTCTCTCAAGGGCAAAGACAAAGCCTCCAGGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| 3UTR-3UTR TCA 90 bp | TGTCCTGACTGTCACTTGTGGCTGAGTCTCTGTGAAGCCTGCCATGGGCTGGCCCAGGTTCATCCCCATTaGTCCTGGTGTCCTGACTGT | + |
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Preference number: 2 (lower is better) Translates to: CPDCHLWLSLCEACHGLAQVHPH*SWCPDC Trigger: ACAGTCAGGACACCAGGATCAATGGGGATGAACCTG...GGCCAGCCCATGGCAGGCTTCACAGAGACTCAGCCACAAGTGACAGTCAGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176446.2 ENSMUST00000177156.8 |
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| 3UTR-3UTR GCA 90 bp | TGTCCTGACTGTCACTTGTGGCTGAGTCTCTGTGAAGCCTGCCATGGGCTGGCCTGGTCAATCATGGGCTaGACTATTCGTCTCCGGGCA | + |
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Preference number: 2 (lower is better) Translates to: CPDCHLWLSLCEACHGLAWSIMG*TIRLRA Trigger: TGCCCGGAGACGAATAGTGCAGCCCATGATTGACCA...GGCCAGCCCATGGCAGGCTTCACAGAGACTCAGCCACAAGTGACAGTCAGGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176446.2 ENSMUST00000177156.8 |
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| 3UTR-3UTR CCA 90 bp | GCAAAGGGGAGGGCAGAAGAAGGGTGCAGGACCTGGAGGCTTTGTCTTTGCCCTTTTCTGCTTAGGTCCTaGGCAAAGGGGAGGGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: AKGRAEEGCRTWRLCLCPFLLRS*AKGRAE Trigger: TTCTGCCCTCCCCTTTGCCCAGGACCTAAGCAGAAA...AGGGCAAAGACAAAGCCTCCAGGTCCTGCACCCTTCTTCTGCCCTCCCCTTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| 3UTR CAA 90 bp | GGTGGGGGAGGCAGAGGGCAGGAAGATGGAGGATTCTTCCAAACATaGGATCCAGGTGACCCTTCTTCCTTGACCATCCTTGTCCAACCC | + |
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Preference number: 2 (lower is better) Translates to: GGGGRGQEDGGFFQT*DPGDPSSLTILVQP Trigger: GGGTTGGACAAGGATGGTCAAGGAAGAAGGGTCACCTGGATCCAATGTTTGGAAGAATCCTCCATCTTCCTGCCCTCTGCCTCCCCCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| 3UTR-3UTR TCA 90 bp | AGAAGAAGGGTGCAGGACCTGGAGGCTTTGTCTTTGCCCTTGAGAGACCCTCAATTGGAGGTGAAGTCCTaGAGCCCAAGGACCAGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: RRRVQDLEALSLPLRDPQLEVKS*SPRTSR Trigger: CCTGCTGGTCCTTGGGCTTCAGGACTTCACCTCCAA...TTGAGGGTCTCTCAAGGGCAAAGACAAAGCCTCCAGGTCCTGCACCCTTCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| 3UTR-3UTR TCA 90 bp | CACTCTCCTTCTAAGTTCAGGTTCATCCCCATTGATCCTGGTGTCCTGACTGTCGTGGCTGAGTCTCTGTaGAGCCTGCCATGGGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: HSPSKFRFIPIDPGVLTVVAESL*SLPWAG Trigger: GCCAGCCCATGGCAGGCTTCACAGAGACTCAGCCAC...GACAGTCAGGACACCAGGATCAATGGGGATGAACCTGAACTTAGAAGGAGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176446.2 ENSMUST00000177156.8 |
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| 3UTR-3UTR TCA 90 bp | CAAACATTGGATCCAGGTGACCCTTCTTCCTTGACCATCCTTGTCCAACCCCAGTTGGAGGTGAAGTCCTaGAGCCCAAGGACCAGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: QTLDPGDPSSLTILVQPQLEVKS*SPRTSR Trigger: CCTGCTGGTCCTTGGGCTTCAGGACTTCACCTCCAA...CTGGGGTTGGACAAGGATGGTCAAGGAAGAAGGGTCACCTGGATCCAATGTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGCCACCATCTTCTTCAGACCTTGGCCCAGTTTTCTGCTTAGGTCCTGGGCACTTTGTCTTTGCCCTTaGGAGACCCTCAAGTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: PATIFFRPWPSFLLRSWALCLCP*ETLKWA Trigger: AGCCCACTTGAGGGTCTCTCAAGGGCAAAGACAAAG...TGCCCAGGACCTAAGCAGAAAACTGGGCCAAGGTCTGAAGAAGATGGTGGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| 3UTR-3UTR TCA 90 bp | AGACCTTGGCCCAGTTTTCTGCTTAGGTCCTGGGCAAAGGGGAGGGCAGAAGAACTTTGTCTTTGCCCTTaGGAGACCCTCAAGTGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: RPWPSFLLRSWAKGRAEELCLCP*ETLKWA Trigger: AGCCCACTTGAGGGTCTCTCAAGGGCAAAGACAAAG...TTCTTCTGCCCTCCCCTTTGCCCAGGACCTAAGCAGAAAACTGGGCCAAGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGATCCAGGTGACCCTTCTTCCTTGACCATCCTTGTCCAACCCCAGTCTCTTTGGGAGCTTTGGAGGTaGAGTCCTGAAGCCCAAGGA | + |
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Preference number: 2 (lower is better) Translates to: LDPGDPSSLTILVQPQSLWELWR*SPEAQG Trigger: TCCTTGGGCTTCAGGACTTCACCTCCAAAGCTCCCA...AAGAGACTGGGGTTGGACAAGGATGGTCAAGGAAGAAGGGTCACCTGGATCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| 3UTR-3UTR GCA 90 bp | GGCAGAGGGCAGGAAGATGGAGGATTCTTCCAAACATTGGATCCAGGTGACCCTTGGTCAATCATGGGCTaGACTATTCGTCTCCGGGCA | + |
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Preference number: 2 (lower is better) Translates to: GRGQEDGGFFQTLDPGDPWSIMG*TIRLRA Trigger: TGCCCGGAGACGAATAGTGCAGCCCATGATTGACCA...AGGGTCACCTGGATCCAATGTTTGGAAGAATCCTCCATCTTCCTGCCCTCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177156.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAGAGGGCAGGAAGATGGAGGATTCTTCCAAACATTGGATCCAGGTGACCCTTTTCTGCTTAGGTCCTaGGCAAAGGGGAGGGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: GRGQEDGGFFQTLDPGDPFLLRS*AKGRAE Trigger: TTCTGCCCTCCCCTTTGCCCAGGACCTAAGCAGAAA...AGGGTCACCTGGATCCAATGTTTGGAAGAATCCTCCATCTTCCTGCCCTCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| 3UTR CAA 90 bp | GATGGAGGATTCTTCCAAACATTGGATCCAGGTGACCCTTCTTCCTaGACCATCCTTGTCCAACCCCAGTCTCTTCTCTGTCCTGGGTCG | + |
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Preference number: 2 (lower is better) Translates to: DGGFFQTLDPGDPSS*TILVQPQSLLCPGS Trigger: CGACCCAGGACAGAGAAGAGACTGGGGTTGGACAAGGATGGTCAAGGAAGAAGGGTCACCTGGATCCAATGTTTGGAAGAATCCTCCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| 3UTR-3UTR TCA 90 bp | CACTCTCCTTCTAAGTTCAGGTTCATCCCCATTGATCCTGGTGTCCTGACTGTCACTGTCACTTGTGGCTaGGTCTCTGTGAAGCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: HSPSKFRFIPIDPGVLTVTVTCG*VSVKPA Trigger: GGCAGGCTTCACAGAGACTCAGCCACAAGTGACAGT...GACAGTCAGGACACCAGGATCAATGGGGATGAACCTGAACTTAGAAGGAGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176446.2 ENSMUST00000177156.8 |
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| 3UTR-3UTR GCA 90 bp | ATAGGTAATGCCACTCTCCTTCTAAGTTCAGGTTCATCCCCATTGATCCTGGTGAGTCTCTGTGAAGCCTaGCATGGGCTGGCCCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: IGNATLLLSSGSSPLILVSLCEA*HGLALR Trigger: CCTGAGGGCCAGCCCATGGCAGGCTTCACAGAGACT...CACCAGGATCAATGGGGATGAACCTGAACTTAGAAGGAGAGTGGCATTACCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176446.2 ENSMUST00000177156.8 |
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| 3UTR-3UTR CCA 90 bp | CACTCTCCTTCTAAGTTCAGGTTCATCCCCATTGATCCTGGTGTCCTGACTGTCAAGCCTGCCATGGGCTaGCCCTCAGGGTTGAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: HSPSKFRFIPIDPGVLTVKPAMG*PSGLKD Trigger: ATCTTTCAACCCTGAGGGCCAGCCCATGGCAGGCTT...GACAGTCAGGACACCAGGATCAATGGGGATGAACCTGAACTTAGAAGGAGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176446.2 ENSMUST00000177156.8 |
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| 3UTR-3UTR TCA 90 bp | GGATTCTTCCAAACATTGGATCCAGGTGACCCTTCTTCCTTGACCATCCTTGTCACTGTCACTTGTGGCTaGGTCTCTGTGAAGCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: GFFQTLDPGDPSSLTILVTVTCG*VSVKPA Trigger: GGCAGGCTTCACAGAGACTCAGCCACAAGTGACAGT...GACAAGGATGGTCAAGGAAGAAGGGTCACCTGGATCCAATGTTTGGAAGAATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177156.8 |
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| 3UTR-3UTR GCA 90 bp | GGATTCTTCCAAACATTGGATCCAGGTGACCCTTCTTCCTTGACCATCCTTGTCCTTGGCCCAGTTTTCTaGTTAGGTCCTGGGCAAAGG | + |
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Preference number: 2 (lower is better) Translates to: GFFQTLDPGDPSSLTILVLGPVF*LGPGQR Trigger: CCTTTGCCCAGGACCTAAGCAGAAAACTGGGCCAAG...GACAAGGATGGTCAAGGAAGAAGGGTCACCTGGATCCAATGTTTGGAAGAATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| 3UTR-3UTR CCA 90 bp | GATGGAGGATTCTTCCAAACATTGGATCCAGGTGACCCTTCTTCCTTGACCATCATCTTCTTCAGACCTTaGCCCAGTTTTCTGCTTAGG | + |
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Preference number: 2 (lower is better) Translates to: DGGFFQTLDPGDPSSLTIIFFRP*PSFLLR Trigger: CCTAAGCAGAAAACTGGGCCAAGGTCTGAAGAAGAT...GATGGTCAAGGAAGAAGGGTCACCTGGATCCAATGTTTGGAAGAATCCTCCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| 3UTR-3UTR CAA 90 bp | CTGTCCTGGGTCGGGGCCCCAGCCACCATCTTCTTCAGACCTTGGCCCAGTTTTCTGGAGGCTTTGTCTTaGCCCTTGAGAGACCCTCAA | + |
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Preference number: 3 (lower is better) Translates to: LSWVGAPATIFFRPWPSFLEALS*PLRDPQ Trigger: TTGAGGGTCTCTCAAGGGCAAAGACAAAGCCTCCAG...AAAACTGGGCCAAGGTCTGAAGAAGATGGTGGCTGGGGCCCCGACCCAGGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| 3UTR CCA 72 bp | TTGTCTTTGCCCTTGAGAGACCCTCAAGTGGGCTCTTaGTCCTCAAGCTACTGGGGACCCCAGGGAGGTAGG | + |
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Preference number: 3 (lower is better) Translates to: LSLPLRDPQVGS*SSSYWGPQGGR Trigger: CCTACCTCCCTGGGGTCCCCAGTAGCTTGAGGACCAAGAGCCCACTTGAGGGTCTCTCAAGGGCAAAGACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| 3UTR CCA 72 bp | CAATTAGGTGCAAGGCTGGTGGTCACAGTCAGAGGCTaGGGCCTTCCCACCTTCCCTTTGAACCCAGCCTCT | + |
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Preference number: 3 (lower is better) Translates to: QLGARLVVTVRG*GLPTFPLNPAS Trigger: AGAGGCTGGGTTCAAAGGGAAGGTGGGAAGGCCCCAGCCTCTGACTGTGACCACCAGCCTTGCACCTAATTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177156.8 |
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| 3UTR-3UTR CAA 90 bp | AAGGACCAGCAGGGACCAATTAGGTGCAAGGCTGGTGGTCACAGTCAGAGGCTGGCTTTGTCTTTGCCCTaGAGAGACCCTCAAGTGGGC | + |
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Preference number: 3 (lower is better) Translates to: KDQQGPIRCKAGGHSQRLALSLP*RDPQVG Trigger: GCCCACTTGAGGGTCTCTCAAGGGCAAAGACAAAGC...CAGCCTCTGACTGTGACCACCAGCCTTGCACCTAATTGGTCCCTGCTGGTCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| 3UTR-3UTR CAA 90 bp | AAGGACCAGCAGGGACCAATTAGGTGCAAGGCTGGTGGTCACAGTCAGAGGCTGCAGGACCTGGAGGCTTaGTCTTTGCCCTTGAGAGAC | + |
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Preference number: 3 (lower is better) Translates to: KDQQGPIRCKAGGHSQRLQDLEA*SLPLRD Trigger: GTCTCTCAAGGGCAAAGACAAAGCCTCCAGGTCCTG...CAGCCTCTGACTGTGACCACCAGCCTTGCACCTAATTGGTCCCTGCTGGTCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| 3UTR TCA 72 bp | GAAGGGTGCAGGACCTGGAGGCTTTGTCTTTGCCCTTaGGAGACCCTCAAGTGGGCTCTTGGTCCTCAAGCT | + |
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Preference number: 3 (lower is better) Translates to: EGCRTWRLCLCP*ETLKWALGPQA Trigger: AGCTTGAGGACCAAGAGCCCACTTGAGGGTCTCTCAAGGGCAAAGACAAAGCCTCCAGGTCCTGCACCCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| 3UTR-3UTR CAA 90 bp | AGACCTTGGCCCAGTTTTCTGCTTAGGTCCTGGGCAAAGGGGAGGGCAGAAGAAGCTTTGTCTTTGCCCTaGAGAGACCCTCAAGTGGGC | + |
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Preference number: 3 (lower is better) Translates to: RPWPSFLLRSWAKGRAEEALSLP*RDPQVG Trigger: GCCCACTTGAGGGTCTCTCAAGGGCAAAGACAAAGC...TTCTTCTGCCCTCCCCTTTGCCCAGGACCTAAGCAGAAAACTGGGCCAAGGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| 3UTR-3UTR CAA 90 bp | TCTTCTTCAGACCTTGGCCCAGTTTTCTGCTTAGGTCCTGGGCAAAGGGGAGGGGGTGACCCTTCTTCCTaGACCATCCTTGTCCAACCC | + |
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Preference number: 3 (lower is better) Translates to: SSSDLGPVFCLGPGQRGGGDPSS*TILVQP Trigger: GGGTTGGACAAGGATGGTCAAGGAAGAAGGGTCACC...CCCTCCCCTTTGCCCAGGACCTAAGCAGAAAACTGGGCCAAGGTCTGAAGAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| 3UTR-3UTR CAA 90 bp | CCACCATCTTCTTCAGACCTTGGCCCAGTTTTCTGCTTAGGTCCTGGGCAAAGGGCTTTGTCTTTGCCCTaGAGAGACCCTCAAGTGGGC | + |
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Preference number: 3 (lower is better) Translates to: PPSSSDLGPVFCLGPGQRALSLP*RDPQVG Trigger: GCCCACTTGAGGGTCTCTCAAGGGCAAAGACAAAGC...CCTTTGCCCAGGACCTAAGCAGAAAACTGGGCCAAGGTCTGAAGAAGATGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| 3UTR-3UTR CAA 90 bp | CACTCTCCTTCTAAGTTCAGGTTCATCCCCATTGATCCTGGTGTCCTGACTGTCCAGGCCCTCATGATGTaGGTGGCCACTTTGGGAAAG | + |
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Preference number: 3 (lower is better) Translates to: HSPSKFRFIPIDPGVLTVQALMM*VATLGK Trigger: CTTTCCCAAAGTGGCCACCAACATCATGAGGGCCTG...GACAGTCAGGACACCAGGATCAATGGGGATGAACCTGAACTTAGAAGGAGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176446.2 |
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| 3UTR-3UTR CAA 90 bp | TGCCACTCTCCTTCTAAGTTCAGGTTCATCCCCATTGATCCTGGTGTCCTGACTTGTCCTGACTGTCACTaGTGGCTGAGTCTCTGTGAA | + |
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Preference number: 3 (lower is better) Translates to: CHSPSKFRFIPIDPGVLTCPDCH*WLSLCE Trigger: TTCACAGAGACTCAGCCACAAGTGACAGTCAGGACA...AGTCAGGACACCAGGATCAATGGGGATGAACCTGAACTTAGAAGGAGAGTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176446.2 ENSMUST00000177156.8 |
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| CDS-3UTR TCA 90 bp | CCCCAGCCACCATCTTCTTCAGACCTTGGCCCAGTTTTCTGCTTAGGTCCTGGGGTCACCACCTGGGGGTaGACCCAGCCCAGCCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: PQPPSSSDLGPVFCLGPGVTTWG*TQPSRG Trigger: GCCTCGGCTGGGCTGGGTTCACCCCCAGGTGGTGAC...CCCAGGACCTAAGCAGAAAACTGGGCCAAGGTCTGAAGAAGATGGTGGCTGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| CDS-3UTR CCA 90 bp | GAGGCTTTGTCTTTGCCCTTGAGAGACCCTCAAGTGGGCTCTTGGTCCTCAAGCCTGGGGTGGCCGGTGTaGGGTGTAGGGCCCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: EALSLPLRDPQVGSWSSSLGWPV*GVGPRG Trigger: GCCCCTGGGCCCTACACCCCACACCGGCCACCCCAG...GCTTGAGGACCAAGAGCCCACTTGAGGGTCTCTCAAGGGCAAAGACAAAGCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
||
| CDS-3UTR CCA 90 bp | GGTGCAGGACCTGGAGGCTTTGTCTTTGCCCTTGAGAGACCCTCAAGTGGGCTCCCTGGAGCTTGGAGCTaGGGTGGCCGGTGTGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GAGPGGFVFALERPSSGLPGAWS*GGRCGV Trigger: CACCCCACACCGGCCACCCCAGCTCCAAGCTCCAGG...GAGCCCACTTGAGGGTCTCTCAAGGGCAAAGACAAAGCCTCCAGGTCCTGCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
||
| CDS-3UTR TCA 90 bp | GAGACCCTCAAGTGGGCTCTTGGTCCTCAAGCTACTGGGGACCCCAGGGAGGTAGTGGCTGAGTCTCTGTaGAGCCTGCCATGGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ETLKWALGPQATGDPREVVAESL*SLPWAG Trigger: GCCAGCCCATGGCAGGCTTCACAGAGACTCAGCCAC...TACCTCCCTGGGGTCCCCAGTAGCTTGAGGACCAAGAGCCCACTTGAGGGTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 |
||
| CDS-3UTR CCA 90 bp | CCCCAGCCACCATCTTCTTCAGACCTTGGCCCAGTTTTCTGCTTAGGTCCTGGGCCTGGAGCTTGGAGCTaGGGTGGCCGGTGTGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PQPPSSSDLGPVFCLGPGPGAWS*GGRCGV Trigger: CACCCCACACCGGCCACCCCAGCTCCAAGCTCCAGG...CCCAGGACCTAAGCAGAAAACTGGGCCAAGGTCTGAAGAAGATGGTGGCTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGAGGGCAGGAAGATGGAGGATTCTTCCAAACATTGGATCCAGGTGACCCTGTCACCACCTGGGGGTaGACCCAGCCCAGCCGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GRGQEDGGFFQTLDPGDPVTTWG*TQPSRG Trigger: GCCTCGGCTGGGCTGGGTTCACCCCCAGGTGGTGAC...AGGGTCACCTGGATCCAATGTTTGGAAGAATCCTCCATCTTCCTGCCCTCTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
||
| CDS-3UTR TCA 90 bp | CCACCATCTTCTTCAGACCTTGGCCCAGTTTTCTGCTTAGGTCCTGGGCAAAGGGTCACCACCTGGGGGTaGACCCAGCCCAGCCGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PPSSSDLGPVFCLGPGQRVTTWG*TQPSRG Trigger: GCCTCGGCTGGGCTGGGTTCACCCCCAGGTGGTGAC...CCTTTGCCCAGGACCTAAGCAGAAAACTGGGCCAAGGTCTGAAGAAGATGGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
||
| CDS-3UTR GCA 90 bp | CTCAAGTGGGCTCTTGGTCCTCAAGCTACTGGGGACCCCAGGGAGGTAGGCGTTGTCCTCATCCTCTCCTaGGGAGCTGGGAGAGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: LKWALGPQATGDPREVGVVLILS*GAGRGY Trigger: GTAGCCTCTCCCAGCTCCGCAGGAGAGGATGAGGAC...AACGCCTACCTCCCTGGGGTCCCCAGTAGCTTGAGGACCAAGAGCCCACTTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCCTGGGTCGGGGCCCCAGCCACCATCTTCTTCAGACCTTGGCCCAGTTTTCCTCTCCTGCGGAGCTaGGAGAGGCTACGCTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSWVGAPATIFFRPWPSFPLLRS*ERLRLC Trigger: ACACAAGCGTAGCCTCTCCCAGCTCCGCAGGAGAGG...AAAACTGGGCCAAGGTCTGAAGAAGATGGTGGCTGGGGCCCCGACCCAGGACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
||
| CDS-3UTR CCA 90 bp | TGTCCTGACTGTCACTTGTGGCTGAGTCTCTGTGAAGCCTGCCATGGGCTGGCCGTCCAGCCCATCTCCTaGGGCCAGGGGGAGACATGT | + |
|
Preference number: 4 (lower is better) Translates to: CPDCHLWLSLCEACHGLAVQPIS*GQGETC Trigger: ACATGTCTCCCCCTGGCCCCAGGAGATGGGCTGGAC...GGCCAGCCCATGGCAGGCTTCACAGAGACTCAGCCACAAGTGACAGTCAGGACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176446.2 |
||
| CDS-3UTR CCA 90 bp | GGCTTTGTCTTTGCCCTTGAGAGACCCTCAAGTGGGCTCTTGGTCCTCAAGCTACCTGGAGCTTGGAGCTaGGGTGGCCGGTGTGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GFVFALERPSSGLLVLKLPGAWS*GGRCGV Trigger: CACCCCACACCGGCCACCCCAGCTCCAAGCTCCAGG...TAGCTTGAGGACCAAGAGCCCACTTGAGGGTCTCTCAAGGGCAAAGACAAAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
||
| CDS-3UTR CCA 90 bp | GACCCTCAAGTGGGCTCTTGGTCCTCAAGCTACTGGGGACCCCAGGGAGGTAGGAAGCCTGCCATGGGCTaGCCCTCAGGGTTGAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: DPQVGSWSSSYWGPQGGRKPAMG*PSGLKD Trigger: ATCTTTCAACCCTGAGGGCCAGCCCATGGCAGGCTT...CCTACCTCCCTGGGGTCCCCAGTAGCTTGAGGACCAAGAGCCCACTTGAGGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 |
||
| CDS-3UTR TCA 90 bp | GACCCTCAAGTGGGCTCTTGGTCCTCAAGCTACTGGGGACCCCAGGGAGGTAGGCAGGTTCATCCCCATTaGTCCTGGTGTCCTGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: DPQVGSWSSSYWGPQGGRQVHPH*SWCPDC Trigger: ACAGTCAGGACACCAGGATCAATGGGGATGAACCTG...CCTACCTCCCTGGGGTCCCCAGTAGCTTGAGGACCAAGAGCCCACTTGAGGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 |
||
| CDS-3UTR GCA 90 bp | CCCCAGCCACCATCTTCTTCAGACCTTGGCCCAGTTTTCTGCTTAGGTCCTGGGGTCCTCATCCTCTCCTaGGGAGCTGGGAGAGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: PQPPSSSDLGPVFCLGPGVLILS*GAGRGY Trigger: GTAGCCTCTCCCAGCTCCGCAGGAGAGGATGAGGAC...CCCAGGACCTAAGCAGAAAACTGGGCCAAGGTCTGAAGAAGATGGTGGCTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGTGAAGTCCTGAAGCCCAAGGACCAGCAGGGACCAATTAGGTGCAAGGCTAGTCTCTGTGAAGCCTaGCATGGGCTGGCCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGEVLKPKDQQGPIRCKASLCEA*HGLALR Trigger: CCTGAGGGCCAGCCCATGGCAGGCTTCACAGAGACT...AGCCTTGCACCTAATTGGTCCCTGCTGGTCCTTGGGCTTCAGGACTTCACCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 |
||
| CDS-3UTR CCA 90 bp | GGGCAGAAGAAGGGTGCAGGACCTGGAGGCTTTGTCTTTGCCCTTGAGAGACCCCTGCCTCTGAAAAGCTaGCCAGGGCTGTCGTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GQKKGAGPGGFVFALERPLPLKS*PGLSCA Trigger: AGCACACGACAGCCCTGGCCAGCTTTTCAGAGGCAG...GGGTCTCTCAAGGGCAAAGACAAAGCCTCCAGGTCCTGCACCCTTCTTCTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
||
| CDS-3UTR CCA 90 bp | GATGGAGGATTCTTCCAAACATTGGATCCAGGTGACCCTTCTTCCTTGACCATCCTGGGGTGGCCGGTGTaGGGTGTAGGGCCCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: DGGFFQTLDPGDPSSLTILGWPV*GVGPRG Trigger: GCCCCTGGGCCCTACACCCCACACCGGCCACCCCAG...GATGGTCAAGGAAGAAGGGTCACCTGGATCCAATGTTTGGAAGAATCCTCCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGTGAAGTCCTGAAGCCCAAGGACCAGCAGGGACCAATTAGGTGCAAGGCTCCTCTCCTGCGGAGCTaGGAGAGGCTACGCTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GGEVLKPKDQQGPIRCKAPLLRS*ERLRLC Trigger: ACACAAGCGTAGCCTCTCCCAGCTCCGCAGGAGAGG...AGCCTTGCACCTAATTGGTCCCTGCTGGTCCTTGGGCTTCAGGACTTCACCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
||
| CDS-3UTR TCA 90 bp | CCAAGGACCAGCAGGGACCAATTAGGTGCAAGGCTGGTGGTCACAGTCAGAGGCACTGTCACTTGTGGCTaGGTCTCTGTGAAGCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PRTSRDQLGARLVVTVRGTVTCG*VSVKPA Trigger: GGCAGGCTTCACAGAGACTCAGCCACAAGTGACAGT...GCCTCTGACTGTGACCACCAGCCTTGCACCTAATTGGTCCCTGCTGGTCCTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 |
||
| CDS-3UTR GCA 90 bp | CCCTTGAGAGACCCTCAAGTGGGCTCTTGGTCCTCAAGCTACTGGGGACCCCAGCCTCAAGATCCTCCCTaGAACTACCATCCCGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLRDPQVGSWSSSYWGPQPQDPP*NYHPDP Trigger: AGGATCGGGATGGTAGTTGCAGGGAGGATCTTGAGG...CTGGGGTCCCCAGTAGCTTGAGGACCAAGAGCCCACTTGAGGGTCTCTCAAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| CDS-3UTR CCA 90 bp | TGTCCTGACTGTCACTTGTGGCTGAGTCTCTGTGAAGCCTGCCATGGGCTGGCCACCGGAGTACCTGGATaGCCTGGACCATCAGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CPDCHLWLSLCEACHGLATGVPG*PGPSGC Trigger: ACAACCTGATGGTCCAGGCCATCCAGGTACTCCGGT...GGCCAGCCCATGGCAGGCTTCACAGAGACTCAGCCACAAGTGACAGTCAGGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177156.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGTGAAGTCCTGAAGCCCAAGGACCAGCAGGGACCAATTAGGTGCAAGGCTTTGTCGCACAGGTCGTaGACCTTCTCCAGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GGEVLKPKDQQGPIRCKALSHRS*TFSSSS Trigger: GCTGGAGCTGGAGAAGGTCCACGACCTGTGCGACAA...AGCCTTGCACCTAATTGGTCCCTGCTGGTCCTTGGGCTTCAGGACTTCACCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002495.18 ENSMUST00000177156.8 |
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| CDS-3UTR CCA 90 bp | GGTGCAGGACCTGGAGGCTTTGTCTTTGCCCTTGAGAGACCCTCAAGTGGGCTCAAGCCTGCCATGGGCTaGCCCTCAGGGTTGAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GAGPGGFVFALERPSSGLKPAMG*PSGLKD Trigger: ATCTTTCAACCCTGAGGGCCAGCCCATGGCAGGCTT...GAGCCCACTTGAGGGTCTCTCAAGGGCAAAGACAAAGCCTCCAGGTCCTGCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 |
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| CDS-3UTR CCA 90 bp | CTCTGTCCTGGGTCGGGGCCCCAGCCACCATCTTCTTCAGACCTTGGCCCAGTTCAATCACCAGGTCTATaGGCATCTTCCCCTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LCPGSGPQPPSSSDLGPVQSPGL*ASSPSP Trigger: TGGAGAAGGGGAAGATGCCCATAGACCTGGTGATTG...AACTGGGCCAAGGTCTGAAGAAGATGGTGGCTGGGGCCCCGACCCAGGACAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176506.8 |
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| 3UTR CAA 72 bp | GGCAGAAGAAGGGTGCAGGACCTGGAGGCTTTGTCTTaGCCCTTGAGAGACCCTCAAGTGGGCTCTTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GRRRVQDLEALS*PLRDPQVGSWS Trigger: GGACCAAGAGCCCACTTGAGGGTCTCTCAAGGGCAAAGACAAAGCCTCCAGGTCCTGCACCCTTCTTCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
||
| CDS-3UTR TCA 90 bp | GACCCTCAAGTGGGCTCTTGGTCCTCAAGCTACTGGGGACCCCAGGGAGGTAGGCAGCAATATCCTCATTaGAGGAGTCAGAGGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: DPQVGSWSSSYWGPQGGRQQYPH*RSQRSR Trigger: TCTGCTCCTCTGACTCCTTCAATGAGGATATTGCTG...CCTACCTCCCTGGGGTCCCCAGTAGCTTGAGGACCAAGAGCCCACTTGAGGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| CDS-3UTR GCA 90 bp | GGCAGAGGGCAGGAAGATGGAGGATTCTTCCAAACATTGGATCCAGGTGACCCTGTCCTCATCCTCTCCTaGGGAGCTGGGAGAGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: GRGQEDGGFFQTLDPGDPVLILS*GAGRGY Trigger: GTAGCCTCTCCCAGCTCCGCAGGAGAGGATGAGGAC...AGGGTCACCTGGATCCAATGTTTGGAAGAATCCTCCATCTTCCTGCCCTCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| CDS-3UTR CCA 90 bp | CCAGCCACCATCTTCTTCAGACCTTGGCCCAGTTTTCTGCTTAGGTCCTGGGCACTGCCTCTGAAAAGCTaGCCAGGGCTGTCGTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PATIFFRPWPSFLLRSWALPLKS*PGLSCA Trigger: AGCACACGACAGCCCTGGCCAGCTTTTCAGAGGCAG...TGCCCAGGACCTAAGCAGAAAACTGGGCCAAGGTCTGAAGAAGATGGTGGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| CDS-3UTR CCA 90 bp | GGACCTGGAGGCTTTGTCTTTGCCCTTGAGAGACCCTCAAGTGGGCTCTTGGTCAGTACCTGGATGGCCTaGACCATCAGGTTGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GPGGFVFALERPSSGLLVSTWMA*TIRLSS Trigger: GCTGGACAACCTGATGGTCCAGGCCATCCAGGTACT...GACCAAGAGCCCACTTGAGGGTCTCTCAAGGGCAAAGACAAAGCCTCCAGGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| CDS-3UTR CCA 90 bp | CCCCAGCCACCATCTTCTTCAGACCTTGGCCCAGTTTTCTGCTTAGGTCCTGGGACCGGAGTACCTGGATaGCCTGGACCATCAGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PQPPSSSDLGPVFCLGPGTGVPG*PGPSGC Trigger: ACAACCTGATGGTCCAGGCCATCCAGGTACTCCGGT...CCCAGGACCTAAGCAGAAAACTGGGCCAAGGTCTGAAGAAGATGGTGGCTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
||
| CDS-3UTR CCA 90 bp | AAGGACCAGCAGGGACCAATTAGGTGCAAGGCTGGTGGTCACAGTCAGAGGCTGACCGGAGTACCTGGATaGCCTGGACCATCAGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KDQQGPIRCKAGGHSQRLTGVPG*PGPSGC Trigger: ACAACCTGATGGTCCAGGCCATCCAGGTACTCCGGT...CAGCCTCTGACTGTGACCACCAGCCTTGCACCTAATTGGTCCCTGCTGGTCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
||
| CDS-3UTR CCA 90 bp | GAGGCTTTGTCTTTGCCCTTGAGAGACCCTCAAGTGGGCTCTTGGTCCTCAAGCTTGTCGCACAGGTCGTaGACCTTCTCCAGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EALSLPLRDPQVGSWSSSLSHRS*TFSSSS Trigger: GCTGGAGCTGGAGAAGGTCCACGACCTGTGCGACAA...GCTTGAGGACCAAGAGCCCACTTGAGGGTCTCTCAAGGGCAAAGACAAAGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002495.18 ENSMUST00000177156.8 |
||
| 3UTR CAA 72 bp | AGAAGGGTGCAGGACCTGGAGGCTTTGTCTTTGCCCTaGAGAGACCCTCAAGTGGGCTCTTGGTCCTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RRVQDLEALSLP*RDPQVGSWSSS Trigger: GCTTGAGGACCAAGAGCCCACTTGAGGGTCTCTCAAGGGCAAAGACAAAGCCTCCAGGTCCTGCACCCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
||
| CDS-3UTR TCA 90 bp | GAGGCTTTGTCTTTGCCCTTGAGAGACCCTCAAGTGGGCTCTTGGTCCTCAAGCACTGTCACTTGTGGCTaGGTCTCTGTGAAGCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: EALSLPLRDPQVGSWSSSTVTCG*VSVKPA Trigger: GGCAGGCTTCACAGAGACTCAGCCACAAGTGACAGT...GCTTGAGGACCAAGAGCCCACTTGAGGGTCTCTCAAGGGCAAAGACAAAGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 |
||
| CDS-3UTR TCA 90 bp | GACCTGGAGGCTTTGTCTTTGCCCTTGAGAGACCCTCAAGTGGGCTCTTGGTCCCAGGTTCATCCCCATTaGTCCTGGTGTCCTGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: DLEALSLPLRDPQVGSWSQVHPH*SWCPDC Trigger: ACAGTCAGGACACCAGGATCAATGGGGATGAACCTG...GGACCAAGAGCCCACTTGAGGGTCTCTCAAGGGCAAAGACAAAGCCTCCAGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 |
||
| CDS-3UTR GCA 90 bp | GGTGCAGGACCTGGAGGCTTTGTCTTTGCCCTTGAGAGACCCTCAAGTGGGCTCCTCTCGGAGCGGATCTaGTTAGCAAAGGCAGCAATA | + |
|
Preference number: 4 (lower is better) Translates to: GAGPGGFVFALERPSSGLLSERI*LAKAAI Trigger: TATTGCTGCCTTTGCTAAGCAGATCCGCTCCGAGAG...GAGCCCACTTGAGGGTCTCTCAAGGGCAAAGACAAAGCCTCCAGGTCCTGCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
||
| CDS-3UTR GCA 90 bp | AAGGACCAGCAGGGACCAATTAGGTGCAAGGCTGGTGGTCACAGTCAGAGGCTGTGGTCAATCATGGGCTaGACTATTCGTCTCCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KDQQGPIRCKAGGHSQRLWSIMG*TIRLRA Trigger: TGCCCGGAGACGAATAGTGCAGCCCATGATTGACCA...CAGCCTCTGACTGTGACCACCAGCCTTGCACCTAATTGGTCCCTGCTGGTCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGGGGAGGGCAGAAGAAGGGTGCAGGACCTGGAGGCTTTGTCTTTGCCCTTTGGTCAATCATGGGCTaGACTATTCGTCTCCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QRGGQKKGAGPGGFVFALWSIMG*TIRLRA Trigger: TGCCCGGAGACGAATAGTGCAGCCCATGATTGACCA...AAGGGCAAAGACAAAGCCTCCAGGTCCTGCACCCTTCTTCTGCCCTCCCCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 |
||
| CDS-3UTR GCA 90 bp | CAAACATTGGATCCAGGTGACCCTTCTTCCTTGACCATCCTTGTCCAACCCCAGAGTCTCTGTGAAGCCTaGCATGGGCTGGCCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QTLDPGDPSSLTILVQPQSLCEA*HGLALR Trigger: CCTGAGGGCCAGCCCATGGCAGGCTTCACAGAGACT...CTGGGGTTGGACAAGGATGGTCAAGGAAGAAGGGTCACCTGGATCCAATGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 |
||
| CDS-3UTR CCA 90 bp | GAGGCTTTGTCTTTGCCCTTGAGAGACCCTCAAGTGGGCTCTTGGTCCTCAAGCAGTACCTGGATGGCCTaGACCATCAGGTTGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EALSLPLRDPQVGSWSSSSTWMA*TIRLSS Trigger: GCTGGACAACCTGATGGTCCAGGCCATCCAGGTACT...GCTTGAGGACCAAGAGCCCACTTGAGGGTCTCTCAAGGGCAAAGACAAAGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
||
| CDS-3UTR CCA 90 bp | TTGGATCCAGGTGACCCTTCTTCCTTGACCATCCTTGTCCAACCCCAGTCTCTTCCTCTCCTGCGGAGCTaGGAGAGGCTACGCTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LDPGDPSSLTILVQPQSLPLLRS*ERLRLC Trigger: ACACAAGCGTAGCCTCTCCCAGCTCCGCAGGAGAGG...AAGAGACTGGGGTTGGACAAGGATGGTCAAGGAAGAAGGGTCACCTGGATCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
||
| CDS-3UTR TCA 90 bp | GGATTCTTCCAAACATTGGATCCAGGTGACCCTTCTTCCTTGACCATCCTTGTCGTGGCTGAGTCTCTGTaGAGCCTGCCATGGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GFFQTLDPGDPSSLTILVVAESL*SLPWAG Trigger: GCCAGCCCATGGCAGGCTTCACAGAGACTCAGCCAC...GACAAGGATGGTCAAGGAAGAAGGGTCACCTGGATCCAATGTTTGGAAGAATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 |
||
| CDS-3UTR GCA 90 bp | CCCCAGCCACCATCTTCTTCAGACCTTGGCCCAGTTTTCTGCTTAGGTCCTGGGCTCTCGGAGCGGATCTaGTTAGCAAAGGCAGCAATA | + |
|
Preference number: 4 (lower is better) Translates to: PQPPSSSDLGPVFCLGPGLSERI*LAKAAI Trigger: TATTGCTGCCTTTGCTAAGCAGATCCGCTCCGAGAG...CCCAGGACCTAAGCAGAAAACTGGGCCAAGGTCTGAAGAAGATGGTGGCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
||
| CDS-3UTR CCA 90 bp | TTGGATCCAGGTGACCCTTCTTCCTTGACCATCCTTGTCCAACCCCAGTCTCTTCTGCCTCTGAAAAGCTaGCCAGGGCTGTCGTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LDPGDPSSLTILVQPQSLLPLKS*PGLSCA Trigger: AGCACACGACAGCCCTGGCCAGCTTTTCAGAGGCAG...AAGAGACTGGGGTTGGACAAGGATGGTCAAGGAAGAAGGGTCACCTGGATCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
||
| CDS-3UTR GCA 90 bp | AGACCTTGGCCCAGTTTTCTGCTTAGGTCCTGGGCAAAGGGGAGGGCAGAAGAACTCTCGGAGCGGATCTaGTTAGCAAAGGCAGCAATA | + |
|
Preference number: 4 (lower is better) Translates to: RPWPSFLLRSWAKGRAEELSERI*LAKAAI Trigger: TATTGCTGCCTTTGCTAAGCAGATCCGCTCCGAGAG...TTCTTCTGCCCTCCCCTTTGCCCAGGACCTAAGCAGAAAACTGGGCCAAGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| CDS-3UTR GCA 90 bp | GGCTTTGTCTTTGCCCTTGAGAGACCCTCAAGTGGGCTCTTGGTCCTCAAGCTACCTCAAGATCCTCCCTaGAACTACCATCCCGATCCT | + |
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Preference number: 4 (lower is better) Translates to: GFVFALERPSSGLLVLKLPQDPP*NYHPDP Trigger: AGGATCGGGATGGTAGTTGCAGGGAGGATCTTGAGG...TAGCTTGAGGACCAAGAGCCCACTTGAGGGTCTCTCAAGGGCAAAGACAAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| CDS-3UTR CCA 90 bp | GAGGCTTTGTCTTTGCCCTTGAGAGACCCTCAAGTGGGCTCTTGGTCCTCAAGCGACCCACTGTCCTCATaGTCTCTGATCCATGTAGTA | + |
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Preference number: 4 (lower is better) Translates to: EALSLPLRDPQVGSWSSSDPLSS*SLIHVV Trigger: TACTACATGGATCAGAGACCATGAGGACAGTGGGTC...GCTTGAGGACCAAGAGCCCACTTGAGGGTCTCTCAAGGGCAAAGACAAAGCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| CDS-3UTR CCA 90 bp | ATAGGTAATGCCACTCTCCTTCTAAGTTCAGGTTCATCCCCATTGATCCTGGTGCCTCTCCTGCGGAGCTaGGAGAGGCTACGCTTGTGT | + |
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Preference number: 4 (lower is better) Translates to: IGNATLLLSSGSSPLILVPLLRS*ERLRLC Trigger: ACACAAGCGTAGCCTCTCCCAGCTCCGCAGGAGAGG...CACCAGGATCAATGGGGATGAACCTGAACTTAGAAGGAGAGTGGCATTACCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176446.2 ENSMUST00000177156.8 |
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| CDS-3UTR CCA 90 bp | GGCAGAGGGCAGGAAGATGGAGGATTCTTCCAAACATTGGATCCAGGTGACCCTGACCCACTGTCCTCATaGTCTCTGATCCATGTAGTA | + |
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Preference number: 4 (lower is better) Translates to: GRGQEDGGFFQTLDPGDPDPLSS*SLIHVV Trigger: TACTACATGGATCAGAGACCATGAGGACAGTGGGTC...AGGGTCACCTGGATCCAATGTTTGGAAGAATCCTCCATCTTCCTGCCCTCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| 3UTR CAA 72 bp | GGCAGAGGGCAGGAAGATGGAGGATTCTTCCAAACATaGGATCCAGGTGACCCTTCTTCCTTGACCATCCTT | + |
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Preference number: 4 (lower is better) Translates to: GRGQEDGGFFQT*DPGDPSSLTIL Trigger: AAGGATGGTCAAGGAAGAAGGGTCACCTGGATCCAATGTTTGGAAGAATCCTCCATCTTCCTGCCCTCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| CDS-3UTR TCA 90 bp | GCAGAGGGCAGGAAGATGGAGGATTCTTCCAAACATTGGATCCAGGTGACCCTTCAGCAATATCCTCATTaGAGGAGTCAGAGGAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: AEGRKMEDSSKHWIQVTLQQYPH*RSQRSR Trigger: TCTGCTCCTCTGACTCCTTCAATGAGGATATTGCTG...AAGGGTCACCTGGATCCAATGTTTGGAAGAATCCTCCATCTTCCTGCCCTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| CDS-3UTR CCA 90 bp | GCAGAGGGCAGGAAGATGGAGGATTCTTCCAAACATTGGATCCAGGTGACCCTTGACCCACTGTCCTCATaGTCTCTGATCCATGTAGTA | + |
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Preference number: 4 (lower is better) Translates to: AEGRKMEDSSKHWIQVTLDPLSS*SLIHVV Trigger: TACTACATGGATCAGAGACCATGAGGACAGTGGGTC...AAGGGTCACCTGGATCCAATGTTTGGAAGAATCCTCCATCTTCCTGCCCTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| 3UTR CAA 72 bp | TTCTTCCAAACATTGGATCCAGGTGACCCTTCTTCCTaGACCATCCTTGTCCAACCCCAGTCTCTTCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: FFQTLDPGDPSS*TILVQPQSLLC Trigger: ACAGAGAAGAGACTGGGGTTGGACAAGGATGGTCAAGGAAGAAGGGTCACCTGGATCCAATGTTTGGAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| CDS-3UTR CCA 90 bp | ATAGGTAATGCCACTCTCCTTCTAAGTTCAGGTTCATCCCCATTGATCCTGGTGGACCCACTGTCCTCATaGTCTCTGATCCATGTAGTA | + |
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Preference number: 4 (lower is better) Translates to: IGNATLLLSSGSSPLILVDPLSS*SLIHVV Trigger: TACTACATGGATCAGAGACCATGAGGACAGTGGGTC...CACCAGGATCAATGGGGATGAACCTGAACTTAGAAGGAGAGTGGCATTACCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176446.2 ENSMUST00000177156.8 |
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| CDS-3UTR CAA 90 bp | GGACCTGGAGGCTTTGTCTTTGCCCTTGAGAGACCCTCAAGTGGGCTCTTGGTCTTGTCCAGCTCCGGGTaGGAAGAGAACAGCGGCCTC | + |
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Preference number: 5 (lower is better) Translates to: GPGGFVFALERPSSGLLVLSSSG*EENSGL Trigger: GAGGCCGCTGTTCTCTTCCAACCCGGAGCTGGACAA...GACCAAGAGCCCACTTGAGGGTCTCTCAAGGGCAAAGACAAAGCCTCCAGGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| CDS-3UTR CAA 90 bp | CTCTGTCCTGGGTCGGGGCCCCAGCCACCATCTTCTTCAGACCTTGGCCCAGTTGCAGCAATATCCTCATaGAAGGAGTCAGAGGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: LCPGSGPQPPSSSDLGPVAAISS*KESEEQ Trigger: CTGCTCCTCTGACTCCTTCAATGAGGATATTGCTGC...AACTGGGCCAAGGTCTGAAGAAGATGGTGGCTGGGGCCCCGACCCAGGACAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| CDS-3UTR CAA 90 bp | AGACCTTGGCCCAGTTTTCTGCTTAGGTCCTGGGCAAAGGGGAGGGCAGAAGAATTGTCCAGCTCCGGGTaGGAAGAGAACAGCGGCCTC | + |
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Preference number: 5 (lower is better) Translates to: RPWPSFLLRSWAKGRAEELSSSG*EENSGL Trigger: GAGGCCGCTGTTCTCTTCCAACCCGGAGCTGGACAA...TTCTTCTGCCCTCCCCTTTGCCCAGGACCTAAGCAGAAAACTGGGCCAAGGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| CDS-3UTR CAA 90 bp | CCAGCCACCATCTTCTTCAGACCTTGGCCCAGTTTTCTGCTTAGGTCCTGGGCACAGGCCCTCATGATGTaGGTGGCCACTTTGGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: PATIFFRPWPSFLLRSWAQALMM*VATLGK Trigger: CTTTCCCAAAGTGGCCACCAACATCATGAGGGCCTG...TGCCCAGGACCTAAGCAGAAAACTGGGCCAAGGTCTGAAGAAGATGGTGGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| CDS-3UTR CAA 90 bp | AAGGGTGCAGGACCTGGAGGCTTTGTCTTTGCCCTTGAGAGACCCTCAAGTGGGGCAGCAATATCCTCATaGAAGGAGTCAGAGGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: KGAGPGGFVFALERPSSGAAISS*KESEEQ Trigger: CTGCTCCTCTGACTCCTTCAATGAGGATATTGCTGC...CCCACTTGAGGGTCTCTCAAGGGCAAAGACAAAGCCTCCAGGTCCTGCACCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| CDS-3UTR CAA 90 bp | GTGCAGGACCTGGAGGCTTTGTCTTTGCCCTTGAGAGACCCTCAAGTGGGCTCTGCAGCAATATCCTCATaGAAGGAGTCAGAGGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: VQDLEALSLPLRDPQVGSAAISS*KESEEQ Trigger: CTGCTCCTCTGACTCCTTCAATGAGGATATTGCTGC...AGAGCCCACTTGAGGGTCTCTCAAGGGCAAAGACAAAGCCTCCAGGTCCTGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| CDS-3UTR CAA 90 bp | AAGGACCAGCAGGGACCAATTAGGTGCAAGGCTGGTGGTCACAGTCAGAGGCTGTGTCCTGACTGTCACTaGTGGCTGAGTCTCTGTGAA | + |
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Preference number: 5 (lower is better) Translates to: KDQQGPIRCKAGGHSQRLCPDCH*WLSLCE Trigger: TTCACAGAGACTCAGCCACAAGTGACAGTCAGGACA...CAGCCTCTGACTGTGACCACCAGCCTTGCACCTAATTGGTCCCTGCTGGTCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 |
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| CDS-3UTR CAA 90 bp | CAAACATTGGATCCAGGTGACCCTTCTTCCTTGACCATCCTTGTCCAACCCCAGCAGGCCCTCATGATGTaGGTGGCCACTTTGGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: QTLDPGDPSSLTILVQPQQALMM*VATLGK Trigger: CTTTCCCAAAGTGGCCACCAACATCATGAGGGCCTG...CTGGGGTTGGACAAGGATGGTCAAGGAAGAAGGGTCACCTGGATCCAATGTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| CDS-3UTR CAA 90 bp | GCAGAGGGCAGGAAGATGGAGGATTCTTCCAAACATTGGATCCAGGTGACCCTTCAGGCCCTCATGATGTaGGTGGCCACTTTGGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: AEGRKMEDSSKHWIQVTLQALMM*VATLGK Trigger: CTTTCCCAAAGTGGCCACCAACATCATGAGGGCCTG...AAGGGTCACCTGGATCCAATGTTTGGAAGAATCCTCCATCTTCCTGCCCTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 |
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| CDS-3UTR CAA 90 bp | CCAGCCACCATCTTCTTCAGACCTTGGCCCAGTTTTCTGCTTAGGTCCTGGGCATGTCCTGACTGTCACTaGTGGCTGAGTCTCTGTGAA | + |
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Preference number: 5 (lower is better) Translates to: PATIFFRPWPSFLLRSWACPDCH*WLSLCE Trigger: TTCACAGAGACTCAGCCACAAGTGACAGTCAGGACA...TGCCCAGGACCTAAGCAGAAAACTGGGCCAAGGTCTGAAGAAGATGGTGGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 |
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| CDS-3UTR CAA 90 bp | GGTAATGCCACTCTCCTTCTAAGTTCAGGTTCATCCCCATTGATCCTGGTGTCCGGGAGACATGTCCAGTaGGTGCTTGGTCACTTGAGT | + |
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Preference number: 5 (lower is better) Translates to: GNATLLLSSGSSPLILVSGRHVQ*VLGHLS Trigger: ACTCAAGTGACCAAGCACCAACTGGACATGTCTCCC...GGACACCAGGATCAATGGGGATGAACCTGAACTTAGAAGGAGAGTGGCATTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176446.2 |
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| CDS CAA 72 bp | TGGATGGCCTGGACCATCAGGTTGTCCAGCTCCGGGTaGGAAGAGAACAGCGGCCTCTCGGAGCGGATCTGC | + |
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Preference number: 6 (lower is better) Translates to: WMAWTIRLSSSG*EENSGLSERIC Trigger: GCAGATCCGCTCCGAGAGGCCGCTGTTCTCTTCCAACCCGGAGCTGGACAACCTGATGGTCCAGGCCATCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 ENSMUST00000177540.8 |
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| CDS CAA 90 bp | CGGAGTACCTGGATGGCCTGGACCATCAGGTTGTCCAGCTCCGGGTaGGAAGAGAACAGCGGCCTCTCGGAGCGGATCTGCTTAGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: RSTWMAWTIRLSSSG*EENSGLSERICLAK Trigger: CTTTGCTAAGCAGATCCGCTCCGAGAGGCCGCTGTTCTCTTCCAACCCGGAGCTGGACAACCTGATGGTCCAGGCCATCCAGGTACTCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 ENSMUST00000177540.8 |
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| CDS GCA 72 bp | GGGTTGGAAGAGAACAGCGGCCTCTCGGAGCGGATCTaGTTAGCAAAGGCAGCAATATCCTCATTGAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: GLEENSGLSERI*LAKAAISSLKE Trigger: CTCCTTCAATGAGGATATTGCTGCCTTTGCTAAGCAGATCCGCTCCGAGAGGCCGCTGTTCTCTTCCAACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002495.18 ENSMUST00000176506.8 ENSMUST00000177156.8 ENSMUST00000177540.8 |
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