Pregenerated sensors for MEIS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027210Ensembl transcript IDs: ENSMUST00000028639.13, ENSMUST00000074285.8, ENSMUST00000102538.11, ENSMUST00000110906.9, ENSMUST00000110907.8, ENSMUST00000110908.9
Found 418 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAGGGTGGGTAGGGGGTCCTCCGTGCATCACCATGGCTGGGTGGTaGGGATGGCTTGGCAAATATGAATGCATTGGGGGTCCATGTCTT | + |
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Preference number: 1 (lower is better) Translates to: PGWVGGPPCITMAGW*GWLGKYECIGGPCL Trigger: AAGACATGGACCCCCAATGCATTCATATTTGCCAAGCCATCCCCACCACCCAGCCATGGTGATGCACGGAGGACCCCCTACCCACCCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR TCA 90 bp | GGAGTCTTTCTCCAGAGGATCTTTGCATGGACAAAATTGTCTCGATaGGCCCGTCGCTTCACATTTGTGTTCTTGTCCCATTGGTCCTCT | + |
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Preference number: 1 (lower is better) Translates to: GVFLQRIFAWTKLSR*ARRFTFVFLSHWSS Trigger: AGAGGACCAATGGGACAAGAACACAAATGTGAAGCGACGGGCTCATCGAGACAATTTTGTCCATGCAAAGATCCTCTGGAGAAAGACTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR CCA 90 bp | TCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCATTaGCCCAACAGGTTTAAAATATACCACAGTCTCTTCTGGATAGTG | + |
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Preference number: 1 (lower is better) Translates to: SDKCPSRSAAWFFSH*PNRFKIYHSLFWIV Trigger: CACTATCCAGAAGAGACTGTGGTATATTTTAAACCTGTTGGGCCAATGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR GCA 90 bp | TGCTACAGTAGTTATAACTCTCGGAGTCTTTCTCCAGAGGATCTTTaGATGGACAAAATTGTCTCGATGAGCCCGTCGCTTCACATTTGT | + |
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Preference number: 1 (lower is better) Translates to: CYSSYNSRSLSPEDL*MDKIVSMSPSLHIC Trigger: ACAAATGTGAAGCGACGGGCTCATCGAGACAATTTTGTCCATGCAAAGATCCTCTGGAGAAAGACTCCGAGAGTTATAACTACTGTAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR-3UTR CCA 90 bp | GCCGCTGGAGTTAGTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATATAGTCATTCCAGGGTaGGTAGGGGGTCCTCCGTGC | + |
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Preference number: 2 (lower is better) Translates to: AAGVSDEVQTSVHLAPQHIVIPG*VGGPPC Trigger: GCACGGAGGACCCCCTACCCACCCTGGAATGACTAT...ATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATCACTAACTCCAGCGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR-3UTR GCA 90 bp | TGTGCGTTGAGGAAAGCTGCCCAACTTAAGATTGTTTTGTCCACAGCCAAGGCTGTAGGGGGTCCTCCGTaGATCACCATGGCTGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: CALRKAAQLKIVLSTAKAVGGPP*ITMAGW Trigger: CCACCCAGCCATGGTGATGCACGGAGGACCCCCTAC...AGCCTTGGCTGTGGACAAAACAATCTTAAGTTGGGCAGCTTTCCTCAACGCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR-3UTR CCA 90 bp | GCCGCTGGAGTTAGTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGCTGGGTGGTGGGGATaGCTTGGCAAATATGAATGC | + |
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Preference number: 2 (lower is better) Translates to: AAGVSDEVQTSVHLAPQHAGWWG*LGKYEC Trigger: GCATTCATATTTGCCAAGCCATCCCCACCACCCAGC...ATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATCACTAACTCCAGCGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR-3UTR CCA 90 bp | GTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCAGTGCATCACCATGGCTaGGTGGTGGGGATGGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: VMRFRQVSISLRSMVLFSVHHHG*VVGMAW Trigger: CCAAGCCATCCCCACCACCCAGCCATGGTGATGCAC...TGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR-3UTR CCA 90 bp | TGTGCGTTGAGGAAAGCTGCCCAACTTAAGATTGTTTTGTCCACAGCCAAGGCTCTCCGTGCATCACCATaGCTGGGTGGTGGGGATGGC | + |
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Preference number: 2 (lower is better) Translates to: CALRKAAQLKIVLSTAKALRASP*LGGGDG Trigger: GCCATCCCCACCACCCAGCCATGGTGATGCACGGAG...AGCCTTGGCTGTGGACAAAACAATCTTAAGTTGGGCAGCTTTCCTCAACGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR-3UTR GCA 90 bp | CAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCATTGGCCCAACAGGTTTCCCCTGGCATGCTCTaGAAACTTCCCCTTGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: QVSISLRSMVLFSLAQQVSPGML*KLPLAL Trigger: CAAGGCAAGGGGAAGTTTGCAGAGCATGCCAGGGGA...AACCTGTTGGGCCAATGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR-3UTR GCA 90 bp | ATGGACAAAATTGTCTCGATGAGCCCGTCGCTTCACATTTGTGTTCTTGTCCCAGTAGGGGGTCCTCCGTaGATCACCATGGCTGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: MDKIVSMSPSLHICVLVPVGGPP*ITMAGW Trigger: CCACCCAGCCATGGTGATGCACGGAGGACCCCCTAC...TGGGACAAGAACACAAATGTGAAGCGACGGGCTCATCGAGACAATTTTGTCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR-3UTR CCA 90 bp | TCGATGAGCCCGTCGCTTCACATTTGTGTTCTTGTCCCATTGGTCCTCTGTTGCATCACCATGGCTGGGTaGTGGGGATGGCTTGGCAAA | + |
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Preference number: 2 (lower is better) Translates to: SMSPSLHICVLVPLVLCCITMAG*WGWLGK Trigger: TTTGCCAAGCCATCCCCACCACCCAGCCATGGTGAT...GCAACAGAGGACCAATGGGACAAGAACACAAATGTGAAGCGACGGGCTCATCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR-3UTR TCA 90 bp | CAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCATTGGCCCAACAGGTTCCAAGGCTCAGAACTTaGAGAAGCCTTCGCTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: QVSISLRSMVLFSLAQQVPRLRT*RSLRSV Trigger: GACAGAGCGAAGGCTTCTTCAAGTTCTGAGCCTTGG...AACCTGTTGGGCCAATGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR-3UTR GCA 90 bp | TCTCCAGAGGATCTTTGCATGGACAAAATTGTCTCGATGAGCCCGTCGCTTCACCGTAGTCCCCTGGCATaGTCTGCAAACTTCCCCTTG | + |
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Preference number: 2 (lower is better) Translates to: SPEDLCMDKIVSMSPSLHRSPLA*SANFPL Trigger: CAAGGGGAAGTTTGCAGAGCATGCCAGGGGACTACG...GTGAAGCGACGGGCTCATCGAGACAATTTTGTCCATGCAAAGATCCTCTGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR-3UTR CCA 90 bp | GTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCAATCACCATGGCTGGGTaGTGGGGATGGCTTGGCAAA | + |
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Preference number: 2 (lower is better) Translates to: VMRFRQVSISLRSMVLFSITMAG*WGWLGK Trigger: TTTGCCAAGCCATCCCCACCACCCAGCCATGGTGAT...TGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR-3UTR CCA 90 bp | TTGAGGAAAGCTGCCCAACTTAAGATTGTTTTGTCCACAGCCAAGGCTCAGAACGTGCATCACCATGGCTaGGTGGTGGGGATGGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: LRKAAQLKIVLSTAKAQNVHHHG*VVGMAW Trigger: CCAAGCCATCCCCACCACCCAGCCATGGTGATGCAC...GTTCTGAGCCTTGGCTGTGGACAAAACAATCTTAAGTTGGGCAGCTTTCCTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR-3UTR TCA 90 bp | TTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCATTGGCCCAACCAAGGCTCAGAACTTaGAGAAGCCTTCGCTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: FRQVSISLRSMVLFSLAQPRLRT*RSLRSV Trigger: GACAGAGCGAAGGCTTCTTCAAGTTCTGAGCCTTGG...TTGGGCCAATGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGGATCTTTGCATGGACAAAATTGTCTCGATGAGCCCGTCGCTTCACATTGGGAGGAGTGTAACTTaGCTGGGCCATACCCATTCC | + |
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Preference number: 2 (lower is better) Translates to: PEDLCMDKIVSMSPSLHIGRSVT*LGHTHS Trigger: GGAATGGGTATGGCCCAGCCAAGTTACACTCCTCCC...AATGTGAAGCGACGGGCTCATCGAGACAATTTTGTCCATGCAAAGATCCTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR-3UTR CCA 90 bp | GTTAGTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTATCACCATGGCTGGGTaGTGGGGATGGCTTGGCAAA | + |
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Preference number: 2 (lower is better) Translates to: VSDEVQTSVHLAPQHGSFITMAG*WGWLGK Trigger: TTTGCCAAGCCATCCCCACCACCCAGCCATGGTGAT...AAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATCACTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR-3UTR CCA 90 bp | TTGAGGAAAGCTGCCCAACTTAAGATTGTTTTGTCCACAGCCAAGGCTCAGAACATAGTCATTCCAGGGTaGGTAGGGGGTCCTCCGTGC | + |
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Preference number: 2 (lower is better) Translates to: LRKAAQLKIVLSTAKAQNIVIPG*VGGPPC Trigger: GCACGGAGGACCCCCTACCCACCCTGGAATGACTAT...GTTCTGAGCCTTGGCTGTGGACAAAACAATCTTAAGTTGGGCAGCTTTCCTCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR-3UTR TCA 90 bp | AAGATTGTTTTGTCCACAGCCAAGGCTCAGAACTTGAAGAAGCCTTCGCTCTGTTGTGGGGCTCTGTGCTaGCATAGTCATTCCAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: KIVLSTAKAQNLKKPSLCCGALC*HSHSRV Trigger: CACCCTGGAATGACTATGTCAGCACAGAGCCCCACA...ACAGAGCGAAGGCTTCTTCAAGTTCTGAGCCTTGGCTGTGGACAAAACAATCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR-3UTR GCA 90 bp | TACCACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAAGACAGTCATTCTGTAGGGGGTCCTCCGTaGATCACCATGGCTGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: YHSLFWIVNSLMNQDSHSVGGPP*ITMAGW Trigger: CCACCCAGCCATGGTGATGCACGGAGGACCCCCTAC...AGAATGACTGTCTTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTGGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR-3UTR CCA 90 bp | GATGAGCCCGTCGCTTCACATTTGTGTTCTTGTCCCATTGGTCCTCTGTTGCTTAGAAACGTAGTCCCCTaGCATGCTCTGCAAACTTCC | + |
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Preference number: 2 (lower is better) Translates to: DEPVASHLCSCPIGPLLLRNVVP*HALQTS Trigger: GGAAGTTTGCAGAGCATGCCAGGGGACTACGTTTCT...AAGCAACAGAGGACCAATGGGACAAGAACACAAATGTGAAGCGACGGGCTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR-3UTR CCA 90 bp | TTGAGGAAAGCTGCCCAACTTAAGATTGTTTTGTCCACAGCCAAGGCTCAGAACGCTGGGTGGTGGGGATaGCTTGGCAAATATGAATGC | + |
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Preference number: 2 (lower is better) Translates to: LRKAAQLKIVLSTAKAQNAGWWG*LGKYEC Trigger: GCATTCATATTTGCCAAGCCATCCCCACCACCCAGC...GTTCTGAGCCTTGGCTGTGGACAAAACAATCTTAAGTTGGGCAGCTTTCCTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR-3UTR CCA 90 bp | GTATGTGCGTTGAGGAAAGCTGCCCAACTTAAGATTGTTTTGTCCACAGCCAAGACCATGGCTGGGTGGTaGGGATGGCTTGGCAAATAT | + |
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Preference number: 2 (lower is better) Translates to: VCALRKAAQLKIVLSTAKTMAGW*GWLGKY Trigger: ATATTTGCCAAGCCATCCCCACCACCCAGCCATGGT...CTTGGCTGTGGACAAAACAATCTTAAGTTGGGCAGCTTTCCTCAACGCACATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR-3UTR CCA 90 bp | TCTCATTGGCCCAACAGGTTTAAAATATACCACAGTCTCTTCTGGATAGTGAATCTCCGTGCATCACCATaGCTGGGTGGTGGGGATGGC | + |
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Preference number: 2 (lower is better) Translates to: SHWPNRFKIYHSLFWIVNLRASP*LGGGDG Trigger: GCCATCCCCACCACCCAGCCATGGTGATGCACGGAG...ATTCACTATCCAGAAGAGACTGTGGTATATTTTAAACCTGTTGGGCCAATGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR CAA 90 bp | GTGTGTGTATGTGCGTTGAGGAAAGCTGCCCAACTTAAGATTGTTTaGTCCACAGCCAAGGCTCAGAACTTGAAGAAGCCTTCGCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: VCVCALRKAAQLKIV*STAKAQNLKKPSLC Trigger: ACAGAGCGAAGGCTTCTTCAAGTTCTGAGCCTTGGCTGTGGACAAAACAATCTTAAGTTGGGCAGCTTTCCTCAACGCACATACACACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR-3UTR TCA 90 bp | TCGATGAGCCCGTCGCTTCACATTTGTGTTCTTGTCCCATTGGTCCTCTGTTGCGGCAACATAACGGAGTaGTCAACAGAAATGTACAAG | + |
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Preference number: 2 (lower is better) Translates to: SMSPSLHICVLVPLVLCCGNITE*STEMYK Trigger: CTTGTACATTTCTGTTGATCACTCCGTTATGTTGCC...GCAACAGAGGACCAATGGGACAAGAACACAAATGTGAAGCGACGGGCTCATCGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR-3UTR TCA 90 bp | GAAAAGAGGACCCCATGGACATACAATACCAATTCCACAGCAGATCTGATACTAGTGAGGAACACGTGCTaGGAAAAGAGGACCCCATGG | + |
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Preference number: 2 (lower is better) Translates to: EKRTPWTYNTNSTADLILVRNTC*EKRTPW Trigger: CCATGGGGTCCTCTTTTCTCAGCACGTGTTCCTCAC...TAGTATCAGATCTGCTGTGGAATTGGTATTGTATGTCCATGGGGTCCTCTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR-3UTR GCA 90 bp | TCCGCAGCATGGTTCTTTTCTCATTGGCCCAACAGGTTTAAAATATACCACAGTTCCCCTGGCATGCTCTaGAAACTTCCCCTTGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: SAAWFFSHWPNRFKIYHSSPGML*KLPLAL Trigger: CAAGGCAAGGGGAAGTTTGCAGAGCATGCCAGGGGA...ACTGTGGTATATTTTAAACCTGTTGGGCCAATGAGAAAAGAACCATGCTGCGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR-3UTR CCA 90 bp | GAAAAGAGGACCCCATGGACATACAATACCAATTCCACAGCAGATCTGATACTAGGGAGGAGTGTAACTTaGCTGGGCCATACCCATTCC | + |
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Preference number: 2 (lower is better) Translates to: EKRTPWTYNTNSTADLILGRSVT*LGHTHS Trigger: GGAATGGGTATGGCCCAGCCAAGTTACACTCCTCCC...TAGTATCAGATCTGCTGTGGAATTGGTATTGTATGTCCATGGGGTCCTCTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR-3UTR CCA 90 bp | AATAATCACAGCTGTCTGGAGTTTCATATTAAGTGTCACATCTGGTCAAAGTTCCTCCGTGCATCACCATaGCTGGGTGGTGGGGATGGC | + |
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Preference number: 2 (lower is better) Translates to: NNHSCLEFHIKCHIWSKFLRASP*LGGGDG Trigger: GCCATCCCCACCACCCAGCCATGGTGATGCACGGAG...GAACTTTGACCAGATGTGACACTTAATATGAAACTCCAGACAGCTGTGATTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR-3UTR CCA 90 bp | AGTTCAGAGAGTCTTAAAATAGTTTTTGCGTGTGTTTCCTTCTTCCTTGAGTTCCTCCGTGCATCACCATaGCTGGGTGGTGGGGATGGC | + |
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Preference number: 2 (lower is better) Translates to: SSESLKIVFACVSFFLEFLRASP*LGGGDG Trigger: GCCATCCCCACCACCCAGCCATGGTGATGCACGGAG...GAACTCAAGGAAGAAGGAAACACACGCAAAAACTATTTTAAGACTCTCTGAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR-3UTR CCA 90 bp | TCGATGAGCCCGTCGCTTCACATTTGTGTTCTTGTCCCATTGGTCCTCTGTTGCCCTGTCCGCCAACATTaGGATCTACAGAATTTAACA | + |
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Preference number: 2 (lower is better) Translates to: SMSPSLHICVLVPLVLCCPVRQH*DLQNLT Trigger: TGTTAAATTCTGTAGATCCCAATGTTGGCGGACAGG...GCAACAGAGGACCAATGGGACAAGAACACAAATGTGAAGCGACGGGCTCATCGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR-3UTR TCA 90 bp | TACCACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAAGACAGTCATTCTTGTGGGGCTCTGTGCTaGCATAGTCATTCCAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: YHSLFWIVNSLMNQDSHSCGALC*HSHSRV Trigger: CACCCTGGAATGACTATGTCAGCACAGAGCCCCACA...AGAATGACTGTCTTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR-3UTR CCA 90 bp | GAAAAGAGGACCCCATGGACATACAATACCAATTCCACAGCAGATCTGATACTATCTCGCTCCGCAGCATaGTTCTTTTCTCATTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: EKRTPWTYNTNSTADLILSRSAA*FFSHWP Trigger: GGGCCAATGAGAAAAGAACCATGCTGCGGAGCGAGA...TAGTATCAGATCTGCTGTGGAATTGGTATTGTATGTCCATGGGGTCCTCTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR-3UTR CCA 90 bp | TTGAGGAAAGCTGCCCAACTTAAGATTGTTTTGTCCACAGCCAAGGCTCAGAACCATACCCATTCCCATTaGACCACCCTGAGAAACGTA | + |
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Preference number: 2 (lower is better) Translates to: LRKAAQLKIVLSTAKAQNHTHSH*TTLRNV Trigger: TACGTTTCTCAGGGTGGTCCAATGGGAATGGGTATG...GTTCTGAGCCTTGGCTGTGGACAAAACAATCTTAAGTTGGGCAGCTTTCCTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR-3UTR CCA 90 bp | GACCCCATGGACATACAATACCAATTCCACAGCAGATCTGATACTAGCAAAAACACCATGGCTGGGTGGTaGGGATGGCTTGGCAAATAT | + |
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Preference number: 2 (lower is better) Translates to: DPMDIQYQFHSRSDTSKNTMAGW*GWLGKY Trigger: ATATTTGCCAAGCCATCCCCACCACCCAGCCATGGT...GTTTTTGCTAGTATCAGATCTGCTGTGGAATTGGTATTGTATGTCCATGGGGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR-3UTR TCA 90 bp | TGTGCGTTGAGGAAAGCTGCCCAACTTAAGATTGTTTTGTCCACAGCCAAGGCTGGCAACATAACGGAGTaGTCAACAGAAATGTACAAG | + |
|
Preference number: 2 (lower is better) Translates to: CALRKAAQLKIVLSTAKAGNITE*STEMYK Trigger: CTTGTACATTTCTGTTGATCACTCCGTTATGTTGCC...AGCCTTGGCTGTGGACAAAACAATCTTAAGTTGGGCAGCTTTCCTCAACGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR TCA 90 bp | TATCCCCCAAGCTTTGAGTTCCTGATAGAATCCTACTTATGGTGCAACGACCATCACTGGCAAGCTCTTTaGAGAACAGTCCCCCAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: YPPSFEFLIESYLWCNDHHWQAL*RTVPQN Trigger: ATTTTGGGGGACTGTTCTTCAAAGAGCTTGCCAGTG...ATGGTCGTTGCACCATAAGTAGGATTCTATCAGGAACTCAAAGCTTGGGGGATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR TCA 90 bp | GATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCATTTTATACTATTGGGCATaGATGTCCATAACCTGTCCG | + |
|
Preference number: 2 (lower is better) Translates to: DEVQTSVHLAPQHGSFLILYYWA*MSITCP Trigger: CGGACAGGTTATGGACATTCATGCCCAATAGTATAA...AATGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR GCA 90 bp | TCTCATTGGCCCAACAGGTTTAAAATATACCACAGTCTCTTCTGGATAGTGAATCGTAGTCCCCTGGCATaGTCTGCAAACTTCCCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: SHWPNRFKIYHSLFWIVNRSPLA*SANFPL Trigger: CAAGGGGAAGTTTGCAGAGCATGCCAGGGGACTACG...ATTCACTATCCAGAAGAGACTGTGGTATATTTTAAACCTGTTGGGCCAATGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR GCA 90 bp | CACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAAGACAGTCATTCTTTTCGTAGTCCCCTGGCATaGTCTGCAAACTTCCCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: HSLFWIVNSLMNQDSHSFRSPLA*SANFPL Trigger: CAAGGGGAAGTTTGCAGAGCATGCCAGGGGACTACG...AAAAGAATGACTGTCTTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTCCAGAGGATCTTTGCATGGACAAAATTGTCTCGATGAGCCCGTCGCTTCACTACCACAGTCTCTTCTaGATAGTGAATTCACTGATG | + |
|
Preference number: 2 (lower is better) Translates to: SPEDLCMDKIVSMSPSLHYHSLF*IVNSLM Trigger: CATCAGTGAATTCACTATCCAGAAGAGACTGTGGTA...GTGAAGCGACGGGCTCATCGAGACAATTTTGTCCATGCAAAGATCCTCTGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CCA 90 bp | GACCCCATGGACATACAATACCAATTCCACAGCAGATCTGATACTAGCAAAAACAGAAACGTAGTCCCCTaGCATGCTCTGCAAACTTCC | + |
|
Preference number: 2 (lower is better) Translates to: DPMDIQYQFHSRSDTSKNRNVVP*HALQTS Trigger: GGAAGTTTGCAGAGCATGCCAGGGGACTACGTTTCT...GTTTTTGCTAGTATCAGATCTGCTGTGGAATTGGTATTGTATGTCCATGGGGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CCA 90 bp | TATGCTACAGTAGTTATAACTCTCGGAGTCTTTCTCCAGAGGATCTTTGCATGGAGAAACGTAGTCCCCTaGCATGCTCTGCAAACTTCC | + |
|
Preference number: 2 (lower is better) Translates to: YATVVITLGVFLQRIFAWRNVVP*HALQTS Trigger: GGAAGTTTGCAGAGCATGCCAGGGGACTACGTTTCT...CCATGCAAAGATCCTCTGGAGAAAGACTCCGAGAGTTATAACTACTGTAGCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR TCA 90 bp | AAGATTGTTTTGTCCACAGCCAAGGCTCAGAACTTGAAGAAGCCTTCGCTCTGTGGCAACATAACGGAGTaGTCAACAGAAATGTACAAG | + |
|
Preference number: 2 (lower is better) Translates to: KIVLSTAKAQNLKKPSLCGNITE*STEMYK Trigger: CTTGTACATTTCTGTTGATCACTCCGTTATGTTGCC...ACAGAGCGAAGGCTTCTTCAAGTTCTGAGCCTTGGCTGTGGACAAAACAATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR TCA 90 bp | AGACCGAACTCTGTACGAAGTTTGTTACAGTATTCTCTTGCTCCTTTTTATCCCAACAAAGGCCGGGCATaGAAACACATTCTAGCCGCT | + |
|
Preference number: 2 (lower is better) Translates to: RPNSVRSLLQYSLAPFYPNKGRA*KHILAA Trigger: AGCGGCTAGAATGTGTTTTCATGCCCGGCCTTTGTT...GGGATAAAAAGGAGCAAGAGAATACTGTAACAAACTTCGTACAGAGTTCGGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR TCA 90 bp | TCCGCAGCATGGTTCTTTTCTCATTGGCCCAACAGGTTTAAAATATACCACAGTCACTGGCAAGCTCTTTaGAGAACAGTCCCCCAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: SAAWFFSHWPNRFKIYHSHWQAL*RTVPQN Trigger: ATTTTGGGGGACTGTTCTTCAAAGAGCTTGCCAGTG...ACTGTGGTATATTTTAAACCTGTTGGGCCAATGAGAAAAGAACCATGCTGCGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR TCA 90 bp | TCTCATTGGCCCAACAGGTTTAAAATATACCACAGTCTCTTCTGGATAGTGAATCCAAGGCTCAGAACTTaGAGAAGCCTTCGCTCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: SHWPNRFKIYHSLFWIVNPRLRT*RSLRSV Trigger: GACAGAGCGAAGGCTTCTTCAAGTTCTGAGCCTTGG...ATTCACTATCCAGAAGAGACTGTGGTATATTTTAAACCTGTTGGGCCAATGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR TCA 90 bp | AAAATATACCACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAAGACAGTTGTGGGGCTCTGTGCTaGCATAGTCATTCCAGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: KIYHSLFWIVNSLMNQDSCGALC*HSHSRV Trigger: CACCCTGGAATGACTATGTCAGCACAGAGCCCCACA...ACTGTCTTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTGGTATATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CCA 90 bp | TTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCATTGGCCCAAATTAAGTGTCACATCTaGTCAAAGTTCAGAGAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: FRQVSISLRSMVLFSLAQIKCHI*SKFRES Trigger: AGACTCTCTGAACTTTGACCAGATGTGACACTTAAT...TTGGGCCAATGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CCA 90 bp | GTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCAATTAAGTGTCACATCTaGTCAAAGTTCAGAGAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: VMRFRQVSISLRSMVLFSIKCHI*SKFRES Trigger: AGACTCTCTGAACTTTGACCAGATGTGACACTTAAT...TGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CCA 90 bp | CTTAGTCCCTATGTTTATGCTACAGTAGTTATAACTCTCGGAGTCTTTCTCCAGAGAAACGTAGTCCCCTaGCATGCTCTGCAAACTTCC | + |
|
Preference number: 2 (lower is better) Translates to: LSPYVYATVVITLGVFLQRNVVP*HALQTS Trigger: GGAAGTTTGCAGAGCATGCCAGGGGACTACGTTTCT...CTGGAGAAAGACTCCGAGAGTTATAACTACTGTAGCATAAACATAGGGACTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CCA 90 bp | AGTTCAGAGAGTCTTAAAATAGTTTTTGCGTGTGTTTCCTTCTTCCTTGAGTTCGGGAGGAGTGTAACTTaGCTGGGCCATACCCATTCC | + |
|
Preference number: 2 (lower is better) Translates to: SSESLKIVFACVSFFLEFGRSVT*LGHTHS Trigger: GGAATGGGTATGGCCCAGCCAAGTTACACTCCTCCC...GAACTCAAGGAAGAAGGAAACACACGCAAAAACTATTTTAAGACTCTCTGAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR-3UTR CCA 90 bp | TCTCATTGGCCCAACAGGTTTAAAATATACCACAGTCTCTTCTGGATAGTGAATACCATGGCTGGGTGGTaGGGATGGCTTGGCAAATAT | + |
|
Preference number: 2 (lower is better) Translates to: SHWPNRFKIYHSLFWIVNTMAGW*GWLGKY Trigger: ATATTTGCCAAGCCATCCCCACCACCCAGCCATGGT...ATTCACTATCCAGAAGAGACTGTGGTATATTTTAAACCTGTTGGGCCAATGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CCA 90 bp | GTATGTGCGTTGAGGAAAGCTGCCCAACTTAAGATTGTTTTGTCCACAGCCAAGCCTGTCCGCCAACATTaGGATCTACAGAATTTAACA | + |
|
Preference number: 2 (lower is better) Translates to: VCALRKAAQLKIVLSTAKPVRQH*DLQNLT Trigger: TGTTAAATTCTGTAGATCCCAATGTTGGCGGACAGG...CTTGGCTGTGGACAAAACAATCTTAAGTTGGGCAGCTTTCCTCAACGCACATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR TCA 90 bp | TATCCCCCAAGCTTTGAGTTCCTGATAGAATCCTACTTATGGTGCAACGACCATTTATCCCCCAAGCTTTaGGTTCCTGATAGAATCCTA | + |
|
Preference number: 2 (lower is better) Translates to: YPPSFEFLIESYLWCNDHLSPKL*VPDRIL Trigger: TAGGATTCTATCAGGAACTCAAAGCTTGGGGGATAA...ATGGTCGTTGCACCATAAGTAGGATTCTATCAGGAACTCAAAGCTTGGGGGATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR-3UTR CCA 90 bp | TGTGCGTTGAGGAAAGCTGCCCAACTTAAGATTGTTTTGTCCACAGCCAAGGCTATTAAGTGTCACATCTaGTCAAAGTTCAGAGAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: CALRKAAQLKIVLSTAKAIKCHI*SKFRES Trigger: AGACTCTCTGAACTTTGACCAGATGTGACACTTAAT...AGCCTTGGCTGTGGACAAAACAATCTTAAGTTGGGCAGCTTTCCTCAACGCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CCA 90 bp | GCATGGTTCTTTTCTCATTGGCCCAACAGGTTTAAAATATACCACAGTCTCTTCCATACCCATTCCCATTaGACCACCCTGAGAAACGTA | + |
|
Preference number: 2 (lower is better) Translates to: AWFFSHWPNRFKIYHSLFHTHSH*TTLRNV Trigger: TACGTTTCTCAGGGTGGTCCAATGGGAATGGGTATG...GAAGAGACTGTGGTATATTTTAAACCTGTTGGGCCAATGAGAAAAGAACCATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR-3UTR CCA 90 bp | TACCACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAAGACAGTCATTCTCATACCCATTCCCATTaGACCACCCTGAGAAACGTA | + |
|
Preference number: 2 (lower is better) Translates to: YHSLFWIVNSLMNQDSHSHTHSH*TTLRNV Trigger: TACGTTTCTCAGGGTGGTCCAATGGGAATGGGTATG...AGAATGACTGTCTTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTGGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR TCA 90 bp | TCTCATTGGCCCAACAGGTTTAAAATATACCACAGTCTCTTCTGGATAGTGAATCACTGGCAAGCTCTTTaGAGAACAGTCCCCCAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: SHWPNRFKIYHSLFWIVNHWQAL*RTVPQN Trigger: ATTTTGGGGGACTGTTCTTCAAAGAGCTTGCCAGTG...ATTCACTATCCAGAAGAGACTGTGGTATATTTTAAACCTGTTGGGCCAATGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR TCA 90 bp | TCCGCAGCATGGTTCTTTTCTCATTGGCCCAACAGGTTTAAAATATACCACAGTTTATACTATTGGGCATaGATGTCCATAACCTGTCCG | + |
|
Preference number: 2 (lower is better) Translates to: SAAWFFSHWPNRFKIYHSLYYWA*MSITCP Trigger: CGGACAGGTTATGGACATTCATGCCCAATAGTATAA...ACTGTGGTATATTTTAAACCTGTTGGGCCAATGAGAAAAGAACCATGCTGCGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR GCA 90 bp | TCCGCAGCATGGTTCTTTTCTCATTGGCCCAACAGGTTTAAAATATACCACAGTCTGCAAACTTCCCCTTaGCTTGAGATTGCTTTACAT | + |
|
Preference number: 2 (lower is better) Translates to: SAAWFFSHWPNRFKIYHSLQTSP*LEIALH Trigger: ATGTAAAGCAATCTCAAGGCAAGGGGAAGTTTGCAG...ACTGTGGTATATTTTAAACCTGTTGGGCCAATGAGAAAAGAACCATGCTGCGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CCA 90 bp | AAGATTGTTTTGTCCACAGCCAAGGCTCAGAACTTGAAGAAGCCTTCGCTCTGTATTAAGTGTCACATCTaGTCAAAGTTCAGAGAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: KIVLSTAKAQNLKKPSLCIKCHI*SKFRES Trigger: AGACTCTCTGAACTTTGACCAGATGTGACACTTAAT...ACAGAGCGAAGGCTTCTTCAAGTTCTGAGCCTTGGCTGTGGACAAAACAATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| 3UTR-3UTR CCA 90 bp | AAACAATTAAAAGACCGAACTCTGTACGAAGTTTGTTACAGTATTCTCTTGCTCTCTCGCTCCGCAGCATaGTTCTTTTCTCATTGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: KQLKDRTLYEVCYSILLLSRSAA*FFSHWP Trigger: GGGCCAATGAGAAAAGAACCATGCTGCGGAGCGAGA...GAGCAAGAGAATACTGTAACAAACTTCGTACAGAGTTCGGTCTTTTAATTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CCA 90 bp | AAACAATTAAAAGACCGAACTCTGTACGAAGTTTGTTACAGTATTCTCTTGCTCGCTGGGTGGTGGGGATaGCTTGGCAAATATGAATGC | + |
|
Preference number: 2 (lower is better) Translates to: KQLKDRTLYEVCYSILLLAGWWG*LGKYEC Trigger: GCATTCATATTTGCCAAGCCATCCCCACCACCCAGC...GAGCAAGAGAATACTGTAACAAACTTCGTACAGAGTTCGGTCTTTTAATTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR GCA 90 bp | AGACCGAACTCTGTACGAAGTTTGTTACAGTATTCTCTTGCTCCTTTTTATCCCCTGCAAACTTCCCCTTaGCTTGAGATTGCTTTACAT | + |
|
Preference number: 2 (lower is better) Translates to: RPNSVRSLLQYSLAPFYPLQTSP*LEIALH Trigger: ATGTAAAGCAATCTCAAGGCAAGGGGAAGTTTGCAG...GGGATAAAAAGGAGCAAGAGAATACTGTAACAAACTTCGTACAGAGTTCGGTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CCA 90 bp | TCCGCAGCATGGTTCTTTTCTCATTGGCCCAACAGGTTTAAAATATACCACAGTTACCACAGTCTCTTCTaGATAGTGAATTCACTGATG | + |
|
Preference number: 2 (lower is better) Translates to: SAAWFFSHWPNRFKIYHSYHSLF*IVNSLM Trigger: CATCAGTGAATTCACTATCCAGAAGAGACTGTGGTA...ACTGTGGTATATTTTAAACCTGTTGGGCCAATGAGAAAAGAACCATGCTGCGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CCA 90 bp | AAAGACCGAACTCTGTACGAAGTTTGTTACAGTATTCTCTTGCTCCTTTTTATCCATACCCATTCCCATTaGACCACCCTGAGAAACGTA | + |
|
Preference number: 2 (lower is better) Translates to: KDRTLYEVCYSILLLLFIHTHSH*TTLRNV Trigger: TACGTTTCTCAGGGTGGTCCAATGGGAATGGGTATG...GATAAAAAGGAGCAAGAGAATACTGTAACAAACTTCGTACAGAGTTCGGTCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTCATTGGCCCAACAGGTTTAAAATATACCACAGTCTCTTCTGGATAGTGAATCCTGTCCGCCAACATTaGGATCTACAGAATTTAACA | + |
|
Preference number: 2 (lower is better) Translates to: SHWPNRFKIYHSLFWIVNPVRQH*DLQNLT Trigger: TGTTAAATTCTGTAGATCCCAATGTTGGCGGACAGG...ATTCACTATCCAGAAGAGACTGTGGTATATTTTAAACCTGTTGGGCCAATGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR TCA 90 bp | AATAATCACAGCTGTCTGGAGTTTCATATTAAGTGTCACATCTGGTCAAAGTTCTTATACTATTGGGCATaGATGTCCATAACCTGTCCG | + |
|
Preference number: 2 (lower is better) Translates to: NNHSCLEFHIKCHIWSKFLYYWA*MSITCP Trigger: CGGACAGGTTATGGACATTCATGCCCAATAGTATAA...GAACTTTGACCAGATGTGACACTTAATATGAAACTCCAGACAGCTGTGATTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR GCA 90 bp | AAAATAGTTTTTGCGTGTGTTTCCTTCTTCCTTGAGTTCCCTTATACTATTGGGCTGCAAACTTCCCCTTaGCTTGAGATTGCTTTACAT | + |
|
Preference number: 2 (lower is better) Translates to: KIVFACVSFFLEFPYTIGLQTSP*LEIALH Trigger: ATGTAAAGCAATCTCAAGGCAAGGGGAAGTTTGCAG...CCCAATAGTATAAGGGAACTCAAGGAAGAAGGAAACACACGCAAAAACTATTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTCATTGGCCCAACAGGTTTAAAATATACCACAGTCTCTTCTGGATAGTGAATTACCACAGTCTCTTCTaGATAGTGAATTCACTGATG | + |
|
Preference number: 2 (lower is better) Translates to: SHWPNRFKIYHSLFWIVNYHSLF*IVNSLM Trigger: CATCAGTGAATTCACTATCCAGAAGAGACTGTGGTA...ATTCACTATCCAGAAGAGACTGTGGTATATTTTAAACCTGTTGGGCCAATGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CCA 90 bp | GAAAAGAGGACCCCATGGACATACAATACCAATTCCACAGCAGATCTGATACTATGGTTCTTTTCTCATTaGCCCAACAGGTTTAAAATA | + |
|
Preference number: 2 (lower is better) Translates to: EKRTPWTYNTNSTADLILWFFSH*PNRFKI Trigger: TATTTTAAACCTGTTGGGCCAATGAGAAAAGAACCA...TAGTATCAGATCTGCTGTGGAATTGGTATTGTATGTCCATGGGGTCCTCTTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR TCA 90 bp | AAACAATTAAAAGACCGAACTCTGTACGAAGTTTGTTACAGTATTCTCTTGCTCGGCAACATAACGGAGTaGTCAACAGAAATGTACAAG | + |
|
Preference number: 2 (lower is better) Translates to: KQLKDRTLYEVCYSILLLGNITE*STEMYK Trigger: CTTGTACATTTCTGTTGATCACTCCGTTATGTTGCC...GAGCAAGAGAATACTGTAACAAACTTCGTACAGAGTTCGGTCTTTTAATTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR TCA 90 bp | AAACAATTAAAAGACCGAACTCTGTACGAAGTTTGTTACAGTATTCTCTTGCTCTTATCCCCCAAGCTTTaGGTTCCTGATAGAATCCTA | + |
|
Preference number: 2 (lower is better) Translates to: KQLKDRTLYEVCYSILLLLSPKL*VPDRIL Trigger: TAGGATTCTATCAGGAACTCAAAGCTTGGGGGATAA...GAGCAAGAGAATACTGTAACAAACTTCGTACAGAGTTCGGTCTTTTAATTGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CCA 90 bp | AGACCGAACTCTGTACGAAGTTTGTTACAGTATTCTCTTGCTCCTTTTTATCCCTGGTTCTTTTCTCATTaGCCCAACAGGTTTAAAATA | + |
|
Preference number: 2 (lower is better) Translates to: RPNSVRSLLQYSLAPFYPWFFSH*PNRFKI Trigger: TATTTTAAACCTGTTGGGCCAATGAGAAAAGAACCA...GGGATAAAAAGGAGCAAGAGAATACTGTAACAAACTTCGTACAGAGTTCGGTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CCA 90 bp | ATAATCACAGCTGTCTGGAGTTTCATATTAAGTGTCACATCTGGTCAAAGTTCAATTAAGTGTCACATCTaGTCAAAGTTCAGAGAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: IITAVWSFILSVTSGQSSIKCHI*SKFRES Trigger: AGACTCTCTGAACTTTGACCAGATGTGACACTTAAT...TGAACTTTGACCAGATGTGACACTTAATATGAAACTCCAGACAGCTGTGATTAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR CCA 72 bp | GTAGGGGGTCCTCCGTGCATCACCATGGCTGGGTGGTaGGGATGGCTTGGCAAATATGAATGCATTGGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: VGGPPCITMAGW*GWLGKYECIGG Trigger: ACCCCCAATGCATTCATATTTGCCAAGCCATCCCCACCACCCAGCCATGGTGATGCACGGAGGACCCCCTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CAA 90 bp | GGTCCTCCGTGCATCACCATGGCTGGGTGGTGGGGATGGCTTGGCAAATATGAATGTGTTCTTGTCCCATaGGTCCTCTGTTGCTTGATG | + |
|
Preference number: 3 (lower is better) Translates to: GPPCITMAGWWGWLGKYECVLVP*VLCCLM Trigger: CATCAAGCAACAGAGGACCAATGGGACAAGAACACA...TTCATATTTGCCAAGCCATCCCCACCACCCAGCCATGGTGATGCACGGAGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CAA 90 bp | CCAGAGGATCTTTGCATGGACAAAATTGTCTCGATGAGCCCGTCGCTTCACATTGGGGAGGAGTGTAACTaGGCTGGGCCATACCCATTC | + |
|
Preference number: 3 (lower is better) Translates to: PEDLCMDKIVSMSPSLHIGEECN*AGPYPF Trigger: GAATGGGTATGGCCCAGCCAAGTTACACTCCTCCCC...AATGTGAAGCGACGGGCTCATCGAGACAATTTTGTCCATGCAAAGATCCTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CAA 90 bp | TTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCATTGGCCCAACCATACCCATTCCCATaGGACCACCCTGAGAAACGT | + |
|
Preference number: 3 (lower is better) Translates to: FRQVSISLRSMVLFSLAQPYPFP*DHPEKR Trigger: ACGTTTCTCAGGGTGGTCCAATGGGAATGGGTATGG...TTGGGCCAATGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CAA 90 bp | TTGAGGAAAGCTGCCCAACTTAAGATTGTTTTGTCCACAGCCAAGGCTCAGAACGGGGAGGAGTGTAACTaGGCTGGGCCATACCCATTC | + |
|
Preference number: 3 (lower is better) Translates to: LRKAAQLKIVLSTAKAQNGEECN*AGPYPF Trigger: GAATGGGTATGGCCCAGCCAAGTTACACTCCTCCCC...GTTCTGAGCCTTGGCTGTGGACAAAACAATCTTAAGTTGGGCAGCTTTCCTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGATTGTTTTGTCCACAGCCAAGGCTCAGAACTTGAAGAAGCCTTCGCTCTGTGGTGGTGGGGATGGCTaGGCAAATATGAATGCATTG | + |
|
Preference number: 3 (lower is better) Translates to: KIVLSTAKAQNLKKPSLCGGGDG*ANMNAL Trigger: CAATGCATTCATATTTGCCAAGCCATCCCCACCACC...ACAGAGCGAAGGCTTCTTCAAGTTCTGAGCCTTGGCTGTGGACAAAACAATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CAA 90 bp | GTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCATTCACATTTGTGTTCTaGTCCCATTGGTCCTCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: VMRFRQVSISLRSMVLFSFTFVF*SHWSSV Trigger: AACAGAGGACCAATGGGACAAGAACACAAATGTGAA...TGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTCCAGAGGATCTTTGCATGGACAAAATTGTCTCGATGAGCCCGTCGCTTCACTTCACATTTGTGTTCTaGTCCCATTGGTCCTCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: SPEDLCMDKIVSMSPSLHFTFVF*SHWSSV Trigger: AACAGAGGACCAATGGGACAAGAACACAAATGTGAA...GTGAAGCGACGGGCTCATCGAGACAATTTTGTCCATGCAAAGATCCTCTGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CAA 90 bp | ATTCTAGCCGCTGGAGTTAGTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGAAGACAGTCATTCTTTaGGGAACAACACACATAGTG | + |
|
Preference number: 3 (lower is better) Translates to: ILAAGVSDEVQTSVHLAPKTVIL*GTTHIV Trigger: CACTATGTGTGTTGTTCCCAAAAGAATGACTGTCTT...CGGAGCGAGATGGACACTTGTCTGAACCTCATCACTAACTCCAGCGGCTAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CAA 90 bp | GATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCATTCAACTTAAGATTGTTTaGTCCACAGCCAAGGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: DEVQTSVHLAPQHGSFLIQLKIV*STAKAQ Trigger: CTGAGCCTTGGCTGTGGACAAAACAATCTTAAGTTG...AATGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CAA 90 bp | TATGCTACAGTAGTTATAACTCTCGGAGTCTTTCTCCAGAGGATCTTTGCATGGCCATACCCATTCCCATaGGACCACCCTGAGAAACGT | + |
|
Preference number: 3 (lower is better) Translates to: YATVVITLGVFLQRIFAWPYPFP*DHPEKR Trigger: ACGTTTCTCAGGGTGGTCCAATGGGAATGGGTATGG...CCATGCAAAGATCCTCTGGAGAAAGACTCCGAGAGTTATAACTACTGTAGCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR TCA 72 bp | CTCCAGAGGATCTTTGCATGGACAAAATTGTCTCGATaGGCCCGTCGCTTCACATTTGTGTTCTTGTCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: LQRIFAWTKLSR*ARRFTFVFLSH Trigger: ATGGGACAAGAACACAAATGTGAAGCGACGGGCTCATCGAGACAATTTTGTCCATGCAAAGATCCTCTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CAA 90 bp | AAAGACCGAACTCTGTACGAAGTTTGTTACAGTATTCTCTTGCTCCTTTTTATCGGGGAGGAGTGTAACTaGGCTGGGCCATACCCATTC | + |
|
Preference number: 3 (lower is better) Translates to: KDRTLYEVCYSILLLLFIGEECN*AGPYPF Trigger: GAATGGGTATGGCCCAGCCAAGTTACACTCCTCCCC...GATAAAAAGGAGCAAGAGAATACTGTAACAAACTTCGTACAGAGTTCGGTCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CAA 90 bp | AAAATATACCACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAAGACAGTGGGGAGGAGTGTAACTaGGCTGGGCCATACCCATTC | + |
|
Preference number: 3 (lower is better) Translates to: KIYHSLFWIVNSLMNQDSGEECN*AGPYPF Trigger: GAATGGGTATGGCCCAGCCAAGTTACACTCCTCCCC...ACTGTCTTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTGGTATATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CAA 90 bp | TTGAGGAAAGCTGCCCAACTTAAGATTGTTTTGTCCACAGCCAAGGCTCAGAACACCTGTCCGCCAACATaGGGATCTACAGAATTTAAC | + |
|
Preference number: 3 (lower is better) Translates to: LRKAAQLKIVLSTAKAQNTCPPT*GSTEFN Trigger: GTTAAATTCTGTAGATCCCAATGTTGGCGGACAGGT...GTTCTGAGCCTTGGCTGTGGACAAAACAATCTTAAGTTGGGCAGCTTTCCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR GCA 72 bp | AGTTATAACTCTCGGAGTCTTTCTCCAGAGGATCTTTaGATGGACAAAATTGTCTCGATGAGCCCGTCGCTT | + |
|
Preference number: 3 (lower is better) Translates to: SYNSRSLSPEDL*MDKIVSMSPSL Trigger: AAGCGACGGGCTCATCGAGACAATTTTGTCCATGCAAAGATCCTCTGGAGAAAGACTCCGAGAGTTATAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR CCA 72 bp | TGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCATTaGCCCAACAGGTTTAAAATATACCACAGTCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: CPSRSAAWFFSH*PNRFKIYHSLF Trigger: GAAGAGACTGTGGTATATTTTAAACCTGTTGGGCCAATGAGAAAAGAACCATGCTGCGGAGCGAGATGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CAA 90 bp | AATTGTCTCGATGAGCCCGTCGCTTCACATTTGTGTTCTTGTCCCATTGGTCCTAAGACAGTCATTCTTTaGGGAACAACACACATAGTG | + |
|
Preference number: 3 (lower is better) Translates to: NCLDEPVASHLCSCPIGPKTVIL*GTTHIV Trigger: CACTATGTGTGTTGTTCCCAAAAGAATGACTGTCTT...AGGACCAATGGGACAAGAACACAAATGTGAAGCGACGGGCTCATCGAGACAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CAA 90 bp | GAAAAGAGGACCCCATGGACATACAATACCAATTCCACAGCAGATCTGATACTATCACTGGCAAGCTCTTaGAAGAACAGTCCCCCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: EKRTPWTYNTNSTADLILSLASS*KNSPPK Trigger: TTTTGGGGGACTGTTCTTCAAAGAGCTTGCCAGTGA...TAGTATCAGATCTGCTGTGGAATTGGTATTGTATGTCCATGGGGTCCTCTTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CAA 90 bp | GAAAAGAGGACCCCATGGACATACAATACCAATTCCACAGCAGATCTGATACTAAAACTTCCCCTTGCCTaGAGATTGCTTTACATGGCG | + |
|
Preference number: 3 (lower is better) Translates to: EKRTPWTYNTNSTADLILKLPLA*RLLYMA Trigger: CGCCATGTAAAGCAATCTCAAGGCAAGGGGAAGTTT...TAGTATCAGATCTGCTGTGGAATTGGTATTGTATGTCCATGGGGTCCTCTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CAA 90 bp | TATAACTCTCGGAGTCTTTCTCCAGAGGATCTTTGCATGGACAAAATTGTCTCGAAACTTCCCCTTGCCTaGAGATTGCTTTACATGGCG | + |
|
Preference number: 3 (lower is better) Translates to: YNSRSLSPEDLCMDKIVSKLPLA*RLLYMA Trigger: CGCCATGTAAAGCAATCTCAAGGCAAGGGGAAGTTT...CGAGACAATTTTGTCCATGCAAAGATCCTCTGGAGAAAGACTCCGAGAGTTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CAA 90 bp | TACCACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAAGACAGTCATTCTGGTGGTGGGGATGGCTaGGCAAATATGAATGCATTG | + |
|
Preference number: 3 (lower is better) Translates to: YHSLFWIVNSLMNQDSHSGGGDG*ANMNAL Trigger: CAATGCATTCATATTTGCCAAGCCATCCCCACCACC...AGAATGACTGTCTTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CAA 90 bp | TATCCCCCAAGCTTTGAGTTCCTGATAGAATCCTACTTATGGTGCAACGACCATCTACAGAATTTAACATaGTGGGGCTCTGTGCTGACA | + |
|
Preference number: 3 (lower is better) Translates to: YPPSFEFLIESYLWCNDHLQNLT*WGSVLT Trigger: TGTCAGCACAGAGCCCCACAATGTTAAATTCTGTAG...ATGGTCGTTGCACCATAAGTAGGATTCTATCAGGAACTCAAAGCTTGGGGGATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR TCA 72 bp | TTAAGATTGTTTTGTCCACAGCCAAGGCTCAGAACTTaGAGAAGCCTTCGCTCTGTCTCTAGATCTTCACTG | + |
|
Preference number: 3 (lower is better) Translates to: LRLFCPQPRLRT*RSLRSVSRSSL Trigger: CAGTGAAGATCTAGAGACAGAGCGAAGGCTTCTTCAAGTTCTGAGCCTTGGCTGTGGACAAAACAATCTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CAA 90 bp | CTTAGTCCCTATGTTTATGCTACAGTAGTTATAACTCTCGGAGTCTTTCTCCAGTGTGTTCTTGTCCCATaGGTCCTCTGTTGCTTGATG | + |
|
Preference number: 3 (lower is better) Translates to: LSPYVYATVVITLGVFLQCVLVP*VLCCLM Trigger: CATCAAGCAACAGAGGACCAATGGGACAAGAACACA...CTGGAGAAAGACTCCGAGAGTTATAACTACTGTAGCATAAACATAGGGACTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CAA 90 bp | GTATGTGCGTTGAGGAAAGCTGCCCAACTTAAGATTGTTTTGTCCACAGCCAAGAAGACAGTCATTCTTTaGGGAACAACACACATAGTG | + |
|
Preference number: 3 (lower is better) Translates to: VCALRKAAQLKIVLSTAKKTVIL*GTTHIV Trigger: CACTATGTGTGTTGTTCCCAAAAGAATGACTGTCTT...CTTGGCTGTGGACAAAACAATCTTAAGTTGGGCAGCTTTCCTCAACGCACATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CAA 90 bp | ATAATCACAGCTGTCTGGAGTTTCATATTAAGTGTCACATCTGGTCAAAGTTCACCATACCCATTCCCATaGGACCACCCTGAGAAACGT | + |
|
Preference number: 3 (lower is better) Translates to: IITAVWSFILSVTSGQSSPYPFP*DHPEKR Trigger: ACGTTTCTCAGGGTGGTCCAATGGGAATGGGTATGG...TGAACTTTGACCAGATGTGACACTTAATATGAAACTCCAGACAGCTGTGATTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CAA 90 bp | AAAATAGTTTTTGCGTGTGTTTCCTTCTTCCTTGAGTTCCCTTATACTATTGGGCCATACCCATTCCCATaGGACCACCCTGAGAAACGT | + |
|
Preference number: 3 (lower is better) Translates to: KIVFACVSFFLEFPYTIGPYPFP*DHPEKR Trigger: ACGTTTCTCAGGGTGGTCCAATGGGAATGGGTATGG...CCCAATAGTATAAGGGAACTCAAGGAAGAAGGAAACACACGCAAAAACTATTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTCATTGGCCCAACAGGTTTAAAATATACCACAGTCTCTTCTGGATAGTGAATAAACTTCCCCTTGCCTaGAGATTGCTTTACATGGCG | + |
|
Preference number: 3 (lower is better) Translates to: SHWPNRFKIYHSLFWIVNKLPLA*RLLYMA Trigger: CGCCATGTAAAGCAATCTCAAGGCAAGGGGAAGTTT...ATTCACTATCCAGAAGAGACTGTGGTATATTTTAAACCTGTTGGGCCAATGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CAA 90 bp | AGTTCAGAGAGTCTTAAAATAGTTTTTGCGTGTGTTTCCTTCTTCCTTGAGTTCGGTGGTGGGGATGGCTaGGCAAATATGAATGCATTG | + |
|
Preference number: 3 (lower is better) Translates to: SSESLKIVFACVSFFLEFGGGDG*ANMNAL Trigger: CAATGCATTCATATTTGCCAAGCCATCCCCACCACC...GAACTCAAGGAAGAAGGAAACACACGCAAAAACTATTTTAAGACTCTCTGAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR TCA 72 bp | ACAGTATTCTCTTGCTCCTTTTTATCCCCCAAGCTTTaGGTTCCTGATAGAATCCTACTTATGGTGCAACGA | + |
|
Preference number: 3 (lower is better) Translates to: TVFSCSFLSPKL*VPDRILLMVQR Trigger: TCGTTGCACCATAAGTAGGATTCTATCAGGAACTCAAAGCTTGGGGGATAAAAAGGAGCAAGAGAATACTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CAA 90 bp | GTTATAACTCTCGGAGTCTTTCTCCAGAGGATCTTTGCATGGACAAAATTGTCTTTCACATTTGTGTTCTaGTCCCATTGGTCCTCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: VITLGVFLQRIFAWTKLSFTFVF*SHWSSV Trigger: AACAGAGGACCAATGGGACAAGAACACAAATGTGAA...AGACAATTTTGTCCATGCAAAGATCCTCTGGAGAAAGACTCCGAGAGTTATAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CAA 90 bp | AGACCGAACTCTGTACGAAGTTTGTTACAGTATTCTCTTGCTCCTTTTTATCCCACGACCATGAATAACTaGTGTGTGTGTGTGTGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: RPNSVRSLLQYSLAPFYPTTMNN*CVCVCV Trigger: TACACACACACACACACACAAGTTATTCATGGTCGT...GGGATAAAAAGGAGCAAGAGAATACTGTAACAAACTTCGTACAGAGTTCGGTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CAA 90 bp | CACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAAGACAGTCATTCTTTTCTACAGAATTTAACATaGTGGGGCTCTGTGCTGACA | + |
|
Preference number: 3 (lower is better) Translates to: HSLFWIVNSLMNQDSHSFLQNLT*WGSVLT Trigger: TGTCAGCACAGAGCCCCACAATGTTAAATTCTGTAG...AAAAGAATGACTGTCTTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CAA 90 bp | AGGTTTAAAATATACCACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAAAAACTTCCCCTTGCCTaGAGATTGCTTTACATGGCG | + |
|
Preference number: 3 (lower is better) Translates to: RFKIYHSLFWIVNSLMNQKLPLA*RLLYMA Trigger: CGCCATGTAAAGCAATCTCAAGGCAAGGGGAAGTTT...TTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTGGTATATTTTAAACCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CAA 90 bp | AGTTCAGAGAGTCTTAAAATAGTTTTTGCGTGTGTTTCCTTCTTCCTTGAGTTCCTACAGAATTTAACATaGTGGGGCTCTGTGCTGACA | + |
|
Preference number: 3 (lower is better) Translates to: SSESLKIVFACVSFFLEFLQNLT*WGSVLT Trigger: TGTCAGCACAGAGCCCCACAATGTTAAATTCTGTAG...GAACTCAAGGAAGAAGGAAACACACGCAAAAACTATTTTAAGACTCTCTGAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CAA 90 bp | ATAATCACAGCTGTCTGGAGTTTCATATTAAGTGTCACATCTGGTCAAAGTTCAACCTGTCCGCCAACATaGGGATCTACAGAATTTAAC | + |
|
Preference number: 3 (lower is better) Translates to: IITAVWSFILSVTSGQSSTCPPT*GSTEFN Trigger: GTTAAATTCTGTAGATCCCAATGTTGGCGGACAGGT...TGAACTTTGACCAGATGTGACACTTAATATGAAACTCCAGACAGCTGTGATTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CAA 90 bp | AATAATCACAGCTGTCTGGAGTTTCATATTAAGTGTCACATCTGGTCAAAGTTCACCTGTCCGCCAACATaGGGATCTACAGAATTTAAC | + |
|
Preference number: 3 (lower is better) Translates to: NNHSCLEFHIKCHIWSKFTCPPT*GSTEFN Trigger: GTTAAATTCTGTAGATCCCAATGTTGGCGGACAGGT...GAACTTTGACCAGATGTGACACTTAATATGAAACTCCAGACAGCTGTGATTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTCATTGGCCCAACAGGTTTAAAATATACCACAGTCTCTTCTGGATAGTGAATAAGACAGTCATTCTTTaGGGAACAACACACATAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SHWPNRFKIYHSLFWIVNKTVIL*GTTHIV Trigger: CACTATGTGTGTTGTTCCCAAAAGAATGACTGTCTT...ATTCACTATCCAGAAGAGACTGTGGTATATTTTAAACCTGTTGGGCCAATGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | TCGATGAGCCCGTCGCTTCACATTTGTGTTCTTGTCCCATTGGTCCTCTGTTGCCGCCGTAGTGCTGCGTaGCGTGGAGCGGCGGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SMSPSLHICVLVPLVLCCRRSAA*RGAAAR Trigger: ACGGGCCGCCGCTCCACGCCACGCAGCACTACGGCG...GCAACAGAGGACCAATGGGACAAGAACACAAATGTGAAGCGACGGGCTCATCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | GCCGCTGGAGTTAGTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATCCCACTGGAGGGTCCTaGGGTGCCTGCGGAGTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: AAGVSDEVQTSVHLAPQHPTGGS*GACGVR Trigger: ACGCACTCCGCAGGCACCCCAGGACCCTCCAGTGGG...ATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATCACTAACTCCAGCGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR TCA 90 bp | GCCGCTGGAGTTAGTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATATCGGCCGCGGCGCGTaGGGGTCTCCGTACATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: AAGVSDEVQTSVHLAPQHIGRGA*GSPYME Trigger: TTCCATGTACGGAGACCCTCACGCGCCGCGGCCGAT...ATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATCACTAACTCCAGCGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | TTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCATTGGCCCAACGCCGTAGTGCTGCGTaGCGTGGAGCGGCGGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: FRQVSISLRSMVLFSLAQRRSAA*RGAAAR Trigger: ACGGGCCGCCGCTCCACGCCACGCAGCACTACGGCG...TTGGGCCAATGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | TGTGCGTTGAGGAAAGCTGCCCAACTTAAGATTGTTTTGTCCACAGCCAAGGCTCGCCGTAGTGCTGCGTaGCGTGGAGCGGCGGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: CALRKAAQLKIVLSTAKARRSAA*RGAAAR Trigger: ACGGGCCGCCGCTCCACGCCACGCAGCACTACGGCG...AGCCTTGGCTGTGGACAAAACAATCTTAAGTTGGGCAGCTTTCCTCAACGCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | TCGATGAGCCCGTCGCTTCACATTTGTGTTCTTGTCCCATTGGTCCTCTGTTGCCCCACTGGAGGGTCCTaGGGTGCCTGCGGAGTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: SMSPSLHICVLVPLVLCCPTGGS*GACGVR Trigger: ACGCACTCCGCAGGCACCCCAGGACCCTCCAGTGGG...GCAACAGAGGACCAATGGGACAAGAACACAAATGTGAAGCGACGGGCTCATCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | GGTCCTCCGTGCATCACCATGGCTGGGTGGTGGGGATGGCTTGGCAAATATGAATGCCCATTCCACTCATaGGTCCTGCAGGCCGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: GPPCITMAGWWGWLGKYECPFHS*VLQAGS Trigger: GGATCCGGCCTGCAGGACCCATGAGTGGAATGGGCA...TTCATATTTGCCAAGCCATCCCCACCACCCAGCCATGGTGATGCACGGAGGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | TCTCCAGAGGATCTTTGCATGGACAAAATTGTCTCGATGAGCCCGTCGCTTCACCGGGTTCCCGGGGAGTaGAGGTCGCCAGCTCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: SPEDLCMDKIVSMSPSLHRVPGE*RSPART Trigger: AGTGCGAGCTGGCGACCTGCACTCCCCGGGAACCCG...GTGAAGCGACGGGCTCATCGAGACAATTTTGTCCATGCAAAGATCCTCTGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | GGTCCTCCGTGCATCACCATGGCTGGGTGGTGGGGATGGCTTGGCAAATATGAAGAGGGTCTCCGTACATaGAAGCGGGAACCCCTACTC | + |
|
Preference number: 4 (lower is better) Translates to: GPPCITMAGWWGWLGKYEEGLRT*KREPLL Trigger: GAGTAGGGGTTCCCGCTTCCATGTACGGAGACCCTC...TTCATATTTGCCAAGCCATCCCCACCACCCAGCCATGGTGATGCACGGAGGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | AAGATTGTTTTGTCCACAGCCAAGGCTCAGAACTTGAAGAAGCCTTCGCTCTGTCGCCGTAGTGCTGCGTaGCGTGGAGCGGCGGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: KIVLSTAKAQNLKKPSLCRRSAA*RGAAAR Trigger: ACGGGCCGCCGCTCCACGCCACGCAGCACTACGGCG...ACAGAGCGAAGGCTTCTTCAAGTTCTGAGCCTTGGCTGTGGACAAAACAATCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | GATGAGCCCGTCGCTTCACATTTGTGTTCTTGTCCCATTGGTCCTCTGTTGCTTCCCACTGGAGGGTCCTaGGGTGCCTGCGGAGTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: DEPVASHLCSCPIGPLLLPTGGS*GACGVR Trigger: ACGCACTCCGCAGGCACCCCAGGACCCTCCAGTGGG...AAGCAACAGAGGACCAATGGGACAAGAACACAAATGTGAAGCGACGGGCTCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | CAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCATTGGCCCAACAGGTTAAGCATGGCCCCCACTaGAGGGTCCTGGGGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QVSISLRSMVLFSLAQQVKHGPH*RVLGCL Trigger: CAGGCACCCCAGGACCCTCCAGTGGGGGCCATGCTT...AACCTGTTGGGCCAATGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | GCCGCTGGAGTTAGTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATTGCCCATTCCACTCATaGGTCCTGCAGGCCGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: AAGVSDEVQTSVHLAPQHCPFHS*VLQAGS Trigger: GGATCCGGCCTGCAGGACCCATGAGTGGAATGGGCA...ATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATCACTAACTCCAGCGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR TCA 90 bp | TTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCATTGGCCCAAATCGGCCGCGGCGCGTaGGGGTCTCCGTACATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FRQVSISLRSMVLFSLAQIGRGA*GSPYME Trigger: TTCCATGTACGGAGACCCTCACGCGCCGCGGCCGAT...TTGGGCCAATGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | GCCGCTGGAGTTAGTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATAGATCCCATGCTGGCTaGCATGACATTGGGGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: AAGVSDEVQTSVHLAPQHRSHAG*HDIGVR Trigger: CCGCACCCCAATGTCATGCCAGCCAGCATGGGATCT...ATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATCACTAACTCCAGCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | GTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCAAAGCATGGCCCCCACTaGAGGGTCCTGGGGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VMRFRQVSISLRSMVLFSKHGPH*RVLGCL Trigger: CAGGCACCCCAGGACCCTCCAGTGGGGGCCATGCTT...TGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR TCA 90 bp | TGTGCGTTGAGGAAAGCTGCCCAACTTAAGATTGTTTTGTCCACAGCCAAGGCTATCGGCCGCGGCGCGTaGGGGTCTCCGTACATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CALRKAAQLKIVLSTAKAIGRGA*GSPYME Trigger: TTCCATGTACGGAGACCCTCACGCGCCGCGGCCGAT...AGCCTTGGCTGTGGACAAAACAATCTTAAGTTGGGCAGCTTTCCTCAACGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR TCA 90 bp | GATGAGCCCGTCGCTTCACATTTGTGTTCTTGTCCCATTGGTCCTCTGTTGCTTGTGGTCTCGCCAGGATaGAGGGTTGTGGTCGGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: DEPVASHLCSCPIGPLLLVVSPG*RVVVGE Trigger: CTCGCCGACCACAACCCTTCATCCTGGCGAGACCAC...AAGCAACAGAGGACCAATGGGACAAGAACACAAATGTGAAGCGACGGGCTCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR TCA 90 bp | GTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCAGTGGTCTCGCCAGGATaGAGGGTTGTGGTCGGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: VMRFRQVSISLRSMVLFSVVSPG*RVVVGE Trigger: CTCGCCGACCACAACCCTTCATCCTGGCGAGACCAC...TGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR TCA 90 bp | GATGAGCCCGTCGCTTCACATTTGTGTTCTTGTCCCATTGGTCCTCTGTTGCTTGCCTGCGGAGTGCGTTaGGGTTGCGTCATCGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: DEPVASHLCSCPIGPLLLACGVR*GCVIVV Trigger: GACCACGATGACGCAACCTCAACGCACTCCGCAGGC...AAGCAACAGAGGACCAATGGGACAAGAACACAAATGTGAAGCGACGGGCTCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | GTATGTGCGTTGAGGAAAGCTGCCCAACTTAAGATTGTTTTGTCCACAGCCAAGCGGGTTCCCGGGGAGTaGAGGTCGCCAGCTCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: VCALRKAAQLKIVLSTAKRVPGE*RSPART Trigger: AGTGCGAGCTGGCGACCTGCACTCCCCGGGAACCCG...CTTGGCTGTGGACAAAACAATCTTAAGTTGGGCAGCTTTCCTCAACGCACATAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | AGCCCGTCGCTTCACATTTGTGTTCTTGTCCCATTGGTCCTCTGTTGCTTGATGGGGGTGCCTGCGGAGTaGGTTGAGGTTGCGTCATCG | + |
|
Preference number: 4 (lower is better) Translates to: SPSLHICVLVPLVLCCLMGVPAE*VEVASS Trigger: CGATGACGCAACCTCAACGCACTCCGCAGGCACCCC...CATCAAGCAACAGAGGACCAATGGGACAAGAACACAAATGTGAAGCGACGGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | TCTCCAGAGGATCTTTGCATGGACAAAATTGTCTCGATGAGCCCGTCGCTTCACGGGGTGCCTGCGGAGTaGGTTGAGGTTGCGTCATCG | + |
|
Preference number: 4 (lower is better) Translates to: SPEDLCMDKIVSMSPSLHGVPAE*VEVASS Trigger: CGATGACGCAACCTCAACGCACTCCGCAGGCACCCC...GTGAAGCGACGGGCTCATCGAGACAATTTTGTCCATGCAAAGATCCTCTGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | GATGAGCCCGTCGCTTCACATTTGTGTTCTTGTCCCATTGGTCCTCTGTTGCTTGGGGTGCCTGCGGAGTaGGTTGAGGTTGCGTCATCG | + |
|
Preference number: 4 (lower is better) Translates to: DEPVASHLCSCPIGPLLLGVPAE*VEVASS Trigger: CGATGACGCAACCTCAACGCACTCCGCAGGCACCCC...AAGCAACAGAGGACCAATGGGACAAGAACACAAATGTGAAGCGACGGGCTCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | GCCGCTGGAGTTAGTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATCGTCGTCATCACCTGTaGCAGGTGAAGCTACGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AAGVSDEVQTSVHLAPQHRRHHL*QVKLRC Trigger: ACAGCGTAGCTTCACCTGGCACAGGTGATGACGACG...ATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATCACTAACTCCAGCGGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | GCCGCTGGAGTTAGTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATTACGGGTGTGTGAGATaGTGGAAGAGCCACGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AAGVSDEVQTSVHLAPQHYGCVR*WKSHAL Trigger: GAGAGCGTGGCTCTTCCAGCATCTCACACACCCGTA...ATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATCACTAACTCCAGCGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | ATGGACAAAATTGTCTCGATGAGCCCGTCGCTTCACATTTGTGTTCTTGTCCCACCCACTGGAGGGTCCTaGGGTGCCTGCGGAGTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: MDKIVSMSPSLHICVLVPPTGGS*GACGVR Trigger: ACGCACTCCGCAGGCACCCCAGGACCCTCCAGTGGG...TGGGACAAGAACACAAATGTGAAGCGACGGGCTCATCGAGACAATTTTGTCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | ATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCATTGAAGCATGGCCCCCACTaGAGGGTCCTGGGGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: MRFRQVSISLRSMVLFSLKHGPH*RVLGCL Trigger: CAGGCACCCCAGGACCCTCCAGTGGGGGCCATGCTT...CAATGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | GCCGCTGGAGTTAGTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGGTGTGTGAGATGCTaGAAGAGCCACGCTCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: AAGVSDEVQTSVHLAPQHGCVRC*KSHALM Trigger: CATGAGAGCGTGGCTCTTCCAGCATCTCACACACCC...ATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATCACTAACTCCAGCGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR TCA 90 bp | CCAGAGGATCTTTGCATGGACAAAATTGTCTCGATGAGCCCGTCGCTTCACATTGCCTGCGGAGTGCGTTaGGGTTGCGTCATCGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PEDLCMDKIVSMSPSLHIACGVR*GCVIVV Trigger: GACCACGATGACGCAACCTCAACGCACTCCGCAGGC...AATGTGAAGCGACGGGCTCATCGAGACAATTTTGTCCATGCAAAGATCCTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR TCA 90 bp | GTTAGTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTGCCTGCGGAGTGCGTTaGGGTTGCGTCATCGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VSDEVQTSVHLAPQHGSFACGVR*GCVIVV Trigger: GACCACGATGACGCAACCTCAACGCACTCCGCAGGC...AAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATCACTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR TCA 90 bp | TCGATGAGCCCGTCGCTTCACATTTGTGTTCTTGTCCCATTGGTCCTCTGTTGCAAGGGTACGGGTGTGTaGGATGCTGGAAGAGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: SMSPSLHICVLVPLVLCCKGTGV*DAGRAT Trigger: CGTGGCTCTTCCAGCATCTCACACACCCGTACCCTT...GCAACAGAGGACCAATGGGACAAGAACACAAATGTGAAGCGACGGGCTCATCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR TCA 90 bp | CAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCATTGGCCCAACAGGTTAAGCTCCCCATGGGCTaGCCCTCTGGACTATACGCT | + |
|
Preference number: 4 (lower is better) Translates to: QVSISLRSMVLFSLAQQVKLPMG*PSGLYA Trigger: AGCGTATAGTCCAGAGGGTCAGCCCATGGGGAGCTT...AACCTGTTGGGCCAATGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | CAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCATTGGCCCAACAGGTTAGATCCCATGCTGGCTaGCATGACATTGGGGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: QVSISLRSMVLFSLAQQVRSHAG*HDIGVR Trigger: CCGCACCCCAATGTCATGCCAGCCAGCATGGGATCT...AACCTGTTGGGCCAATGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | GATGAGCCCGTCGCTTCACATTTGTGTTCTTGTCCCATTGGTCCTCTGTTGCTTTGCCCATTCCACTCATaGGTCCTGCAGGCCGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: DEPVASHLCSCPIGPLLLCPFHS*VLQAGS Trigger: GGATCCGGCCTGCAGGACCCATGAGTGGAATGGGCA...AAGCAACAGAGGACCAATGGGACAAGAACACAAATGTGAAGCGACGGGCTCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR TCA 90 bp | ATGGACAAAATTGTCTCGATGAGCCCGTCGCTTCACATTTGTGTTCTTGTCCCAGCCTGCGGAGTGCGTTaGGGTTGCGTCATCGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: MDKIVSMSPSLHICVLVPACGVR*GCVIVV Trigger: GACCACGATGACGCAACCTCAACGCACTCCGCAGGC...TGGGACAAGAACACAAATGTGAAGCGACGGGCTCATCGAGACAATTTTGTCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR TCA 90 bp | TTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCATTGGCCCAAAAGCTCCCCATGGGCTaGCCCTCTGGACTATACGCT | + |
|
Preference number: 4 (lower is better) Translates to: FRQVSISLRSMVLFSLAQKLPMG*PSGLYA Trigger: AGCGTATAGTCCAGAGGGTCAGCCCATGGGGAGCTT...TTGGGCCAATGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | GTTAGTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCGTAGTCCCCTGGCATaGTCTGCAAACCTGCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VSDEVQTSVHLAPQHGSFRSPLA*SANLQA Trigger: GGCCTGCAGGTTTGCAGAGCATGCCAGGGGACTACG...AAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATCACTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 |
||
| CDS-3UTR CCA 90 bp | GCCGCTGGAGTTAGTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTCGGCGAGATTTGTaGAGGAGCCTGAAAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AAGVSDEVQTSVHLAPQHGRRDL*RSLKVL Trigger: AAGAACTTTCAGGCTCCTCCACAAATCTCGCCGACC...ATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATCACTAACTCCAGCGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | TATCCCCCAAGCTTTGAGTTCCTGATAGAATCCTACTTATGGTGCAACGACCATAAGCATGGCCCCCACTaGAGGGTCCTGGGGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: YPPSFEFLIESYLWCNDHKHGPH*RVLGCL Trigger: CAGGCACCCCAGGACCCTCCAGTGGGGGCCATGCTT...ATGGTCGTTGCACCATAAGTAGGATTCTATCAGGAACTCAAAGCTTGGGGGATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR TCA 90 bp | TATCCCCCAAGCTTTGAGTTCCTGATAGAATCCTACTTATGGTGCAACGACCATGTGGTCTCGCCAGGATaGAGGGTTGTGGTCGGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: YPPSFEFLIESYLWCNDHVVSPG*RVVVGE Trigger: CTCGCCGACCACAACCCTTCATCCTGGCGAGACCAC...ATGGTCGTTGCACCATAAGTAGGATTCTATCAGGAACTCAAAGCTTGGGGGATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR TCA 90 bp | ATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCATTGAAGGGTACGGGTGTGTaGGATGCTGGAAGAGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: MRFRQVSISLRSMVLFSLKGTGV*DAGRAT Trigger: CGTGGCTCTTCCAGCATCTCACACACCCGTACCCTT...CAATGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR TCA 90 bp | GATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCATTAAGCTCCCCATGGGCTaGCCCTCTGGACTATACGCT | + |
|
Preference number: 4 (lower is better) Translates to: DEVQTSVHLAPQHGSFLIKLPMG*PSGLYA Trigger: AGCGTATAGTCCAGAGGGTCAGCCCATGGGGAGCTT...AATGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR TCA 90 bp | AATTGTCTCGATGAGCCCGTCGCTTCACATTTGTGTTCTTGTCCCATTGGTCCTAAGCTCCCCATGGGCTaGCCCTCTGGACTATACGCT | + |
|
Preference number: 4 (lower is better) Translates to: NCLDEPVASHLCSCPIGPKLPMG*PSGLYA Trigger: AGCGTATAGTCCAGAGGGTCAGCCCATGGGGAGCTT...AGGACCAATGGGACAAGAACACAAATGTGAAGCGACGGGCTCATCGAGACAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR TCA 90 bp | AGCCCGTCGCTTCACATTTGTGTTCTTGTCCCATTGGTCCTCTGTTGCTTGATGTGTGGGGCTCTGTGCTaGCATAGTCATTCCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SPSLHICVLVPLVLCCLMCGALC*HSHSRV Trigger: CACCCTGGAATGACTATGTCAGCACAGAGCCCCACA...CATCAAGCAACAGAGGACCAATGGGACAAGAACACAAATGTGAAGCGACGGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 |
||
| CDS-3UTR GCA 90 bp | GCATGGTTCTTTTCTCATTGGCCCAACAGGTTTAAAATATACCACAGTCTCTTCCGGGTTCCCGGGGAGTaGAGGTCGCCAGCTCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: AWFFSHWPNRFKIYHSLFRVPGE*RSPART Trigger: AGTGCGAGCTGGCGACCTGCACTCCCCGGGAACCCG...GAAGAGACTGTGGTATATTTTAAACCTGTTGGGCCAATGAGAAAAGAACCATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | AATTGTCTCGATGAGCCCGTCGCTTCACATTTGTGTTCTTGTCCCATTGGTCCTTTTTCGGCGCGAACCTaGTTGGCGAAGACCGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: NCLDEPVASHLCSCPIGPFSART*LAKTAM Trigger: CATCGCGGTCTTCGCCAAGCAGGTTCGCGCCGAAAA...AGGACCAATGGGACAAGAACACAAATGTGAAGCGACGGGCTCATCGAGACAATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | TCTCCAGAGGATCTTTGCATGGACAAAATTGTCTCGATGAGCCCGTCGCTTCACCGTCGTCATCACCTGTaGCAGGTGAAGCTACGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SPEDLCMDKIVSMSPSLHRRHHL*QVKLRC Trigger: ACAGCGTAGCTTCACCTGGCACAGGTGATGACGACG...GTGAAGCGACGGGCTCATCGAGACAATTTTGTCCATGCAAAGATCCTCTGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | GATGAGCCCGTCGCTTCACATTTGTGTTCTTGTCCCATTGGTCCTCTGTTGCTTTACGGGTGTGTGAGATaGTGGAAGAGCCACGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: DEPVASHLCSCPIGPLLLYGCVR*WKSHAL Trigger: GAGAGCGTGGCTCTTCCAGCATCTCACACACCCGTA...AAGCAACAGAGGACCAATGGGACAAGAACACAAATGTGAAGCGACGGGCTCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | TTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCATTGGCCCAACTCTGGACTATACGCTaGTCCTTGGCTCACTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: FRQVSISLRSMVLFSLAQLWTIR*SLAHCS Trigger: CGAGCAGTGAGCCAAGGAGCAGCGTATAGTCCAGAG...TTGGGCCAATGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | AGTTCAGAGAGTCTTAAAATAGTTTTTGCGTGTGTTTCCTTCTTCCTTGAGTTCCGCCGTAGTGCTGCGTaGCGTGGAGCGGCGGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SSESLKIVFACVSFFLEFRRSAA*RGAAAR Trigger: ACGGGCCGCCGCTCCACGCCACGCAGCACTACGGCG...GAACTCAAGGAAGAAGGAAACACACGCAAAAACTATTTTAAGACTCTCTGAACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | GTTAGTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTAGATCCCATGCTGGCTaGCATGACATTGGGGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VSDEVQTSVHLAPQHGSFRSHAG*HDIGVR Trigger: CCGCACCCCAATGTCATGCCAGCCAGCATGGGATCT...AAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATCACTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | ATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCATTGAGATCCCATGCTGGCTaGCATGACATTGGGGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: MRFRQVSISLRSMVLFSLRSHAG*HDIGVR Trigger: CCGCACCCCAATGTCATGCCAGCCAGCATGGGATCT...CAATGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | TACCACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAAGACAGTCATTCTCCCACTGGAGGGTCCTaGGGTGCCTGCGGAGTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: YHSLFWIVNSLMNQDSHSPTGGS*GACGVR Trigger: ACGCACTCCGCAGGCACCCCAGGACCCTCCAGTGGG...AGAATGACTGTCTTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTGGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | GTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCAGGGTGTGTGAGATGCTaGAAGAGCCACGCTCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: VMRFRQVSISLRSMVLFSGCVRC*KSHALM Trigger: CATGAGAGCGTGGCTCTTCCAGCATCTCACACACCC...TGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | TTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCATTGGCCCAACATGGGCTGACCCTCTaGACTATACGCTGCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FRQVSISLRSMVLFSLAQHGLTL*TIRCSL Trigger: CAAGGAGCAGCGTATAGTCCAGAGGGTCAGCCCATG...TTGGGCCAATGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | AGCCCGTCGCTTCACATTTGTGTTCTTGTCCCATTGGTCCTCTGTTGCTTGATGGGGAGGAGTGTAACTTaGCTGGGCCATACCCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPSLHICVLVPLVLCCLMGRSVT*LGHTHS Trigger: GGAATGGGTATGGCCCAGCCAAGTTACACTCCTCCC...CATCAAGCAACAGAGGACCAATGGGACAAGAACACAAATGTGAAGCGACGGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 |
||
| CDS-3UTR CCA 90 bp | TCGATGAGCCCGTCGCTTCACATTTGTGTTCTTGTCCCATTGGTCCTCTGTTGCGCTGGGTGGTGGGGATaGCTTGGCAAATATGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: SMSPSLHICVLVPLVLCCAGWWG*LGKYEC Trigger: GCATTCATATTTGCCAAGCCATCCCCACCACCCAGC...GCAACAGAGGACCAATGGGACAAGAACACAAATGTGAAGCGACGGGCTCATCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 |
||
| CDS-3UTR TCA 90 bp | CTTCACATTTGTGTTCTTGTCCCATTGGTCCTCTGTTGCTTGATGAAAAATGACATCGGCCGCGGCGCGTaGGGGTCTCCGTACATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LHICVLVPLVLCCLMKNDIGRGA*GSPYME Trigger: TTCCATGTACGGAGACCCTCACGCGCCGCGGCCGAT...GTCATTTTTCATCAAGCAACAGAGGACCAATGGGACAAGAACACAAATGTGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR TCA 90 bp | GTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCATTTTCAAGGCGTCGTTaGCAGCAGATCCCATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VMRFRQVSISLRSMVLFSFSRRR*QQIPCW Trigger: CCAGCATGGGATCTGCTGTCAACGACGCCTTGAAAA...TGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR TCA 90 bp | AGCCCGTCGCTTCACATTTGTGTTCTTGTCCCATTGGTCCTCTGTTGCTTGATGTTTTCAAGGCGTCGTTaGCAGCAGATCCCATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPSLHICVLVPLVLCCLMFSRRR*QQIPCW Trigger: CCAGCATGGGATCTGCTGTCAACGACGCCTTGAAAA...CATCAAGCAACAGAGGACCAATGGGACAAGAACACAAATGTGAAGCGACGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR TCA 90 bp | GGTCCTCCGTGCATCACCATGGCTGGGTGGTGGGGATGGCTTGGCAAATATGAAAAGTTCTTCATGATCTaGCTTGGAGCTTCCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GPPCITMAGWWGWLGKYEKFFMI*LGASIS Trigger: AGAGATGGAAGCTCCAAGTCAGATCATGAAGAACTT...TTCATATTTGCCAAGCCATCCCCACCACCCAGCCATGGTGATGCACGGAGGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR TCA 90 bp | TATAACTCTCGGAGTCTTTCTCCAGAGGATCTTTGCATGGACAAAATTGTCTCGGTGGTCTCGCCAGGATaGAGGGTTGTGGTCGGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: YNSRSLSPEDLCMDKIVSVVSPG*RVVVGE Trigger: CTCGCCGACCACAACCCTTCATCCTGGCGAGACCAC...CGAGACAATTTTGTCCATGCAAAGATCCTCTGGAGAAAGACTCCGAGAGTTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR TCA 90 bp | TATGCTACAGTAGTTATAACTCTCGGAGTCTTTCTCCAGAGGATCTTTGCATGGGCCTGCGGAGTGCGTTaGGGTTGCGTCATCGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: YATVVITLGVFLQRIFAWACGVR*GCVIVV Trigger: GACCACGATGACGCAACCTCAACGCACTCCGCAGGC...CCATGCAAAGATCCTCTGGAGAAAGACTCCGAGAGTTATAACTACTGTAGCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | GTATGTGCGTTGAGGAAAGCTGCCCAACTTAAGATTGTTTTGTCCACAGCCAAGTTTTCGGCGCGAACCTaGTTGGCGAAGACCGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: VCALRKAAQLKIVLSTAKFSART*LAKTAM Trigger: CATCGCGGTCTTCGCCAAGCAGGTTCGCGCCGAAAA...CTTGGCTGTGGACAAAACAATCTTAAGTTGGGCAGCTTTCCTCAACGCACATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | AAGATTGTTTTGTCCACAGCCAAGGCTCAGAACTTGAAGAAGCCTTCGCTCTGTTTTTCGGCGCGAACCTaGTTGGCGAAGACCGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: KIVLSTAKAQNLKKPSLCFSART*LAKTAM Trigger: CATCGCGGTCTTCGCCAAGCAGGTTCGCGCCGAAAA...ACAGAGCGAAGGCTTCTTCAAGTTCTGAGCCTTGGCTGTGGACAAAACAATCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | TCCGCAGCATGGTTCTTTTCTCATTGGCCCAACAGGTTTAAAATATACCACAGTGGGGTGCCTGCGGAGTaGGTTGAGGTTGCGTCATCG | + |
|
Preference number: 4 (lower is better) Translates to: SAAWFFSHWPNRFKIYHSGVPAE*VEVASS Trigger: CGATGACGCAACCTCAACGCACTCCGCAGGCACCCC...ACTGTGGTATATTTTAAACCTGTTGGGCCAATGAGAAAAGAACCATGCTGCGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | ATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCATTGCGTCGTCATCACCTGTaGCAGGTGAAGCTACGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: MRFRQVSISLRSMVLFSLRRHHL*QVKLRC Trigger: ACAGCGTAGCTTCACCTGGCACAGGTGATGACGACG...CAATGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | ATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCATTGTACGGGTGTGTGAGATaGTGGAAGAGCCACGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: MRFRQVSISLRSMVLFSLYGCVR*WKSHAL Trigger: GAGAGCGTGGCTCTTCCAGCATCTCACACACCCGTA...CAATGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | TTGAGGAAAGCTGCCCAACTTAAGATTGTTTTGTCCACAGCCAAGGCTCAGAACCATGCTCTGCAAACCTaGAGGCCGGATCCCCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: LRKAAQLKIVLSTAKAQNHALQT*RPDPHV Trigger: CACATGGGGATCCGGCCTGCAGGTTTGCAGAGCATG...GTTCTGAGCCTTGGCTGTGGACAAAACAATCTTAAGTTGGGCAGCTTTCCTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 |
||
| CDS-3UTR GCA 90 bp | ATGGACAAAATTGTCTCGATGAGCCCGTCGCTTCACATTTGTGTTCTTGTCCCACATGCTCTGCAAACCTaGAGGCCGGATCCCCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: MDKIVSMSPSLHICVLVPHALQT*RPDPHV Trigger: CACATGGGGATCCGGCCTGCAGGTTTGCAGAGCATG...TGGGACAAGAACACAAATGTGAAGCGACGGGCTCATCGAGACAATTTTGTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 |
||
| CDS-3UTR GCA 90 bp | GAAAAGAGGACCCCATGGACATACAATACCAATTCCACAGCAGATCTGATACTAGTAGGGGGTCCTCCGTaGATCACCATGGCTGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EKRTPWTYNTNSTADLILVGGPP*ITMAGW Trigger: CCACCCAGCCATGGTGATGCACGGAGGACCCCCTAC...TAGTATCAGATCTGCTGTGGAATTGGTATTGTATGTCCATGGGGTCCTCTTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 |
||
| CDS-3UTR CCA 90 bp | GGATCTTTGCATGGACAAAATTGTCTCGATGAGCCCGTCGCTTCACATTTGTGTGAGGGTCTCCGTACATaGAAGCGGGAACCCCTACTC | + |
|
Preference number: 4 (lower is better) Translates to: GSLHGQNCLDEPVASHLCEGLRT*KREPLL Trigger: GAGTAGGGGTTCCCGCTTCCATGTACGGAGACCCTC...ACACAAATGTGAAGCGACGGGCTCATCGAGACAATTTTGTCCATGCAAAGATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | AAACAATTAAAAGACCGAACTCTGTACGAAGTTTGTTACAGTATTCTCTTGCTCCGCCGTAGTGCTGCGTaGCGTGGAGCGGCGGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: KQLKDRTLYEVCYSILLLRRSAA*RGAAAR Trigger: ACGGGCCGCCGCTCCACGCCACGCAGCACTACGGCG...GAGCAAGAGAATACTGTAACAAACTTCGTACAGAGTTCGGTCTTTTAATTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | ATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCATTGCATGGGCTGACCCTCTaGACTATACGCTGCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: MRFRQVSISLRSMVLFSLHGLTL*TIRCSL Trigger: CAAGGAGCAGCGTATAGTCCAGAGGGTCAGCCCATG...CAATGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | TGTGCGTTGAGGAAAGCTGCCCAACTTAAGATTGTTTTGTCCACAGCCAAGGCTCATGGGCTGACCCTCTaGACTATACGCTGCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CALRKAAQLKIVLSTAKAHGLTL*TIRCSL Trigger: CAAGGAGCAGCGTATAGTCCAGAGGGTCAGCCCATG...AGCCTTGGCTGTGGACAAAACAATCTTAAGTTGGGCAGCTTTCCTCAACGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | AATTGTCTCGATGAGCCCGTCGCTTCACATTTGTGTTCTTGTCCCATTGGTCCTGGGAGGAGTGTAACTTaGCTGGGCCATACCCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: NCLDEPVASHLCSCPIGPGRSVT*LGHTHS Trigger: GGAATGGGTATGGCCCAGCCAAGTTACACTCCTCCC...AGGACCAATGGGACAAGAACACAAATGTGAAGCGACGGGCTCATCGAGACAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 |
||
| CDS-3UTR CCA 90 bp | TGTGCGTTGAGGAAAGCTGCCCAACTTAAGATTGTTTTGTCCACAGCCAAGGCTATCACCATGGCTGGGTaGTGGGGATGGCTTGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: CALRKAAQLKIVLSTAKAITMAG*WGWLGK Trigger: TTTGCCAAGCCATCCCCACCACCCAGCCATGGTGAT...AGCCTTGGCTGTGGACAAAACAATCTTAAGTTGGGCAGCTTTCCTCAACGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 |
||
| CDS-3UTR CCA 90 bp | TATAACTCTCGGAGTCTTTCTCCAGAGGATCTTTGCATGGACAAAATTGTCTCGCTCCGTGCATCACCATaGCTGGGTGGTGGGGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: YNSRSLSPEDLCMDKIVSLRASP*LGGGDG Trigger: GCCATCCCCACCACCCAGCCATGGTGATGCACGGAG...CGAGACAATTTTGTCCATGCAAAGATCCTCTGGAGAAAGACTCCGAGAGTTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 |
||
| CDS-3UTR TCA 90 bp | ATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCATTGTTTTCAAGGCGTCGTTaGCAGCAGATCCCATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MRFRQVSISLRSMVLFSLFSRRR*QQIPCW Trigger: CCAGCATGGGATCTGCTGTCAACGACGCCTTGAAAA...CAATGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR TCA 90 bp | TACCACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAAGACAGTCATTCTGTGGTCTCGCCAGGATaGAGGGTTGTGGTCGGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: YHSLFWIVNSLMNQDSHSVVSPG*RVVVGE Trigger: CTCGCCGACCACAACCCTTCATCCTGGCGAGACCAC...AGAATGACTGTCTTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR TCA 90 bp | GATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCATTGCTCACTGCTCGATTTaGCTGGTCAATCATGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DEVQTSVHLAPQHGSFLIAHCSI*LVNHGL Trigger: CAGCCCATGATTGACCAGTCAAATCGAGCAGTGAGC...AATGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | AGTTCAGAGAGTCTTAAAATAGTTTTTGCGTGTGTTTCCTTCTTCCTTGAGTTCCGGGTTCCCGGGGAGTaGAGGTCGCCAGCTCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: SSESLKIVFACVSFFLEFRVPGE*RSPART Trigger: AGTGCGAGCTGGCGACCTGCACTCCCCGGGAACCCG...GAACTCAAGGAAGAAGGAAACACACGCAAAAACTATTTTAAGACTCTCTGAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | AAAATATACCACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAAGACAGTCGGGTTCCCGGGGAGTaGAGGTCGCCAGCTCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: KIYHSLFWIVNSLMNQDSRVPGE*RSPART Trigger: AGTGCGAGCTGGCGACCTGCACTCCCCGGGAACCCG...ACTGTCTTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTGGTATATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | AGACCGAACTCTGTACGAAGTTTGTTACAGTATTCTCTTGCTCCTTTTTATCCCGGGGTGCCTGCGGAGTaGGTTGAGGTTGCGTCATCG | + |
|
Preference number: 4 (lower is better) Translates to: RPNSVRSLLQYSLAPFYPGVPAE*VEVASS Trigger: CGATGACGCAACCTCAACGCACTCCGCAGGCACCCC...GGGATAAAAAGGAGCAAGAGAATACTGTAACAAACTTCGTACAGAGTTCGGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | TTGAGGAAAGCTGCCCAACTTAAGATTGTTTTGTCCACAGCCAAGGCTCAGAACCGTCGTCATCACCTGTaGCAGGTGAAGCTACGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LRKAAQLKIVLSTAKAQNRRHHL*QVKLRC Trigger: ACAGCGTAGCTTCACCTGGCACAGGTGATGACGACG...GTTCTGAGCCTTGGCTGTGGACAAAACAATCTTAAGTTGGGCAGCTTTCCTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | CCGCCAACATTGGGATCTACAGAATTTAACATTGTGGGGCTCTGTGCTGACATATACGGGTGTGTGAGATaGTGGAAGAGCCACGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PPTLGSTEFNIVGLCADIYGCVR*WKSHAL Trigger: GAGAGCGTGGCTCTTCCAGCATCTCACACACCCGTA...TATGTCAGCACAGAGCCCCACAATGTTAAATTCTGTAGATCCCAATGTTGGCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | GATGAGCCCGTCGCTTCACATTTGTGTTCTTGTCCCATTGGTCCTCTGTTGCTTCCATGCCCATATTCATaGCCATTCCACTCATGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: DEPVASHLCSCPIGPLLLPCPYS*PFHSWV Trigger: GACCCATGAGTGGAATGGGCATGAATATGGGCATGG...AAGCAACAGAGGACCAATGGGACAAGAACACAAATGTGAAGCGACGGGCTCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | GCCGCTGGAGTTAGTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATCAATCACGAGGTCAATaGGCATTTTTCCCTTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: AAGVSDEVQTSVHLAPQHQSRGQ*AFFPSN Trigger: GTTTGAAGGGAAAAATGCCCATTGACCTCGTGATTG...ATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATCACTAACTCCAGCGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | GGATCTTTGCATGGACAAAATTGTCTCGATGAGCCCGTCGCTTCACATTTGTGTCATGGGCTGACCCTCTaGACTATACGCTGCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GSLHGQNCLDEPVASHLCHGLTL*TIRCSL Trigger: CAAGGAGCAGCGTATAGTCCAGAGGGTCAGCCCATG...ACACAAATGTGAAGCGACGGGCTCATCGAGACAATTTTGTCCATGCAAAGATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | ATTCTAGCCGCTGGAGTTAGTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCATACCCATTCCCATTaGACCACCCTGAGAAACGTA | + |
|
Preference number: 4 (lower is better) Translates to: ILAAGVSDEVQTSVHLAPHTHSH*TTLRNV Trigger: TACGTTTCTCAGGGTGGTCCAATGGGAATGGGTATG...CGGAGCGAGATGGACACTTGTCTGAACCTCATCACTAACTCCAGCGGCTAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 |
||
| CDS-3UTR CCA 90 bp | TTGAGGAAAGCTGCCCAACTTAAGATTGTTTTGTCCACAGCCAAGGCTCAGAACATCACCATGGCTGGGTaGTGGGGATGGCTTGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LRKAAQLKIVLSTAKAQNITMAG*WGWLGK Trigger: TTTGCCAAGCCATCCCCACCACCCAGCCATGGTGAT...GTTCTGAGCCTTGGCTGTGGACAAAACAATCTTAAGTTGGGCAGCTTTCCTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 |
||
| CDS-3UTR CCA 90 bp | AGCCCGTCGCTTCACATTTGTGTTCTTGTCCCATTGGTCCTCTGTTGCTTGATGCTATACGCTGCTCCTTaGCTCACTGCTCGATTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SPSLHICVLVPLVLCCLMLYAAP*LTARFD Trigger: GTCAAATCGAGCAGTGAGCCAAGGAGCAGCGTATAG...CATCAAGCAACAGAGGACCAATGGGACAAGAACACAAATGTGAAGCGACGGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110908.9 |
||
| CDS-3UTR TCA 90 bp | ATAATCACAGCTGTCTGGAGTTTCATATTAAGTGTCACATCTGGTCAAAGTTCAATCGGCCGCGGCGCGTaGGGGTCTCCGTACATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: IITAVWSFILSVTSGQSSIGRGA*GSPYME Trigger: TTCCATGTACGGAGACCCTCACGCGCCGCGGCCGAT...TGAACTTTGACCAGATGTGACACTTAATATGAAACTCCAGACAGCTGTGATTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR TCA 90 bp | AGCCCGTCGCTTCACATTTGTGTTCTTGTCCCATTGGTCCTCTGTTGCTTGATGTGCTCCTTGGCTCACTaGAGGATCAAGAAGAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: SPSLHICVLVPLVLCCLMCSLAH*RIKKKT Trigger: GGTTTTCTTCTTGATCCTTCAGTGAGCCAAGGAGCA...CATCAAGCAACAGAGGACCAATGGGACAAGAACACAAATGTGAAGCGACGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028639.13 ENSMUST00000110906.9 ENSMUST00000110907.8 |
||
| CDS-3UTR TCA 90 bp | GTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCATGCTCCTTGGCTCACTaGAGGATCAAGAAGAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: VMRFRQVSISLRSMVLFSCSLAH*RIKKKT Trigger: GGTTTTCTTCTTGATCCTTCAGTGAGCCAAGGAGCA...TGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028639.13 ENSMUST00000110906.9 ENSMUST00000110907.8 |
||
| CDS-3UTR GCA 90 bp | GATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCATTTCTAACCCATCGCCTTaGTCACTGCTGTTGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DEVQTSVHLAPQHGSFLISNPSP*SLLLSP Trigger: TGGAGACAACAGCAGTGAGCAAGGCGATGGGTTAGA...AATGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | TGTGCGTTGAGGAAAGCTGCCCAACTTAAGATTGTTTTGTCCACAGCCAAGGCTTCTAACCCATCGCCTTaGTCACTGCTGTTGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CALRKAAQLKIVLSTAKASNPSP*SLLLSP Trigger: TGGAGACAACAGCAGTGAGCAAGGCGATGGGTTAGA...AGCCTTGGCTGTGGACAAAACAATCTTAAGTTGGGCAGCTTTCCTCAACGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | TACCACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAAGACAGTCATTCTTCCCCTGGCATGCTCTaGAAACCTGCAGGCCGGATC | + |
|
Preference number: 4 (lower is better) Translates to: YHSLFWIVNSLMNQDSHSSPGML*KPAGRI Trigger: GATCCGGCCTGCAGGTTTGCAGAGCATGCCAGGGGA...AGAATGACTGTCTTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 |
||
| CDS-3UTR GCA 90 bp | GTTATAACTCTCGGAGTCTTTCTCCAGAGGATCTTTGCATGGACAAAATTGTCTCGTAGTCCCCTGGCATaGTCTGCAAACCTGCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VITLGVFLQRIFAWTKLSRSPLA*SANLQA Trigger: GGCCTGCAGGTTTGCAGAGCATGCCAGGGGACTACG...AGACAATTTTGTCCATGCAAAGATCCTCTGGAGAAAGACTCCGAGAGTTATAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 |
||
| CDS-3UTR GCA 90 bp | CCAGAGGATCTTTGCATGGACAAAATTGTCTCGATGAGCCCGTCGCTTCACATTCCATGCCCATATTCATaGCCATTCCACTCATGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PEDLCMDKIVSMSPSLHIPCPYS*PFHSWV Trigger: GACCCATGAGTGGAATGGGCATGAATATGGGCATGG...AATGTGAAGCGACGGGCTCATCGAGACAATTTTGTCCATGCAAAGATCCTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | TATGCTACAGTAGTTATAACTCTCGGAGTCTTTCTCCAGAGGATCTTTGCATGGAGATCCCATGCTGGCTaGCATGACATTGGGGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: YATVVITLGVFLQRIFAWRSHAG*HDIGVR Trigger: CCGCACCCCAATGTCATGCCAGCCAGCATGGGATCT...CCATGCAAAGATCCTCTGGAGAAAGACTCCGAGAGTTATAACTACTGTAGCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | AAAATAGTTTTTGCGTGTGTTTCCTTCTTCCTTGAGTTCCCTTATACTATTGGGAAGCATGGCCCCCACTaGAGGGTCCTGGGGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KIVFACVSFFLEFPYTIGKHGPH*RVLGCL Trigger: CAGGCACCCCAGGACCCTCCAGTGGGGGCCATGCTT...CCCAATAGTATAAGGGAACTCAAGGAAGAAGGAAACACACGCAAAAACTATTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | GGATCTTTGCATGGACAAAATTGTCTCGATGAGCCCGTCGCTTCACATTTGTGTACACAAAGCTCCCCATaGGCTGACCCTCTGGACTAT | + |
|
Preference number: 4 (lower is better) Translates to: GSLHGQNCLDEPVASHLCTQSSP*ADPLDY Trigger: ATAGTCCAGAGGGTCAGCCCATGGGGAGCTTTGTGT...ACACAAATGTGAAGCGACGGGCTCATCGAGACAATTTTGTCCATGCAAAGATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | GTATGTGCGTTGAGGAAAGCTGCCCAACTTAAGATTGTTTTGTCCACAGCCAAGACACAAAGCTCCCCATaGGCTGACCCTCTGGACTAT | + |
|
Preference number: 4 (lower is better) Translates to: VCALRKAAQLKIVLSTAKTQSSP*ADPLDY Trigger: ATAGTCCAGAGGGTCAGCCCATGGGGAGCTTTGTGT...CTTGGCTGTGGACAAAACAATCTTAAGTTGGGCAGCTTTCCTCAACGCACATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | GGATCTTTGCATGGACAAAATTGTCTCGATGAGCCCGTCGCTTCACATTTGTGTGCTGGGTGGTGGGGATaGCTTGGCAAATATGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: GSLHGQNCLDEPVASHLCAGWWG*LGKYEC Trigger: GCATTCATATTTGCCAAGCCATCCCCACCACCCAGC...ACACAAATGTGAAGCGACGGGCTCATCGAGACAATTTTGTCCATGCAAAGATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 |
||
| CDS-3UTR CCA 90 bp | GACCCCATGGACATACAATACCAATTCCACAGCAGATCTGATACTAGCAAAAACATAGTCATTCCAGGGTaGGTAGGGGGTCCTCCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: DPMDIQYQFHSRSDTSKNIVIPG*VGGPPC Trigger: GCACGGAGGACCCCCTACCCACCCTGGAATGACTAT...GTTTTTGCTAGTATCAGATCTGCTGTGGAATTGGTATTGTATGTCCATGGGGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 |
||
| CDS-3UTR TCA 90 bp | ATTCTAGCCGCTGGAGTTAGTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGAAGTTCTTCATGATCTaGCTTGGAGCTTCCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ILAAGVSDEVQTSVHLAPKFFMI*LGASIS Trigger: AGAGATGGAAGCTCCAAGTCAGATCATGAAGAACTT...CGGAGCGAGATGGACACTTGTCTGAACCTCATCACTAACTCCAGCGGCTAGAAT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR TCA 90 bp | CTTAGTCCCTATGTTTATGCTACAGTAGTTATAACTCTCGGAGTCTTTCTCCAGAAGGGTACGGGTGTGTaGGATGCTGGAAGAGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: LSPYVYATVVITLGVFLQKGTGV*DAGRAT Trigger: CGTGGCTCTTCCAGCATCTCACACACCCGTACCCTT...CTGGAGAAAGACTCCGAGAGTTATAACTACTGTAGCATAAACATAGGGACTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR TCA 90 bp | GTTATAACTCTCGGAGTCTTTCTCCAGAGGATCTTTGCATGGACAAAATTGTCTAAGGGTACGGGTGTGTaGGATGCTGGAAGAGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: VITLGVFLQRIFAWTKLSKGTGV*DAGRAT Trigger: CGTGGCTCTTCCAGCATCTCACACACCCGTACCCTT...AGACAATTTTGTCCATGCAAAGATCCTCTGGAGAAAGACTCCGAGAGTTATAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR TCA 90 bp | CTTCACATTTGTGTTCTTGTCCCATTGGTCCTCTGTTGCTTGATGAAAAATGACAAGGGTACGGGTGTGTaGGATGCTGGAAGAGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: LHICVLVPLVLCCLMKNDKGTGV*DAGRAT Trigger: CGTGGCTCTTCCAGCATCTCACACACCCGTACCCTT...GTCATTTTTCATCAAGCAACAGAGGACCAATGGGACAAGAACACAAATGTGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR TCA 90 bp | TGTTTATGCTACAGTAGTTATAACTCTCGGAGTCTTTCTCCAGAGGATCTTTGCAAGGGTACGGGTGTGTaGGATGCTGGAAGAGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: CLCYSSYNSRSLSPEDLCKGTGV*DAGRAT Trigger: CGTGGCTCTTCCAGCATCTCACACACCCGTACCCTT...GCAAAGATCCTCTGGAGAAAGACTCCGAGAGTTATAACTACTGTAGCATAAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | CTTCACATTTGTGTTCTTGTCCCATTGGTCCTCTGTTGCTTGATGAAAAATGACTTTTCGGCGCGAACCTaGTTGGCGAAGACCGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: LHICVLVPLVLCCLMKNDFSART*LAKTAM Trigger: CATCGCGGTCTTCGCCAAGCAGGTTCGCGCCGAAAA...GTCATTTTTCATCAAGCAACAGAGGACCAATGGGACAAGAACACAAATGTGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | AGTTCAGAGAGTCTTAAAATAGTTTTTGCGTGTGTTTCCTTCTTCCTTGAGTTCGGGGTGCCTGCGGAGTaGGTTGAGGTTGCGTCATCG | + |
|
Preference number: 4 (lower is better) Translates to: SSESLKIVFACVSFFLEFGVPAE*VEVASS Trigger: CGATGACGCAACCTCAACGCACTCCGCAGGCACCCC...GAACTCAAGGAAGAAGGAAACACACGCAAAAACTATTTTAAGACTCTCTGAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | GTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCAAACCAGTTGTTCACTTaGAGAATTGTCAGTCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: VMRFRQVSISLRSMVLFSNQLFT*RIVSPV Trigger: CACGGGACTGACAATTCTGCAAGTGAACAACTGGTT...TGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | TCGATGAGCCCGTCGCTTCACATTTGTGTTCTTGTCCCATTGGTCCTCTGTTGCCAGCTAATGTACCGGTaGCAGAAGTTATCACATAGT | + |
|
Preference number: 4 (lower is better) Translates to: SMSPSLHICVLVPLVLCCQLMYR*QKLSHS Trigger: ACTATGTGATAACTTCTGCCACCGGTACATTAGCTG...GCAACAGAGGACCAATGGGACAAGAACACAAATGTGAAGCGACGGGCTCATCGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | TCGATGAGCCCGTCGCTTCACATTTGTGTTCTTGTCCCATTGGTCCTCTGTTGCCTTCATGATCTGACTTaGAGCTTCCATCTCTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SMSPSLHICVLVPLVLCCLHDLT*SFHLSH Trigger: ATGAGAGAGATGGAAGCTCCAAGTCAGATCATGAAG...GCAACAGAGGACCAATGGGACAAGAACACAAATGTGAAGCGACGGGCTCATCGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | AAGATTGTTTTGTCCACAGCCAAGGCTCAGAACTTGAAGAAGCCTTCGCTCTGTGGTCGGCGAGATTTGTaGAGGAGCCTGAAAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KIVLSTAKAQNLKKPSLCGRRDL*RSLKVL Trigger: AAGAACTTTCAGGCTCCTCCACAAATCTCGCCGACC...ACAGAGCGAAGGCTTCTTCAAGTTCTGAGCCTTGGCTGTGGACAAAACAATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | CCGCCAACATTGGGATCTACAGAATTTAACATTGTGGGGCTCTGTGCTGACATAGGTCGGCGAGATTTGTaGAGGAGCCTGAAAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PPTLGSTEFNIVGLCADIGRRDL*RSLKVL Trigger: AAGAACTTTCAGGCTCCTCCACAAATCTCGCCGACC...TATGTCAGCACAGAGCCCCACAATGTTAAATTCTGTAGATCCCAATGTTGGCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | AAACAATTAAAAGACCGAACTCTGTACGAAGTTTGTTACAGTATTCTCTTGCTCAAGCATGGCCCCCACTaGAGGGTCCTGGGGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KQLKDRTLYEVCYSILLLKHGPH*RVLGCL Trigger: CAGGCACCCCAGGACCCTCCAGTGGGGGCCATGCTT...GAGCAAGAGAATACTGTAACAAACTTCGTACAGAGTTCGGTCTTTTAATTGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | GAAAAGAGGACCCCATGGACATACAATACCAATTCCACAGCAGATCTGATACTAGGGTGTGTGAGATGCTaGAAGAGCCACGCTCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: EKRTPWTYNTNSTADLILGCVRC*KSHALM Trigger: CATGAGAGCGTGGCTCTTCCAGCATCTCACACACCC...TAGTATCAGATCTGCTGTGGAATTGGTATTGTATGTCCATGGGGTCCTCTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | TCCGCAGCATGGTTCTTTTCTCATTGGCCCAACAGGTTTAAAATATACCACAGTGGGTGTGTGAGATGCTaGAAGAGCCACGCTCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: SAAWFFSHWPNRFKIYHSGCVRC*KSHALM Trigger: CATGAGAGCGTGGCTCTTCCAGCATCTCACACACCC...ACTGTGGTATATTTTAAACCTGTTGGGCCAATGAGAAAAGAACCATGCTGCGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | ATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCATTGCTATACGCTGCTCCTTaGCTCACTGAAGGATCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: MRFRQVSISLRSMVLFSLLYAAP*LTEGSR Trigger: TCTTGATCCTTCAGTGAGCCAAGGAGCAGCGTATAG...CAATGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028639.13 ENSMUST00000110906.9 ENSMUST00000110907.8 |
||
| CDS-3UTR CCA 90 bp | AATTGTCTCGATGAGCCCGTCGCTTCACATTTGTGTTCTTGTCCCATTGGTCCTCTATACGCTGCTCCTTaGCTCACTGAAGGATCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NCLDEPVASHLCSCPIGPLYAAP*LTEGSR Trigger: TCTTGATCCTTCAGTGAGCCAAGGAGCAGCGTATAG...AGGACCAATGGGACAAGAACACAAATGTGAAGCGACGGGCTCATCGAGACAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028639.13 ENSMUST00000110906.9 ENSMUST00000110907.8 |
||
| CDS-3UTR TCA 90 bp | GTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCAAAGTTCTTCATGATCTaGCTTGGAGCTTCCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VMRFRQVSISLRSMVLFSKFFMI*LGASIS Trigger: AGAGATGGAAGCTCCAAGTCAGATCATGAAGAACTT...TGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR TCA 90 bp | AAACAATTAAAAGACCGAACTCTGTACGAAGTTTGTTACAGTATTCTCTTGCTCGTGGTCTCGCCAGGATaGAGGGTTGTGGTCGGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: KQLKDRTLYEVCYSILLLVVSPG*RVVVGE Trigger: CTCGCCGACCACAACCCTTCATCCTGGCGAGACCAC...GAGCAAGAGAATACTGTAACAAACTTCGTACAGAGTTCGGTCTTTTAATTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | CACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAAGACAGTCATTCTTTTTTTTCGGCGCGAACCTaGTTGGCGAAGACCGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: HSLFWIVNSLMNQDSHSFFSART*LAKTAM Trigger: CATCGCGGTCTTCGCCAAGCAGGTTCGCGCCGAAAA...AAAAGAATGACTGTCTTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTG 47% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS-3UTR GCA 90 bp | AAAATATACCACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAAGACAGTTCCCCTGGCATGCTCTaGAAACCTGCAGGCCGGATC | + |
|
Preference number: 4 (lower is better) Translates to: KIYHSLFWIVNSLMNQDSSPGML*KPAGRI Trigger: GATCCGGCCTGCAGGTTTGCAGAGCATGCCAGGGGA...ACTGTCTTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTGGTATATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 |
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| CDS-3UTR GCA 90 bp | AGGTTTAAAATATACCACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAAGTAGGGGGTCCTCCGTaGATCACCATGGCTGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RFKIYHSLFWIVNSLMNQVGGPP*ITMAGW Trigger: CCACCCAGCCATGGTGATGCACGGAGGACCCCCTAC...TTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTGGTATATTTTAAACCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 |
||
| CDS-3UTR GCA 90 bp | CTTAGTCCCTATGTTTATGCTACAGTAGTTATAACTCTCGGAGTCTTTCTCCAGCTCTGGACTATACGCTaGTCCTTGGCTCACTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LSPYVYATVVITLGVFLQLWTIR*SLAHCS Trigger: CGAGCAGTGAGCCAAGGAGCAGCGTATAGTCCAGAG...CTGGAGAAAGACTCCGAGAGTTATAACTACTGTAGCATAAACATAGGGACTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110908.9 |
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| CDS-3UTR CCA 90 bp | AGCCCGTCGCTTCACATTTGTGTTCTTGTCCCATTGGTCCTCTGTTGCTTGATGCAGCTAATGTACCGGTaGCAGAAGTTATCACATAGT | + |
|
Preference number: 4 (lower is better) Translates to: SPSLHICVLVPLVLCCLMQLMYR*QKLSHS Trigger: ACTATGTGATAACTTCTGCCACCGGTACATTAGCTG...CATCAAGCAACAGAGGACCAATGGGACAAGAACACAAATGTGAAGCGACGGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | CTTAGTCCCTATGTTTATGCTACAGTAGTTATAACTCTCGGAGTCTTTCTCCAGGGGTGTGTGAGATGCTaGAAGAGCCACGCTCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: LSPYVYATVVITLGVFLQGCVRC*KSHALM Trigger: CATGAGAGCGTGGCTCTTCCAGCATCTCACACACCC...CTGGAGAAAGACTCCGAGAGTTATAACTACTGTAGCATAAACATAGGGACTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS-3UTR CCA 90 bp | GACCCCATGGACATACAATACCAATTCCACAGCAGATCTGATACTAGCAAAAACACACAAAGCTCCCCATaGGCTGACCCTCTGGACTAT | + |
|
Preference number: 4 (lower is better) Translates to: DPMDIQYQFHSRSDTSKNTQSSP*ADPLDY Trigger: ATAGTCCAGAGGGTCAGCCCATGGGGAGCTTTGTGT...GTTTTTGCTAGTATCAGATCTGCTGTGGAATTGGTATTGTATGTCCATGGGGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | GACCCCATGGACATACAATACCAATTCCACAGCAGATCTGATACTAGCAAAAACAGAAACGTAGTCCCCTaGCATGCTCTGCAAACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DPMDIQYQFHSRSDTSKNRNVVP*HALQTC Trigger: GCAGGTTTGCAGAGCATGCCAGGGGACTACGTTTCT...GTTTTTGCTAGTATCAGATCTGCTGTGGAATTGGTATTGTATGTCCATGGGGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 |
||
| CDS-3UTR CCA 90 bp | AAGATTGTTTTGTCCACAGCCAAGGCTCAGAACTTGAAGAAGCCTTCGCTCTGTCATACCCATTCCCATTaGACCACCCTGAGAAACGTA | + |
|
Preference number: 4 (lower is better) Translates to: KIVLSTAKAQNLKKPSLCHTHSH*TTLRNV Trigger: TACGTTTCTCAGGGTGGTCCAATGGGAATGGGTATG...ACAGAGCGAAGGCTTCTTCAAGTTCTGAGCCTTGGCTGTGGACAAAACAATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 |
||
| CDS-3UTR CCA 90 bp | GGTCAAAGTTCAGAGAGTCTTAAAATAGTTTTTGCGTGTGTTTCCTTCTTCCTTTGCCCATTCCACTCATaGGTCCTGCAGGCCGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: GQSSESLKIVFACVSFFLCPFHS*VLQAGS Trigger: GGATCCGGCCTGCAGGACCCATGAGTGGAATGGGCA...AAGGAAGAAGGAAACACACGCAAAAACTATTTTAAGACTCTCTGAACTTTGACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR CAA 72 bp | GGACAAAATTGTCTCGATGAGCCCGTCGCTTCACATTaGTGTTCTTGTCCCATTGGTCCTCTGTTGCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GQNCLDEPVASH*CSCPIGPLLLD Trigger: ATCAAGCAACAGAGGACCAATGGGACAAGAACACAAATGTGAAGCGACGGGCTCATCGAGACAATTTTGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| 3UTR CAA 72 bp | TGTGCGTTGAGGAAAGCTGCCCAACTTAAGATTGTTTaGTCCACAGCCAAGGCTCAGAACTTGAAGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CALRKAAQLKIV*STAKAQNLKKP Trigger: AGGCTTCTTCAAGTTCTGAGCCTTGGCTGTGGACAAAACAATCTTAAGTTGGGCAGCTTTCCTCAACGCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS-3UTR TCA 90 bp | TGTTTATGCTACAGTAGTTATAACTCTCGGAGTCTTTCTCCAGAGGATCTTTGCTTTTCAAGGCGTCGTTaGCAGCAGATCCCATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CLCYSSYNSRSLSPEDLCFSRRR*QQIPCW Trigger: CCAGCATGGGATCTGCTGTCAACGACGCCTTGAAAA...GCAAAGATCCTCTGGAGAAAGACTCCGAGAGTTATAACTACTGTAGCATAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR TCA 90 bp | GTTATAACTCTCGGAGTCTTTCTCCAGAGGATCTTTGCATGGACAAAATTGTCTTTTTCAAGGCGTCGTTaGCAGCAGATCCCATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VITLGVFLQRIFAWTKLSFSRRR*QQIPCW Trigger: CCAGCATGGGATCTGCTGTCAACGACGCCTTGAAAA...AGACAATTTTGTCCATGCAAAGATCCTCTGGAGAAAGACTCCGAGAGTTATAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR TCA 90 bp | CTTCACATTTGTGTTCTTGTCCCATTGGTCCTCTGTTGCTTGATGAAAAATGACTTTTCAAGGCGTCGTTaGCAGCAGATCCCATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LHICVLVPLVLCCLMKNDFSRRR*QQIPCW Trigger: CCAGCATGGGATCTGCTGTCAACGACGCCTTGAAAA...GTCATTTTTCATCAAGCAACAGAGGACCAATGGGACAAGAACACAAATGTGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR TCA 90 bp | AAAATATACCACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAAGACAGTAAGCTCCCCATGGGCTaGCCCTCTGGACTATACGCT | + |
|
Preference number: 4 (lower is better) Translates to: KIYHSLFWIVNSLMNQDSKLPMG*PSGLYA Trigger: AGCGTATAGTCCAGAGGGTCAGCCCATGGGGAGCTT...ACTGTCTTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTGGTATATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR TCA 90 bp | AATAATCACAGCTGTCTGGAGTTTCATATTAAGTGTCACATCTGGTCAAAGTTCAAGCTCCCCATGGGCTaGCCCTCTGGACTATACGCT | + |
|
Preference number: 4 (lower is better) Translates to: NNHSCLEFHIKCHIWSKFKLPMG*PSGLYA Trigger: AGCGTATAGTCCAGAGGGTCAGCCCATGGGGAGCTT...GAACTTTGACCAGATGTGACACTTAATATGAAACTCCAGACAGCTGTGATTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | AAAATATACCACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAAGACAGTTTTTCGGCGCGAACCTaGTTGGCGAAGACCGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: KIYHSLFWIVNSLMNQDSFSART*LAKTAM Trigger: CATCGCGGTCTTCGCCAAGCAGGTTCGCGCCGAAAA...ACTGTCTTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTGGTATATTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | TCTCATTGGCCCAACAGGTTTAAAATATACCACAGTCTCTTCTGGATAGTGAATTACGGGTGTGTGAGATaGTGGAAGAGCCACGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SHWPNRFKIYHSLFWIVNYGCVR*WKSHAL Trigger: GAGAGCGTGGCTCTTCCAGCATCTCACACACCCGTA...ATTCACTATCCAGAAGAGACTGTGGTATATTTTAAACCTGTTGGGCCAATGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | TATAACTCTCGGAGTCTTTCTCCAGAGGATCTTTGCATGGACAAAATTGTCTCGCCATGCCCATATTCATaGCCATTCCACTCATGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: YNSRSLSPEDLCMDKIVSPCPYS*PFHSWV Trigger: GACCCATGAGTGGAATGGGCATGAATATGGGCATGG...CGAGACAATTTTGTCCATGCAAAGATCCTCTGGAGAAAGACTCCGAGAGTTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | TCCGCAGCATGGTTCTTTTCTCATTGGCCCAACAGGTTTAAAATATACCACAGTCCATGCCCATATTCATaGCCATTCCACTCATGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SAAWFFSHWPNRFKIYHSPCPYS*PFHSWV Trigger: GACCCATGAGTGGAATGGGCATGAATATGGGCATGG...ACTGTGGTATATTTTAAACCTGTTGGGCCAATGAGAAAAGAACCATGCTGCGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | AAAATATACCACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAAGACAGTGAGGGTCTCCGTACATaGAAGCGGGAACCCCTACTC | + |
|
Preference number: 4 (lower is better) Translates to: KIYHSLFWIVNSLMNQDSEGLRT*KREPLL Trigger: GAGTAGGGGTTCCCGCTTCCATGTACGGAGACCCTC...ACTGTCTTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTGGTATATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | AGTTCAGAGAGTCTTAAAATAGTTTTTGCGTGTGTTTCCTTCTTCCTTGAGTTCGAGGGTCTCCGTACATaGAAGCGGGAACCCCTACTC | + |
|
Preference number: 4 (lower is better) Translates to: SSESLKIVFACVSFFLEFEGLRT*KREPLL Trigger: GAGTAGGGGTTCCCGCTTCCATGTACGGAGACCCTC...GAACTCAAGGAAGAAGGAAACACACGCAAAAACTATTTTAAGACTCTCTGAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | ATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCATTGCAATCACGAGGTCAATaGGCATTTTTCCCTTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: MRFRQVSISLRSMVLFSLQSRGQ*AFFPSN Trigger: GTTTGAAGGGAAAAATGCCCATTGACCTCGTGATTG...CAATGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | CCAGAGGATCTTTGCATGGACAAAATTGTCTCGATGAGCCCGTCGCTTCACATTCTTCATGATCTGACTTaGAGCTTCCATCTCTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PEDLCMDKIVSMSPSLHILHDLT*SFHLSH Trigger: ATGAGAGAGATGGAAGCTCCAAGTCAGATCATGAAG...AATGTGAAGCGACGGGCTCATCGAGACAATTTTGTCCATGCAAAGATCCTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | GAAAAGAGGACCCCATGGACATACAATACCAATTCCACAGCAGATCTGATACTAGGTCGGCGAGATTTGTaGAGGAGCCTGAAAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EKRTPWTYNTNSTADLILGRRDL*RSLKVL Trigger: AAGAACTTTCAGGCTCCTCCACAAATCTCGCCGACC...TAGTATCAGATCTGCTGTGGAATTGGTATTGTATGTCCATGGGGTCCTCTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | TGTTTATGCTACAGTAGTTATAACTCTCGGAGTCTTTCTCCAGAGGATCTTTGCACACAAAGCTCCCCATaGGCTGACCCTCTGGACTAT | + |
|
Preference number: 4 (lower is better) Translates to: CLCYSSYNSRSLSPEDLCTQSSP*ADPLDY Trigger: ATAGTCCAGAGGGTCAGCCCATGGGGAGCTTTGTGT...GCAAAGATCCTCTGGAGAAAGACTCCGAGAGTTATAACTACTGTAGCATAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | TACCACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAAGACAGTCATTCTACCATGGCTGGGTGGTaGGGATGGCTTGGCAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: YHSLFWIVNSLMNQDSHSTMAGW*GWLGKY Trigger: ATATTTGCCAAGCCATCCCCACCACCCAGCCATGGT...AGAATGACTGTCTTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 |
||
| CDS-3UTR CCA 90 bp | AAACAATTAAAAGACCGAACTCTGTACGAAGTTTGTTACAGTATTCTCTTGCTCGTGCATCACCATGGCTaGGTGGTGGGGATGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KQLKDRTLYEVCYSILLLVHHHG*VVGMAW Trigger: CCAAGCCATCCCCACCACCCAGCCATGGTGATGCAC...GAGCAAGAGAATACTGTAACAAACTTCGTACAGAGTTCGGTCTTTTAATTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 |
||
| CDS-3UTR CCA 90 bp | CCAGAGGATCTTTGCATGGACAAAATTGTCTCGATGAGCCCGTCGCTTCACATTCCTGTCCGCCAACATTaGGATCTACAGAATTTAACA | + |
|
Preference number: 4 (lower is better) Translates to: PEDLCMDKIVSMSPSLHIPVRQH*DLQNLT Trigger: TGTTAAATTCTGTAGATCCCAATGTTGGCGGACAGG...AATGTGAAGCGACGGGCTCATCGAGACAATTTTGTCCATGCAAAGATCCTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 |
||
| CDS-3UTR CCA 90 bp | GACCCCATGGACATACAATACCAATTCCACAGCAGATCTGATACTAGCAAAAACCTATACGCTGCTCCTTaGCTCACTGCTCGATTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: DPMDIQYQFHSRSDTSKNLYAAP*LTARFD Trigger: GTCAAATCGAGCAGTGAGCCAAGGAGCAGCGTATAG...GTTTTTGCTAGTATCAGATCTGCTGTGGAATTGGTATTGTATGTCCATGGGGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102538.11 ENSMUST00000110908.9 |
||
| CDS-3UTR TCA 90 bp | ATGGACAAAATTGTCTCGATGAGCCCGTCGCTTCACATTTGTGTTCTTGTCCCAAAGTTCTTCATGATCTaGCTTGGAGCTTCCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: MDKIVSMSPSLHICVLVPKFFMI*LGASIS Trigger: AGAGATGGAAGCTCCAAGTCAGATCATGAAGAACTT...TGGGACAAGAACACAAATGTGAAGCGACGGGCTCATCGAGACAATTTTGTCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR TCA 90 bp | TATGCTACAGTAGTTATAACTCTCGGAGTCTTTCTCCAGAGGATCTTTGCATGGTGCTCCTTGGCTCACTaGAGGATCAAGAAGAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: YATVVITLGVFLQRIFAWCSLAH*RIKKKT Trigger: GGTTTTCTTCTTGATCCTTCAGTGAGCCAAGGAGCA...CCATGCAAAGATCCTCTGGAGAAAGACTCCGAGAGTTATAACTACTGTAGCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028639.13 ENSMUST00000110906.9 ENSMUST00000110907.8 |
||
| CDS-3UTR TCA 90 bp | TCTCATTGGCCCAACAGGTTTAAAATATACCACAGTCTCTTCTGGATAGTGAATGCTCACTGCTCGATTTaGCTGGTCAATCATGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SHWPNRFKIYHSLFWIVNAHCSI*LVNHGL Trigger: CAGCCCATGATTGACCAGTCAAATCGAGCAGTGAGC...ATTCACTATCCAGAAGAGACTGTGGTATATTTTAAACCTGTTGGGCCAATGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | CTTCACATTTGTGTTCTTGTCCCATTGGTCCTCTGTTGCTTGATGAAAAATGACTCTAACCCATCGCCTTaGTCACTGCTGTTGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LHICVLVPLVLCCLMKNDSNPSP*SLLLSP Trigger: TGGAGACAACAGCAGTGAGCAAGGCGATGGGTTAGA...GTCATTTTTCATCAAGCAACAGAGGACCAATGGGACAAGAACACAAATGTGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | GCATGGTTCTTTTCTCATTGGCCCAACAGGTTTAAAATATACCACAGTCTCTTCTCTAACCCATCGCCTTaGTCACTGCTGTTGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AWFFSHWPNRFKIYHSLFSNPSP*SLLLSP Trigger: TGGAGACAACAGCAGTGAGCAAGGCGATGGGTTAGA...GAAGAGACTGTGGTATATTTTAAACCTGTTGGGCCAATGAGAAAAGAACCATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | GTTATAACTCTCGGAGTCTTTCTCCAGAGGATCTTTGCATGGACAAAATTGTCTTCTAACCCATCGCCTTaGTCACTGCTGTTGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VITLGVFLQRIFAWTKLSSNPSP*SLLLSP Trigger: TGGAGACAACAGCAGTGAGCAAGGCGATGGGTTAGA...AGACAATTTTGTCCATGCAAAGATCCTCTGGAGAAAGACTCCGAGAGTTATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | AAAGACCGAACTCTGTACGAAGTTTGTTACAGTATTCTCTTGCTCCTTTTTATCCGTCGTCATCACCTGTaGCAGGTGAAGCTACGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KDRTLYEVCYSILLLLFIRRHHL*QVKLRC Trigger: ACAGCGTAGCTTCACCTGGCACAGGTGATGACGACG...GATAAAAAGGAGCAAGAGAATACTGTAACAAACTTCGTACAGAGTTCGGTCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | AAAGACCGAACTCTGTACGAAGTTTGTTACAGTATTCTCTTGCTCCTTTTTATCTACGGGTGTGTGAGATaGTGGAAGAGCCACGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KDRTLYEVCYSILLLLFIYGCVR*WKSHAL Trigger: GAGAGCGTGGCTCTTCCAGCATCTCACACACCCGTA...GATAAAAAGGAGCAAGAGAATACTGTAACAAACTTCGTACAGAGTTCGGTCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | AGGTTTAAAATATACCACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAAGAGGGTCTCCGTACATaGAAGCGGGAACCCCTACTC | + |
|
Preference number: 4 (lower is better) Translates to: RFKIYHSLFWIVNSLMNQEGLRT*KREPLL Trigger: GAGTAGGGGTTCCCGCTTCCATGTACGGAGACCCTC...TTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTGGTATATTTTAAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | ATGGACAAAATTGTCTCGATGAGCCCGTCGCTTCACATTTGTGTTCTTGTCCCACAGCTAATGTACCGGTaGCAGAAGTTATCACATAGT | + |
|
Preference number: 4 (lower is better) Translates to: MDKIVSMSPSLHICVLVPQLMYR*QKLSHS Trigger: ACTATGTGATAACTTCTGCCACCGGTACATTAGCTG...TGGGACAAGAACACAAATGTGAAGCGACGGGCTCATCGAGACAATTTTGTCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | ATGGACAAAATTGTCTCGATGAGCCCGTCGCTTCACATTTGTGTTCTTGTCCCACAATCACGAGGTCAATaGGCATTTTTCCCTTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: MDKIVSMSPSLHICVLVPQSRGQ*AFFPSN Trigger: GTTTGAAGGGAAAAATGCCCATTGACCTCGTGATTG...TGGGACAAGAACACAAATGTGAAGCGACGGGCTCATCGAGACAATTTTGTCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | GTATGTGCGTTGAGGAAAGCTGCCCAACTTAAGATTGTTTTGTCCACAGCCAAGCAATCACGAGGTCAATaGGCATTTTTCCCTTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VCALRKAAQLKIVLSTAKQSRGQ*AFFPSN Trigger: GTTTGAAGGGAAAAATGCCCATTGACCTCGTGATTG...CTTGGCTGTGGACAAAACAATCTTAAGTTGGGCAGCTTTCCTCAACGCACATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | GGATCTTTGCATGGACAAAATTGTCTCGATGAGCCCGTCGCTTCACATTTGTGTCAATCACGAGGTCAATaGGCATTTTTCCCTTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GSLHGQNCLDEPVASHLCQSRGQ*AFFPSN Trigger: GTTTGAAGGGAAAAATGCCCATTGACCTCGTGATTG...ACACAAATGTGAAGCGACGGGCTCATCGAGACAATTTTGTCCATGCAAAGATCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | AAGATTGTTTTGTCCACAGCCAAGGCTCAGAACTTGAAGAAGCCTTCGCTCTGTCTTCATGATCTGACTTaGAGCTTCCATCTCTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KIVLSTAKAQNLKKPSLCLHDLT*SFHLSH Trigger: ATGAGAGAGATGGAAGCTCCAAGTCAGATCATGAAG...ACAGAGCGAAGGCTTCTTCAAGTTCTGAGCCTTGGCTGTGGACAAAACAATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | TGTGCGTTGAGGAAAGCTGCCCAACTTAAGATTGTTTTGTCCACAGCCAAGGCTTATTTGTCGCGACTTTaGGGAATATGCCTCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CALRKAAQLKIVLSTAKAYLSRL*GICLFS Trigger: AGAAAAGAGGCATATTCCCCAAAGTCGCGACAAATA...AGCCTTGGCTGTGGACAAAACAATCTTAAGTTGGGCAGCTTTCCTCAACGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | CCAGAGGATCTTTGCATGGACAAAATTGTCTCGATGAGCCCGTCGCTTCACATTTATTTGTCGCGACTTTaGGGAATATGCCTCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PEDLCMDKIVSMSPSLHIYLSRL*GICLFS Trigger: AGAAAAGAGGCATATTCCCCAAAGTCGCGACAAATA...AATGTGAAGCGACGGGCTCATCGAGACAATTTTGTCCATGCAAAGATCCTCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | GACCCCATGGACATACAATACCAATTCCACAGCAGATCTGATACTAGCAAAAACCTATACGCTGCTCCTTaGCTCACTGAAGGATCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: DPMDIQYQFHSRSDTSKNLYAAP*LTEGSR Trigger: TCTTGATCCTTCAGTGAGCCAAGGAGCAGCGTATAG...GTTTTTGCTAGTATCAGATCTGCTGTGGAATTGGTATTGTATGTCCATGGGGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028639.13 ENSMUST00000110906.9 ENSMUST00000110907.8 |
||
| CDS-3UTR CCA 90 bp | ATAATCACAGCTGTCTGGAGTTTCATATTAAGTGTCACATCTGGTCAAAGTTCACATGGGCTGACCCTCTaGACTATACGCTGCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IITAVWSFILSVTSGQSSHGLTL*TIRCSL Trigger: CAAGGAGCAGCGTATAGTCCAGAGGGTCAGCCCATG...TGAACTTTGACCAGATGTGACACTTAATATGAAACTCCAGACAGCTGTGATTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | AGGTTTAAAATATACCACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAAATAGTCATTCCAGGGTaGGTAGGGGGTCCTCCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RFKIYHSLFWIVNSLMNQIVIPG*VGGPPC Trigger: GCACGGAGGACCCCCTACCCACCCTGGAATGACTAT...TTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTGGTATATTTTAAACCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 |
||
| CDS-3UTR CCA 90 bp | AGACCGAACTCTGTACGAAGTTTGTTACAGTATTCTCTTGCTCCTTTTTATCCCCTATACGCTGCTCCTTaGCTCACTGCTCGATTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RPNSVRSLLQYSLAPFYPLYAAP*LTARFD Trigger: GTCAAATCGAGCAGTGAGCCAAGGAGCAGCGTATAG...GGGATAAAAAGGAGCAAGAGAATACTGTAACAAACTTCGTACAGAGTTCGGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110908.9 |
||
| CDS-3UTR TCA 90 bp | GGTCAAAGTTCAGAGAGTCTTAAAATAGTTTTTGCGTGTGTTTCCTTCTTCCTTGCTCACTGCTCGATTTaGCTGGTCAATCATGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GQSSESLKIVFACVSFFLAHCSI*LVNHGL Trigger: CAGCCCATGATTGACCAGTCAAATCGAGCAGTGAGC...AAGGAAGAAGGAAACACACGCAAAAACTATTTTAAGACTCTCTGAACTTTGACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | AAACAATTAAAAGACCGAACTCTGTACGAAGTTTGTTACAGTATTCTCTTGCTCCGTCGTCATCACCTGTaGCAGGTGAAGCTACGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KQLKDRTLYEVCYSILLLRRHHL*QVKLRC Trigger: ACAGCGTAGCTTCACCTGGCACAGGTGATGACGACG...GAGCAAGAGAATACTGTAACAAACTTCGTACAGAGTTCGGTCTTTTAATTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | AAACAATTAAAAGACCGAACTCTGTACGAAGTTTGTTACAGTATTCTCTTGCTCCTCTGGACTATACGCTaGTCCTTGGCTCACTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KQLKDRTLYEVCYSILLLLWTIR*SLAHCS Trigger: CGAGCAGTGAGCCAAGGAGCAGCGTATAGTCCAGAG...GAGCAAGAGAATACTGTAACAAACTTCGTACAGAGTTCGGTCTTTTAATTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | TTGAGGAAAGCTGCCCAACTTAAGATTGTTTTGTCCACAGCCAAGGCTCAGAACTATTTGTCGCGACTTTaGGGAATATGCCTCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRKAAQLKIVLSTAKAQNYLSRL*GICLFS Trigger: AGAAAAGAGGCATATTCCCCAAAGTCGCGACAAATA...GTTCTGAGCCTTGGCTGTGGACAAAACAATCTTAAGTTGGGCAGCTTTCCTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | ATGGACAAAATTGTCTCGATGAGCCCGTCGCTTCACATTTGTGTTCTTGTCCCATATTTGTCGCGACTTTaGGGAATATGCCTCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: MDKIVSMSPSLHICVLVPYLSRL*GICLFS Trigger: AGAAAAGAGGCATATTCCCCAAAGTCGCGACAAATA...TGGGACAAGAACACAAATGTGAAGCGACGGGCTCATCGAGACAATTTTGTCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | ATAATCACAGCTGTCTGGAGTTTCATATTAAGTGTCACATCTGGTCAAAGTTCAACACAAAGCTCCCCATaGGCTGACCCTCTGGACTAT | + |
|
Preference number: 4 (lower is better) Translates to: IITAVWSFILSVTSGQSSTQSSP*ADPLDY Trigger: ATAGTCCAGAGGGTCAGCCCATGGGGAGCTTTGTGT...TGAACTTTGACCAGATGTGACACTTAATATGAAACTCCAGACAGCTGTGATTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | GGTCAAAGTTCAGAGAGTCTTAAAATAGTTTTTGCGTGTGTTTCCTTCTTCCTTAGAAACGTAGTCCCCTaGCATGCTCTGCAAACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GQSSESLKIVFACVSFFLRNVVP*HALQTC Trigger: GCAGGTTTGCAGAGCATGCCAGGGGACTACGTTTCT...AAGGAAGAAGGAAACACACGCAAAAACTATTTTAAGACTCTCTGAACTTTGACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 |
||
| CDS-3UTR GCA 90 bp | AGACCGAACTCTGTACGAAGTTTGTTACAGTATTCTCTTGCTCCTTTTTATCCCAACCAGTTGTTCACTTaGAGAATTGTCAGTCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: RPNSVRSLLQYSLAPFYPNQLFT*RIVSPV Trigger: CACGGGACTGACAATTCTGCAAGTGAACAACTGGTT...GGGATAAAAAGGAGCAAGAGAATACTGTAACAAACTTCGTACAGAGTTCGGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR GCA 90 bp | GCATGGTTCTTTTCTCATTGGCCCAACAGGTTTAAAATATACCACAGTCTCTTCAACCAGTTGTTCACTTaGAGAATTGTCAGTCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: AWFFSHWPNRFKIYHSLFNQLFT*RIVSPV Trigger: CACGGGACTGACAATTCTGCAAGTGAACAACTGGTT...GAAGAGACTGTGGTATATTTTAAACCTGTTGGGCCAATGAGAAAAGAACCATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | TATGCTACAGTAGTTATAACTCTCGGAGTCTTTCTCCAGAGGATCTTTGCATGGCAGCTAATGTACCGGTaGCAGAAGTTATCACATAGT | + |
|
Preference number: 4 (lower is better) Translates to: YATVVITLGVFLQRIFAWQLMYR*QKLSHS Trigger: ACTATGTGATAACTTCTGCCACCGGTACATTAGCTG...CCATGCAAAGATCCTCTGGAGAAAGACTCCGAGAGTTATAACTACTGTAGCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | GACCCCATGGACATACAATACCAATTCCACAGCAGATCTGATACTAGCAAAAACCAATCACGAGGTCAATaGGCATTTTTCCCTTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: DPMDIQYQFHSRSDTSKNQSRGQ*AFFPSN Trigger: GTTTGAAGGGAAAAATGCCCATTGACCTCGTGATTG...GTTTTTGCTAGTATCAGATCTGCTGTGGAATTGGTATTGTATGTCCATGGGGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | TATAACTCTCGGAGTCTTTCTCCAGAGGATCTTTGCATGGACAAAATTGTCTCGCTTCATGATCTGACTTaGAGCTTCCATCTCTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: YNSRSLSPEDLCMDKIVSLHDLT*SFHLSH Trigger: ATGAGAGAGATGGAAGCTCCAAGTCAGATCATGAAG...CGAGACAATTTTGTCCATGCAAAGATCCTCTGGAGAAAGACTCCGAGAGTTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS-3UTR CCA 90 bp | GGTCAAAGTTCAGAGAGTCTTAAAATAGTTTTTGCGTGTGTTTCCTTCTTCCTTGGTCGGCGAGATTTGTaGAGGAGCCTGAAAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GQSSESLKIVFACVSFFLGRRDL*RSLKVL Trigger: AAGAACTTTCAGGCTCCTCCACAAATCTCGCCGACC...AAGGAAGAAGGAAACACACGCAAAAACTATTTTAAGACTCTCTGAACTTTGACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | AGGTTTAAAATATACCACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAAACACAAAGCTCCCCATaGGCTGACCCTCTGGACTAT | + |
|
Preference number: 4 (lower is better) Translates to: RFKIYHSLFWIVNSLMNQTQSSP*ADPLDY Trigger: ATAGTCCAGAGGGTCAGCCCATGGGGAGCTTTGTGT...TTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTGGTATATTTTAAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | AGGTTTAAAATATACCACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAAACCATGGCTGGGTGGTaGGGATGGCTTGGCAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: RFKIYHSLFWIVNSLMNQTMAGW*GWLGKY Trigger: ATATTTGCCAAGCCATCCCCACCACCCAGCCATGGT...TTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTGGTATATTTTAAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 |
||
| CDS-3UTR TCA 90 bp | TACCACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAAGACAGTCATTCTAAGTTCTTCATGATCTaGCTTGGAGCTTCCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YHSLFWIVNSLMNQDSHSKFFMI*LGASIS Trigger: AGAGATGGAAGCTCCAAGTCAGATCATGAAGAACTT...AGAATGACTGTCTTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTGGTA 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS-3UTR GCA 90 bp | AAACAATTAAAAGACCGAACTCTGTACGAAGTTTGTTACAGTATTCTCTTGCTCTCTAACCCATCGCCTTaGTCACTGCTGTTGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KQLKDRTLYEVCYSILLLSNPSP*SLLLSP Trigger: TGGAGACAACAGCAGTGAGCAAGGCGATGGGTTAGA...GAGCAAGAGAATACTGTAACAAACTTCGTACAGAGTTCGGTCTTTTAATTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS-3UTR CCA 90 bp | AAACAATTAAAAGACCGAACTCTGTACGAAGTTTGTTACAGTATTCTCTTGCTCGGTCGGCGAGATTTGTaGAGGAGCCTGAAAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KQLKDRTLYEVCYSILLLGRRDL*RSLKVL Trigger: AAGAACTTTCAGGCTCCTCCACAAATCTCGCCGACC...GAGCAAGAGAATACTGTAACAAACTTCGTACAGAGTTCGGTCTTTTAATTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS-3UTR GCA 90 bp | AAAATATACCACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAAGACAGTAACCAGTTGTTCACTTaGAGAATTGTCAGTCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: KIYHSLFWIVNSLMNQDSNQLFT*RIVSPV Trigger: CACGGGACTGACAATTCTGCAAGTGAACAACTGGTT...ACTGTCTTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTGGTATATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS-3UTR GCA 90 bp | ATAATCACAGCTGTCTGGAGTTTCATATTAAGTGTCACATCTGGTCAAAGTTCAAACCAGTTGTTCACTTaGAGAATTGTCAGTCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: IITAVWSFILSVTSGQSSNQLFT*RIVSPV Trigger: CACGGGACTGACAATTCTGCAAGTGAACAACTGGTT...TGAACTTTGACCAGATGTGACACTTAATATGAAACTCCAGACAGCTGTGATTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CCA 90 bp | CACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAAGACAGTCATTCTTTTCCTGTCCGCCAACATTaGGATCTACAGAATTTAACA | + |
|
Preference number: 4 (lower is better) Translates to: HSLFWIVNSLMNQDSHSFPVRQH*DLQNLT Trigger: TGTTAAATTCTGTAGATCCCAATGTTGGCGGACAGG...AAAAGAATGACTGTCTTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 |
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| CDS-3UTR TCA 90 bp | GGTCAAAGTTCAGAGAGTCTTAAAATAGTTTTTGCGTGTGTTTCCTTCTTCCTTAAGTTCTTCATGATCTaGCTTGGAGCTTCCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GQSSESLKIVFACVSFFLKFFMI*LGASIS Trigger: AGAGATGGAAGCTCCAAGTCAGATCATGAAGAACTT...AAGGAAGAAGGAAACACACGCAAAAACTATTTTAAGACTCTCTGAACTTTGACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS-3UTR GCA 90 bp | AGGTTTAAAATATACCACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAAAACCAGTTGTTCACTTaGAGAATTGTCAGTCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: RFKIYHSLFWIVNSLMNQNQLFT*RIVSPV Trigger: CACGGGACTGACAATTCTGCAAGTGAACAACTGGTT...TTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTGGTATATTTTAAACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS-3UTR CCA 90 bp | ATAATCACAGCTGTCTGGAGTTTCATATTAAGTGTCACATCTGGTCAAAGTTCACAGCTAATGTACCGGTaGCAGAAGTTATCACATAGT | + |
|
Preference number: 4 (lower is better) Translates to: IITAVWSFILSVTSGQSSQLMYR*QKLSHS Trigger: ACTATGTGATAACTTCTGCCACCGGTACATTAGCTG...TGAACTTTGACCAGATGTGACACTTAATATGAAACTCCAGACAGCTGTGATTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS-3UTR CCA 90 bp | AGTTCAGAGAGTCTTAAAATAGTTTTTGCGTGTGTTTCCTTCTTCCTTGAGTTCCTTCATGATCTGACTTaGAGCTTCCATCTCTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSESLKIVFACVSFFLEFLHDLT*SFHLSH Trigger: ATGAGAGAGATGGAAGCTCCAAGTCAGATCATGAAG...GAACTCAAGGAAGAAGGAAACACACGCAAAAACTATTTTAAGACTCTCTGAACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS-3UTR CCA 90 bp | AAACAATTAAAAGACCGAACTCTGTACGAAGTTTGTTACAGTATTCTCTTGCTCCAGCTAATGTACCGGTaGCAGAAGTTATCACATAGT | + |
|
Preference number: 4 (lower is better) Translates to: KQLKDRTLYEVCYSILLLQLMYR*QKLSHS Trigger: ACTATGTGATAACTTCTGCCACCGGTACATTAGCTG...GAGCAAGAGAATACTGTAACAAACTTCGTACAGAGTTCGGTCTTTTAATTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS-3UTR CCA 90 bp | AAACAATTAAAAGACCGAACTCTGTACGAAGTTTGTTACAGTATTCTCTTGCTCCTTCATGATCTGACTTaGAGCTTCCATCTCTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KQLKDRTLYEVCYSILLLLHDLT*SFHLSH Trigger: ATGAGAGAGATGGAAGCTCCAAGTCAGATCATGAAG...GAGCAAGAGAATACTGTAACAAACTTCGTACAGAGTTCGGTCTTTTAATTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS-3UTR CCA 90 bp | GGTCAAAGTTCAGAGAGTCTTAAAATAGTTTTTGCGTGTGTTTCCTTCTTCCTTTATTTGTCGCGACTTTaGGGAATATGCCTCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GQSSESLKIVFACVSFFLYLSRL*GICLFS Trigger: AGAAAAGAGGCATATTCCCCAAAGTCGCGACAAATA...AAGGAAGAAGGAAACACACGCAAAAACTATTTTAAGACTCTCTGAACTTTGACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS-3UTR CCA 90 bp | AGGTTTAAAATATACCACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAATATTTGTCGCGACTTTaGGGAATATGCCTCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RFKIYHSLFWIVNSLMNQYLSRL*GICLFS Trigger: AGAAAAGAGGCATATTCCCCAAAGTCGCGACAAATA...TTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTGGTATATTTTAAACCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS GCA 90 bp | CAGAGGAACAGACGTCTCCGCCGGCCACTCCGGGTTCCCGGGGAGTaGAGGTCGCCAGCTCGCACTTCTCAAAAACCAGAGCTAACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QRNRRLRRPLRVPGE*RSPARTSQKPELTE Trigger: CTCTGTTAGCTCTGGTTTTTGAGAAGTGCGAGCTGGCGACCTGCACTCCCCGGGAACCCGGAGTGGCCGGCGGAGACGTCTGTTCCTCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS-3UTR CAA 90 bp | CCAGAGGATCTTTGCATGGACAAAATTGTCTCGATGAGCCCGTCGCTTCACATTCTGGCTGGCATGACATaGGGGTGCGGGGCGTGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: PEDLCMDKIVSMSPSLHILAGMT*GCGACA Trigger: CGCGCACGCCCCGCACCCCAATGTCATGCCAGCCAG...AATGTGAAGCGACGGGCTCATCGAGACAATTTTGTCCATGCAAAGATCCTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS-3UTR CAA 90 bp | ATGGACAAAATTGTCTCGATGAGCCCGTCGCTTCACATTTGTGTTCTTGTCCCACTGGCTGGCATGACATaGGGGTGCGGGGCGTGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: MDKIVSMSPSLHICVLVPLAGMT*GCGACA Trigger: CGCGCACGCCCCGCACCCCAATGTCATGCCAGCCAG...TGGGACAAGAACACAAATGTGAAGCGACGGGCTCATCGAGACAATTTTGTCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS-3UTR CAA 90 bp | AGCCCGTCGCTTCACATTTGTGTTCTTGTCCCATTGGTCCTCTGTTGCTTGATGTCGGCGCGAACCTGCTaGGCGAAGACCGCGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SPSLHICVLVPLVLCCLMSARTC*AKTAMS Trigger: GGACATCGCGGTCTTCGCCAAGCAGGTTCGCGCCGA...CATCAAGCAACAGAGGACCAATGGGACAAGAACACAAATGTGAAGCGACGGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS-3UTR CAA 90 bp | CCAGAGGATCTTTGCATGGACAAAATTGTCTCGATGAGCCCGTCGCTTCACATTTCGGCGCGAACCTGCTaGGCGAAGACCGCGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PEDLCMDKIVSMSPSLHISARTC*AKTAMS Trigger: GGACATCGCGGTCTTCGCCAAGCAGGTTCGCGCCGA...AATGTGAAGCGACGGGCTCATCGAGACAATTTTGTCCATGCAAAGATCCTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | TCCGCAGCATGGTTCTTTTCTCATTGGCCCAACAGGTTTAAAATATACCACAGTCTGGCTGGCATGACATaGGGGTGCGGGGCGTGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: SAAWFFSHWPNRFKIYHSLAGMT*GCGACA Trigger: CGCGCACGCCCCGCACCCCAATGTCATGCCAGCCAG...ACTGTGGTATATTTTAAACCTGTTGGGCCAATGAGAAAAGAACCATGCTGCGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS-3UTR CAA 90 bp | GACCCCATGGACATACAATACCAATTCCACAGCAGATCTGATACTAGCAAAAACCTGGCTGGCATGACATaGGGGTGCGGGGCGTGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: DPMDIQYQFHSRSDTSKNLAGMT*GCGACA Trigger: CGCGCACGCCCCGCACCCCAATGTCATGCCAGCCAG...GTTTTTGCTAGTATCAGATCTGCTGTGGAATTGGTATTGTATGTCCATGGGGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS-3UTR CAA 90 bp | AAGATTGTTTTGTCCACAGCCAAGGCTCAGAACTTGAAGAAGCCTTCGCTCTGTTCGGCGCGAACCTGCTaGGCGAAGACCGCGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KIVLSTAKAQNLKKPSLCSARTC*AKTAMS Trigger: GGACATCGCGGTCTTCGCCAAGCAGGTTCGCGCCGA...ACAGAGCGAAGGCTTCTTCAAGTTCTGAGCCTTGGCTGTGGACAAAACAATCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS-3UTR CAA 90 bp | GATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCATTCGGAGTGCGTTGAGGTaGCGTCATCGTGGTCTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: DEVQTSVHLAPQHGSFLIRSALR*RHRGLA Trigger: GGCGAGACCACGATGACGCAACCTCAACGCACTCCG...AATGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | ATTCTAGCCGCTGGAGTTAGTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGGGGGAGGAGTGTAACTaGGCTGGGCCATACCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: ILAAGVSDEVQTSVHLAPGEECN*AGPYPF Trigger: GAATGGGTATGGCCCAGCCAAGTTACACTCCTCCCC...CGGAGCGAGATGGACACTTGTCTGAACCTCATCACTAACTCCAGCGGCTAGAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 |
||
| CDS-3UTR CAA 90 bp | TACCACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAAGACAGTCATTCTCTGGCTGGCATGACATaGGGGTGCGGGGCGTGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: YHSLFWIVNSLMNQDSHSLAGMT*GCGACA Trigger: CGCGCACGCCCCGCACCCCAATGTCATGCCAGCCAG...AGAATGACTGTCTTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | GTATGTGCGTTGAGGAAAGCTGCCCAACTTAAGATTGTTTTGTCCACAGCCAAGCGGAGTGCGTTGAGGTaGCGTCATCGTGGTCTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: VCALRKAAQLKIVLSTAKRSALR*RHRGLA Trigger: GGCGAGACCACGATGACGCAACCTCAACGCACTCCG...CTTGGCTGTGGACAAAACAATCTTAAGTTGGGCAGCTTTCCTCAACGCACATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | GCCGCTGGAGTTAGTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATTGTTCACTTGCAGAATaGTCAGTCCCGTGTCTTGCG | + |
|
Preference number: 5 (lower is better) Translates to: AAGVSDEVQTSVHLAPQHCSLAE*SVPCLA Trigger: CGCAAGACACGGGACTGACAATTCTGCAAGTGAACA...ATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATCACTAACTCCAGCGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | CAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCATTGGCCCAACAGGTTCTTTTCAAGGCGTCGTaGACAGCAGATCCCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QVSISLRSMVLFSLAQQVLFKAS*TADPML Trigger: CAGCATGGGATCTGCTGTCAACGACGCCTTGAAAAG...AACCTGTTGGGCCAATGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | TCGATGAGCCCGTCGCTTCACATTTGTGTTCTTGTCCCATTGGTCCTCTGTTGCCTTTTCAAGGCGTCGTaGACAGCAGATCCCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SMSPSLHICVLVPLVLCCLFKAS*TADPML Trigger: CAGCATGGGATCTGCTGTCAACGACGCCTTGAAAAG...GCAACAGAGGACCAATGGGACAAGAACACAAATGTGAAGCGACGGGCTCATCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | ATTCTAGCCGCTGGAGTTAGTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGTGTGGTCGGCGAGATTaGTGGAGGAGCCTGAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: ILAAGVSDEVQTSVHLAPCGRRD*WRSLKV Trigger: AACTTTCAGGCTCCTCCACAAATCTCGCCGACCACA...CGGAGCGAGATGGACACTTGTCTGAACCTCATCACTAACTCCAGCGGCTAGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | GTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCAGGTGAAGCTACGCTGTaGTCTAACCCATCGCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: VMRFRQVSISLRSMVLFSGEATL*SNPSPC Trigger: GCAAGGCGATGGGTTAGACAACAGCGTAGCTTCACC...TGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | GCATGGTTCTTTTCTCATTGGCCCAACAGGTTTAAAATATACCACAGTCTCTTCTCGGCGCGAACCTGCTaGGCGAAGACCGCGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: AWFFSHWPNRFKIYHSLFSARTC*AKTAMS Trigger: GGACATCGCGGTCTTCGCCAAGCAGGTTCGCGCCGA...GAAGAGACTGTGGTATATTTTAAACCTGTTGGGCCAATGAGAAAAGAACCATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | GTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCATGTGGTCGGCGAGATTaGTGGAGGAGCCTGAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: VMRFRQVSISLRSMVLFSCGRRD*WRSLKV Trigger: AACTTTCAGGCTCCTCCACAAATCTCGCCGACCACA...TGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | TATGCTACAGTAGTTATAACTCTCGGAGTCTTTCTCCAGAGGATCTTTGCATGGCGGAGTGCGTTGAGGTaGCGTCATCGTGGTCTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: YATVVITLGVFLQRIFAWRSALR*RHRGLA Trigger: GGCGAGACCACGATGACGCAACCTCAACGCACTCCG...CCATGCAAAGATCCTCTGGAGAAAGACTCCGAGAGTTATAACTACTGTAGCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | TATAACTCTCGGAGTCTTTCTCCAGAGGATCTTTGCATGGACAAAATTGTCTCGCGGAGTGCGTTGAGGTaGCGTCATCGTGGTCTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: YNSRSLSPEDLCMDKIVSRSALR*RHRGLA Trigger: GGCGAGACCACGATGACGCAACCTCAACGCACTCCG...CGAGACAATTTTGTCCATGCAAAGATCCTCTGGAGAAAGACTCCGAGAGTTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | GATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCATTGGTGAAGCTACGCTGTaGTCTAACCCATCGCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: DEVQTSVHLAPQHGSFLIGEATL*SNPSPC Trigger: GCAAGGCGATGGGTTAGACAACAGCGTAGCTTCACC...AATGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | GTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCACCGGATCCCCATGTGTaGCTGACCATCCAACACAAA | + |
|
Preference number: 5 (lower is better) Translates to: VMRFRQVSISLRSMVLFSPDPHV*LTIQHK Trigger: TTTGTGTTGGATGGTCAGCAACACATGGGGATCCGG...TGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | GCCGCTGGAGTTAGTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATACCTGTCCGCCAACATaGGGATCTACAGAATTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: AAGVSDEVQTSVHLAPQHTCPPT*GSTEFN Trigger: GTTAAATTCTGTAGATCCCAATGTTGGCGGACAGGT...ATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATCACTAACTCCAGCGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 |
||
| CDS-3UTR CAA 90 bp | TCTCCAGAGGATCTTTGCATGGACAAAATTGTCTCGATGAGCCCGTCGCTTCACTGTTCACTTGCAGAATaGTCAGTCCCGTGTCTTGCG | + |
|
Preference number: 5 (lower is better) Translates to: SPEDLCMDKIVSMSPSLHCSLAE*SVPCLA Trigger: CGCAAGACACGGGACTGACAATTCTGCAAGTGAACA...GTGAAGCGACGGGCTCATCGAGACAATTTTGTCCATGCAAAGATCCTCTGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | GATGAGCCCGTCGCTTCACATTTGTGTTCTTGTCCCATTGGTCCTCTGTTGCTTTGTTCACTTGCAGAATaGTCAGTCCCGTGTCTTGCG | + |
|
Preference number: 5 (lower is better) Translates to: DEPVASHLCSCPIGPLLLCSLAE*SVPCLA Trigger: CGCAAGACACGGGACTGACAATTCTGCAAGTGAACA...AAGCAACAGAGGACCAATGGGACAAGAACACAAATGTGAAGCGACGGGCTCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | ATTCTAGCCGCTGGAGTTAGTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGGAAAACCTGCTCGATTaGACTGGTCAATCATGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ILAAGVSDEVQTSVHLAPENLLD*TGQSWA Trigger: AGCCCATGATTGACCAGTCAAATCGAGCAGGTTTTC...CGGAGCGAGATGGACACTTGTCTGAACCTCATCACTAACTCCAGCGGCTAGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028639.13 ENSMUST00000110906.9 ENSMUST00000110907.8 |
||
| CDS-3UTR CAA 90 bp | CCAGAGGATCTTTGCATGGACAAAATTGTCTCGATGAGCCCGTCGCTTCACATTCCGGATCCCCATGTGTaGCTGACCATCCAACACAAA | + |
|
Preference number: 5 (lower is better) Translates to: PEDLCMDKIVSMSPSLHIPDPHV*LTIQHK Trigger: TTTGTGTTGGATGGTCAGCAACACATGGGGATCCGG...AATGTGAAGCGACGGGCTCATCGAGACAATTTTGTCCATGCAAAGATCCTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | GTTAGTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCCGGATCCCCATGTGTaGCTGACCATCCAACACAAA | + |
|
Preference number: 5 (lower is better) Translates to: VSDEVQTSVHLAPQHGSFPDPHV*LTIQHK Trigger: TTTGTGTTGGATGGTCAGCAACACATGGGGATCCGG...AAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATCACTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | GTTAGTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTGGCTCACTGCTCGATTaGACTGGTCAATCATGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VSDEVQTSVHLAPQHGSFGSLLD*TGQSWA Trigger: AGCCCATGATTGACCAGTCAAATCGAGCAGTGAGCC...AAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATCACTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | TGTGCGTTGAGGAAAGCTGCCCAACTTAAGATTGTTTTGTCCACAGCCAAGGCTGGCTCACTGCTCGATTaGACTGGTCAATCATGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CALRKAAQLKIVLSTAKAGSLLD*TGQSWA Trigger: AGCCCATGATTGACCAGTCAAATCGAGCAGTGAGCC...AGCCTTGGCTGTGGACAAAACAATCTTAAGTTGGGCAGCTTTCCTCAACGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | GGATCTTTGCATGGACAAAATTGTCTCGATGAGCCCGTCGCTTCACATTTGTGTCTTTTCAAGGCGTCGTaGACAGCAGATCCCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GSLHGQNCLDEPVASHLCLFKAS*TADPML Trigger: CAGCATGGGATCTGCTGTCAACGACGCCTTGAAAAG...ACACAAATGTGAAGCGACGGGCTCATCGAGACAATTTTGTCCATGCAAAGATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS-3UTR CAA 90 bp | AAAATATACCACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAAGACAGTTCGGCGCGAACCTGCTaGGCGAAGACCGCGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KIYHSLFWIVNSLMNQDSSARTC*AKTAMS Trigger: GGACATCGCGGTCTTCGCCAAGCAGGTTCGCGCCGA...ACTGTCTTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTGGTATATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS-3UTR CAA 90 bp | ATGGACAAAATTGTCTCGATGAGCCCGTCGCTTCACATTTGTGTTCTTGTCCCATGTGGTCGGCGAGATTaGTGGAGGAGCCTGAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: MDKIVSMSPSLHICVLVPCGRRD*WRSLKV Trigger: AACTTTCAGGCTCCTCCACAAATCTCGCCGACCACA...TGGGACAAGAACACAAATGTGAAGCGACGGGCTCATCGAGACAATTTTGTCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS-3UTR CAA 90 bp | CACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAAGACAGTCATTCTTTTCGGAGTGCGTTGAGGTaGCGTCATCGTGGTCTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: HSLFWIVNSLMNQDSHSFRSALR*RHRGLA Trigger: GGCGAGACCACGATGACGCAACCTCAACGCACTCCG...AAAAGAATGACTGTCTTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS-3UTR CAA 90 bp | TCTCCAGAGGATCTTTGCATGGACAAAATTGTCTCGATGAGCCCGTCGCTTCACTTCTTCTGGCGTTTTTaGTCCTTGTCTGGATCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: SPEDLCMDKIVSMSPSLHFFWRF*SLSGSS Trigger: CGACGATCCAGACAAGGACAAAAAACGCCAGAAGAA...GTGAAGCGACGGGCTCATCGAGACAATTTTGTCCATGCAAAGATCCTCTGGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS-3UTR CAA 90 bp | CCAGAGGATCTTTGCATGGACAAAATTGTCTCGATGAGCCCGTCGCTTCACATTTGTTCACTTGCAGAATaGTCAGTCCCGTGTCTTGCG | + |
|
Preference number: 5 (lower is better) Translates to: PEDLCMDKIVSMSPSLHICSLAE*SVPCLA Trigger: CGCAAGACACGGGACTGACAATTCTGCAAGTGAACA...AATGTGAAGCGACGGGCTCATCGAGACAATTTTGTCCATGCAAAGATCCTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | GTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCAGAAAACCTGCTCGATTaGACTGGTCAATCATGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VMRFRQVSISLRSMVLFSENLLD*TGQSWA Trigger: AGCCCATGATTGACCAGTCAAATCGAGCAGGTTTTC...TGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028639.13 ENSMUST00000110906.9 ENSMUST00000110907.8 |
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| CDS CCA 90 bp | CGGCGAGATTTGTGGAGGAGCCTGAAAGTTCTTCATGATCTGACTTaGAGCTTCCATCTCTCTCATCAATCACGAGGTCAATGGGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: RRDLWRSLKVLHDLT*SFHLSHQSRGQWAF Trigger: AAATGCCCATTGACCTCGTGATTGATGAGAGAGATGGAAGCTCCAAGTCAGATCATGAAGAACTTTCAGGCTCCTCCACAAATCTCGCCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS-3UTR CAA 90 bp | CCGCCAACATTGGGATCTACAGAATTTAACATTGTGGGGCTCTGTGCTGACATAACGGGTGCCCATAGATaGCGTCCTTGTCTCTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PPTLGSTEFNIVGLCADITGAHR*RPCLFS Trigger: TGAAAAGAGACAAGGACGCAATCTATGGGCACCCGT...TATGTCAGCACAGAGCCCCACAATGTTAAATTCTGTAGATCCCAATGTTGGCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS-3UTR CAA 90 bp | TTGAGGAAAGCTGCCCAACTTAAGATTGTTTTGTCCACAGCCAAGGCTCAGAACACGGGTGCCCATAGATaGCGTCCTTGTCTCTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LRKAAQLKIVLSTAKAQNTGAHR*RPCLFS Trigger: TGAAAAGAGACAAGGACGCAATCTATGGGCACCCGT...GTTCTGAGCCTTGGCTGTGGACAAAACAATCTTAAGTTGGGCAGCTTTCCTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | AGGTTTAAAATATACCACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAATCGGCGCGAACCTGCTaGGCGAAGACCGCGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RFKIYHSLFWIVNSLMNQSARTC*AKTAMS Trigger: GGACATCGCGGTCTTCGCCAAGCAGGTTCGCGCCGA...TTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTGGTATATTTTAAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | GGTCAAAGTTCAGAGAGTCTTAAAATAGTTTTTGCGTGTGTTTCCTTCTTCCTTCGGAGTGCGTTGAGGTaGCGTCATCGTGGTCTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: GQSSESLKIVFACVSFFLRSALR*RHRGLA Trigger: GGCGAGACCACGATGACGCAACCTCAACGCACTCCG...AAGGAAGAAGGAAACACACGCAAAAACTATTTTAAGACTCTCTGAACTTTGACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | GACCCCATGGACATACAATACCAATTCCACAGCAGATCTGATACTAGCAAAAACGGTGAAGCTACGCTGTaGTCTAACCCATCGCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: DPMDIQYQFHSRSDTSKNGEATL*SNPSPC Trigger: GCAAGGCGATGGGTTAGACAACAGCGTAGCTTCACC...GTTTTTGCTAGTATCAGATCTGCTGTGGAATTGGTATTGTATGTCCATGGGGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | GAAAAGAGGACCCCATGGACATACAATACCAATTCCACAGCAGATCTGATACTAGGTGAAGCTACGCTGTaGTCTAACCCATCGCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: EKRTPWTYNTNSTADLILGEATL*SNPSPC Trigger: GCAAGGCGATGGGTTAGACAACAGCGTAGCTTCACC...TAGTATCAGATCTGCTGTGGAATTGGTATTGTATGTCCATGGGGTCCTCTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | ATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCATTGTTCTTCTGGCGTTTTTaGTCCTTGTCTGGATCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: MRFRQVSISLRSMVLFSLFFWRF*SLSGSS Trigger: CGACGATCCAGACAAGGACAAAAAACGCCAGAAGAA...CAATGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | GTTATAACTCTCGGAGTCTTTCTCCAGAGGATCTTTGCATGGACAAAATTGTCTGGGGAGGAGTGTAACTaGGCTGGGCCATACCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: VITLGVFLQRIFAWTKLSGEECN*AGPYPF Trigger: GAATGGGTATGGCCCAGCCAAGTTACACTCCTCCCC...AGACAATTTTGTCCATGCAAAGATCCTCTGGAGAAAGACTCCGAGAGTTATAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 |
||
| CDS-3UTR CAA 90 bp | TTGAGGAAAGCTGCCCAACTTAAGATTGTTTTGTCCACAGCCAAGGCTCAGAACGGTGGTGGGGATGGCTaGGCAAATATGAATGCATTG | + |
|
Preference number: 5 (lower is better) Translates to: LRKAAQLKIVLSTAKAQNGGGDG*ANMNAL Trigger: CAATGCATTCATATTTGCCAAGCCATCCCCACCACC...GTTCTGAGCCTTGGCTGTGGACAAAACAATCTTAAGTTGGGCAGCTTTCCTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 |
||
| CDS-3UTR CAA 90 bp | TCCGCAGCATGGTTCTTTTCTCATTGGCCCAACAGGTTTAAAATATACCACAGTCTTTTCAAGGCGTCGTaGACAGCAGATCCCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SAAWFFSHWPNRFKIYHSLFKAS*TADPML Trigger: CAGCATGGGATCTGCTGTCAACGACGCCTTGAAAAG...ACTGTGGTATATTTTAAACCTGTTGGGCCAATGAGAAAAGAACCATGCTGCGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | TATAACTCTCGGAGTCTTTCTCCAGAGGATCTTTGCATGGACAAAATTGTCTCGTGTGGTCGGCGAGATTaGTGGAGGAGCCTGAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: YNSRSLSPEDLCMDKIVSCGRRD*WRSLKV Trigger: AACTTTCAGGCTCCTCCACAAATCTCGCCGACCACA...CGAGACAATTTTGTCCATGCAAAGATCCTCTGGAGAAAGACTCCGAGAGTTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | TATGCTACAGTAGTTATAACTCTCGGAGTCTTTCTCCAGAGGATCTTTGCATGGTGTGGTCGGCGAGATTaGTGGAGGAGCCTGAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: YATVVITLGVFLQRIFAWCGRRD*WRSLKV Trigger: AACTTTCAGGCTCCTCCACAAATCTCGCCGACCACA...CCATGCAAAGATCCTCTGGAGAAAGACTCCGAGAGTTATAACTACTGTAGCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | ATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTCTCATTGATATTTGTCGCGACTTaGGGGAATATGCCTCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: MRFRQVSISLRSMVLFSLIFVAT*GNMPLF Trigger: GAAAAGAGGCATATTCCCCAAAGTCGCGACAAATAT...CAATGAGAAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | TGTGCGTTGAGGAAAGCTGCCCAACTTAAGATTGTTTTGTCCACAGCCAAGGCTATATTTGTCGCGACTTaGGGGAATATGCCTCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CALRKAAQLKIVLSTAKAIFVAT*GNMPLF Trigger: GAAAAGAGGCATATTCCCCAAAGTCGCGACAAATAT...AGCCTTGGCTGTGGACAAAACAATCTTAAGTTGGGCAGCTTTCCTCAACGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | TCCGCAGCATGGTTCTTTTCTCATTGGCCCAACAGGTTTAAAATATACCACAGTTGTTCACTTGCAGAATaGTCAGTCCCGTGTCTTGCG | + |
|
Preference number: 5 (lower is better) Translates to: SAAWFFSHWPNRFKIYHSCSLAE*SVPCLA Trigger: CGCAAGACACGGGACTGACAATTCTGCAAGTGAACA...ACTGTGGTATATTTTAAACCTGTTGGGCCAATGAGAAAAGAACCATGCTGCGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | GTTATAACTCTCGGAGTCTTTCTCCAGAGGATCTTTGCATGGACAAAATTGTCTCCGGATCCCCATGTGTaGCTGACCATCCAACACAAA | + |
|
Preference number: 5 (lower is better) Translates to: VITLGVFLQRIFAWTKLSPDPHV*LTIQHK Trigger: TTTGTGTTGGATGGTCAGCAACACATGGGGATCCGG...AGACAATTTTGTCCATGCAAAGATCCTCTGGAGAAAGACTCCGAGAGTTATAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | GTTATAACTCTCGGAGTCTTTCTCCAGAGGATCTTTGCATGGACAAAATTGTCTCCATACCCATTCCCATaGGACCACCCTGAGAAACGT | + |
|
Preference number: 5 (lower is better) Translates to: VITLGVFLQRIFAWTKLSPYPFP*DHPEKR Trigger: ACGTTTCTCAGGGTGGTCCAATGGGAATGGGTATGG...AGACAATTTTGTCCATGCAAAGATCCTCTGGAGAAAGACTCCGAGAGTTATAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 |
||
| CDS-3UTR CAA 90 bp | AGACCGAACTCTGTACGAAGTTTGTTACAGTATTCTCTTGCTCCTTTTTATCCCACGGGTGCCCATAGATaGCGTCCTTGTCTCTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RPNSVRSLLQYSLAPFYPTGAHR*RPCLFS Trigger: TGAAAAGAGACAAGGACGCAATCTATGGGCACCCGT...GGGATAAAAAGGAGCAAGAGAATACTGTAACAAACTTCGTACAGAGTTCGGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | CACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAAGACAGTCATTCTTTTTGTGGTCGGCGAGATTaGTGGAGGAGCCTGAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: HSLFWIVNSLMNQDSHSFCGRRD*WRSLKV Trigger: AACTTTCAGGCTCCTCCACAAATCTCGCCGACCACA...AAAAGAATGACTGTCTTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | AATAATCACAGCTGTCTGGAGTTTCATATTAAGTGTCACATCTGGTCAAAGTTCGGTGAAGCTACGCTGTaGTCTAACCCATCGCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: NNHSCLEFHIKCHIWSKFGEATL*SNPSPC Trigger: GCAAGGCGATGGGTTAGACAACAGCGTAGCTTCACC...GAACTTTGACCAGATGTGACACTTAATATGAAACTCCAGACAGCTGTGATTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | CTTCACATTTGTGTTCTTGTCCCATTGGTCCTCTGTTGCTTGATGAAAAATGACTGTTCACTTGCAGAATaGTCAGTCCCGTGTCTTGCG | + |
|
Preference number: 5 (lower is better) Translates to: LHICVLVPLVLCCLMKNDCSLAE*SVPCLA Trigger: CGCAAGACACGGGACTGACAATTCTGCAAGTGAACA...GTCATTTTTCATCAAGCAACAGAGGACCAATGGGACAAGAACACAAATGTGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | CACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAAGACAGTCATTCTTTTCCGGATCCCCATGTGTaGCTGACCATCCAACACAAA | + |
|
Preference number: 5 (lower is better) Translates to: HSLFWIVNSLMNQDSHSFPDPHV*LTIQHK Trigger: TTTGTGTTGGATGGTCAGCAACACATGGGGATCCGG...AAAAGAATGACTGTCTTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | AATAATCACAGCTGTCTGGAGTTTCATATTAAGTGTCACATCTGGTCAAAGTTCCTTTTCAAGGCGTCGTaGACAGCAGATCCCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NNHSCLEFHIKCHIWSKFLFKAS*TADPML Trigger: CAGCATGGGATCTGCTGTCAACGACGCCTTGAAAAG...GAACTTTGACCAGATGTGACACTTAATATGAAACTCCAGACAGCTGTGATTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | TCTCATTGGCCCAACAGGTTTAAAATATACCACAGTCTCTTCTGGATAGTGAATACGGGTGCCCATAGATaGCGTCCTTGTCTCTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SHWPNRFKIYHSLFWIVNTGAHR*RPCLFS Trigger: TGAAAAGAGACAAGGACGCAATCTATGGGCACCCGT...ATTCACTATCCAGAAGAGACTGTGGTATATTTTAAACCTGTTGGGCCAATGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | TACCACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAAGACAGTCATTCTTTCTTCTGGCGTTTTTaGTCCTTGTCTGGATCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: YHSLFWIVNSLMNQDSHSFFWRF*SLSGSS Trigger: CGACGATCCAGACAAGGACAAAAAACGCCAGAAGAA...AGAATGACTGTCTTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTGGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | GTTAGTGATGAGGTTCAGACAAGTGTCCATCTCGCTCCGCAGCATGGTTCTTTTATTCTTCTTCTGGCATaGATAAACCAGTTGTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: VSDEVQTSVHLAPQHGSFILLLA*INQLFT Trigger: AGTGAACAACTGGTTTATCAATGCCAGAAGAAGAAT...AAAAGAACCATGCTGCGGAGCGAGATGGACACTTGTCTGAACCTCATCACTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | AGTTCAGAGAGTCTTAAAATAGTTTTTGCGTGTGTTTCCTTCTTCCTTGAGTTCCCGGATCCCCATGTGTaGCTGACCATCCAACACAAA | + |
|
Preference number: 5 (lower is better) Translates to: SSESLKIVFACVSFFLEFPDPHV*LTIQHK Trigger: TTTGTGTTGGATGGTCAGCAACACATGGGGATCCGG...GAACTCAAGGAAGAAGGAAACACACGCAAAAACTATTTTAAGACTCTCTGAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | AGTTCAGAGAGTCTTAAAATAGTTTTTGCGTGTGTTTCCTTCTTCCTTGAGTTCCCATACCCATTCCCATaGGACCACCCTGAGAAACGT | + |
|
Preference number: 5 (lower is better) Translates to: SSESLKIVFACVSFFLEFPYPFP*DHPEKR Trigger: ACGTTTCTCAGGGTGGTCCAATGGGAATGGGTATGG...GAACTCAAGGAAGAAGGAAACACACGCAAAAACTATTTTAAGACTCTCTGAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 |
||
| CDS-3UTR CAA 90 bp | GGTCAAAGTTCAGAGAGTCTTAAAATAGTTTTTGCGTGTGTTTCCTTCTTCCTTGGCTCACTGCTCGATTaGACTGGTCAATCATGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GQSSESLKIVFACVSFFLGSLLD*TGQSWA Trigger: AGCCCATGATTGACCAGTCAAATCGAGCAGTGAGCC...AAGGAAGAAGGAAACACACGCAAAAACTATTTTAAGACTCTCTGAACTTTGACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | AGGTTTAAAATATACCACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAACTTTTCAAGGCGTCGTaGACAGCAGATCCCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RFKIYHSLFWIVNSLMNQLFKAS*TADPML Trigger: CAGCATGGGATCTGCTGTCAACGACGCCTTGAAAAG...TTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTGGTATATTTTAAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS-3UTR CAA 90 bp | AAAATATACCACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAAGACAGTACGGGTGCCCATAGATaGCGTCCTTGTCTCTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KIYHSLFWIVNSLMNQDSTGAHR*RPCLFS Trigger: TGAAAAGAGACAAGGACGCAATCTATGGGCACCCGT...ACTGTCTTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTGGTATATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | TCCGCAGCATGGTTCTTTTCTCATTGGCCCAACAGGTTTAAAATATACCACAGTATATTTGTCGCGACTTaGGGGAATATGCCTCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SAAWFFSHWPNRFKIYHSIFVAT*GNMPLF Trigger: GAAAAGAGGCATATTCCCCAAAGTCGCGACAAATAT...ACTGTGGTATATTTTAAACCTGTTGGGCCAATGAGAAAAGAACCATGCTGCGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS-3UTR CAA 90 bp | GTATGTGCGTTGAGGAAAGCTGCCCAACTTAAGATTGTTTTGTCCACAGCCAAGATTCTTCTTCTGGCATaGATAAACCAGTTGTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: VCALRKAAQLKIVLSTAKILLLA*INQLFT Trigger: AGTGAACAACTGGTTTATCAATGCCAGAAGAAGAAT...CTTGGCTGTGGACAAAACAATCTTAAGTTGGGCAGCTTTCCTCAACGCACATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS-3UTR CAA 90 bp | AAAGACCGAACTCTGTACGAAGTTTGTTACAGTATTCTCTTGCTCCTTTTTATCGGTGGTGGGGATGGCTaGGCAAATATGAATGCATTG | + |
|
Preference number: 5 (lower is better) Translates to: KDRTLYEVCYSILLLLFIGGGDG*ANMNAL Trigger: CAATGCATTCATATTTGCCAAGCCATCCCCACCACC...GATAAAAAGGAGCAAGAGAATACTGTAACAAACTTCGTACAGAGTTCGGTCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 |
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| CDS-3UTR CAA 90 bp | TGTTTATGCTACAGTAGTTATAACTCTCGGAGTCTTTCTCCAGAGGATCTTTGCCTACAGAATTTAACATaGTGGGGCTCTGTGCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: CLCYSSYNSRSLSPEDLCLQNLT*WGSVLT Trigger: TGTCAGCACAGAGCCCCACAATGTTAAATTCTGTAG...GCAAAGATCCTCTGGAGAAAGACTCCGAGAGTTATAACTACTGTAGCATAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 |
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| CDS-3UTR CAA 90 bp | AGGTTTAAAATATACCACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAAACGGGTGCCCATAGATaGCGTCCTTGTCTCTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RFKIYHSLFWIVNSLMNQTGAHR*RPCLFS Trigger: TGAAAAGAGACAAGGACGCAATCTATGGGCACCCGT...TTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTGGTATATTTTAAACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS-3UTR CAA 90 bp | ATAATCACAGCTGTCTGGAGTTTCATATTAAGTGTCACATCTGGTCAAAGTTCATTCTTCTGGCGTTTTTaGTCCTTGTCTGGATCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: IITAVWSFILSVTSGQSSFFWRF*SLSGSS Trigger: CGACGATCCAGACAAGGACAAAAAACGCCAGAAGAA...TGAACTTTGACCAGATGTGACACTTAATATGAAACTCCAGACAGCTGTGATTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS-3UTR CAA 90 bp | AAAGACCGAACTCTGTACGAAGTTTGTTACAGTATTCTCTTGCTCCTTTTTATCTTCTTCTGGCGTTTTTaGTCCTTGTCTGGATCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: KDRTLYEVCYSILLLLFIFFWRF*SLSGSS Trigger: CGACGATCCAGACAAGGACAAAAAACGCCAGAAGAA...GATAAAAAGGAGCAAGAGAATACTGTAACAAACTTCGTACAGAGTTCGGTCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | AGACCGAACTCTGTACGAAGTTTGTTACAGTATTCTCTTGCTCCTTTTTATCCCATATTTGTCGCGACTTaGGGGAATATGCCTCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RPNSVRSLLQYSLAPFYPIFVAT*GNMPLF Trigger: GAAAAGAGGCATATTCCCCAAAGTCGCGACAAATAT...GGGATAAAAAGGAGCAAGAGAATACTGTAACAAACTTCGTACAGAGTTCGGTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | TATCCCCCAAGCTTTGAGTTCCTGATAGAATCCTACTTATGGTGCAACGACCATATTCTTCTTCTGGCATaGATAAACCAGTTGTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: YPPSFEFLIESYLWCNDHILLLA*INQLFT Trigger: AGTGAACAACTGGTTTATCAATGCCAGAAGAAGAAT...ATGGTCGTTGCACCATAAGTAGGATTCTATCAGGAACTCAAAGCTTGGGGGATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | AGGTTTAAAATATACCACAGTCTCTTCTGGATAGTGAATTCACTGATGAACCAATTCTTCTGGCGTTTTTaGTCCTTGTCTGGATCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: RFKIYHSLFWIVNSLMNQFFWRF*SLSGSS Trigger: CGACGATCCAGACAAGGACAAAAAACGCCAGAAGAA...TTGGTTCATCAGTGAATTCACTATCCAGAAGAGACTGTGGTATATTTTAAACCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS-3UTR CAA 90 bp | GACCCCATGGACATACAATACCAATTCCACAGCAGATCTGATACTAGCAAAAACATTCTTCTTCTGGCATaGATAAACCAGTTGTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: DPMDIQYQFHSRSDTSKNILLLA*INQLFT Trigger: AGTGAACAACTGGTTTATCAATGCCAGAAGAAGAAT...GTTTTTGCTAGTATCAGATCTGCTGTGGAATTGGTATTGTATGTCCATGGGGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028639.13 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | AAACAATTAAAAGACCGAACTCTGTACGAAGTTTGTTACAGTATTCTCTTGCTCGAAAACCTGCTCGATTaGACTGGTCAATCATGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KQLKDRTLYEVCYSILLLENLLD*TGQSWA Trigger: AGCCCATGATTGACCAGTCAAATCGAGCAGGTTTTC...GAGCAAGAGAATACTGTAACAAACTTCGTACAGAGTTCGGTCTTTTAATTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028639.13 ENSMUST00000110906.9 ENSMUST00000110907.8 |
||
| CDS-3UTR CAA 90 bp | AAAGACCGAACTCTGTACGAAGTTTGTTACAGTATTCTCTTGCTCCTTTTTATCATATTTGTCGCGACTTaGGGGAATATGCCTCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KDRTLYEVCYSILLLLFIIFVAT*GNMPLF Trigger: GAAAAGAGGCATATTCCCCAAAGTCGCGACAAATAT...GATAAAAAGGAGCAAGAGAATACTGTAACAAACTTCGTACAGAGTTCGGTCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS-3UTR CAA 90 bp | TGTTTATGCTACAGTAGTTATAACTCTCGGAGTCTTTCTCCAGAGGATCTTTGCATTCTTCTTCTGGCATaGATAAACCAGTTGTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: CLCYSSYNSRSLSPEDLCILLLA*INQLFT Trigger: AGTGAACAACTGGTTTATCAATGCCAGAAGAAGAAT...GCAAAGATCCTCTGGAGAAAGACTCCGAGAGTTATAACTACTGTAGCATAAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS CCA 72 bp | GGGGGATCGGCCGCGGCGCGTGAGGGTCTCCGTACATaGAAGCGGGAACCCCTACTCCGTCCATCCCGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: GGSAAAREGLRT*KREPLLRPSRR Trigger: ACGGCGGGATGGACGGAGTAGGGGTTCCCGCTTCCATGTACGGAGACCCTCACGCGCCGCGGCCGATCCCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS GCA 72 bp | AGACGTCTCCGCCGGCCACTCCGGGTTCCCGGGGAGTaGAGGTCGCCAGCTCGCACTTCTCAAAAACCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: RRLRRPLRVPGE*RSPARTSQKPE Trigger: CTCTGGTTTTTGAGAAGTGCGAGCTGGCGACCTGCACTCCCCGGGAACCCGGAGTGGCCGGCGGAGACGTCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS CCA 72 bp | GGGGTGCCTGCGGAGTGCGTTGAGGTTGCGTCATCGTaGTCTCGCCAGGATGAAGGGTTGTGGTCGGCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: GVPAECVEVASS*SRQDEGLWSAR Trigger: TCTCGCCGACCACAACCCTTCATCCTGGCGAGACCACGATGACGCAACCTCAACGCACTCCGCAGGCACCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS CAA 90 bp | AAGCATGGCCCCCACTGGAGGGTCCTGGGGTGCCTGCGGAGTGCGTaGAGGTTGCGTCATCGTGGTCTCGCCAGGATGAAGGGTTGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: KHGPHWRVLGCLRSA*RLRHRGLARMKGCG Trigger: ACCACAACCCTTCATCCTGGCGAGACCACGATGACGCAACCTCAACGCACTCCGCAGGCACCCCAGGACCCTCCAGTGGGGGCCATGCTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
||
| CDS CCA 72 bp | TTTCAAGGCGTCGTTGACAGCAGATCCCATGCTGGCTaGCATGACATTGGGGTGCGGGGCGTGCGCGCCGTA | + |
|
Preference number: 6 (lower is better) Translates to: FQGVVDSRSHAG*HDIGVRGVRAV Trigger: TACGGCGCGCACGCCCCGCACCCCAATGTCATGCCAGCCAGCATGGGATCTGCTGTCAACGACGCCTTGAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS GCA 72 bp | ACATATAGTGCCACTGCCCATCCATGCCCATATTCATaGCCATTCCACTCATGGGTCCTGCAGGCCGGATCC | + |
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Preference number: 6 (lower is better) Translates to: TYSATAHPCPYS*PFHSWVLQAGS Trigger: GGATCCGGCCTGCAGGACCCATGAGTGGAATGGGCATGAATATGGGCATGGATGGGCAGTGGCACTATATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074285.8 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS CAA 72 bp | TCGTCGTCATCACCTGTGCCAGGTGAAGCTACGCTGTaGTCTAACCCATCGCCTTGCTCACTGCTGTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: SSSSPVPGEATL*SNPSPCSLLLS Trigger: AGACAACAGCAGTGAGCAAGGCGATGGGTTAGACAACAGCGTAGCTTCACCTGGCACAGGTGATGACGACGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS CCA 72 bp | CTCGCCAGGATGAAGGGTTGTGGTCGGCGAGATTTGTaGAGGAGCCTGAAAGTTCTTCATGATCTGACTTGG | + |
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Preference number: 6 (lower is better) Translates to: LARMKGCGRRDL*RSLKVLHDLTW Trigger: CCAAGTCAGATCATGAAGAACTTTCAGGCTCCTCCACAAATCTCGCCGACCACAACCCTTCATCCTGGCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS CAA 72 bp | GGTCTCGCCAGGATGAAGGGTTGTGGTCGGCGAGATTaGTGGAGGAGCCTGAAAGTTCTTCATGATCTGACT | + |
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Preference number: 6 (lower is better) Translates to: GLARMKGCGRRD*WRSLKVLHDLT Trigger: AGTCAGATCATGAAGAACTTTCAGGCTCCTCCACAAATCTCGCCGACCACAACCCTTCATCCTGGCGAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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| CDS CCA 72 bp | TTGTGGAGGAGCCTGAAAGTTCTTCATGATCTGACTTaGAGCTTCCATCTCTCTCATCAATCACGAGGTCAA | + |
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Preference number: 6 (lower is better) Translates to: LWRSLKVLHDLT*SFHLSHQSRGQ Trigger: TTGACCTCGTGATTGATGAGAGAGATGGAAGCTCCAAGTCAGATCATGAAGAACTTTCAGGCTCCTCCACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028639.13 ENSMUST00000074285.8 ENSMUST00000102538.11 ENSMUST00000110906.9 ENSMUST00000110907.8 ENSMUST00000110908.9 |
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