Pregenerated sensors for MEIS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020160Ensembl transcript IDs: ENSMUST00000068264.14, ENSMUST00000102878.11, ENSMUST00000144988.8, ENSMUST00000177357.4, ENSMUST00000177417.8, ENSMUST00000185131.8
Found 420 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCCAGTGTGGTGCCAACAGAGCTTTGATGGAGCTGAGAGCAGAGTaGTATTTCAGAGGCAGGGTTCAACCCTGCAGCATCACCCCAGGT | + |
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Preference number: 1 (lower is better) Translates to: AQCGANRALMELRAE*YFRGRVQPCSITPG Trigger: ACCTGGGGTGATGCTGCAGGGTTGAACCCTGCCTCTGAAATACCACTCTGCTCTCAGCTCCATCAAAGCTCTGTTGGCACCACACTGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
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| 3UTR CCA 90 bp | TCTGATGCCCATGTGCTGCTGACCGTCCATTACAAAACCTCCCATTaGCTGTCCATCAGGGTTATAAGGTGTCCCTTGGCTGACAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: SDAHVLLTVHYKTSH*LSIRVIRCPLADRQ Trigger: CTGCCTGTCAGCCAAGGGACACCTTATAACCCTGATGGACAGCCAATGGGAGGTTTTGTAATGGACGGTCAGCAGCACATGGGCATCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177357.4 |
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| 3UTR CCA 90 bp | GGGCATTTTAAGAAAAGAAGACACTGGAACCTGACTAACTGGGTATaGGCCCAGTGTGGTGCCAACAGAGCTTTGATGGAGCTGAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: GHFKKRRHWNLTNWV*AQCGANRALMELRA Trigger: TGCTCTCAGCTCCATCAAAGCTCTGTTGGCACCACACTGGGCCCATACCCAGTTAGTCAGGTTCCAGTGTCTTCTTTTCTTAAAATGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
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| 3UTR CCA 90 bp | TCTGATGCCCATGTGCTGCTGACCGTCCATTACAAAACCTCCCATTaGCTGTCCATCAGGGTTATAAGGTGTCCCTTGGCTGACTACAAA | + |
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Preference number: 1 (lower is better) Translates to: SDAHVLLTVHYKTSH*LSIRVIRCPLADYK Trigger: TTTGTAGTCAGCCAAGGGACACCTTATAACCCTGATGGACAGCCAATGGGAGGTTTTGTAATGGACGGTCAGCAGCACATGGGCATCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
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| 3UTR TCA 90 bp | TCTTGCTTTGAGGGGCCTCTTGTCTTCTGCATGGATTGCTCTAGTTaGTGGAAAGTGACGGGCGTATTGTTTCTGAGAGCCATAAGCTCC | + |
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Preference number: 1 (lower is better) Translates to: SCFEGPLVFCMDCSS*WKVTGVLFLRAISS Trigger: GGAGCTTATGGCTCTCAGAAACAATACGCCCGTCACTTTCCATCAACTAGAGCAATCCATGCAGAAGACAAGAGGCCCCTCAAAGCAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
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| 3UTR CCA 90 bp | ATGATGCTTGATGTGACAGTTAGGCTTCTAAACACACACGGCCTTTaGGTTTCCATGCCTCCTCCTACCAGTCTCCTTAAGACACTGCCT | + |
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Preference number: 1 (lower is better) Translates to: MMLDVTVRLLNTHGL*VSMPPPTSLLKTLP Trigger: AGGCAGTGTCTTAAGGAGACTGGTAGGAGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAGCCTAACTGTCACATCAAGCATCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
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| 3UTR CCA 90 bp | CATCATGGGCATTTTAAGAAAAGAAGACACTGGAACCTGACTAACTaGGTATGGGCCCAGTGTGGTGCCAACAGAGCTTTGATGGAGCTG | + |
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Preference number: 1 (lower is better) Translates to: HHGHFKKRRHWNLTN*VWAQCGANRALMEL Trigger: CAGCTCCATCAAAGCTCTGTTGGCACCACACTGGGCCCATACCCAGTTAGTCAGGTTCCAGTGTCTTCTTTTCTTAAAATGCCCATGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
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| 3UTR GCA 90 bp | CATGCATCAACTGCGGTTAGACAGATTTATGGCACTTTGGGGACATaGTCTTTCCTCTCCTTGCACTGCTGCAGACTGCTTACATTTTGC | + |
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Preference number: 1 (lower is better) Translates to: HASTAVRQIYGTLGT*SFLSLHCCRLLTFC Trigger: GCAAAATGTAAGCAGTCTGCAGCAGTGCAAGGAGAGGAAAGAGCATGTCCCCAAAGTGCCATAAATCTGTCTAACCGCAGTTGATGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
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| 3UTR CCA 90 bp | TTTGTCTGCTGGTTCCATCATGGGCATTTTAAGAAAAGAAGACACTaGAACCTGACTAACTGGGTATGGGCCCAGTGTGGTGCCAACAGA | + |
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Preference number: 1 (lower is better) Translates to: FVCWFHHGHFKKRRH*NLTNWVWAQCGANR Trigger: TCTGTTGGCACCACACTGGGCCCATACCCAGTTAGTCAGGTTCCAGTGTCTTCTTTTCTTAAAATGCCCATGATGGAACCAGCAGACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
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| 3UTR TCA 90 bp | GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGCACGCACATGGCTaGAATCCTAGGCAAGAAGAAAGATTCTTCTGCCTGATAGTTATT | + |
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Preference number: 1 (lower is better) Translates to: ERERERERERAHAHG*NPRQEERFFCLIVI Trigger: AATAACTATCAGGCAGAAGAATCTTTCTTCTTGCCTAGGATTTCAGCCATGTGCGTGCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
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| 3UTR TCA 90 bp | AAATTACAGAAAGGCAACAGTGTGGTTCTGACTATGGCAATCCTATaGAAGCCAGGGAACATTGTGATGAAGGAAGGGACTGGGGCCTTG | + |
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Preference number: 1 (lower is better) Translates to: KLQKGNSVVLTMAIL*KPGNIVMKEGTGAL Trigger: CAAGGCCCCAGTCCCTTCCTTCATCACAATGTTCCCTGGCTTTCATAGGATTGCCATAGTCAGAACCACACTGTTGCCTTTCTGTAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
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| 3UTR GCA 90 bp | TCCTTGCACTGCTGCAGACTGCTTACATTTTGCAAATCAGTCTGTTaGTATGACAACCCACTCCCCCACCTCCTGACTGTTTCTTGTTTT | + |
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Preference number: 1 (lower is better) Translates to: SLHCCRLLTFCKSVC*YDNPLPHLLTVSCF Trigger: AAAACAAGAAACAGTCAGGAGGTGGGGGAGTGGGTTGTCATAGCAACAGACTGATTTGCAAAATGTAAGCAGTCTGCAGCAGTGCAAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
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| 3UTR GCA 90 bp | TTAGACAGATTTATGGCACTTTGGGGACATGCTCTTTCCTCTCCTTaGACTGCTGCAGACTGCTTACATTTTGCAAATCAGTCTGTTGCT | + |
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Preference number: 1 (lower is better) Translates to: LDRFMALWGHALSSP*TAADCLHFANQSVA Trigger: AGCAACAGACTGATTTGCAAAATGTAAGCAGTCTGCAGCAGTGCAAGGAGAGGAAAGAGCATGTCCCCAAAGTGCCATAAATCTGTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
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| 3UTR CCA 90 bp | TTCAGAGGCAGGGTTCAACCCTGCAGCATCACCCCAGGTATAATTTaGTCGCTGCCTTTGCTACCATGTTATAATACAAAACAAATCCTA | + |
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Preference number: 1 (lower is better) Translates to: FRGRVQPCSITPGII*SLPLLPCYNTKQIL Trigger: TAGGATTTGTTTTGTATTATAACATGGTAGCAAAGGCAGCGACCAAATTATACCTGGGGTGATGCTGCAGGGTTGAACCCTGCCTCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
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| 3UTR CCA 90 bp | CCAAGCTCAATGGAATGCTTTCAGAGTGAATTGTTAAACTTATATTaGACTCCCACCCACAGAAGAAGACCAGCATGTGTTACCCTTGGC | + |
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Preference number: 1 (lower is better) Translates to: PSSMECFQSELLNLY*TPTHRRRPACVTLG Trigger: GCCAAGGGTAACACATGCTGGTCTTCTTCTGTGGGTGGGAGTCCAATATAAGTTTAACAATTCACTCTGAAAGCATTCCATTGAGCTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
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| 3UTR CCA 90 bp | AAGGATGTCAAGCTGGAATCAGAACTGTTTCCCTTGCAGGGCCATTaGACCAGTCCTACCAAGTCTAGTTTTAAACAAAAACACATTGGT | + |
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Preference number: 1 (lower is better) Translates to: KDVKLESELFPLQGH*TSPTKSSFKQKHIG Trigger: ACCAATGTGTTTTTGTTTAAAACTAGACTTGGTAGGACTGGTCCAATGGCCCTGCAAGGGAAACAGTTCTGATTCCAGCTTGACATCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
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| 3UTR CCA 90 bp | ATTTTGATTCATGTGGAAGAAGATAAAAGGATAAGGATGTCAAGCTaGAATCAGAACTGTTTCCCTTGCAGGGCCATTGGACCAGTCCTA | + |
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Preference number: 1 (lower is better) Translates to: ILIHVEEDKRIRMSS*NQNCFPCRAIGPVL Trigger: TAGGACTGGTCCAATGGCCCTGCAAGGGAAACAGTTCTGATTCCAGCTTGACATCCTTATCCTTTTATCTTCTTCCACATGAATCAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
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| 3UTR TCA 90 bp | GTAATAAGACTGTTGATTTCCAAGCTCAATGGAATGCTTTCAGAGTaGATTGTTAAACTTATATTGGACTCCCACCCACAGAAGAAGACC | + |
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Preference number: 1 (lower is better) Translates to: VIRLLISKLNGMLSE*IVKLILDSHPQKKT Trigger: GGTCTTCTTCTGTGGGTGGGAGTCCAATATAAGTTTAACAATTCACTCTGAAAGCATTCCATTGAGCTTGGAAATCAACAGTCTTATTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
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| 3UTR TCA 90 bp | CCGTGTATTTATATCACTAACCAAATCCTGTGTTTTAACTGTACATaGAAAGCTGTTTCAGAAGTGAGCTGCCTTGGGTTATTAAAGCAC | + |
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Preference number: 1 (lower is better) Translates to: PCIYITNQILCFNCT*KAVSEVSCLGLLKH Trigger: GTGCTTTAATAACCCAAGGCAGCTCACTTCTGAAACAGCTTTTCATGTACAGTTAAAACACAGGATTTGGTTAGTGATATAAATACACGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
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| 3UTR GCA 90 bp | AAGCTATTGCAGCTTAAACATGTTATTTTGAACCATTTAGCTGGCTaGCATGCAGAAATTCTGTACAGCTGTTCTGGAAAATTGGTTAAT | + |
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Preference number: 1 (lower is better) Translates to: KLLQLKHVILNHLAG*HAEILYSCSGKLVN Trigger: ATTAACCAATTTTCCAGAACAGCTGTACAGAATTTCTGCATGGCAGCCAGCTAAATGGTTCAAAATAACATGTTTAAGCTGCAATAGCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
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| 3UTR-3UTR GCA 90 bp | GGCTGTCCCATACTCACACCCATTGGGCCACCCCGGGCTACATACTCCCCTGGCTCCATGCATCATCACTaGGGGGTGGTGAGGGTGTCC | + |
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Preference number: 2 (lower is better) Translates to: GCPILTPIGPPRATYSPGSMHHH*GVVRVS Trigger: GGACACCCTCACCACCCCGCAGTGATGATGCATGGA...GCCAGGGGAGTATGTAGCCCGGGGTGGCCCAATGGGTGTGAGTATGGGACAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
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| 3UTR-3UTR CCA 90 bp | GGCTTGGGTATAACTCGGCTGTCCCATACTCACACCCATTGGGCCACCCCGGGCATTGGCATTCCAGGGTaGGGCTGTCCTCCATGCATC | + |
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Preference number: 2 (lower is better) Translates to: GLGITRLSHTHTHWATPGIGIPG*GCPPCI Trigger: GATGCATGGAGGACAGCCCCACCCTGGAATGCCAAT...GCCCGGGGTGGCCCAATGGGTGTGAGTATGGGACAGCCGAGTTATACCCAAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
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| 3UTR-3UTR CCA 90 bp | TCGGCTGTCCCATACTCACACCCATTGGGCCACCCCGGGCTACATACTCCCCTGCATACTTTGCAGCCCTaGCGCTCTGATGCCCATGTG | + |
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Preference number: 2 (lower is better) Translates to: SAVPYSHPLGHPGLHTPLHTLQP*RSDAHV Trigger: CACATGGGCATCAGAGCGCCAGGGCTGCAAAGTATG...CAGGGGAGTATGTAGCCCGGGGTGGCCCAATGGGTGTGAGTATGGGACAGCCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102878.11 ENSMUST00000177357.4 |
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| 3UTR-3UTR CCA 90 bp | GGTGGGGCTGTCCTCCATGCATCATCACTGCGGGGTGGTGAGGGTGTCCAGGAAGGCTACATACTCCCCTaGCATACTTTGCAGCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: GGAVLHASSLRGGEGVQEGYILP*HTLQPW Trigger: CCAGGGCTGCAAAGTATGCCAGGGGAGTATGTAGCC...TTCCTGGACACCCTCACCACCCCGCAGTGATGATGCATGGAGGACAGCCCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102878.11 ENSMUST00000177357.4 |
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| 3UTR-3UTR TCA 90 bp | TCCATGCATCATCACTGCGGGGTGGTGAGGGTGTCCAGGAATGTACGTATGCATGCAGCCCTGGCGCTCTaGTGCCCATGTGCTGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: SMHHHCGVVRVSRNVRMHAALAL*CPCAAD Trigger: GTCAGCAGCACATGGGCATCAGAGCGCCAGGGCTGC...ATGCATACGTACATTCCTGGACACCCTCACCACCCCGCAGTGATGATGCATGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102878.11 ENSMUST00000177357.4 |
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| 3UTR-3UTR TCA 90 bp | GGCTGTCCCATACTCACACCCATTGGGCCACCCCGGGCTACATACTCCCCTGGCCAGGTTCTAGGTGGCTaGGAGGCAGTAAGATATTGC | + |
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Preference number: 2 (lower is better) Translates to: GCPILTPIGPPRATYSPGQVLGG*EAVRYC Trigger: GCAATATCTTACTGCCTCTCAGCCACCTAGAACCTG...GCCAGGGGAGTATGTAGCCCGGGGTGGCCCAATGGGTGTGAGTATGGGACAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
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| 3UTR-3UTR CCA 90 bp | AACTCGGCTGTCCCATACTCACACCCATTGGGCCACCCCGGGCTACATACTCCCGAATGTACGTATGCATaGGGGGCCCATGACGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: NSAVPYSHPLGHPGLHTPECTYA*GAHDAA Trigger: AGCTGCGTCATGGGCCCCCCATGCATACGTACATTC...GGGAGTATGTAGCCCGGGGTGGCCCAATGGGTGTGAGTATGGGACAGCCGAGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
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| 3UTR-3UTR TCA 90 bp | ATGTCCATGACTTGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGGGCAGCCCTGGCGCTCTaGTGCCCATGTGCTGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: MSMTCALIVGSPVLRTEGAALAL*CPCAAD Trigger: GTCAGCAGCACATGGGCATCAGAGCGCCAGGGCTGC...CCCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACAAGTCATGGACAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102878.11 ENSMUST00000177357.4 |
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| 3UTR-3UTR TCA 90 bp | GGCTTGGGTATAACTCGGCTGTCCCATACTCACACCCATTGGGCCACCCCGGGCCAGGTTCTAGGTGGCTaGGAGGCAGTAAGATATTGC | + |
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Preference number: 2 (lower is better) Translates to: GLGITRLSHTHTHWATPGQVLGG*EAVRYC Trigger: GCAATATCTTACTGCCTCTCAGCCACCTAGAACCTG...GCCCGGGGTGGCCCAATGGGTGTGAGTATGGGACAGCCGAGTTATACCCAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
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| 3UTR-3UTR GCA 90 bp | GGCTTGGGTATAACTCGGCTGTCCCATACTCACACCCATTGGGCCACCCCGGGCGCTCTTTCCTCTCCTTaGACTGCTGCAGACTGCTTA | + |
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Preference number: 2 (lower is better) Translates to: GLGITRLSHTHTHWATPGALSSP*TAADCL Trigger: TAAGCAGTCTGCAGCAGTGCAAGGAGAGGAAAGAGC...GCCCGGGGTGGCCCAATGGGTGTGAGTATGGGACAGCCGAGTTATACCCAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
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| 3UTR-3UTR GCA 90 bp | GGTGGGGCTGTCCTCCATGCATCATCACTGCGGGGTGGTGAGGGTGTCCAGGAAGACCTTCCTGTCCCTTaGAGGATAACTGTAAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: GGAVLHASSLRGGEGVQEDLPVP*RITVRL Trigger: AAGCCTTACAGTTATCCTGCAAGGGACAGGAAGGTC...TTCCTGGACACCCTCACCACCCCGCAGTGATGATGCATGGAGGACAGCCCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
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| 3UTR-3UTR GCA 90 bp | TCGGCTGTCCCATACTCACACCCATTGGGCCACCCCGGGCTACATACTCCCCTGTGCAAATCAGTCTGTTaGTATGACAACCCACTCCCC | + |
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Preference number: 2 (lower is better) Translates to: SAVPYSHPLGHPGLHTPLCKSVC*YDNPLP Trigger: GGGGAGTGGGTTGTCATAGCAACAGACTGATTTGCA...CAGGGGAGTATGTAGCCCGGGGTGGCCCAATGGGTGTGAGTATGGGACAGCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
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| 3UTR-3UTR CCA 90 bp | GGCTGTCCCATACTCACACCCATTGGGCCACCCCGGGCTACATACTCCCCTGGCACTAGGGATGCTCCTTaGTCCAAAGTAGATGTCAAG | + |
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Preference number: 2 (lower is better) Translates to: GCPILTPIGPPRATYSPGTRDAP*SKVDVK Trigger: CTTGACATCTACTTTGGACCAAGGAGCATCCCTAGT...GCCAGGGGAGTATGTAGCCCGGGGTGGCCCAATGGGTGTGAGTATGGGACAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
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| 3UTR-3UTR CCA 90 bp | GGCTTGGGTATAACTCGGCTGTCCCATACTCACACCCATTGGGCCACCCCGGGCGGGAGGTTTGTCTGCTaGTTCCATCATGGGCATTTT | + |
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Preference number: 2 (lower is better) Translates to: GLGITRLSHTHTHWATPGGRFVC*FHHGHF Trigger: AAAATGCCCATGATGGAACCAGCAGACAAACCTCCC...GCCCGGGGTGGCCCAATGGGTGTGAGTATGGGACAGCCGAGTTATACCCAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
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| 3UTR CAA 90 bp | ACAGGCAGCAGCCCTCCTGGTGAATGGCTTGAGGATGCTTTTCGCTaGCCTGACTTGAATACAGTCACTAGAGGGGACTTGCCTGCTCGG | + |
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Preference number: 2 (lower is better) Translates to: TGSSPPGEWLEDAFR*PDLNTVTRGDLPAR Trigger: CCGAGCAGGCAAGTCCCCTCTAGTGACTGTATTCAAGTCAGGCAAGCGAAAAGCATCCTCAAGCCATTCACCAGGAGGGCTGCTGCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177357.4 |
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| 3UTR-3UTR TCA 90 bp | CTGAGCGTGAATGTCCATGACTTGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAAGGTGTCCCTTGGCTaGCAGGCAGCAGCCCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: LSVNVHDLCTHCRVSCVKKVSLG*QAAALL Trigger: CAGGAGGGCTGCTGCCTGTCAGCCAAGGGACACCTT...CTTAACACAGGAGACCCGACAATGAGTGCACAAGTCATGGACATTCACGCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177357.4 |
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| 3UTR-3UTR GCA 90 bp | GGCTGTCCCATACTCACACCCATTGGGCCACCCCGGGCTACATACTCCCCTGGCTTCGGATGGTTCTCCTaGATTTTAAGAGTCCCTATG | + |
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Preference number: 2 (lower is better) Translates to: GCPILTPIGPPRATYSPGFGWFS*ILRVPM Trigger: CATAGGGACTCTTAAAATGCAGGAGAACCATCCGAA...GCCAGGGGAGTATGTAGCCCGGGGTGGCCCAATGGGTGTGAGTATGGGACAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
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| 3UTR-3UTR GCA 90 bp | CATGCATCATCACTGCGGGGTGGTGAGGGTGTCCAGGAATGTACGTATGCATGGTCACTAGAGGGGACTTaGCTGCTCGGTTGGACTGGT | + |
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Preference number: 2 (lower is better) Translates to: HASSLRGGEGVQECTYAWSLEGT*LLGWTG Trigger: ACCAGTCCAACCGAGCAGGCAAGTCCCCTCTAGTGA...CCATGCATACGTACATTCCTGGACACCCTCACCACCCCGCAGTGATGATGCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177357.4 |
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| 3UTR-3UTR CCA 90 bp | CATGCATCATCACTGCGGGGTGGTGAGGGTGTCCAGGAATGTACGTATGCATGGCATACTCACACCCATTaGGCCACCCCGGGCTACATA | + |
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Preference number: 2 (lower is better) Translates to: HASSLRGGEGVQECTYAWHTHTH*ATPGYI Trigger: TATGTAGCCCGGGGTGGCCCAATGGGTGTGAGTATG...CCATGCATACGTACATTCCTGGACACCCTCACCACCCCGCAGTGATGATGCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCTTTGGGTTTCCATGCCTCCTCCTACCAGTCTCCTTAAGACACTGCCTGCAGAATGTACGTATGCATaGGGGGCCCATGACGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: GLWVSMPPPTSLLKTLPAECTYA*GAHDAA Trigger: AGCTGCGTCATGGGCCCCCCATGCATACGTACATTC...TGCAGGCAGTGTCTTAAGGAGACTGGTAGGAGGAGGCATGGAAACCCAAAGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
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| 3UTR-3UTR TCA 90 bp | GTTAGGCTTCTAAACACACACGGCCTTTGGGTTTCCATGCCTCCTCCTACCAGTATCACTGCGGGGTGGTaGGGGTGTCCAGGAATGTAC | + |
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Preference number: 2 (lower is better) Translates to: VRLLNTHGLWVSMPPPTSITAGW*GCPGMY Trigger: GTACATTCCTGGACACCCTCACCACCCCGCAGTGAT...ACTGGTAGGAGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAGCCTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
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| 3UTR-3UTR GCA 90 bp | GGTGGGGCTGTCCTCCATGCATCATCACTGCGGGGTGGTGAGGGTGTCCAGGAATTCGGATGGTTCTCCTaGATTTTAAGAGTCCCTATG | + |
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Preference number: 2 (lower is better) Translates to: GGAVLHASSLRGGEGVQEFGWFS*ILRVPM Trigger: CATAGGGACTCTTAAAATGCAGGAGAACCATCCGAA...TTCCTGGACACCCTCACCACCCCGCAGTGATGATGCATGGAGGACAGCCCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
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| 3UTR-3UTR GCA 90 bp | ACACACGGCCTTTGGGTTTCCATGCCTCCTCCTACCAGTCTCCTTAAGACACTGGCCACTGCCCCTCCATaGCCATATTCATGCCCATTC | + |
|
Preference number: 2 (lower is better) Translates to: THGLWVSMPPPTSLLKTLATAPP*PYSCPF Trigger: GAATGGGCATGAATATGGGCATGGAGGGGCAGTGGC...CAGTGTCTTAAGGAGACTGGTAGGAGGAGGCATGGAAACCCAAAGGCCGTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCTTGGGTATAACTCGGCTGTCCCATACTCACACCCATTGGGCCACCCCGGGCTGCACTGCTGCAGACTaGTTACATTTTGCAAATCAG | + |
|
Preference number: 2 (lower is better) Translates to: GLGITRLSHTHTHWATPGCTAAD*LHFANQ Trigger: CTGATTTGCAAAATGTAAGCAGTCTGCAGCAGTGCA...GCCCGGGGTGGCCCAATGGGTGTGAGTATGGGACAGCCGAGTTATACCCAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCCTTTGGGTTTCCATGCCTCCTCCTACCAGTCTCCTTAAGACACTGCCTGCAGGCTACATACTCCCCTaGCATACTTTGCAGCCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: GLWVSMPPPTSLLKTLPAGYILP*HTLQPS Trigger: GGAAGGCTGCAAAGTATGCCAGGGGAGTATGTAGCC...TGCAGGCAGTGTCTTAAGGAGACTGGTAGGAGGAGGCATGGAAACCCAAAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068264.14 |
||
| 3UTR-3UTR CCA 90 bp | ACTTGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGGCTTGAGGCTGGCTACATACTCCCCTaGCATACTTTGCAGCCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: TCALIVGSPVLRTEGLEAGYILP*HTLQPW Trigger: CCAGGGCTGCAAAGTATGCCAGGGGAGTATGTAGCC...AGCCTCAAGCCCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102878.11 ENSMUST00000177357.4 |
||
| 3UTR-3UTR TCA 90 bp | TTGCATGTCCCCCGAGTTGACTTCGGATGGTTCTCCTGCATTTTAAGAGTCCCTATCACTGCGGGGTGGTaGGGGTGTCCAGGAATGTAC | + |
|
Preference number: 2 (lower is better) Translates to: LHVPRVDFGWFSCILRVPITAGW*GCPGMY Trigger: GTACATTCCTGGACACCCTCACCACCCCGCAGTGAT...AGGGACTCTTAAAATGCAGGAGAACCATCCGAAGTCAACTCGGGGGACATGCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGGCAGCTGGAGAAAGCAGAGGGTGGACTTCTTTACCTGCCCTGACAGGGACTAAGGTGTCCCTTGGCTaGCTACAAAAGTACACAGCA | + |
|
Preference number: 2 (lower is better) Translates to: QAAGESRGWTSLPALTGTKVSLG*LQKYTA Trigger: TGCTGTGTACTTTTGTAGTCAGCCAAGGGACACCTT...AGTCCCTGTCAGGGCAGGTAAAGAAGTCCACCCTCTGCTTTCTCCAGCTGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
||
| 3UTR-3UTR GCA 90 bp | GTGACAGTTAGGCTTCTAAACACACACGGCCTTTGGGTTTCCATGCCTCCTCCTTCCCCTGGCATACTTTaGAGCCTTCCCCCTGGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: VTVRLLNTHGLWVSMPPPSPGIL*SLPPGF Trigger: AAAGCCAGGGGGAAGGCTGCAAAGTATGCCAGGGGA...AGGAGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAGCCTAACTGTCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068264.14 |
||
| 3UTR-3UTR GCA 90 bp | TGGGTTTCCATGCCTCCTCCTACCAGTCTCCTTAAGACACTGCCTGCAACAGCTATGGGCCCAGTGTGGTaGCAACAGAGCTTTGATGGA | + |
|
Preference number: 2 (lower is better) Translates to: WVSMPPPTSLLKTLPATAMGPVW*QQSFDG Trigger: TCCATCAAAGCTCTGTTGGCACCACACTGGGCCCAT...AGCTGTTGCAGGCAGTGTCTTAAGGAGACTGGTAGGAGGAGGCATGGAAACCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGTCCATGACTTGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGGGTGGACTTCTTTACCTaGCCTGACAGGGACTTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: MSMTCALIVGSPVLRTEGVDFFT*PDRDLG Trigger: CCCCAAGTCCCTGTCAGGGCAGGTAAAGAAGTCCAC...CCCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACAAGTCATGGACAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCATGACTTGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGGCTTGAATGTACGTATGCATaGGGGGCCCATGACGCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: SMTCALIVGSPVLRTEGLECTYA*GAHDAA Trigger: AGCTGCGTCATGGGCCCCCCATGCATACGTACATTC...AAGCCCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACAAGTCATGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| 3UTR-3UTR TCA 90 bp | GGCCTTTGGGTTTCCATGCCTCCTCCTACCAGTCTCCTTAAGACACTGCCTGCAGTCTTTGAACTTTACTaGGTCCCACAAGTGATCCCG | + |
|
Preference number: 2 (lower is better) Translates to: GLWVSMPPPTSLLKTLPAVFELY*VPQVIP Trigger: CGGGATCACTTGTGGGACTCAGTAAAGTTCAAAGAC...TGCAGGCAGTGTCTTAAGGAGACTGGTAGGAGGAGGCATGGAAACCCAAAGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
||
| 3UTR-3UTR GCA 90 bp | GTCCATTACAAAACCTCCCATTGGCTGTCCATCAGGGTTATAAGGTGTCCCTTGTCCCCTGGCATACTTTaGAGCCCTGGCGCTCTGATG | + |
|
Preference number: 2 (lower is better) Translates to: VHYKTSHWLSIRVIRCPLSPGIL*SPGALM Trigger: CATCAGAGCGCCAGGGCTGCAAAGTATGCCAGGGGA...CAAGGGACACCTTATAACCCTGATGGACAGCCAATGGGAGGTTTTGTAATGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177357.4 |
||
| 3UTR-3UTR CCA 90 bp | GATGTGACAGTTAGGCTTCTAAACACACACGGCCTTTGGGTTTCCATGCCTCCTCATACTCACACCCATTaGGCCACCCCGGGCTACATA | + |
|
Preference number: 2 (lower is better) Translates to: DVTVRLLNTHGLWVSMPPHTHTH*ATPGYI Trigger: TATGTAGCCCGGGGTGGCCCAATGGGTGTGAGTATG...AGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAGCCTAACTGTCACATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGCATGTCCCCCGAGTTGACTTCGGATGGTTCTCCTGCATTTTAAGAGTCCCTATTGGCATTCCAGGGTaGGGCTGTCCTCCATGCATC | + |
|
Preference number: 2 (lower is better) Translates to: LHVPRVDFGWFSCILRVPIGIPG*GCPPCI Trigger: GATGCATGGAGGACAGCCCCACCCTGGAATGCCAAT...AGGGACTCTTAAAATGCAGGAGAACCATCCGAAGTCAACTCGGGGGACATGCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
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| 3UTR-3UTR TCA 90 bp | GAATGGAACTCCATAGTCCTTGCAGGAAAAGACCTGATTCGAGATCAGTCACCAATCACTGCGGGGTGGTaGGGGTGTCCAGGAATGTAC | + |
|
Preference number: 2 (lower is better) Translates to: EWNSIVLAGKDLIRDQSPITAGW*GCPGMY Trigger: GTACATTCCTGGACACCCTCACCACCCCGCAGTGAT...TGGTGACTGATCTCGAATCAGGTCTTTTCCTGCAAGGACTATGGAGTTCCATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| 3UTR-3UTR TCA 90 bp | ATGTCCATGACTTGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGGATGCCCATGTGCTGCTaGCCGTCCATTACAAAACCT | + |
|
Preference number: 2 (lower is better) Translates to: MSMTCALIVGSPVLRTEGMPMCC*PSITKP Trigger: AGGTTTTGTAATGGACGGTCAGCAGCACATGGGCAT...CCCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACAAGTCATGGACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 |
||
| 3UTR-3UTR GCA 90 bp | TCGAGATCAGTCACCATTGTAGACAACGCATATTCCCTTAAGCTACTGAGCGTGTCCATGCATCATCACTaGGGGGTGGTGAGGGTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: SRSVTIVDNAYSLKLLSVSMHHH*GVVRVS Trigger: GGACACCCTCACCACCCCGCAGTGATGATGCATGGA...CACGCTCAGTAGCTTAAGGGAATATGCGTTGTCTACAATGGTGACTGATCTCGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| 3UTR-3UTR GCA 90 bp | TCGAGATCAGTCACCATTGTAGACAACGCATATTCCCTTAAGCTACTGAGCGTGTCCCCTGGCATACTTTaGAGCCCTGGCGCTCTGATG | + |
|
Preference number: 2 (lower is better) Translates to: SRSVTIVDNAYSLKLLSVSPGIL*SPGALM Trigger: CATCAGAGCGCCAGGGCTGCAAAGTATGCCAGGGGA...CACGCTCAGTAGCTTAAGGGAATATGCGTTGTCTACAATGGTGACTGATCTCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102878.11 ENSMUST00000177357.4 |
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| 3UTR-3UTR GCA 90 bp | ACACACGGCCTTTGGGTTTCCATGCCTCCTCCTACCAGTCTCCTTAAGACACTGTGCAAATCAGTCTGTTaGTATGACAACCCACTCCCC | + |
|
Preference number: 2 (lower is better) Translates to: THGLWVSMPPPTSLLKTLCKSVC*YDNPLP Trigger: GGGGAGTGGGTTGTCATAGCAACAGACTGATTTGCA...CAGTGTCTTAAGGAGACTGGTAGGAGGAGGCATGGAAACCCAAAGGCCGTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
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| 3UTR-3UTR CCA 90 bp | TCCATGACTTGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGGCTTATAGTGGCAGAAAGCTaGGTAGGCAAACTTGGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: SMTCALIVGSPVLRTEGLIVAES*VGKLGG Trigger: TCCCCCAAGTTTGCCTACCCAGCTTTCTGCCACTAT...AAGCCCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACAAGTCATGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
||
| 3UTR CAA 90 bp | GACAACGCATATTCCCTTAAGCTACTGAGCGTGAATGTCCATGACTaGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: DNAYSLKLLSVNVHD*CTHCRVSCVKNRGA Trigger: AGCCCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACAAGTCATGGACATTCACGCTCAGTAGCTTAAGGGAATATGCGTTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTCCATCATCATCAAGGGTGAAAGGCAGAACGCCATTGCTAAGTATGTTCAATATCACTGCGGGGTGGTaGGGGTGTCCAGGAATGTAC | + |
|
Preference number: 2 (lower is better) Translates to: APSSSRVKGRTPLLSMFNITAGW*GCPGMY Trigger: GTACATTCCTGGACACCCTCACCACCCCGCAGTGAT...ATTGAACATACTTAGCAATGGCGTTCTGCCTTTCACCCTTGATGATGATGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
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| 3UTR-3UTR TCA 90 bp | ACACACGGCCTTTGGGTTTCCATGCCTCCTCCTACCAGTCTCCTTAAGACACTGACTGCCTGCAACAGCTaGTTAATCATTGTTGGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: THGLWVSMPPPTSLLKTLTACNS*LIIVGD Trigger: GTCACCAACAATGATTAATCAGCTGTTGCAGGCAGT...CAGTGTCTTAAGGAGACTGGTAGGAGGAGGCATGGAAACCCAAAGGCCGTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| 3UTR-3UTR TCA 90 bp | CCCCACTCAGTTAACCTTATATGCATGCCACCTTGCACTAATCTGCTACTTTCACTTCTTTACCTGCCCTaGCAGGGACTTGGGGAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: PHSVNLICMPPCTNLLLSLLYLP*QGLGEG Trigger: ACCCTCCCCAAGTCCCTGTCAGGGCAGGTAAAGAAG...TGAAAGTAGCAGATTAGTGCAAGGTGGCATGCATATAAGGTTAACTGAGTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
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| 3UTR-3UTR GCA 90 bp | ATCTGGGACAGTTTTCCTAGGCTCACTGCACTAGGCCTGCCACTGAAGATTGCAGACCTTCCTGTCCCTTaGAGGATAACTGTAAGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: IWDSFPRLTALGLPLKIADLPVP*RITVRL Trigger: AAGCCTTACAGTTATCCTGCAAGGGACAGGAAGGTC...TGCAATCTTCAGTGGCAGGCCTAGTGCAGTGAGCCTAGGAAAACTGTCCCAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
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| 3UTR-3UTR GCA 90 bp | AGCGTACCCCACTCAGTTAACCTTATATGCATGCCACCTTGCACTAATCTGCTAGCCTTTGGGTTTCCATaGCTCCTCCTACCAGTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: SVPHSVNLICMPPCTNLLAFGFP*LLLPVS Trigger: GGAGACTGGTAGGAGGAGGCATGGAAACCCAAAGGC...TAGCAGATTAGTGCAAGGTGGCATGCATATAAGGTTAACTGAGTGGGGTACGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000185131.8 |
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| 3UTR-3UTR CCA 90 bp | TCGAGATCAGTCACCATTGTAGACAACGCATATTCCCTTAAGCTACTGAGCGTGCATACTCACACCCATTaGGCCACCCCGGGCTACATA | + |
|
Preference number: 2 (lower is better) Translates to: SRSVTIVDNAYSLKLLSVHTHTH*ATPGYI Trigger: TATGTAGCCCGGGGTGGCCCAATGGGTGTGAGTATG...CACGCTCAGTAGCTTAAGGGAATATGCGTTGTCTACAATGGTGACTGATCTCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
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| 3UTR-3UTR CCA 90 bp | TGGAACTCCATAGTCCTTGCAGGAAAAGACCTGATTCGAGATCAGTCACCATTGGAATGTACGTATGCATaGGGGGCCCATGACGCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: WNSIVLAGKDLIRDQSPLECTYA*GAHDAA Trigger: AGCTGCGTCATGGGCCCCCCATGCATACGTACATTC...CAATGGTGACTGATCTCGAATCAGGTCTTTTCCTGCAAGGACTATGGAGTTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
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| 3UTR CAA 90 bp | TGGAGAAAGCAGAGGGTGGACTTCTTTACCTGCCCTGACAGGGACTaGGGGAGGGTAACACTTCTGGAGTTAAACGTGAAAAAGTACCAT | + |
|
Preference number: 2 (lower is better) Translates to: WRKQRVDFFTCPDRD*GRVTLLELNVKKYH Trigger: ATGGTACTTTTTCACGTTTAACTCCAGAAGTGTTACCCTCCCCAAGTCCCTGTCAGGGCAGGTAAAGAAGTCCACCCTCTGCTTTCTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGGCAGCTGGAGAAAGCAGAGGGTGGACTTCTTTACCTGCCCTGACAGGGACTAAAGCTCTACCTCACTaGATGTCTTTGAACTTTACT | + |
|
Preference number: 2 (lower is better) Translates to: QAAGESRGWTSLPALTGTKALPH*MSLNFT Trigger: AGTAAAGTTCAAAGACATTCAGTGAGGTAGAGCTTT...AGTCCCTGTCAGGGCAGGTAAAGAAGTCCACCCTCTGCTTTCTCCAGCTGCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGAGAGAGAGCGCACGCACATGGCTGAAATCCTAGGCAAGAAGAAAGATTCTATACTCCTCTTGCTTTaGGGGGCCTCTTGTCTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: RERERTHMAEILGKKKDSILLLL*GASCLL Trigger: CAGAAGACAAGAGGCCCCTCAAAGCAAGAGGAGTAT...AGAATCTTTCTTCTTGCCTAGGATTTCAGCCATGTGCGTGCGCTCTCTCTCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
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| 3UTR-3UTR GCA 90 bp | AGATCAGTCACCATTGTAGACAACGCATATTCCCTTAAGCTACTGAGCGTGAATTCCATGCATCATCACTaGGGGGTGGTGAGGGTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: RSVTIVDNAYSLKLLSVNSMHHH*GVVRVS Trigger: GGACACCCTCACCACCCCGCAGTGATGATGCATGGA...ATTCACGCTCAGTAGCTTAAGGGAATATGCGTTGTCTACAATGGTGACTGATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGTGTGGTGCCAACAGAGCTTTGATGGAGCTGAGAGCAGAGTGGTATTTCAGGAACTCCATAGTCCTTaGAGGAAAAGACCTGATTCG | + |
|
Preference number: 2 (lower is better) Translates to: PVWCQQSFDGAESRVVFQELHSP*RKRPDS Trigger: CGAATCAGGTCTTTTCCTGCAAGGACTATGGAGTTC...CTGAAATACCACTCTGCTCTCAGCTCCATCAAAGCTCTGTTGGCACCACACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
||
| 3UTR-3UTR GCA 90 bp | GTTAGGCTTCTAAACACACACGGCCTTTGGGTTTCCATGCCTCCTCCTACCAGTGAACTCCATAGTCCTTaGAGGAAAAGACCTGATTCG | + |
|
Preference number: 2 (lower is better) Translates to: VRLLNTHGLWVSMPPPTSELHSP*RKRPDS Trigger: CGAATCAGGTCTTTTCCTGCAAGGACTATGGAGTTC...ACTGGTAGGAGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAGCCTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGGTTTCCATGCCTCCTCCTACCAGTCTCCTTAAGACACTGCCTGCAACAGCTGTCTCCTTAAGACACTaGCTGCAACAGCTGATTAAT | + |
|
Preference number: 2 (lower is better) Translates to: WVSMPPPTSLLKTLPATAVSLRH*LQQLIN Trigger: ATTAATCAGCTGTTGCAGGCAGTGTCTTAAGGAGAC...AGCTGTTGCAGGCAGTGTCTTAAGGAGACTGGTAGGAGGAGGCATGGAAACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| 3UTR-3UTR GCA 90 bp | CCCCACTCAGTTAACCTTATATGCATGCCACCTTGCACTAATCTGCTACTTTCAGCCTTTGGGTTTCCATaGCTCCTCCTACCAGTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: PHSVNLICMPPCTNLLLSAFGFP*LLLPVS Trigger: GGAGACTGGTAGGAGGAGGCATGGAAACCCAAAGGC...TGAAAGTAGCAGATTAGTGCAAGGTGGCATGCATATAAGGTTAACTGAGTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000185131.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTCTAAACACACACGGCCTTTGGGTTTCCATGCCTCCTCCTACCAGTCTCCTTGAGGCAGTAAGATATTaGACACATAAAGGTCCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: LLNTHGLWVSMPPPTSLLEAVRY*THKGPG Trigger: GCCAGGACCTTTATGTGTGCAATATCTTACTGCCTC...AAGGAGACTGGTAGGAGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| 3UTR-3UTR CCA 90 bp | GATTCGAGATCAGTCACCATTGTAGACAACGCATATTCCCTTAAGCTACTGAGCCATACTCACACCCATTaGGCCACCCCGGGCTACATA | + |
|
Preference number: 2 (lower is better) Translates to: DSRSVTIVDNAYSLKLLSHTHTH*ATPGYI Trigger: TATGTAGCCCGGGGTGGCCCAATGGGTGTGAGTATG...GCTCAGTAGCTTAAGGGAATATGCGTTGTCTACAATGGTGACTGATCTCGAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| 3UTR-3UTR CCA 90 bp | TCGAGATCAGTCACCATTGTAGACAACGCATATTCCCTTAAGCTACTGAGCGTGAGCCCTCCTGGTGAATaGCTTGAGGATGCTTTTCGC | + |
|
Preference number: 2 (lower is better) Translates to: SRSVTIVDNAYSLKLLSVSPPGE*LEDAFR Trigger: GCGAAAAGCATCCTCAAGCCATTCACCAGGAGGGCT...CACGCTCAGTAGCTTAAGGGAATATGCGTTGTCTACAATGGTGACTGATCTCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177357.4 |
||
| 3UTR-3UTR TCA 90 bp | AGCGTACCCCACTCAGTTAACCTTATATGCATGCCACCTTGCACTAATCTGCTATCCTGGCTTCCCCTTTaGGGTCTTAGATGCACAGAT | + |
|
Preference number: 2 (lower is better) Translates to: SVPHSVNLICMPPCTNLLSWLPL*GLRCTD Trigger: ATCTGTGCATCTAAGACCTCAAAGGGGAAGCCAGGA...TAGCAGATTAGTGCAAGGTGGCATGCATATAAGGTTAACTGAGTGGGGTACGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAAATTCAAGCCCCAGGCTAGAAAGAGGGAGAGGGAGGAGAAGAGAGAGAGAGAAGAAAAGAAGACACTaGAACCTGACTAACTGGGTA | + |
|
Preference number: 2 (lower is better) Translates to: ANSSPRLERGRGRRREREKKRRH*NLTNWV Trigger: TACCCAGTTAGTCAGGTTCCAGTGTCTTCTTTTCTT...CTCTCTCTCTCTTCTCCTCCCTCTCCCTCTTTCTAGCCTGGGGCTTGAATTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAGAGAGAGAGCGCACGCACATGGCTGAAATCCTAGGCAAGAAGAAAGATTCTACCACAGGTTCTAGGTaGCTGAGAGGCAGTAAGATA | + |
|
Preference number: 2 (lower is better) Translates to: RERERTHMAEILGKKKDSTTGSR*LRGSKI Trigger: TATCTTACTGCCTCTCAGCCACCTAGAACCTGTGGT...AGAATCTTTCTTCTTGCCTAGGATTTCAGCCATGTGCGTGCGCTCTCTCTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| 3UTR CAA 90 bp | AATGTAACTCATGCATCAACTGCGGTTAGACAGATTTATGGCACTTaGGGGACATGCTCTTTCCTCTCCTTGCACTGCTGCAGACTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: NVTHASTAVRQIYGT*GTCSFLSLHCCRLL Trigger: AAGCAGTCTGCAGCAGTGCAAGGAGAGGAAAGAGCATGTCCCCAAAGTGCCATAAATCTGTCTAACCGCAGTTGATGCATGAGTTACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| 3UTR-3UTR TCA 90 bp | CCCCACTCAGTTAACCTTATATGCATGCCACCTTGCACTAATCTGCTACTTTCAATGCCCATGTGCTGCTaGCCGTCCATTACAAAACCT | + |
|
Preference number: 2 (lower is better) Translates to: PHSVNLICMPPCTNLLLSMPMCC*PSITKP Trigger: AGGTTTTGTAATGGACGGTCAGCAGCACATGGGCAT...TGAAAGTAGCAGATTAGTGCAAGGTGGCATGCATATAAGGTTAACTGAGTGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102878.11 ENSMUST00000144988.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTCTAAACACACACGGCCTTTGGGTTTCCATGCCTCCTCCTACCAGTCTCCTTGGACACAGTGTGCCATaGCTGTTATTAATAATTAGC | + |
|
Preference number: 2 (lower is better) Translates to: LLNTHGLWVSMPPPTSLLGHSVP*LLLIIS Trigger: GCTAATTATTAATAACAGTCATGGCACACTGTGTCC...AAGGAGACTGGTAGGAGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000185131.8 |
||
| 3UTR-3UTR TCA 90 bp | ACAGTTAGGCTTCTAAACACACACGGCCTTTGGGTTTCCATGCCTCCTCCTACCACCCCTTTGCCCTTTTaGCAGGTAATAAAGTTTACA | + |
|
Preference number: 2 (lower is better) Translates to: TVRLLNTHGLWVSMPPPTTPLPF*QVIKFT Trigger: TGTAAACTTTATTACCTGTCAAAAGGGCAAAGGGGT...GGTAGGAGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAGCCTAACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGAGAGGACGCAGAAGGAGAATGTTCCTAGGACAAAGTGAAGACAAAGGCCCCTTCGGATGGTTCTCCTaGATTTTAAGAGTCCCTATG | + |
|
Preference number: 2 (lower is better) Translates to: MRGRRRRMFLGQSEDKGPFGWFS*ILRVPM Trigger: CATAGGGACTCTTAAAATGCAGGAGAACCATCCGAA...GGGGCCTTTGTCTTCACTTTGTCCTAGGAACATTCTCCTTCTGCGTCCTCTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| 3UTR-3UTR GCA 90 bp | TATTTCAGAGGCAGGGTTCAACCCTGCAGCATCACCCCAGGTATAATTTGGTCGGTTTCAGAAGTGAGCTaGCTTGGGTTATTAAAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: YFRGRVQPCSITPGIIWSVSEVS*LGLLKH Trigger: GTGCTTTAATAACCCAAGGCAGCTCACTTCTGAAAC...CGACCAAATTATACCTGGGGTGATGCTGCAGGGTTGAACCCTGCCTCTGAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
||
| 3UTR-3UTR CCA 90 bp | CAATGTCTACATAAATGCTCCAAGGTGGGACTATGGAAAAATACACACATGACCATTGGCATTCCAGGGTaGGGCTGTCCTCCATGCATC | + |
|
Preference number: 2 (lower is better) Translates to: QCLHKCSKVGLWKNTHMTIGIPG*GCPPCI Trigger: GATGCATGGAGGACAGCCCCACCCTGGAATGCCAAT...GGTCATGTGTGTATTTTTCCATAGTCCCACCTTGGAGCATTTATGTAGACATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAGAGAGAGAGCGCACGCACATGGCTGAAATCCTAGGCAAGAAGAAAGATTCTACTAGGGATGCTCCTTaGTCCAAAGTAGATGTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: RERERTHMAEILGKKKDSTRDAP*SKVDVK Trigger: CTTGACATCTACTTTGGACCAAGGAGCATCCCTAGT...AGAATCTTTCTTCTTGCCTAGGATTTCAGCCATGTGCGTGCGCTCTCTCTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| 3UTR CAA 90 bp | TACAAAACCTCCCATTGGCTGTCCATCAGGGTTATAAGGTGTCCCTaGGCTGACTACAAAAGTACACAGCACAACTTCTTAATAACGGGG | + |
|
Preference number: 2 (lower is better) Translates to: YKTSHWLSIRVIRCP*ADYKSTQHNFLITG Trigger: CCCCGTTATTAAGAAGTTGTGCTGTGTACTTTTGTAGTCAGCCAAGGGACACCTTATAACCCTGATGGACAGCCAATGGGAGGTTTTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
||
| 3UTR-3UTR TCA 90 bp | GTCTTATATAGTTATTTTTGCATGTCCCCCGAGTTGACTTCGGATGGTTCTCCTTTCGCTTGCCTGACTTaGATACAGTCACTAGAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: VLYSYFCMSPELTSDGSPFACLT*IQSLEG Trigger: CCCCTCTAGTGACTGTATTCAAGTCAGGCAAGCGAA...AGGAGAACCATCCGAAGTCAACTCGGGGGACATGCAAAAATAACTATATAAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000177357.4 |
||
| 3UTR-3UTR GCA 90 bp | GAATGGAACTCCATAGTCCTTGCAGGAAAAGACCTGATTCGAGATCAGTCACCAGAACTCCATAGTCCTTaGAGGAAAAGACCTGATTCG | + |
|
Preference number: 2 (lower is better) Translates to: EWNSIVLAGKDLIRDQSPELHSP*RKRPDS Trigger: CGAATCAGGTCTTTTCCTGCAAGGACTATGGAGTTC...TGGTGACTGATCTCGAATCAGGTCTTTTCCTGCAAGGACTATGGAGTTCCATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTCTAAACACACACGGCCTTTGGGTTTCCATGCCTCCTCCTACCAGTCTCCTTTCAGTTAACCTTATATaGATGCCACCTTGCACTAAT | + |
|
Preference number: 2 (lower is better) Translates to: LLNTHGLWVSMPPPTSLLSVNLI*MPPCTN Trigger: ATTAGTGCAAGGTGGCATGCATATAAGGTTAACTGA...AAGGAGACTGGTAGGAGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000185131.8 |
||
| 3UTR CAA 90 bp | GTTCAACCCTGCAGCATCACCCCAGGTATAATTTGGTCGCTGCCTTaGCTACCATGTTATAATACAAAACAAATCCTAGGGCTCATGACT | + |
|
Preference number: 2 (lower is better) Translates to: VQPCSITPGIIWSLP*LPCYNTKQILGLMT Trigger: AGTCATGAGCCCTAGGATTTGTTTTGTATTATAACATGGTAGCAAAGGCAGCGACCAAATTATACCTGGGGTGATGCTGCAGGGTTGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCAAATCAGACCTTCCTGTCCCTTGCAGGATAACTGTAAGGCTTTTTAATGTAGAGCGTGAATGTCCATaGCTTGTGCACTCATTGTCG | + |
|
Preference number: 2 (lower is better) Translates to: CKSDLPVPCRITVRLFNVERECP*LVHSLS Trigger: CGACAATGAGTGCACAAGTCATGGACATTCACGCTC...TACATTAAAAAGCCTTACAGTTATCCTGCAAGGGACAGGAAGGTCTGATTTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| 3UTR-3UTR TCA 90 bp | TCAAGAATGGAACTCCATAGTCCTTGCAGGAAAAGACCTGATTCGAGATCAGTCACTGCCTGCAACAGCTaGTTAATCATTGTTGGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: SRMELHSPCRKRPDSRSVTACNS*LIIVGD Trigger: GTCACCAACAATGATTAATCAGCTGTTGCAGGCAGT...GACTGATCTCGAATCAGGTCTTTTCCTGCAAGGACTATGGAGTTCCATTCTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGTCCATGACTTGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGGTTATATAGTTATTTTTaGATGTCCCCCGAGTTGACT | + |
|
Preference number: 2 (lower is better) Translates to: MSMTCALIVGSPVLRTEGLYSYF*MSPELT Trigger: AGTCAACTCGGGGGACATGCAAAAATAACTATATAA...CCCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACAAGTCATGGACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTCCATCATCATCAAGGGTGAAAGGCAGAACGCCATTGCTAAGTATGTTCAATTTCCTCTCCTTGCACTaGTGCAGACTGCTTACATTT | + |
|
Preference number: 2 (lower is better) Translates to: APSSSRVKGRTPLLSMFNFLSLH*CRLLTF Trigger: AAATGTAAGCAGTCTGCAGCAGTGCAAGGAGAGGAA...ATTGAACATACTTAGCAATGGCGTTCTGCCTTTCACCCTTGATGATGATGGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCACAACAAAAAGTATAATTAGCGTACCCCACTCAGTTAACCTTATATGCATGGAATGTACGTATGCATaGGGGGCCCATGACGCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: STTKSIISVPHSVNLICMECTYA*GAHDAA Trigger: AGCTGCGTCATGGGCCCCCCATGCATACGTACATTC...CATGCATATAAGGTTAACTGAGTGGGGTACGCTAATTATACTTTTTGTTGTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000102878.11 ENSMUST00000144988.8 |
||
| 3UTR-3UTR TCA 90 bp | TCAAGAATGGAACTCCATAGTCCTTGCAGGAAAAGACCTGATTCGAGATCAGTCCACGTAATCCCATTATaGTGGACAGACAAAGGAACA | + |
|
Preference number: 2 (lower is better) Translates to: SRMELHSPCRKRPDSRSVHVIPL*WTDKGT Trigger: TGTTCCTTTGTCTGTCCATCATAATGGGATTACGTG...GACTGATCTCGAATCAGGTCTTTTCCTGCAAGGACTATGGAGTTCCATTCTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTTTTTCCCATCCTTCCCGATTTACATCTGTTCAGGCCAATTCAAATATGGTGAATGTCCATGACTTGTaGACTCATTGTCGGGTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: SFSHPSRFTSVQANSNMVNVHDL*THCRVS Trigger: GGAGACCCGACAATGAGTGCACAAGTCATGGACATT...CACCATATTTGAATTGGCCTGAACAGATGTAAATCGGGAAGGATGGGAAAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| 3UTR-3UTR GCA 90 bp | GTCTTATATAGTTATTTTTGCATGTCCCCCGAGTTGACTTCGGATGGTTCTCCTGAACTCCATAGTCCTTaGAGGAAAAGACCTGATTCG | + |
|
Preference number: 2 (lower is better) Translates to: VLYSYFCMSPELTSDGSPELHSP*RKRPDS Trigger: CGAATCAGGTCTTTTCCTGCAAGGACTATGGAGTTC...AGGAGAACCATCCGAAGTCAACTCGGGGGACATGCAAAAATAACTATATAAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| 3UTR-3UTR GCA 90 bp | TCGAGATCAGTCACCATTGTAGACAACGCATATTCCCTTAAGCTACTGAGCGTGAAGTCCTGTATCTTGTaGCAACTGCTTTTTCTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: SRSVTIVDNAYSLKLLSVKSCIL*QLLFLF Trigger: GAACAGAAAAAGCAGTTGGCACAAGATACAGGACTT...CACGCTCAGTAGCTTAAGGGAATATGCGTTGTCTACAATGGTGACTGATCTCGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177357.4 |
||
| 3UTR-3UTR CCA 90 bp | AAAATCCTGCAAATCAGACCTTCCTGTCCCTTGCAGGATAACTGTAAGGCTTTTACTAGGGATGCTCCTTaGTCCAAAGTAGATGTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: KILQIRPSCPLQDNCKAFTRDAP*SKVDVK Trigger: CTTGACATCTACTTTGGACCAAGGAGCATCCCTAGT...AAAAGCCTTACAGTTATCCTGCAAGGGACAGGAAGGTCTGATTTGCAGGATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCCACTCAGTTAACCTTATATGCATGCCACCTTGCACTAATCTGCTACTTTCATCCAAGGTGGGACTATaGAAAAATACACACATGACC | + |
|
Preference number: 2 (lower is better) Translates to: PHSVNLICMPPCTNLLLSSKVGL*KNTHMT Trigger: GGTCATGTGTGTATTTTTCCATAGTCCCACCTTGGA...TGAAAGTAGCAGATTAGTGCAAGGTGGCATGCATATAAGGTTAACTGAGTGGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000185131.8 |
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| 3UTR-3UTR TCA 90 bp | TCCACAACAAAAAGTATAATTAGCGTACCCCACTCAGTTAACCTTATATGCATGATGCCCATGTGCTGCTaGCCGTCCATTACAAAACCT | + |
|
Preference number: 2 (lower is better) Translates to: STTKSIISVPHSVNLICMMPMCC*PSITKP Trigger: AGGTTTTGTAATGGACGGTCAGCAGCACATGGGCAT...CATGCATATAAGGTTAACTGAGTGGGGTACGCTAATTATACTTTTTGTTGTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000102878.11 ENSMUST00000144988.8 |
||
| 3UTR-3UTR GCA 90 bp | AGAGAGAGAGAGCGCACGCACATGGCTGAAATCCTAGGCAAGAAGAAAGATTCTTTATATAGTTATTTTTaGATGTCCCCCGAGTTGACT | + |
|
Preference number: 2 (lower is better) Translates to: RERERTHMAEILGKKKDSLYSYF*MSPELT Trigger: AGTCAACTCGGGGGACATGCAAAAATAACTATATAA...AGAATCTTTCTTCTTGCCTAGGATTTCAGCCATGTGCGTGCGCTCTCTCTCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTTTTTCCCATCCTTCCCGATTTACATCTGTTCAGGCCAATTCAAATATGGTGACTAGGGATGCTCCTTaGTCCAAAGTAGATGTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: SFSHPSRFTSVQANSNMVTRDAP*SKVDVK Trigger: CTTGACATCTACTTTGGACCAAGGAGCATCCCTAGT...CACCATATTTGAATTGGCCTGAACAGATGTAAATCGGGAAGGATGGGAAAAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCGTACCCCACTCAGTTAACCTTATATGCATGCCACCTTGCACTAATCTGCTACTGGGTAGGCAAACTTaGGGGAAAAATAACATTAAT | + |
|
Preference number: 2 (lower is better) Translates to: SVPHSVNLICMPPCTNLLLGRQT*GKNNIN Trigger: ATTAATGTTATTTTTCCCCCAAGTTTGCCTACCCAG...TAGCAGATTAGTGCAAGGTGGCATGCATATAAGGTTAACTGAGTGGGGTACGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCACAACAAAAAGTATAATTAGCGTACCCCACTCAGTTAACCTTATATGCATGCCACGAAATTCATGGTaGGGAGGTTTGTCTGCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: STTKSIISVPHSVNLICMPRNSW*GGLSAG Trigger: ACCAGCAGACAAACCTCCCCACCATGAATTTCGTGG...CATGCATATAAGGTTAACTGAGTGGGGTACGCTAATTATACTTTTTGTTGTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
||
| 3UTR-3UTR GCA 90 bp | CAATGTCTACATAAATGCTCCAAGGTGGGACTATGGAAAAATACACACATGACCTTCGGATGGTTCTCCTaGATTTTAAGAGTCCCTATG | + |
|
Preference number: 2 (lower is better) Translates to: QCLHKCSKVGLWKNTHMTFGWFS*ILRVPM Trigger: CATAGGGACTCTTAAAATGCAGGAGAACCATCCGAA...GGTCATGTGTGTATTTTTCCATAGTCCCACCTTGGAGCATTTATGTAGACATTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| 3UTR-3UTR GCA 90 bp | CAATGTCTACATAAATGCTCCAAGGTGGGACTATGGAAAAATACACACATGACCGTCTCCTTAAGACACTaGCTGCAACAGCTGATTAAT | + |
|
Preference number: 2 (lower is better) Translates to: QCLHKCSKVGLWKNTHMTVSLRH*LQQLIN Trigger: ATTAATCAGCTGTTGCAGGCAGTGTCTTAAGGAGAC...GGTCATGTGTGTATTTTTCCATAGTCCCACCTTGGAGCATTTATGTAGACATTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| 3UTR-3UTR TCA 90 bp | AGAGATGCTGTTAAGGGCAATTTAGGAAATGAACTAGGGCTTTGGAGTTCAAAACCTAGGGCTCATGACTaGAAAACAAACAAACACGAA | + |
|
Preference number: 2 (lower is better) Translates to: RDAVKGNLGNELGLWSSKPRAHD*KTNKHE Trigger: TTCGTGTTTGTTTGTTTTTCAGTCATGAGCCCTAGG...TTTTGAACTCCAAAGCCCTAGTTCATTTCCTAAATTGCCCTTAACAGCATCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
||
| 3UTR CCA 72 bp | CACACCCATTGGGCCACCCCGGGCTACATACTCCCCTaGCATACTTTGCAGCCCTGGCGCTCTGATGCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: HTHWATPGYILP*HTLQPWRSDAH Trigger: ATGGGCATCAGAGCGCCAGGGCTGCAAAGTATGCCAGGGGAGTATGTAGCCCGGGGTGGCCCAATGGGTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102878.11 ENSMUST00000177357.4 |
||
| 3UTR-3UTR CAA 90 bp | AACTCGGCTGTCCCATACTCACACCCATTGGGCCACCCCGGGCTACATACTCCCGGCTTGAGGCTGACATaGGCATTCCAGGGTGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: NSAVPYSHPLGHPGLHTPGLRLT*AFQGGA Trigger: AGCCCCACCCTGGAATGCCAATGTCAGCCTCAAGCC...GGGAGTATGTAGCCCGGGGTGGCCCAATGGGTGTGAGTATGGGACAGCCGAGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTGGGGCTGTCCTCCATGCATCATCACTGCGGGGTGGTGAGGGTGTCCAGGAAAAACACACACGGCCTTaGGGTTTCCATGCCTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: GGAVLHASSLRGGEGVQEKHTRP*GFHASS Trigger: GGAGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTT...TTCCTGGACACCCTCACCACCCCGCAGTGATGATGCATGGAGGACAGCCCCACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCATGCATCATCACTGCGGGGTGGTGAGGGTGTCCAGGAATGTACGTATGCATCCATACTCACACCCATaGGGCCACCCCGGGCTACAT | + |
|
Preference number: 3 (lower is better) Translates to: SMHHHCGVVRVSRNVRMHPYSHP*GHPGLH Trigger: ATGTAGCCCGGGGTGGCCCAATGGGTGTGAGTATGG...ATGCATACGTACATTCCTGGACACCCTCACCACCCCGCAGTGATGATGCATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCTTGGGTATAACTCGGCTGTCCCATACTCACACCCATTGGGCCACCCCGGGCCAGATTTATGGCACTTaGGGGACATGCTCTTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: GLGITRLSHTHTHWATPGQIYGT*GTCSFL Trigger: GAGGAAAGAGCATGTCCCCAAAGTGCCATAAATCTG...GCCCGGGGTGGCCCAATGGGTGTGAGTATGGGACAGCCGAGTTATACCCAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| 3UTR CCA 72 bp | AGATGCACAGATGGTAGGCAAGGCGAGGCAGGCAGCTaGAGAAAGCAGAGGGTGGACTTCTTTACCTGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: RCTDGRQGEAGS*RKQRVDFFTCP Trigger: AGGGCAGGTAAAGAAGTCCACCCTCTGCTTTCTCCAGCTGCCTGCCTCGCCTTGCCTACCATCTGTGCATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTAAACACACACGGCCTTTGGGTTTCCATGCCTCCTCCTACCAGTCTCCTTCCATACTCACACCCATaGGGCCACCCCGGGCTACAT | + |
|
Preference number: 3 (lower is better) Translates to: LLNTHGLWVSMPPPTSLLPYSHP*GHPGLH Trigger: ATGTAGCCCGGGGTGGCCCAATGGGTGTGAGTATGG...AAGGAGACTGGTAGGAGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGCATGTCCCCCGAGTTGACTTCGGATGGTTCTCCTGCATTTTAAGAGTCCCTCCATACTCACACCCATaGGGCCACCCCGGGCTACAT | + |
|
Preference number: 3 (lower is better) Translates to: LHVPRVDFGWFSCILRVPPYSHP*GHPGLH Trigger: ATGTAGCCCGGGGTGGCCCAATGGGTGTGAGTATGG...AGGGACTCTTAAAATGCAGGAGAACCATCCGAAGTCAACTCGGGGGACATGCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTGGGGCTGTCCTCCATGCATCATCACTGCGGGGTGGTGAGGGTGTCCAGGAACACATGACCAATGCTTaGCTGAGAAACAAAGTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: GGAVLHASSLRGGEGVQEHMTNA*LRNKVN Trigger: GTTGACTTTGTTTCTCAGCAAAGCATTGGTCATGTG...TTCCTGGACACCCTCACCACCCCGCAGTGATGATGCATGGAGGACAGCCCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGCATGTCCCCCGAGTTGACTTCGGATGGTTCTCCTGCATTTTAAGAGTCCCTCTCCCCTGGCATACTTaGCAGCCCTGGCGCTCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: LHVPRVDFGWFSCILRVPLPWHT*QPWRSD Trigger: ATCAGAGCGCCAGGGCTGCAAAGTATGCCAGGGGAG...AGGGACTCTTAAAATGCAGGAGAACCATCCGAAGTCAACTCGGGGGACATGCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000102878.11 ENSMUST00000177357.4 |
||
| 3UTR-3UTR CAA 90 bp | ATGTCCATGACTTGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGGAAACACACACGGCCTTaGGGTTTCCATGCCTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: MSMTCALIVGSPVLRTEGKHTRP*GFHASS Trigger: GGAGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTT...CCCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACAAGTCATGGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCTGGGACAGTTTTCCTAGGCTCACTGCACTAGGCCTGCCACTGAAGATTGCAAAACACACACGGCCTTaGGGTTTCCATGCCTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: IWDSFPRLTALGLPLKIAKHTRP*GFHASS Trigger: GGAGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTT...TGCAATCTTCAGTGGCAGGCCTAGTGCAGTGAGCCTAGGAAAACTGTCCCAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTAAACACACACGGCCTTTGGGTTTCCATGCCTCCTCCTACCAGTCTCCTTAGACAAAGGCCCCGTTaGTACTTACTTCCCCCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LLNTHGLWVSMPPPTSLLRQRPR*YLLPPG Trigger: GCCAGGGGGAAGTAAGTACAAACGGGGCCTTTGTCT...AAGGAGACTGGTAGGAGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCTTGGGTATAACTCGGCTGTCCCATACTCACACCCATTGGGCCACCCCGGGCTATCAGCCTAAAACCTaGATCAAAACCAACGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: GLGITRLSHTHTHWATPGYQPKT*IKTNER Trigger: TCTCTCGTTGGTTTTGATCAAGGTTTTAGGCTGATA...GCCCGGGGTGGCCCAATGGGTGTGAGTATGGGACAGCCGAGTTATACCCAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| 3UTR TCA 72 bp | AAAGTCTTACCTGGCGCTCTGATGCCCATGTGCTGCTaGCCGTCCATTACAAAACCTCCCATTGGCTGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: KVLPGALMPMCC*PSITKPPIGCP Trigger: TGGACAGCCAATGGGAGGTTTTGTAATGGACGGTCAGCAGCACATGGGCATCAGAGCGCCAGGTAAGACTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
||
| 3UTR GCA 72 bp | AGAGCAGAGTGGTATTTCAGAGGCAGGGTTCAACCCTaGAGCATCACCCCAGGTATAATTTGGTCGCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: RAEWYFRGRVQP*SITPGIIWSLP Trigger: AGGCAGCGACCAAATTATACCTGGGGTGATGCTGCAGGGTTGAACCCTGCCTCTGAAATACCACTCTGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
||
| 3UTR-3UTR CAA 90 bp | GAATGGAACTCCATAGTCCTTGCAGGAAAAGACCTGATTCGAGATCAGTCACCACTCCCCTGGCATACTTaGCAGCCTTCCCCCTGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: EWNSIVLAGKDLIRDQSPLPWHT*QPSPWL Trigger: AAGCCAGGGGGAAGGCTGCAAAGTATGCCAGGGGAG...TGGTGACTGATCTCGAATCAGGTCTTTTCCTGCAAGGACTATGGAGTTCCATTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068264.14 |
||
| 3UTR-3UTR CAA 90 bp | GCAAATTCAAGCCCCAGGCTAGAAAGAGGGAGAGGGAGGAGAAGAGAGAGAGAGGTGAATGTCCATGACTaGTGCACTCATTGTCGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: ANSSPRLERGRGRRREREVNVHD*CTHCRV Trigger: GACCCGACAATGAGTGCACAAGTCATGGACATTCAC...CTCTCTCTCTCTTCTCCTCCCTCTCCCTCTTTCTAGCCTGGGGCTTGAATTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCTTGGGTATAACTCGGCTGTCCCATACTCACACCCATTGGGCCACCCCGGGCAACAGTTTTGCTTGTTaGAACTCAAATTTCTGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: GLGITRLSHTHTHWATPGNSFAC*NSNFWG Trigger: ACCCCAGAAATTTGAGTTCAAACAAGCAAAACTGTT...GCCCGGGGTGGCCCAATGGGTGTGAGTATGGGACAGCCGAGTTATACCCAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGAACTCCATAGTCCTTGCAGGAAAAGACCTGATTCGAGATCAGTCACCATTGGTCACTAGAGGGGACTaGCCTGCTCGGTTGGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: WNSIVLAGKDLIRDQSPLVTRGD*PARLDW Trigger: CCAGTCCAACCGAGCAGGCAAGTCCCCTCTAGTGAC...CAATGGTGACTGATCTCGAATCAGGTCTTTTCCTGCAAGGACTATGGAGTTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177357.4 |
||
| 3UTR-3UTR CAA 90 bp | TCCATGACTTGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGGCTTCTCCTGGTGAATGGCTaGAGGATGCTTTTCGCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: SMTCALIVGSPVLRTEGLLLVNG*RMLFAC Trigger: GCAAGCGAAAAGCATCCTCAAGCCATTCACCAGGAG...AAGCCCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACAAGTCATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177357.4 |
||
| 3UTR-3UTR CAA 90 bp | GCTCCATCATCATCAAGGGTGAAAGGCAGAACGCCATTGCTAAGTATGTTCAATGGCTTGAGGCTGACATaGGCATTCCAGGGTGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: APSSSRVKGRTPLLSMFNGLRLT*AFQGGA Trigger: AGCCCCACCCTGGAATGCCAATGTCAGCCTCAAGCC...ATTGAACATACTTAGCAATGGCGTTCTGCCTTTCACCCTTGATGATGATGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| 3UTR TCA 72 bp | GAGGGGCCTCTTGTCTTCTGCATGGATTGCTCTAGTTaGTGGAAAGTGACGGGCGTATTGTTTCTGAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: EGPLVFCMDCSS*WKVTGVLFLRA Trigger: GGCTCTCAGAAACAATACGCCCGTCACTTTCCATCAACTAGAGCAATCCATGCAGAAGACAAGAGGCCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| 3UTR TCA 72 bp | GTGAATGGCTTGAGGATGCTTTTCGCTTGCCTGACTTaGATACAGTCACTAGAGGGGACTTGCCTGCTCGGT | + |
|
Preference number: 3 (lower is better) Translates to: VNGLRMLFACLT*IQSLEGTCLLG Trigger: ACCGAGCAGGCAAGTCCCCTCTAGTGACTGTATTCAAGTCAGGCAAGCGAAAAGCATCCTCAAGCCATTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177357.4 |
||
| 3UTR-3UTR CAA 90 bp | GTCTTATATAGTTATTTTTGCATGTCCCCCGAGTTGACTTCGGATGGTTCTCCTCCATACTCACACCCATaGGGCCACCCCGGGCTACAT | + |
|
Preference number: 3 (lower is better) Translates to: VLYSYFCMSPELTSDGSPPYSHP*GHPGLH Trigger: ATGTAGCCCGGGGTGGCCCAATGGGTGTGAGTATGG...AGGAGAACCATCCGAAGTCAACTCGGGGGACATGCAAAAATAACTATATAAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| 3UTR-3UTR CAA 90 bp | AGATGTCAAGAATGGAACTCCATAGTCCTTGCAGGAAAAGACCTGATTCGAGATGGCTTGAGGCTGACATaGGCATTCCAGGGTGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RCQEWNSIVLAGKDLIRDGLRLT*AFQGGA Trigger: AGCCCCACCCTGGAATGCCAATGTCAGCCTCAAGCC...ATCTCGAATCAGGTCTTTTCCTGCAAGGACTATGGAGTTCCATTCTTGACATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGTCAAGAATGGAACTCCATAGTCCTTGCAGGAAAAGACCTGATTCGAGATCAGGCTTGAGGCTGACATaGGCATTCCAGGGTGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: MSRMELHSPCRKRPDSRSGLRLT*AFQGGA Trigger: AGCCCCACCCTGGAATGCCAATGTCAGCCTCAAGCC...TGATCTCGAATCAGGTCTTTTCCTGCAAGGACTATGGAGTTCCATTCTTGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| 3UTR-3UTR CAA 90 bp | AGATCAGTCACCATTGTAGACAACGCATATTCCCTTAAGCTACTGAGCGTGAATCTCCCCTGGCATACTTaGCAGCCCTGGCGCTCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: RSVTIVDNAYSLKLLSVNLPWHT*QPWRSD Trigger: ATCAGAGCGCCAGGGCTGCAAAGTATGCCAGGGGAG...ATTCACGCTCAGTAGCTTAAGGGAATATGCGTTGTCTACAATGGTGACTGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102878.11 ENSMUST00000177357.4 |
||
| 3UTR-3UTR CAA 90 bp | CATGCTCTTTCCTCTCCTTGCACTGCTGCAGACTGCTTACATTTTGCAAATCAGAGACAAAGGCCCCGTTaGTACTTACTTCCCCCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: HALSSPCTAADCLHFANQRQRPR*YLLPPG Trigger: GCCAGGGGGAAGTAAGTACAAACGGGGCCTTTGTCT...CTGATTTGCAAAATGTAAGCAGTCTGCAGCAGTGCAAGGAGAGGAAAGAGCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGTCCATGACTTGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGGTTTCGCTTGCCTGACTaGAATACAGTCACTAGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: MSMTCALIVGSPVLRTEGFRLPD*NTVTRG Trigger: CCCTCTAGTGACTGTATTCAAGTCAGGCAAGCGAAA...CCCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACAAGTCATGGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177357.4 |
||
| 3UTR TCA 72 bp | AGAGAGAGAGAGAGAGAGAGAGCGCACGCACATGGCTaGAATCCTAGGCAAGAAGAAAGATTCTTCTGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: RERERERAHAHG*NPRQEERFFCL Trigger: CAGGCAGAAGAATCTTTCTTCTTGCCTAGGATTTCAGCCATGTGCGTGCGCTCTCTCTCTCTCTCTCTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| 3UTR TCA 72 bp | GAGAGGACGCAGAAGGAGAATGTTCCTAGGACAAAGTaGAGACAAAGGCCCCGTTTGTACTTACTTCCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: ERTQKENVPRTK*RQRPRLYLLPP Trigger: AGGGGGAAGTAAGTACAAACGGGGCCTTTGTCTTCACTTTGTCCTAGGAACATTCTCCTTCTGCGTCCTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| 3UTR GCA 72 bp | ACTGCGGTTAGACAGATTTATGGCACTTTGGGGACATaGTCTTTCCTCTCCTTGCACTGCTGCAGACTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: TAVRQIYGTLGT*SFLSLHCCRLL Trigger: AAGCAGTCTGCAGCAGTGCAAGGAGAGGAAAGAGCATGTCCCCAAAGTGCCATAAATCTGTCTAACCGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| 3UTR CCA 72 bp | GATGTGACAGTTAGGCTTCTAAACACACACGGCCTTTaGGTTTCCATGCCTCCTCCTACCAGTCTCCTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: DVTVRLLNTHGL*VSMPPPTSLLK Trigger: CTTAAGGAGACTGGTAGGAGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAGCCTAACTGTCACATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| 3UTR CCA 72 bp | AAGAAAAGAAGACACTGGAACCTGACTAACTGGGTATaGGCCCAGTGTGGTGCCAACAGAGCTTTGATGGAG | + |
|
Preference number: 3 (lower is better) Translates to: KKRRHWNLTNWV*AQCGANRALME Trigger: CTCCATCAAAGCTCTGTTGGCACCACACTGGGCCCATACCCAGTTAGTCAGGTTCCAGTGTCTTCTTTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGCTACTGAGCGTGAATGTCCATGACTTGTGCACTCATTGTCGGGTCTCCTGTGAGGATGCTTTTCGCTaGCCTGACTTGAATACAGTC | + |
|
Preference number: 3 (lower is better) Translates to: KLLSVNVHDLCTHCRVSCEDAFR*PDLNTV Trigger: GACTGTATTCAAGTCAGGCAAGCGAAAAGCATCCTC...ACAGGAGACCCGACAATGAGTGCACAAGTCATGGACATTCACGCTCAGTAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177357.4 |
||
| 3UTR GCA 72 bp | TCCCTTAAGCTACTGAGCGTGAATGTCCATGACTTGTaGACTCATTGTCGGGTCTCCTGTGTTAAGAACCGA | + |
|
Preference number: 3 (lower is better) Translates to: SLKLLSVNVHDL*THCRVSCVKNR Trigger: TCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACAAGTCATGGACATTCACGCTCAGTAGCTTAAGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| 3UTR CCA 72 bp | ATGCATCAACTGCGGTTAGACAGATTTATGGCACTTTaGGGACATGCTCTTTCCTCTCCTTGCACTGCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: MHQLRLDRFMAL*GHALSSPCTAA Trigger: TGCAGCAGTGCAAGGAGAGGAAAGAGCATGTCCCCAAAGTGCCATAAATCTGTCTAACCGCAGTTGATGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAGATGCTGTTAAGGGCAATTTAGGAAATGAACTAGGGCTTTGGAGTTCAAAAGGCTTGAGGCTGACATaGGCATTCCAGGGTGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RDAVKGNLGNELGLWSSKGLRLT*AFQGGA Trigger: AGCCCCACCCTGGAATGCCAATGTCAGCCTCAAGCC...TTTTGAACTCCAAAGCCCTAGTTCATTTCCTAAATTGCCCTTAACAGCATCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCCACTCAGTTAACCTTATATGCATGCCACCTTGCACTAATCTGCTACTTTCATCATGGTGGGGAGGTTaGTCTGCTGGTTCCATCATG | + |
|
Preference number: 3 (lower is better) Translates to: PHSVNLICMPPCTNLLLSSWWGG*SAGSIM Trigger: CATGATGGAACCAGCAGACAAACCTCCCCACCATGA...TGAAAGTAGCAGATTAGTGCAAGGTGGCATGCATATAAGGTTAACTGAGTGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
||
| 3UTR-3UTR CAA 90 bp | ACACACGGCCTTTGGGTTTCCATGCCTCCTCCTACCAGTCTCCTTAAGACACTGAACAGTTTTGCTTGTTaGAACTCAAATTTCTGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: THGLWVSMPPPTSLLKTLNSFAC*NSNFWG Trigger: ACCCCAGAAATTTGAGTTCAAACAAGCAAAACTGTT...CAGTGTCTTAAGGAGACTGGTAGGAGGAGGCATGGAAACCCAAAGGCCGTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| 3UTR TCA 72 bp | ATCATGGGCATTTTAAGAAAAGAAGACACTGGAACCTaGCTAACTGGGTATGGGCCCAGTGTGGTGCCAACA | + |
|
Preference number: 3 (lower is better) Translates to: IMGILRKEDTGT*LTGYGPSVVPT Trigger: TGTTGGCACCACACTGGGCCCATACCCAGTTAGTCAGGTTCCAGTGTCTTCTTTTCTTAAAATGCCCATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
||
| 3UTR CCA 72 bp | GCCATGCACCAGGGAGTGGTCATAGTGGCAGAAAGCTaGGTAGGCAAACTTGGGGGAAAAATAACATTAATA | + |
|
Preference number: 3 (lower is better) Translates to: AMHQGVVIVAES*VGKLGGKITLI Trigger: TATTAATGTTATTTTTCCCCCAAGTTTGCCTACCCAGCTTTCTGCCACTATGACCACTCCCTGGTGCATGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
||
| 3UTR CCA 72 bp | CATTTTAAGAAAAGAAGACACTGGAACCTGACTAACTaGGTATGGGCCCAGTGTGGTGCCAACAGAGCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: HFKKRRHWNLTN*VWAQCGANRAL Trigger: CAAAGCTCTGTTGGCACCACACTGGGCCCATACCCAGTTAGTCAGGTTCCAGTGTCTTCTTTTCTTAAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
||
| 3UTR CCA 72 bp | TGGTTCCATCATGGGCATTTTAAGAAAAGAAGACACTaGAACCTGACTAACTGGGTATGGGCCCAGTGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: WFHHGHFKKRRH*NLTNWVWAQCG Trigger: ACCACACTGGGCCCATACCCAGTTAGTCAGGTTCCAGTGTCTTCTTTTCTTAAAATGCCCATGATGGAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGTCAAGAATGGAACTCCATAGTCCTTGCAGGAAAAGACCTGATTCGAGATCAGTGAATGTCCATGACTaGTGCACTCATTGTCGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: MSRMELHSPCRKRPDSRSVNVHD*CTHCRV Trigger: GACCCGACAATGAGTGCACAAGTCATGGACATTCAC...TGATCTCGAATCAGGTCTTTTCCTGCAAGGACTATGGAGTTCCATTCTTGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| 3UTR TCA 72 bp | AAAGGCAACAGTGTGGTTCTGACTATGGCAATCCTATaGAAGCCAGGGAACATTGTGATGAAGGAAGGGACT | + |
|
Preference number: 3 (lower is better) Translates to: KGNSVVLTMAIL*KPGNIVMKEGT Trigger: AGTCCCTTCCTTCATCACAATGTTCCCTGGCTTTCATAGGATTGCCATAGTCAGAACCACACTGTTGCCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| 3UTR GCA 72 bp | GGACATGCTCTTTCCTCTCCTTGCACTGCTGCAGACTaGTTACATTTTGCAAATCAGTCTGTTGCTATGACA | + |
|
Preference number: 3 (lower is better) Translates to: GHALSSPCTAAD*LHFANQSVAMT Trigger: TGTCATAGCAACAGACTGATTTGCAAAATGTAAGCAGTCTGCAGCAGTGCAAGGAGAGGAAAGAGCATGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| 3UTR TCA 72 bp | ATTCTGGAGTCTGACGTCATGACTGCACTCAATGACTaGAGCTGGACCTGGAGTTTGCATACTTTTAAATGC | + |
|
Preference number: 3 (lower is better) Translates to: ILESDVMTALND*SWTWSLHTFKC Trigger: GCATTTAAAAGTATGCAAACTCCAGGTCCAGCTTCAGTCATTGAGTGCAGTCATGACGTCAGACTCCAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCACAACAAAAAGTATAATTAGCGTACCCCACTCAGTTAACCTTATATGCATGTTACAAAACCTCCCATaGGCTGTCCATCAGGGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: STTKSIISVPHSVNLICMLQNLP*AVHQGY Trigger: ATAACCCTGATGGACAGCCAATGGGAGGTTTTGTAA...CATGCATATAAGGTTAACTGAGTGGGGTACGCTAATTATACTTTTTGTTGTGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAGATGCTGTTAAGGGCAATTTAGGAAATGAACTAGGGCTTTGGAGTTCAAAATGGCTTTTTGGTGTCTaGCAGGTTAGTGTAGAAATG | + |
|
Preference number: 3 (lower is better) Translates to: RDAVKGNLGNELGLWSSKWLFGV*QVSVEM Trigger: CATTTCTACACTAACCTGCAAGACACCAAAAAGCCA...TTTTGAACTCCAAAGCCCTAGTTCATTTCCTAAATTGCCCTTAACAGCATCTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| 3UTR GCA 72 bp | AGTATAATTAGCGTACCCCACTCAGTTAACCTTATATaGATGCCACCTTGCACTAATCTGCTACTTTCACAA | + |
|
Preference number: 3 (lower is better) Translates to: SIISVPHSVNLI*MPPCTNLLLSQ Trigger: TTGTGAAAGTAGCAGATTAGTGCAAGGTGGCATGCATATAAGGTTAACTGAGTGGGGTACGCTAATTATACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000185131.8 |
||
| 3UTR CCA 72 bp | ATGGAATGCTTTCAGAGTGAATTGTTAAACTTATATTaGACTCCCACCCACAGAAGAAGACCAGCATGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: MECFQSELLNLY*TPTHRRRPACV Trigger: AACACATGCTGGTCTTCTTCTGTGGGTGGGAGTCCAATATAAGTTTAACAATTCACTCTGAAAGCATTCCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCACAACAAAAAGTATAATTAGCGTACCCCACTCAGTTAACCTTATATGCATGCACATGACCAATGCTTaGCTGAGAAACAAAGTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: STTKSIISVPHSVNLICMHMTNA*LRNKVN Trigger: GTTGACTTTGTTTCTCAGCAAAGCATTGGTCATGTG...CATGCATATAAGGTTAACTGAGTGGGGTACGCTAATTATACTTTTTGTTGTGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000185131.8 |
||
| 3UTR TCA 72 bp | CCCGATTTACATCTGTTCAGGCCAATTCAAATATGGTaGGTAAATGAATTAGACATGCAAATTCAAGCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: PDLHLFRPIQIW*VNELDMQIQAP Trigger: TGGGGCTTGAATTTGCATGTCTAATTCATTTACTCACCATATTTGAATTGGCCTGAACAGATGTAAATCGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| 3UTR GCA 72 bp | CAGCTTAAACATGTTATTTTGAACCATTTAGCTGGCTaGCATGCAGAAATTCTGTACAGCTGTTCTGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: QLKHVILNHLAG*HAEILYSCSGK Trigger: TTTTCCAGAACAGCTGTACAGAATTTCTGCATGGCAGCCAGCTAAATGGTTCAAAATAACATGTTTAAGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
||
| 3UTR CCA 72 bp | AAGTTAATTCTTTCTCTCAGGCCAGTTCTATATACCTaGGAGACTACAGTTTCAAGTGTTATCTGTGTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: KLILSLRPVLYT*ETTVSSVICVQ Trigger: TTGAACACAGATAACACTTGAAACTGTAGTCTCCCAGGTATATAGAACTGGCCTGAGAGAAAGAATTAACTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
||
| CDS-3UTR TCA 90 bp | GGTGGGGCTGTCCTCCATGCATCATCACTGCGGGGTGGTGAGGGTGTCCAGGAAGCCCGGGGTTCCTCCTaGACGAGTGGATGCCGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GGAVLHASSLRGGEGVQEARGSS*TSGCRV Trigger: GACACGGCATCCACTCGTTCAGGAGGAACCCCGGGC...TTCCTGGACACCCTCACCACCCCGCAGTGATGATGCATGGAGGACAGCCCCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| CDS-3UTR CCA 90 bp | GGTGGGGCTGTCCTCCATGCATCATCACTGCGGGGTGGTGAGGGTGTCCAGGAAGGTGGACCGGTTGCATaGACCTGGCTGCATGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GGAVLHASSLRGGEGVQEGGPVA*TWLHAG Trigger: ACCCGCATGCAGCCAGGTCCATGCAACCGGTCCACC...TTCCTGGACACCCTCACCACCCCGCAGTGATGATGCATGGAGGACAGCCCCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| CDS-3UTR CCA 90 bp | GGTGGGGCTGTCCTCCATGCATCATCACTGCGGGGTGGTGAGGGTGTCCAGGAATGGGGGCCATGGCGTTaGTGTGAGCTGTGTGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GGAVLHASSLRGGEGVQEWGPWR*CELCAG Trigger: ACCCGCACACAGCTCACACCAACGCCATGGCCCCCA...TTCCTGGACACCCTCACCACCCCGCAGTGATGATGCATGGAGGACAGCCCCACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| CDS-3UTR TCA 90 bp | GTGGGGCTGTCCTCCATGCATCATCACTGCGGGGTGGTGAGGGTGTCCAGGAATGCTGTGTGCGGGTACTaGTGCGAGTGCAGAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VGLSSMHHHCGVVRVSRNAVCGY*CECRGG Trigger: GCCTCCTCTGCACTCGCATCAGTACCCGCACACAGC...ATTCCTGGACACCCTCACCACCCCGCAGTGATGATGCATGGAGGACAGCCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| CDS-3UTR GCA 90 bp | GGTGGGGCTGTCCTCCATGCATCATCACTGCGGGGTGGTGAGGGTGTCCAGGAAAGGTGGTGGACCGGTTaGATGGACCTGGCTGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: GGAVLHASSLRGGEGVQERWWTG*MDLAAC Trigger: GCATGCAGCCAGGTCCATGCAACCGGTCCACCACCT...TTCCTGGACACCCTCACCACCCCGCAGTGATGATGCATGGAGGACAGCCCCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| CDS-3UTR CCA 90 bp | TCGGCTGTCCCATACTCACACCCATTGGGCCACCCCGGGCTACATACTCCCCTGCCATGCTGGGGGCCATaGCGTTGGTGTGAGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SAVPYSHPLGHPGLHTPLPCWGP*RWCELC Trigger: ACACAGCTCACACCAACGCCATGGCCCCCAGCATGG...CAGGGGAGTATGTAGCCCGGGGTGGCCCAATGGGTGTGAGTATGGGACAGCCGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| CDS-3UTR TCA 90 bp | GGTATAACTCGGCTGTCCCATACTCACACCCATTGGGCCACCCCGGGCTACATAGCCCGGGGTTCCTCCTaGACGAGTGGATGCCGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GITRLSHTHTHWATPGYIARGSS*TSGCRV Trigger: GACACGGCATCCACTCGTTCAGGAGGAACCCCGGGC...TATGTAGCCCGGGGTGGCCCAATGGGTGTGAGTATGGGACAGCCGAGTTATACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| CDS-3UTR CCA 90 bp | GTGGGGCTGTCCTCCATGCATCATCACTGCGGGGTGGTGAGGGTGTCCAGGAATCCACTGTGTGAAGTATaGCCACCGCTGGAAGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VGLSSMHHHCGVVRVSRNPLCEV*PPLEGP Trigger: GGGCCCTTCCAGCGGTGGCCATACTTCACACAGTGG...ATTCCTGGACACCCTCACCACCCCGCAGTGATGATGCATGGAGGACAGCCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| CDS-3UTR TCA 90 bp | TGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGGCTTGAGGCTGACGCCCGGGGTTCCTCCTaGACGAGTGGATGCCGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CALIVGSPVLRTEGLEADARGSS*TSGCRV Trigger: GACACGGCATCCACTCGTTCAGGAGGAACCCCGGGC...GTCAGCCTCAAGCCCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| CDS-3UTR GCA 90 bp | GGTGGGGCTGTCCTCCATGCATCATCACTGCGGGGTGGTGAGGGTGTCCAGGAAACATCGTGGAGGGGATaGCTACTCCATCCATACCCC | + |
|
Preference number: 4 (lower is better) Translates to: GGAVLHASSLRGGEGVQETSWRG*LLHPYP Trigger: GGGGTATGGATGGAGTAGGCATCCCCTCCACGATGT...TTCCTGGACACCCTCACCACCCCGCAGTGATGATGCATGGAGGACAGCCCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| CDS-3UTR CCA 90 bp | GGTATAACTCGGCTGTCCCATACTCACACCCATTGGGCCACCCCGGGCTACATAGGCCCGTGGTTCAGGTaGTGGACCGGTTGCATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GITRLSHTHTHWATPGYIGPWFR*WTGCMD Trigger: GTCCATGCAACCGGTCCACCACCTGAACCACGGGCC...TATGTAGCCCGGGGTGGCCCAATGGGTGTGAGTATGGGACAGCCGAGTTATACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| CDS-3UTR CCA 90 bp | GGTATAACTCGGCTGTCCCATACTCACACCCATTGGGCCACCCCGGGCTACATATGGGGGCCATGGCGTTaGTGTGAGCTGTGTGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GITRLSHTHTHWATPGYIWGPWR*CELCAG Trigger: ACCCGCACACAGCTCACACCAACGCCATGGCCCCCA...TATGTAGCCCGGGGTGGCCCAATGGGTGTGAGTATGGGACAGCCGAGTTATACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| CDS-3UTR TCA 90 bp | TGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGGCTTGAGGCTGACGCTGTGTGCGGGTACTaGTGCGAGTGCAGAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CALIVGSPVLRTEGLEADAVCGY*CECRGG Trigger: GCCTCCTCTGCACTCGCATCAGTACCCGCACACAGC...GTCAGCCTCAAGCCCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| CDS-3UTR TCA 90 bp | TCCATGCATCATCACTGCGGGGTGGTGAGGGTGTCCAGGAATGTACGTATGCATGCCCGGGGTTCCTCCTaGACGAGTGGATGCCGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SMHHHCGVVRVSRNVRMHARGSS*TSGCRV Trigger: GACACGGCATCCACTCGTTCAGGAGGAACCCCGGGC...ATGCATACGTACATTCCTGGACACCCTCACCACCCCGCAGTGATGATGCATGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| CDS-3UTR GCA 90 bp | GGTGGGGCTGTCCTCCATGCATCATCACTGCGGGGTGGTGAGGGTGTCCAGGAAAGGGTGCTTGCTCACTaGTGTTATCCCCACTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GGAVLHASSLRGGEGVQERVLAH*CYPHCV Trigger: CACACAGTGGGGATAACAGCAGTGAGCAAGCACCCT...TTCCTGGACACCCTCACCACCCCGCAGTGATGATGCATGGAGGACAGCCCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000177357.4 |
||
| CDS-3UTR CCA 90 bp | CATGCATCATCACTGCGGGGTGGTGAGGGTGTCCAGGAATGTACGTATGCATGGAAGTATGGCCACCGCTaGAAGGGCCCGGGGTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HASSLRGGEGVQECTYAWKYGHR*KGPGFL Trigger: GAGGAACCCCGGGCCCTTCCAGCGGTGGCCATACTT...CCATGCATACGTACATTCCTGGACACCCTCACCACCCCGCAGTGATGATGCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| CDS-3UTR TCA 90 bp | GGTGGGGCTGTCCTCCATGCATCATCACTGCGGGGTGGTGAGGGTGTCCAGGAATTCGCTTGCCTGACTTaGATACAGTCACTAGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGAVLHASSLRGGEGVQEFACLT*IQSLEG Trigger: CCCCTCTAGTGACTGTATTCAAGTCAGGCAAGCGAA...TTCCTGGACACCCTCACCACCCCGCAGTGATGATGCATGGAGGACAGCCCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
||
| CDS-3UTR CCA 90 bp | ACACACGGCCTTTGGGTTTCCATGCCTCCTCCTACCAGTCTCCTTAAGACACTGGGCCCGTGGTTCAGGTaGTGGACCGGTTGCATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: THGLWVSMPPPTSLLKTLGPWFR*WTGCMD Trigger: GTCCATGCAACCGGTCCACCACCTGAACCACGGGCC...CAGTGTCTTAAGGAGACTGGTAGGAGGAGGCATGGAAACCCAAAGGCCGTGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CCA 90 bp | TGGGTTTCCATGCCTCCTCCTACCAGTCTCCTTAAGACACTGCCTGCAACAGCTCCGAGGAACCCATGCTaGGGGCCATGGCGTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: WVSMPPPTSLLKTLPATAPRNPC*GPWRWC Trigger: ACACCAACGCCATGGCCCCCAGCATGGGTTCCTCGG...AGCTGTTGCAGGCAGTGTCTTAAGGAGACTGGTAGGAGGAGGCATGGAAACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CCA 90 bp | CATGCATCATCACTGCGGGGTGGTGAGGGTGTCCAGGAATGTACGTATGCATGGCCACTGTGTGAAGTATaGCCACCGCTGGAAGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: HASSLRGGEGVQECTYAWPLCEV*PPLEGP Trigger: GGGCCCTTCCAGCGGTGGCCATACTTCACACAGTGG...CCATGCATACGTACATTCCTGGACACCCTCACCACCCCGCAGTGATGATGCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| CDS-3UTR GCA 90 bp | TGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGGCTTGAGGCTGACATGGACCTGGCTGCATaGGGGTCCCCATACATCGTG | + |
|
Preference number: 4 (lower is better) Translates to: CALIVGSPVLRTEGLEADMDLAA*GSPYIV Trigger: CACGATGTATGGGGACCCGCATGCAGCCAGGTCCAT...GTCAGCCTCAAGCCCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| CDS-3UTR GCA 90 bp | GCAAATTCAAGCCCCAGGCTAGAAAGAGGGAGAGGGAGGAGAAGAGAGAGAGAGAGGTGGTGGACCGGTTaGATGGACCTGGCTGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: ANSSPRLERGRGRRRERERWWTG*MDLAAC Trigger: GCATGCAGCCAGGTCCATGCAACCGGTCCACCACCT...CTCTCTCTCTCTTCTCCTCCCTCTCCCTCTTTCTAGCCTGGGGCTTGAATTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CCA 90 bp | GTTAGGCTTCTAAACACACACGGCCTTTGGGTTTCCATGCCTCCTCCTACCAGTGGTGGACCGGTTGCATaGACCTGGCTGCATGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VRLLNTHGLWVSMPPPTSGGPVA*TWLHAG Trigger: ACCCGCATGCAGCCAGGTCCATGCAACCGGTCCACC...ACTGGTAGGAGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAGCCTAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CCA 90 bp | GTGACAGTTAGGCTTCTAAACACACACGGCCTTTGGGTTTCCATGCCTCCTCCTGGTGGACCGGTTGCATaGACCTGGCTGCATGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VTVRLLNTHGLWVSMPPPGGPVA*TWLHAG Trigger: ACCCGCATGCAGCCAGGTCCATGCAACCGGTCCACC...AGGAGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAGCCTAACTGTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CCA 90 bp | TCCATGCATCATCACTGCGGGGTGGTGAGGGTGTCCAGGAATGTACGTATGCATCCGTGGTTCAGGTGGTaGACCGGTTGCATGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: SMHHHCGVVRVSRNVRMHPWFRW*TGCMDL Trigger: CAGGTCCATGCAACCGGTCCACCACCTGAACCACGG...ATGCATACGTACATTCCTGGACACCCTCACCACCCCGCAGTGATGATGCATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| CDS-3UTR CCA 90 bp | ACAGTTAGGCTTCTAAACACACACGGCCTTTGGGTTTCCATGCCTCCTCCTACCGGCCCGTGGTTCAGGTaGTGGACCGGTTGCATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TVRLLNTHGLWVSMPPPTGPWFR*WTGCMD Trigger: GTCCATGCAACCGGTCCACCACCTGAACCACGGGCC...GGTAGGAGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAGCCTAACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CCA 90 bp | ATCTGGGACAGTTTTCCTAGGCTCACTGCACTAGGCCTGCCACTGAAGATTGCAGGCCCGTGGTTCAGGTaGTGGACCGGTTGCATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: IWDSFPRLTALGLPLKIAGPWFR*WTGCMD Trigger: GTCCATGCAACCGGTCCACCACCTGAACCACGGGCC...TGCAATCTTCAGTGGCAGGCCTAGTGCAGTGAGCCTAGGAAAACTGTCCCAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTGTGGTGCCAACAGAGCTTTGATGGAGCTGAGAGCAGAGTGGTATTTCAGTGGGGGCCATGGCGTTaGTGTGAGCTGTGTGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PVWCQQSFDGAESRVVFQWGPWR*CELCAG Trigger: ACCCGCACACAGCTCACACCAACGCCATGGCCCCCA...CTGAAATACCACTCTGCTCTCAGCTCCATCAAAGCTCTGTTGGCACCACACTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
||
| CDS-3UTR CCA 90 bp | GTGACAGTTAGGCTTCTAAACACACACGGCCTTTGGGTTTCCATGCCTCCTCCTTGGGGGCCATGGCGTTaGTGTGAGCTGTGTGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VTVRLLNTHGLWVSMPPPWGPWR*CELCAG Trigger: ACCCGCACACAGCTCACACCAACGCCATGGCCCCCA...AGGAGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAGCCTAACTGTCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CCA 90 bp | ACAGTTAGGCTTCTAAACACACACGGCCTTTGGGTTTCCATGCCTCCTCCTACCAAGTATGGCCACCGCTaGAAGGGCCCGGGGTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TVRLLNTHGLWVSMPPPTKYGHR*KGPGFL Trigger: GAGGAACCCCGGGCCCTTCCAGCGGTGGCCATACTT...GGTAGGAGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAGCCTAACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CCA 90 bp | GCAAATTCAAGCCCCAGGCTAGAAAGAGGGAGAGGGAGGAGAAGAGAGAGAGAGCCACTGTGTGAAGTATaGCCACCGCTGGAAGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ANSSPRLERGRGRRREREPLCEV*PPLEGP Trigger: GGGCCCTTCCAGCGGTGGCCATACTTCACACAGTGG...CTCTCTCTCTCTTCTCCTCCCTCTCCCTCTTTCTAGCCTGGGGCTTGAATTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGCTGGAGAAAGCAGAGGGTGGACTTCTTTACCTGCCCTGACAGGGACTTGGGGTGTGTTAGATGCTaGAACAGCCACGCCCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: GSWRKQRVDFFTCPDRDLGCVRC*NSHALM Trigger: CATGAGGGCGTGGCTGTTCCAGCATCTAACACACCC...CAAGTCCCTGTCAGGGCAGGTAAAGAAGTCCACCCTCTGCTTTCTCCAGCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| CDS-3UTR TCA 90 bp | TTGCATGTCCCCCGAGTTGACTTCGGATGGTTCTCCTGCATTTTAAGAGTCCCTGCTGTGTGCGGGTACTaGTGCGAGTGCAGAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LHVPRVDFGWFSCILRVPAVCGY*CECRGG Trigger: GCCTCCTCTGCACTCGCATCAGTACCCGCACACAGC...AGGGACTCTTAAAATGCAGGAGAACCATCCGAAGTCAACTCGGGGGACATGCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR TCA 90 bp | TCGGCTGTCCCATACTCACACCCATTGGGCCACCCCGGGCTACATACTCCCCTGCCGCTATATCTTCATTaGATGACTCTGACGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SAVPYSHPLGHPGLHTPLPLYLH*MTLTSR Trigger: TCTGCTCGTCAGAGTCATTCAATGAAGATATAGCGG...CAGGGGAGTATGTAGCCCGGGGTGGCCCAATGGGTGTGAGTATGGGACAGCCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| CDS-3UTR TCA 90 bp | GGCTGTCCCATACTCACACCCATTGGGCCACCCCGGGCTACATACTCCCCTGGCATGCCACGCTTTTTGTaGCGCTTTTTGTCCTTATCA | + |
|
Preference number: 4 (lower is better) Translates to: GCPILTPIGPPRATYSPGMPRFL*RFLSLS Trigger: TGATAAGGACAAAAAGCGTCACAAAAAGCGTGGCAT...GCCAGGGGAGTATGTAGCCCGGGGTGGCCCAATGGGTGTGAGTATGGGACAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| CDS-3UTR GCA 90 bp | GGCTACATACTCCCCTGGCATACTTTGCAGCCTTCCCCCTGGCTTTCGATTGGTACATCGTGGAGGGGATaGCTACTCCATCCATACCCC | + |
|
Preference number: 4 (lower is better) Translates to: GYILPWHTLQPSPWLSIGTSWRG*LLHPYP Trigger: GGGGTATGGATGGAGTAGGCATCCCCTCCACGATGT...ACCAATCGAAAGCCAGGGGGAAGGCTGCAAAGTATGCCAGGGGAGTATGTAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068264.14 |
||
| CDS-3UTR GCA 90 bp | ATGTCCATGACTTGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGGAGGTGGTGGACCGGTTaGATGGACCTGGCTGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: MSMTCALIVGSPVLRTEGRWWTG*MDLAAC Trigger: GCATGCAGCCAGGTCCATGCAACCGGTCCACCACCT...CCCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACAAGTCATGGACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| CDS-3UTR GCA 90 bp | GGCTTGGGTATAACTCGGCTGTCCCATACTCACACCCATTGGGCCACCCCGGGCCTACTTTGGGAAAGATaGCACGCTTTTTGTGACGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLGITRLSHTHTHWATPGLLWER*HAFCDA Trigger: AGCGTCACAAAAAGCGTGGCATCTTTCCCAAAGTAG...GCCCGGGGTGGCCCAATGGGTGTGAGTATGGGACAGCCGAGTTATACCCAAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| CDS-3UTR GCA 90 bp | TGGGTTTCCATGCCTCCTCCTACCAGTCTCCTTAAGACACTGCCTGCAACAGCTTCCCCTGGCATACTTTaGAGCCCTGGCGCTCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: WVSMPPPTSLLKTLPATASPGIL*SPGALM Trigger: CATCAGAGCGCCAGGGCTGCAAAGTATGCCAGGGGA...AGCTGTTGCAGGCAGTGTCTTAAGGAGACTGGTAGGAGGAGGCATGGAAACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185131.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTTTGGGTTTCCATGCCTCCTCCTACCAGTCTCCTTAAGACACTGCCTGCAGGTCCCCATACATCGTaGAGGGGATGCCTACTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GLWVSMPPPTSLLKTLPAGPHTS*RGCLLH Trigger: ATGGAGTAGGCATCCCCTCCACGATGTATGGGGACC...TGCAGGCAGTGTCTTAAGGAGACTGGTAGGAGGAGGCATGGAAACCCAAAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CCA 90 bp | GTTAGGCTTCTAAACACACACGGCCTTTGGGTTTCCATGCCTCCTCCTACCAGTCCGTGGTTCAGGTGGTaGACCGGTTGCATGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: VRLLNTHGLWVSMPPPTSPWFRW*TGCMDL Trigger: CAGGTCCATGCAACCGGTCCACCACCTGAACCACGG...ACTGGTAGGAGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAGCCTAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CCA 90 bp | GTGACAGTTAGGCTTCTAAACACACACGGCCTTTGGGTTTCCATGCCTCCTCCTCCATGCTGGGGGCCATaGCGTTGGTGTGAGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VTVRLLNTHGLWVSMPPPPCWGP*RWCELC Trigger: ACACAGCTCACACCAACGCCATGGCCCCCAGCATGG...AGGAGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAGCCTAACTGTCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CCA 90 bp | AATGTCCATGACTTGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGCCGAGGAACCCATGCTaGGGGCCATGGCGTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NVHDLCTHCRVSCVKNRGPRNPC*GPWRWC Trigger: ACACCAACGCCATGGCCCCCAGCATGGGTTCCTCGG...CCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACAAGTCATGGACATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| CDS-3UTR CCA 90 bp | ACAGTTAGGCTTCTAAACACACACGGCCTTTGGGTTTCCATGCCTCCTCCTACCCCACTGTGTGAAGTATaGCCACCGCTGGAAGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TVRLLNTHGLWVSMPPPTPLCEV*PPLEGP Trigger: GGGCCCTTCCAGCGGTGGCCATACTTCACACAGTGG...GGTAGGAGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAGCCTAACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR TCA 90 bp | GTGGGGCTGTCCTCCATGCATCATCACTGCGGGGTGGTGAGGGTGTCCAGGAATCCGCTATATCTTCATTaGATGACTCTGACGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VGLSSMHHHCGVVRVSRNPLYLH*MTLTSR Trigger: TCTGCTCGTCAGAGTCATTCAATGAAGATATAGCGG...ATTCCTGGACACCCTCACCACCCCGCAGTGATGATGCATGGAGGACAGCCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| CDS-3UTR TCA 90 bp | CTTCTAAACACACACGGCCTTTGGGTTTCCATGCCTCCTCCTACCAGTCTCCTTTCTTACCTGGCGCTCTaGTGCCCATGTGCTGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLNTHGLWVSMPPPTSLLSYLAL*CPCAAD Trigger: GTCAGCAGCACATGGGCATCAGAGCGCCAGGTAAGA...AAGGAGACTGGTAGGAGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177417.8 |
||
| CDS-3UTR GCA 90 bp | ATGTCCATGACTTGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGGATGGACCTGGCTGCATaGGGGTCCCCATACATCGTG | + |
|
Preference number: 4 (lower is better) Translates to: MSMTCALIVGSPVLRTEGMDLAA*GSPYIV Trigger: CACGATGTATGGGGACCCGCATGCAGCCAGGTCCAT...CCCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACAAGTCATGGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTAAACACACACGGCCTTTGGGTTTCCATGCCTCCTCCTACCAGTCTCCTTATGGACCTGGCTGCATaGGGGTCCCCATACATCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLNTHGLWVSMPPPTSLLMDLAA*GSPYIV Trigger: CACGATGTATGGGGACCCGCATGCAGCCAGGTCCAT...AAGGAGACTGGTAGGAGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR GCA 90 bp | AATGTCCATGACTTGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGAGGTGGTGGACCGGTTaGATGGACCTGGCTGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: NVHDLCTHCRVSCVKNRGRWWTG*MDLAAC Trigger: GCATGCAGCCAGGTCCATGCAACCGGTCCACCACCT...CCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACAAGTCATGGACATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| CDS-3UTR GCA 90 bp | AACTCGGCTGTCCCATACTCACACCCATTGGGCCACCCCGGGCTACATACTCCCCTACTTTGGGAAAGATaGCACGCTTTTTGTGACGCT | + |
|
Preference number: 4 (lower is better) Translates to: NSAVPYSHPLGHPGLHTPLLWER*HAFCDA Trigger: AGCGTCACAAAAAGCGTGGCATCTTTCCCAAAGTAG...GGGAGTATGTAGCCCGGGGTGGCCCAATGGGTGTGAGTATGGGACAGCCGAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| CDS-3UTR GCA 90 bp | GTGACAGTTAGGCTTCTAAACACACACGGCCTTTGGGTTTCCATGCCTCCTCCTTCCATGCATCATCACTaGGGGGTGGTGAGGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VTVRLLNTHGLWVSMPPPSMHHH*GVVRVS Trigger: GGACACCCTCACCACCCCGCAGTGATGATGCATGGA...AGGAGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAGCCTAACTGTCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185131.8 |
||
| CDS-3UTR CCA 90 bp | GATGTGACAGTTAGGCTTCTAAACACACACGGCCTTTGGGTTTCCATGCCTCCTCCGTGGTTCAGGTGGTaGACCGGTTGCATGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: DVTVRLLNTHGLWVSMPPPWFRW*TGCMDL Trigger: CAGGTCCATGCAACCGGTCCACCACCTGAACCACGG...AGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAGCCTAACTGTCACATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CCA 90 bp | GATGTGACAGTTAGGCTTCTAAACACACACGGCCTTTGGGTTTCCATGCCTCCTCCATGCTGGGGGCCATaGCGTTGGTGTGAGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: DVTVRLLNTHGLWVSMPPPCWGP*RWCELC Trigger: ACACAGCTCACACCAACGCCATGGCCCCCAGCATGG...AGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAGCCTAACTGTCACATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CCA 90 bp | AGAGAGAGAGAGCGCACGCACATGGCTGAAATCCTAGGCAAGAAGAAAGATTCTCCGAGGAACCCATGCTaGGGGCCATGGCGTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RERERTHMAEILGKKKDSPRNPC*GPWRWC Trigger: ACACCAACGCCATGGCCCCCAGCATGGGTTCCTCGG...AGAATCTTTCTTCTTGCCTAGGATTTCAGCCATGTGCGTGCGCTCTCTCTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CCA 90 bp | GGTATAACTCGGCTGTCCCATACTCACACCCATTGGGCCACCCCGGGCTACATAGATGCCGTGTCATCATaGTCTCTATTCCAAGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GITRLSHTHTHWATPGYIDAVSS*SLFQEG Trigger: GCCCTCTTGGAATAGAGACCATGATGACACGGCATC...TATGTAGCCCGGGGTGGCCCAATGGGTGTGAGTATGGGACAGCCGAGTTATACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| CDS-3UTR CCA 90 bp | GGCTTGGGTATAACTCGGCTGTCCCATACTCACACCCATTGGGCCACCCCGGGCTATTGGTGGCTACTTTaGGAAAGATGCCACGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GLGITRLSHTHTHWATPGYWWLL*ERCHAF Trigger: AAAAGCGTGGCATCTTTCCCAAAGTAGCCACCAATA...GCCCGGGGTGGCCCAATGGGTGTGAGTATGGGACAGCCGAGTTATACCCAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| CDS-3UTR CCA 90 bp | GGTGGGGCTGTCCTCCATGCATCATCACTGCGGGGTGGTGAGGGTGTCCAGGAATATTGGTGGCTACTTTaGGAAAGATGCCACGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GGAVLHASSLRGGEGVQEYWWLL*ERCHAF Trigger: AAAAGCGTGGCATCTTTCCCAAAGTAGCCACCAATA...TTCCTGGACACCCTCACCACCCCGCAGTGATGATGCATGGAGGACAGCCCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| 3UTR CAA 72 bp | AACTGGGTATGGGCCCAGTGTGGTGCCAACAGAGCTTaGATGGAGCTGAGAGCAGAGTGGTATTTCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NWVWAQCGANRA*MELRAEWYFRG Trigger: GCCTCTGAAATACCACTCTGCTCTCAGCTCCATCAAAGCTCTGTTGGCACCACACTGGGCCCATACCCAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
||
| CDS-3UTR TCA 90 bp | GGCCTTTGGGTTTCCATGCCTCCTCCTACCAGTCTCCTTAAGACACTGCCTGCATCTTTAAAGCGTCATTaGCCGAGGAACCCATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLWVSMPPPTSLLKTLPASLKRH*PRNPCW Trigger: CCAGCATGGGTTCCTCGGTCAATGACGCTTTAAAGA...TGCAGGCAGTGTCTTAAGGAGACTGGTAGGAGGAGGCATGGAAACCCAAAGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTAAACACACACGGCCTTTGGGTTTCCATGCCTCCTCCTACCAGTCTCCTTACATCGTGGAGGGGATaGCTACTCCATCCATACCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLNTHGLWVSMPPPTSLLTSWRG*LLHPYP Trigger: GGGGTATGGATGGAGTAGGCATCCCCTCCACGATGT...AAGGAGACTGGTAGGAGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR GCA 90 bp | GATGTGACAGTTAGGCTTCTAAACACACACGGCCTTTGGGTTTCCATGCCTCCTATGGACCTGGCTGCATaGGGGTCCCCATACATCGTG | + |
|
Preference number: 4 (lower is better) Translates to: DVTVRLLNTHGLWVSMPPMDLAA*GSPYIV Trigger: CACGATGTATGGGGACCCGCATGCAGCCAGGTCCAT...AGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAGCCTAACTGTCACATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR GCA 90 bp | GTTAGGCTTCTAAACACACACGGCCTTTGGGTTTCCATGCCTCCTCCTACCAGTTTGCATGGACCTGGCTaGATGCGGGTCCCCATACAT | + |
|
Preference number: 4 (lower is better) Translates to: VRLLNTHGLWVSMPPPTSLHGPG*MRVPIH Trigger: ATGTATGGGGACCCGCATGCAGCCAGGTCCATGCAA...ACTGGTAGGAGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAGCCTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTAAACACACACGGCCTTTGGGTTTCCATGCCTCCTCCTACCAGTCTCCTTTTGCATGGACCTGGCTaGATGCGGGTCCCCATACAT | + |
|
Preference number: 4 (lower is better) Translates to: LLNTHGLWVSMPPPTSLLLHGPG*MRVPIH Trigger: ATGTATGGGGACCCGCATGCAGCCAGGTCCATGCAA...AAGGAGACTGGTAGGAGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR GCA 90 bp | GCGTACCCCACTCAGTTAACCTTATATGCATGCCACCTTGCACTAATCTGCTACAGGTGGTGGACCGGTTaGATGGACCTGGCTGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: AYPTQLTLYACHLALICYRWWTG*MDLAAC Trigger: GCATGCAGCCAGGTCCATGCAACCGGTCCACCACCT...GTAGCAGATTAGTGCAAGGTGGCATGCATATAAGGTTAACTGAGTGGGGTACGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000185131.8 |
||
| CDS-3UTR GCA 90 bp | GGCCTTTGGGTTTCCATGCCTCCTCCTACCAGTCTCCTTAAGACACTGCCTGCACATCACCTTGCTCACTaGTGTTATCCCCACTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GLWVSMPPPTSLLKTLPAHHLAH*CYPHCV Trigger: CACACAGTGGGGATAACAGCAGTGAGCAAGGTGATG...TGCAGGCAGTGTCTTAAGGAGACTGGTAGGAGGAGGCATGGAAACCCAAAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR GCA 90 bp | TCCATGACTTGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGGCTTTCACTAGAGGGGACTTaGCTGCTCGGTTGGACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SMTCALIVGSPVLRTEGLSLEGT*LLGWTG Trigger: ACCAGTCCAACCGAGCAGGCAAGTCCCCTCTAGTGA...AAGCCCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACAAGTCATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
||
| CDS-3UTR CCA 90 bp | GTGACAGTTAGGCTTCTAAACACACACGGCCTTTGGGTTTCCATGCCTCCTCCTGGTCCCCATACATCGTaGAGGGGATGCCTACTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VTVRLLNTHGLWVSMPPPGPHTS*RGCLLH Trigger: ATGGAGTAGGCATCCCCTCCACGATGTATGGGGACC...AGGAGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAGCCTAACTGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CCA 90 bp | GAATGGAACTCCATAGTCCTTGCAGGAAAAGACCTGATTCGAGATCAGTCACCAGGCCCGTGGTTCAGGTaGTGGACCGGTTGCATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: EWNSIVLAGKDLIRDQSPGPWFR*WTGCMD Trigger: GTCCATGCAACCGGTCCACCACCTGAACCACGGGCC...TGGTGACTGATCTCGAATCAGGTCTTTTCCTGCAAGGACTATGGAGTTCCATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTTTGGGTTTCCATGCCTCCTCCTACCAGTCTCCTTAAGACACTGCCTGCAGATGCCGTGTCATCATaGTCTCTATTCCAAGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLWVSMPPPTSLLKTLPADAVSS*SLFQEG Trigger: GCCCTCTTGGAATAGAGACCATGATGACACGGCATC...TGCAGGCAGTGTCTTAAGGAGACTGGTAGGAGGAGGCATGGAAACCCAAAGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CCA 90 bp | GTGGGGCTGTCCTCCATGCATCATCACTGCGGGGTGGTGAGGGTGTCCAGGAATTATTGGTGGCTACTTTaGGAAAGATGCCACGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VGLSSMHHHCGVVRVSRNYWWLL*ERCHAF Trigger: AAAAGCGTGGCATCTTTCCCAAAGTAGCCACCAATA...ATTCCTGGACACCCTCACCACCCCGCAGTGATGATGCATGGAGGACAGCCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTAAACACACACGGCCTTTGGGTTTCCATGCCTCCTCCTACCAGTCTCCTTGGGTGTGTTAGATGCTaGAACAGCCACGCCCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: LLNTHGLWVSMPPPTSLLGCVRC*NSHALM Trigger: CATGAGGGCGTGGCTGTTCCAGCATCTAACACACCC...AAGGAGACTGGTAGGAGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CCA 90 bp | GTGGGGCTGTCCTCCATGCATCATCACTGCGGGGTGGTGAGGGTGTCCAGGAATTACAAAACCTCCCATTaGCTGTCCATCAGGGTTATA | + |
|
Preference number: 4 (lower is better) Translates to: VGLSSMHHHCGVVRVSRNYKTSH*LSIRVI Trigger: TATAACCCTGATGGACAGCCAATGGGAGGTTTTGTA...ATTCCTGGACACCCTCACCACCCCGCAGTGATGATGCATGGAGGACAGCCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000068264.14 ENSMUST00000177417.8 |
||
| CDS-3UTR CCA 90 bp | ACTTGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGGCTTGAGGCTAGCCCTCCTGGTGAATaGCTTGAGGATGCTTTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: TCALIVGSPVLRTEGLEASPPGE*LEDAFR Trigger: GCGAAAAGCATCCTCAAGCCATTCACCAGGAGGGCT...AGCCTCAAGCCCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
||
| CDS-3UTR CCA 90 bp | GTGACAGTTAGGCTTCTAAACACACACGGCCTTTGGGTTTCCATGCCTCCTCCTATTGGCATTCCAGGGTaGGGCTGTCCTCCATGCATC | + |
|
Preference number: 4 (lower is better) Translates to: VTVRLLNTHGLWVSMPPPIGIPG*GCPPCI Trigger: GATGCATGGAGGACAGCCCCACCCTGGAATGCCAAT...AGGAGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAGCCTAACTGTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185131.8 |
||
| 3UTR CAA 72 bp | GGTGAATGGCTTGAGGATGCTTTTCGCTTGCCTGACTaGAATACAGTCACTAGAGGGGACTTGCCTGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GEWLEDAFRLPD*NTVTRGDLPAR Trigger: CCGAGCAGGCAAGTCCCCTCTAGTGACTGTATTCAAGTCAGGCAAGCGAAAAGCATCCTCAAGCCATTCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177357.4 |
||
| CDS-3UTR TCA 90 bp | TCCATGCATCATCACTGCGGGGTGGTGAGGGTGTCCAGGAATGTACGTATGCATTCTTTAAAGCGTCATTaGCCGAGGAACCCATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SMHHHCGVVRVSRNVRMHSLKRH*PRNPCW Trigger: CCAGCATGGGTTCCTCGGTCAATGACGCTTTAAAGA...ATGCATACGTACATTCCTGGACACCCTCACCACCCCGCAGTGATGATGCATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| CDS-3UTR TCA 90 bp | GTCTTATATAGTTATTTTTGCATGTCCCCCGAGTTGACTTCGGATGGTTCTCCTGCCCGGGGTTCCTCCTaGACGAGTGGATGCCGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLYSYFCMSPELTSDGSPARGSS*TSGCRV Trigger: GACACGGCATCCACTCGTTCAGGAGGAACCCCGGGC...AGGAGAACCATCCGAAGTCAACTCGGGGGACATGCAAAAATAACTATATAAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR TCA 90 bp | AAAATCCTGCAAATCAGACCTTCCTGTCCCTTGCAGGATAACTGTAAGGCTTTTGCCCGGGGTTCCTCCTaGACGAGTGGATGCCGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KILQIRPSCPLQDNCKAFARGSS*TSGCRV Trigger: GACACGGCATCCACTCGTTCAGGAGGAACCCCGGGC...AAAAGCCTTACAGTTATCCTGCAAGGGACAGGAAGGTCTGATTTGCAGGATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR TCA 90 bp | ATGTCCATGACTTGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGGACAGCCACGCCCTCATaGTATTGGTGGCTACTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: MSMTCALIVGSPVLRTEGTATPS*YWWLLW Trigger: CCAAAGTAGCCACCAATATCATGAGGGCGTGGCTGT...CCCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACAAGTCATGGACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
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| CDS-3UTR TCA 90 bp | AAAATCCTGCAAATCAGACCTTCCTGTCCCTTGCAGGATAACTGTAAGGCTTTTGCAGCCCTGGCGCTCTaGTGCCCATGTGCTGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: KILQIRPSCPLQDNCKAFAALAL*CPCAAD Trigger: GTCAGCAGCACATGGGCATCAGAGCGCCAGGGCTGC...AAAAGCCTTACAGTTATCCTGCAAGGGACAGGAAGGTCTGATTTGCAGGATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185131.8 |
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| CDS-3UTR GCA 90 bp | TTGCATGTCCCCCGAGTTGACTTCGGATGGTTCTCCTGCATTTTAAGAGTCCCTTTGCATGGACCTGGCTaGATGCGGGTCCCCATACAT | + |
|
Preference number: 4 (lower is better) Translates to: LHVPRVDFGWFSCILRVPLHGPG*MRVPIH Trigger: ATGTATGGGGACCCGCATGCAGCCAGGTCCATGCAA...AGGGACTCTTAAAATGCAGGAGAACCATCCGAAGTCAACTCGGGGGACATGCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR GCA 90 bp | GCAAATTCAAGCCCCAGGCTAGAAAGAGGGAGAGGGAGGAGAAGAGAGAGAGAGTCCAAGCCATCACCTTaGTCACTGCTGTTATCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ANSSPRLERGRGRRRERESKPSP*SLLLSP Trigger: TGGGGATAACAGCAGTGAGCAAGGTGATGGCTTGGA...CTCTCTCTCTCTTCTCCTCCCTCTCCCTCTTTCTAGCCTGGGGCTTGAATTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR GCA 90 bp | GTGGGGCTGTCCTCCATGCATCATCACTGCGGGGTGGTGAGGGTGTCCAGGAATAAGTCCTGTATCTTGTaGCAACTGCTTTTTCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VGLSSMHHHCGVVRVSRNKSCIL*QLLFLF Trigger: GAACAGAAAAAGCAGTTGGCACAAGATACAGGACTT...ATTCCTGGACACCCTCACCACCCCGCAGTGATGATGCATGGAGGACAGCCCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| CDS-3UTR GCA 90 bp | GATGTGACAGTTAGGCTTCTAAACACACACGGCCTTTGGGTTTCCATGCCTCCTGCCACTGCCCCTCCATaGCCATATTCATGCCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: DVTVRLLNTHGLWVSMPPATAPP*PYSCPF Trigger: GAATGGGCATGAATATGGGCATGGAGGGGCAGTGGC...AGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAGCCTAACTGTCACATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068264.14 |
||
| CDS-3UTR CCA 90 bp | CTGCTGACCGTCCATTACAAAACCTCCCATTGGCTGTCCATCAGGGTTATAAGGGGTCCCCATACATCGTaGAGGGGATGCCTACTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLTVHYKTSHWLSIRVIRGPHTS*RGCLLH Trigger: ATGGAGTAGGCATCCCCTCCACGATGTATGGGGACC...CCTTATAACCCTGATGGACAGCCAATGGGAGGTTTTGTAATGGACGGTCAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
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| CDS-3UTR CCA 90 bp | TCAGACCTTCCTGTCCCTTGCAGGATAACTGTAAGGCTTTTTAATGTAAGGAGGGGTGGACCGGTTGCATaGACCTGGCTGCATGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SDLPVPCRITVRLFNVRRGGPVA*TWLHAG Trigger: ACCCGCATGCAGCCAGGTCCATGCAACCGGTCCACC...CCTCCTTACATTAAAAAGCCTTACAGTTATCCTGCAAGGGACAGGAAGGTCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CCA 90 bp | GATTCGAGATCAGTCACCATTGTAGACAACGCATATTCCCTTAAGCTACTGAGCTGGGGGCCATGGCGTTaGTGTGAGCTGTGTGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: DSRSVTIVDNAYSLKLLSWGPWR*CELCAG Trigger: ACCCGCACACAGCTCACACCAACGCCATGGCCCCCA...GCTCAGTAGCTTAAGGGAATATGCGTTGTCTACAATGGTGACTGATCTCGAATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| CDS-3UTR CCA 90 bp | TCAAGAATGGAACTCCATAGTCCTTGCAGGAAAAGACCTGATTCGAGATCAGTCTGGGGGCCATGGCGTTaGTGTGAGCTGTGTGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SRMELHSPCRKRPDSRSVWGPWR*CELCAG Trigger: ACCCGCACACAGCTCACACCAACGCCATGGCCCCCA...GACTGATCTCGAATCAGGTCTTTTCCTGCAAGGACTATGGAGTTCCATTCTTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 ENSMUST00000185131.8 |
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| CDS-3UTR CCA 90 bp | TGGAACTCCATAGTCCTTGCAGGAAAAGACCTGATTCGAGATCAGTCACCATTGCCATGCTGGGGGCCATaGCGTTGGTGTGAGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: WNSIVLAGKDLIRDQSPLPCWGP*RWCELC Trigger: ACACAGCTCACACCAACGCCATGGCCCCCAGCATGG...CAATGGTGACTGATCTCGAATCAGGTCTTTTCCTGCAAGGACTATGGAGTTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 ENSMUST00000185131.8 |
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| CDS-3UTR CCA 90 bp | AGCGTACCCCACTCAGTTAACCTTATATGCATGCCACCTTGCACTAATCTGCTACCATGCTGGGGGCCATaGCGTTGGTGTGAGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SVPHSVNLICMPPCTNLLPCWGP*RWCELC Trigger: ACACAGCTCACACCAACGCCATGGCCCCCAGCATGG...TAGCAGATTAGTGCAAGGTGGCATGCATATAAGGTTAACTGAGTGGGGTACGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000185131.8 |
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| CDS-3UTR CCA 90 bp | ACACACGGCCTTTGGGTTTCCATGCCTCCTCCTACCAGTCTCCTTAAGACACTGGATGCCGTGTCATCATaGTCTCTATTCCAAGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: THGLWVSMPPPTSLLKTLDAVSS*SLFQEG Trigger: GCCCTCTTGGAATAGAGACCATGATGACACGGCATC...CAGTGTCTTAAGGAGACTGGTAGGAGGAGGCATGGAAACCCAAAGGCCGTGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
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| CDS-3UTR CCA 90 bp | TGGGTTTCCATGCCTCCTCCTACCAGTCTCCTTAAGACACTGCCTGCAACAGCTGATGCCGTGTCATCATaGTCTCTATTCCAAGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: WVSMPPPTSLLKTLPATADAVSS*SLFQEG Trigger: GCCCTCTTGGAATAGAGACCATGATGACACGGCATC...AGCTGTTGCAGGCAGTGTCTTAAGGAGACTGGTAGGAGGAGGCATGGAAACCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
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| CDS-3UTR CCA 90 bp | TCCATGCATCATCACTGCGGGGTGGTGAGGGTGTCCAGGAATGTACGTATGCATTTCCTCCTGAACGAGTaGATGCCGTGTCATCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: SMHHHCGVVRVSRNVRMHFLLNE*MPCHHG Trigger: ACCATGATGACACGGCATCCACTCGTTCAGGAGGAA...ATGCATACGTACATTCCTGGACACCCTCACCACCCCGCAGTGATGATGCATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
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| CDS-3UTR CCA 90 bp | TGGGTTTCCATGCCTCCTCCTACCAGTCTCCTTAAGACACTGCCTGCAACAGCTTTCCTCCTGAACGAGTaGATGCCGTGTCATCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: WVSMPPPTSLLKTLPATAFLLNE*MPCHHG Trigger: ACCATGATGACACGGCATCCACTCGTTCAGGAGGAA...AGCTGTTGCAGGCAGTGTCTTAAGGAGACTGGTAGGAGGAGGCATGGAAACCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
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| CDS-3UTR CCA 90 bp | TCAAGAATGGAACTCCATAGTCCTTGCAGGAAAAGACCTGATTCGAGATCAGTCAAGTATGGCCACCGCTaGAAGGGCCCGGGGTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRMELHSPCRKRPDSRSVKYGHR*KGPGFL Trigger: GAGGAACCCCGGGCCCTTCCAGCGGTGGCCATACTT...GACTGATCTCGAATCAGGTCTTTTCCTGCAAGGACTATGGAGTTCCATTCTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 ENSMUST00000185131.8 |
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| CDS-3UTR TCA 90 bp | AGATCAGTCACCATTGTAGACAACGCATATTCCCTTAAGCTACTGAGCGTGAATGCTGTGTGCGGGTACTaGTGCGAGTGCAGAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RSVTIVDNAYSLKLLSVNAVCGY*CECRGG Trigger: GCCTCCTCTGCACTCGCATCAGTACCCGCACACAGC...ATTCACGCTCAGTAGCTTAAGGGAATATGCGTTGTCTACAATGGTGACTGATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
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| CDS-3UTR TCA 90 bp | CAGAGTGAATTGTTAAACTTATATTGGACTCCCACCCACAGAAGAAGACCAGCAGCTGTGTGCGGGTACTaGTGCGAGTGCAGAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QSELLNLYWTPTHRRRPAAVCGY*CECRGG Trigger: GCCTCCTCTGCACTCGCATCAGTACCCGCACACAGC...TGCTGGTCTTCTTCTGTGGGTGGGAGTCCAATATAAGTTTAACAATTCACTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
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| CDS-3UTR TCA 90 bp | CTTCTAAACACACACGGCCTTTGGGTTTCCATGCCTCCTCCTACCAGTCTCCTTTCTTTAAAGCGTCATTaGCCGAGGAACCCATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLNTHGLWVSMPPPTSLLSLKRH*PRNPCW Trigger: CCAGCATGGGTTCCTCGGTCAATGACGCTTTAAAGA...AAGGAGACTGGTAGGAGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
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| CDS-3UTR GCA 90 bp | AGAGAGAGAGAGCGCACGCACATGGCTGAAATCCTAGGCAAGAAGAAAGATTCTACATCGTGGAGGGGATaGCTACTCCATCCATACCCC | + |
|
Preference number: 4 (lower is better) Translates to: RERERTHMAEILGKKKDSTSWRG*LLHPYP Trigger: GGGGTATGGATGGAGTAGGCATCCCCTCCACGATGT...AGAATCTTTCTTCTTGCCTAGGATTTCAGCCATGTGCGTGCGCTCTCTCTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
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| CDS-3UTR GCA 90 bp | TGGAACTCCATAGTCCTTGCAGGAAAAGACCTGATTCGAGATCAGTCACCATTGATGGACCTGGCTGCATaGGGGTCCCCATACATCGTG | + |
|
Preference number: 4 (lower is better) Translates to: WNSIVLAGKDLIRDQSPLMDLAA*GSPYIV Trigger: CACGATGTATGGGGACCCGCATGCAGCCAGGTCCAT...CAATGGTGACTGATCTCGAATCAGGTCTTTTCCTGCAAGGACTATGGAGTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
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| CDS-3UTR GCA 90 bp | TCCATGACTTGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGGCTTCATCACCTTGCTCACTaGTGTTATCCCCACTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SMTCALIVGSPVLRTEGLHHLAH*CYPHCV Trigger: CACACAGTGGGGATAACAGCAGTGAGCAAGGTGATG...AAGCCCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACAAGTCATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
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| CDS-3UTR GCA 90 bp | GTGACAGTTAGGCTTCTAAACACACACGGCCTTTGGGTTTCCATGCCTCCTCCTTCCAAGCCATCACCTTaGTCACTGCTGTTATCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VTVRLLNTHGLWVSMPPPSKPSP*SLLLSP Trigger: TGGGGATAACAGCAGTGAGCAAGGTGATGGCTTGGA...AGGAGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAGCCTAACTGTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
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| CDS-3UTR GCA 90 bp | TCCATGACTTGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGGCTTTCCAAGCCATCACCTTaGTCACTGCTGTTATCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SMTCALIVGSPVLRTEGLSKPSP*SLLLSP Trigger: TGGGGATAACAGCAGTGAGCAAGGTGATGGCTTGGA...AAGCCCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACAAGTCATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
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| CDS-3UTR GCA 90 bp | GGCCTTTGGGTTTCCATGCCTCCTCCTACCAGTCTCCTTAAGACACTGCCTGCACTACTTTGGGAAAGATaGCACGCTTTTTGTGACGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLWVSMPPPTSLLKTLPALLWER*HAFCDA Trigger: AGCGTCACAAAAAGCGTGGCATCTTTCCCAAAGTAG...TGCAGGCAGTGTCTTAAGGAGACTGGTAGGAGGAGGCATGGAAACCCAAAGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
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| CDS-3UTR GCA 90 bp | GCAAATTCAAGCCCCAGGCTAGAAAGAGGGAGAGGGAGGAGAAGAGAGAGAGAGAATGTCCATGACTTGTaGACTCATTGTCGGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ANSSPRLERGRGRRRERENVHDL*THCRVS Trigger: GGAGACCCGACAATGAGTGCACAAGTCATGGACATT...CTCTCTCTCTCTTCTCCTCCCTCTCCCTCTTTCTAGCCTGGGGCTTGAATTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185131.8 |
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| CDS-3UTR CCA 90 bp | TCAGACCTTCCTGTCCCTTGCAGGATAACTGTAAGGCTTTTTAATGTAAGGAGGCCGTGGTTCAGGTGGTaGACCGGTTGCATGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: SDLPVPCRITVRLFNVRRPWFRW*TGCMDL Trigger: CAGGTCCATGCAACCGGTCCACCACCTGAACCACGG...CCTCCTTACATTAAAAAGCCTTACAGTTATCCTGCAAGGGACAGGAAGGTCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CCA 90 bp | GTCTTATATAGTTATTTTTGCATGTCCCCCGAGTTGACTTCGGATGGTTCTCCTGGCCCGTGGTTCAGGTaGTGGACCGGTTGCATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VLYSYFCMSPELTSDGSPGPWFR*WTGCMD Trigger: GTCCATGCAACCGGTCCACCACCTGAACCACGGGCC...AGGAGAACCATCCGAAGTCAACTCGGGGGACATGCAAAAATAACTATATAAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 ENSMUST00000185131.8 |
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| CDS-3UTR CCA 90 bp | AAAATCCTGCAAATCAGACCTTCCTGTCCCTTGCAGGATAACTGTAAGGCTTTTCCGAGGAACCCATGCTaGGGGCCATGGCGTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KILQIRPSCPLQDNCKAFPRNPC*GPWRWC Trigger: ACACCAACGCCATGGCCCCCAGCATGGGTTCCTCGG...AAAAGCCTTACAGTTATCCTGCAAGGGACAGGAAGGTCTGATTTGCAGGATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
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| CDS-3UTR CCA 90 bp | AGATGTCAAGAATGGAACTCCATAGTCCTTGCAGGAAAAGACCTGATTCGAGATAAGTATGGCCACCGCTaGAAGGGCCCGGGGTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RCQEWNSIVLAGKDLIRDKYGHR*KGPGFL Trigger: GAGGAACCCCGGGCCCTTCCAGCGGTGGCCATACTT...ATCTCGAATCAGGTCTTTTCCTGCAAGGACTATGGAGTTCCATTCTTGACATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CCA 90 bp | GTCTTATATAGTTATTTTTGCATGTCCCCCGAGTTGACTTCGGATGGTTCTCCTAAGTATGGCCACCGCTaGAAGGGCCCGGGGTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VLYSYFCMSPELTSDGSPKYGHR*KGPGFL Trigger: GAGGAACCCCGGGCCCTTCCAGCGGTGGCCATACTT...AGGAGAACCATCCGAAGTCAACTCGGGGGACATGCAAAAATAACTATATAAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CCA 90 bp | GACCTTCCTGTCCCTTGCAGGATAACTGTAAGGCTTTTTAATGTAAGGAGGCTTCCACTGTGTGAAGTATaGCCACCGCTGGAAGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: DLPVPCRITVRLFNVRRLPLCEV*PPLEGP Trigger: GGGCCCTTCCAGCGGTGGCCATACTTCACACAGTGG...AAGCCTCCTTACATTAAAAAGCCTTACAGTTATCCTGCAAGGGACAGGAAGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CCA 90 bp | GCGTACCCCACTCAGTTAACCTTATATGCATGCCACCTTGCACTAATCTGCTACCATACTTTGCAGCCCTaGCGCTCTGATGCCCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: AYPTQLTLYACHLALICYHTLQP*RSDAHV Trigger: CACATGGGCATCAGAGCGCCAGGGCTGCAAAGTATG...GTAGCAGATTAGTGCAAGGTGGCATGCATATAAGGTTAACTGAGTGGGGTACGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185131.8 |
||
| 3UTR CAA 72 bp | CAGAGGGTGGACTTCTTTACCTGCCCTGACAGGGACTaGGGGAGGGTAACACTTCTGGAGTTAAACGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QRVDFFTCPDRD*GRVTLLELNVK Trigger: TTTCACGTTTAACTCCAGAAGTGTTACCCTCCCCAAGTCCCTGTCAGGGCAGGTAAAGAAGTCCACCCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
||
| 3UTR CAA 72 bp | AGCCCTCCTGGTGAATGGCTTGAGGATGCTTTTCGCTaGCCTGACTTGAATACAGTCACTAGAGGGGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPPGEWLEDAFR*PDLNTVTRGDL Trigger: CAAGTCCCCTCTAGTGACTGTATTCAAGTCAGGCAAGCGAAAAGCATCCTCAAGCCATTCACCAGGAGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177357.4 |
||
| CDS-3UTR TCA 90 bp | AAGCTACTGAGCGTGAATGTCCATGACTTGTGCACTCATTGTCGGGTCTCCTGTTCTTTAAAGCGTCATTaGCCGAGGAACCCATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KLLSVNVHDLCTHCRVSCSLKRH*PRNPCW Trigger: CCAGCATGGGTTCCTCGGTCAATGACGCTTTAAAGA...ACAGGAGACCCGACAATGAGTGCACAAGTCATGGACATTCACGCTCAGTAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| CDS-3UTR TCA 90 bp | ACTTGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGGCTTGAGGCTCCGCTATATCTTCATTaGATGACTCTGACGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TCALIVGSPVLRTEGLEAPLYLH*MTLTSR Trigger: TCTGCTCGTCAGAGTCATTCAATGAAGATATAGCGG...AGCCTCAAGCCCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| CDS-3UTR TCA 90 bp | CATGCATCATCACTGCGGGGTGGTGAGGGTGTCCAGGAATGTACGTATGCATGGATGCCACGCTTTTTGTaGCGCTTTTTGTCCTTATCA | + |
|
Preference number: 4 (lower is better) Translates to: HASSLRGGEGVQECTYAWMPRFL*RFLSLS Trigger: TGATAAGGACAAAAAGCGTCACAAAAAGCGTGGCAT...CCATGCATACGTACATTCCTGGACACCCTCACCACCCCGCAGTGATGATGCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| CDS-3UTR TCA 90 bp | TCAAGAATGGAACTCCATAGTCCTTGCAGGAAAAGACCTGATTCGAGATCAGTCATCACTGCGGGGTGGTaGGGGTGTCCAGGAATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SRMELHSPCRKRPDSRSVITAGW*GCPGMY Trigger: GTACATTCCTGGACACCCTCACCACCCCGCAGTGAT...GACTGATCTCGAATCAGGTCTTTTCCTGCAAGGACTATGGAGTTCCATTCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000185131.8 |
||
| CDS-3UTR GCA 90 bp | TGGAACTCCATAGTCCTTGCAGGAAAAGACCTGATTCGAGATCAGTCACCATTGACATCGTGGAGGGGATaGCTACTCCATCCATACCCC | + |
|
Preference number: 4 (lower is better) Translates to: WNSIVLAGKDLIRDQSPLTSWRG*LLHPYP Trigger: GGGGTATGGATGGAGTAGGCATCCCCTCCACGATGT...CAATGGTGACTGATCTCGAATCAGGTCTTTTCCTGCAAGGACTATGGAGTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR GCA 90 bp | AATGTCCATGACTTGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGTCCAAGCCATCACCTTaGTCACTGCTGTTATCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NVHDLCTHCRVSCVKNRGSKPSP*SLLLSP Trigger: TGGGGATAACAGCAGTGAGCAAGGTGATGGCTTGGA...CCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACAAGTCATGGACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| CDS-3UTR CCA 90 bp | TCGAGATCAGTCACCATTGTAGACAACGCATATTCCCTTAAGCTACTGAGCGTGGGTCCCCATACATCGTaGAGGGGATGCCTACTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SRSVTIVDNAYSLKLLSVGPHTS*RGCLLH Trigger: ATGGAGTAGGCATCCCCTCCACGATGTATGGGGACC...CACGCTCAGTAGCTTAAGGGAATATGCGTTGTCTACAATGGTGACTGATCTCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| CDS-3UTR CCA 90 bp | AATGTCCATGACTTGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGGATGCCGTGTCATCATaGTCTCTATTCCAAGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NVHDLCTHCRVSCVKNRGDAVSS*SLFQEG Trigger: GCCCTCTTGGAATAGAGACCATGATGACACGGCATC...CCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACAAGTCATGGACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| CDS-3UTR CCA 90 bp | TTGCATGTCCCCCGAGTTGACTTCGGATGGTTCTCCTGCATTTTAAGAGTCCCTTTCCTCCTGAACGAGTaGATGCCGTGTCATCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LHVPRVDFGWFSCILRVPFLLNE*MPCHHG Trigger: ACCATGATGACACGGCATCCACTCGTTCAGGAGGAA...AGGGACTCTTAAAATGCAGGAGAACCATCCGAAGTCAACTCGGGGGACATGCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CCA 90 bp | TGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGGCTTGAGGCTGACTATTGGTGGCTACTTTaGGAAAGATGCCACGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CALIVGSPVLRTEGLEADYWWLL*ERCHAF Trigger: AAAAGCGTGGCATCTTTCCCAAAGTAGCCACCAATA...GTCAGCCTCAAGCCCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTTTGGGTTTCCATGCCTCCTCCTACCAGTCTCCTTAAGACACTGCCTGCATATTGGTGGCTACTTTaGGAAAGATGCCACGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GLWVSMPPPTSLLKTLPAYWWLL*ERCHAF Trigger: AAAAGCGTGGCATCTTTCCCAAAGTAGCCACCAATA...TGCAGGCAGTGTCTTAAGGAGACTGGTAGGAGGAGGCATGGAAACCCAAAGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CCA 90 bp | TGGAACTCCATAGTCCTTGCAGGAAAAGACCTGATTCGAGATCAGTCACCATTGCATACTCACACCCATTaGGCCACCCCGGGCTACATA | + |
|
Preference number: 4 (lower is better) Translates to: WNSIVLAGKDLIRDQSPLHTHTH*ATPGYI Trigger: TATGTAGCCCGGGGTGGCCCAATGGGTGTGAGTATG...CAATGGTGACTGATCTCGAATCAGGTCTTTTCCTGCAAGGACTATGGAGTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185131.8 |
||
| 3UTR CAA 72 bp | CATGCATCAACTGCGGTTAGACAGATTTATGGCACTTaGGGGACATGCTCTTTCCTCTCCTTGCACTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HASTAVRQIYGT*GTCSFLSLHCC Trigger: GCAGCAGTGCAAGGAGAGGAAAGAGCATGTCCCCAAAGTGCCATAAATCTGTCTAACCGCAGTTGATGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
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| CDS-3UTR TCA 90 bp | ATCTGGGACAGTTTTCCTAGGCTCACTGCACTAGGCCTGCCACTGAAGATTGCACCGCTATATCTTCATTaGATGACTCTGACGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IWDSFPRLTALGLPLKIAPLYLH*MTLTSR Trigger: TCTGCTCGTCAGAGTCATTCAATGAAGATATAGCGG...TGCAATCTTCAGTGGCAGGCCTAGTGCAGTGAGCCTAGGAAAACTGTCCCAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| CDS-3UTR TCA 90 bp | CTTCTAAACACACACGGCCTTTGGGTTTCCATGCCTCCTCCTACCAGTCTCCTTCCGCTATATCTTCATTaGATGACTCTGACGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLNTHGLWVSMPPPTSLLPLYLH*MTLTSR Trigger: TCTGCTCGTCAGAGTCATTCAATGAAGATATAGCGG...AAGGAGACTGGTAGGAGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR TCA 90 bp | ACACACGGCCTTTGGGTTTCCATGCCTCCTCCTACCAGTCTCCTTAAGACACTGATGCCACGCTTTTTGTaGCGCTTTTTGTCCTTATCA | + |
|
Preference number: 4 (lower is better) Translates to: THGLWVSMPPPTSLLKTLMPRFL*RFLSLS Trigger: TGATAAGGACAAAAAGCGTCACAAAAAGCGTGGCAT...CAGTGTCTTAAGGAGACTGGTAGGAGGAGGCATGGAAACCCAAAGGCCGTGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
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| CDS-3UTR TCA 90 bp | TGGAACTCCATAGTCCTTGCAGGAAAAGACCTGATTCGAGATCAGTCACCATTGACAGCCACGCCCTCATaGTATTGGTGGCTACTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: WNSIVLAGKDLIRDQSPLTATPS*YWWLLW Trigger: CCAAAGTAGCCACCAATATCATGAGGGCGTGGCTGT...CAATGGTGACTGATCTCGAATCAGGTCTTTTCCTGCAAGGACTATGGAGTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR GCA 90 bp | TCAAGAATGGAACTCCATAGTCCTTGCAGGAAAAGACCTGATTCGAGATCAGTCTTGCATGGACCTGGCTaGATGCGGGTCCCCATACAT | + |
|
Preference number: 4 (lower is better) Translates to: SRMELHSPCRKRPDSRSVLHGPG*MRVPIH Trigger: ATGTATGGGGACCCGCATGCAGCCAGGTCCATGCAA...GACTGATCTCGAATCAGGTCTTTTCCTGCAAGGACTATGGAGTTCCATTCTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR GCA 90 bp | TGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGGCTTGAGGCTGACAAGTCCTGTATCTTGTaGCAACTGCTTTTTCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CALIVGSPVLRTEGLEADKSCIL*QLLFLF Trigger: GAACAGAAAAAGCAGTTGGCACAAGATACAGGACTT...GTCAGCCTCAAGCCCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| CDS-3UTR GCA 90 bp | CATGCATCATCACTGCGGGGTGGTGAGGGTGTCCAGGAATGTACGTATGCATGGAAGTCCTGTATCTTGTaGCAACTGCTTTTTCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HASSLRGGEGVQECTYAWKSCIL*QLLFLF Trigger: GAACAGAAAAAGCAGTTGGCACAAGATACAGGACTT...CCATGCATACGTACATTCCTGGACACCCTCACCACCCCGCAGTGATGATGCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
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| CDS-3UTR CCA 90 bp | TGCAAATCAGACCTTCCTGTCCCTTGCAGGATAACTGTAAGGCTTTTTAATGTACCGTGGTTCAGGTGGTaGACCGGTTGCATGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: CKSDLPVPCRITVRLFNVPWFRW*TGCMDL Trigger: CAGGTCCATGCAACCGGTCCACCACCTGAACCACGG...TACATTAAAAAGCCTTACAGTTATCCTGCAAGGGACAGGAAGGTCTGATTTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
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| CDS-3UTR CCA 90 bp | CAATGTCTACATAAATGCTCCAAGGTGGGACTATGGAAAAATACACACATGACCCCGTGGTTCAGGTGGTaGACCGGTTGCATGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: QCLHKCSKVGLWKNTHMTPWFRW*TGCMDL Trigger: CAGGTCCATGCAACCGGTCCACCACCTGAACCACGG...GGTCATGTGTGTATTTTTCCATAGTCCCACCTTGGAGCATTTATGTAGACATTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
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| CDS-3UTR CCA 90 bp | AGTTTTTCCCATCCTTCCCGATTTACATCTGTTCAGGCCAATTCAAATATGGTGCCATGCTGGGGGCCATaGCGTTGGTGTGAGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SFSHPSRFTSVQANSNMVPCWGP*RWCELC Trigger: ACACAGCTCACACCAACGCCATGGCCCCCAGCATGG...CACCATATTTGAATTGGCCTGAACAGATGTAAATCGGGAAGGATGGGAAAAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
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| CDS-3UTR CCA 90 bp | AGAGATGCTGTTAAGGGCAATTTAGGAAATGAACTAGGGCTTTGGAGTTCAAAACCGAGGAACCCATGCTaGGGGCCATGGCGTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RDAVKGNLGNELGLWSSKPRNPC*GPWRWC Trigger: ACACCAACGCCATGGCCCCCAGCATGGGTTCCTCGG...TTTTGAACTCCAAAGCCCTAGTTCATTTCCTAAATTGCCCTTAACAGCATCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
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| CDS-3UTR CCA 90 bp | GCAAATTCAAGCCCCAGGCTAGAAAGAGGGAGAGGGAGGAGAAGAGAGAGAGAGCTATTCCAAGAGGGCTaGTCAGTTAGATTTGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: ANSSPRLERGRGRRRERELFQEG*SVRFAD Trigger: ATCAGCAAATCTAACTGACCAGCCCTCTTGGAATAG...CTCTCTCTCTCTTCTCCTCCCTCTCCCTCTTTCTAGCCTGGGGCTTGAATTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
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| CDS-3UTR CCA 90 bp | ACTTGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGGCTTGAGGCTCTATTCCAAGAGGGCTaGTCAGTTAGATTTGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: TCALIVGSPVLRTEGLEALFQEG*SVRFAD Trigger: ATCAGCAAATCTAACTGACCAGCCCTCTTGGAATAG...AGCCTCAAGCCCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
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| CDS-3UTR CCA 90 bp | GACCTTCCTGTCCCTTGCAGGATAACTGTAAGGCTTTTTAATGTAAGGAGGCTTGGGTGTGTTAGATGCTaGAACAGCCACGCCCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: DLPVPCRITVRLFNVRRLGCVRC*NSHALM Trigger: CATGAGGGCGTGGCTGTTCCAGCATCTAACACACCC...AAGCCTCCTTACATTAAAAAGCCTTACAGTTATCCTGCAAGGGACAGGAAGGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
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| CDS-3UTR CCA 90 bp | TCAAGAATGGAACTCCATAGTCCTTGCAGGAAAAGACCTGATTCGAGATCAGTCGGGTGTGTTAGATGCTaGAACAGCCACGCCCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: SRMELHSPCRKRPDSRSVGCVRC*NSHALM Trigger: CATGAGGGCGTGGCTGTTCCAGCATCTAACACACCC...GACTGATCTCGAATCAGGTCTTTTCCTGCAAGGACTATGGAGTTCCATTCTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
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| CDS-3UTR CCA 90 bp | GCAAATTCAAGCCCCAGGCTAGAAAGAGGGAGAGGGAGGAGAAGAGAGAGAGAGTACAAAACCTCCCATTaGCTGTCCATCAGGGTTATA | + |
|
Preference number: 4 (lower is better) Translates to: ANSSPRLERGRGRRREREYKTSH*LSIRVI Trigger: TATAACCCTGATGGACAGCCAATGGGAGGTTTTGTA...CTCTCTCTCTCTTCTCCTCCCTCTCCCTCTTTCTAGCCTGGGGCTTGAATTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068264.14 ENSMUST00000177417.8 ENSMUST00000185131.8 |
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| CDS-3UTR TCA 90 bp | GATGTGACAGTTAGGCTTCTAAACACACACGGCCTTTGGGTTTCCATGCCTCCTCCGCTATATCTTCATTaGATGACTCTGACGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: DVTVRLLNTHGLWVSMPPPLYLH*MTLTSR Trigger: TCTGCTCGTCAGAGTCATTCAATGAAGATATAGCGG...AGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAGCCTAACTGTCACATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
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| CDS-3UTR TCA 90 bp | TGGAACTCCATAGTCCTTGCAGGAAAAGACCTGATTCGAGATCAGTCACCATTGATGCCCATGTGCTGCTaGCCGTCCATTACAAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: WNSIVLAGKDLIRDQSPLMPMCC*PSITKP Trigger: AGGTTTTGTAATGGACGGTCAGCAGCACATGGGCAT...CAATGGTGACTGATCTCGAATCAGGTCTTTTCCTGCAAGGACTATGGAGTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068264.14 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR GCA 90 bp | ATGTCAAGAATGGAACTCCATAGTCCTTGCAGGAAAAGACCTGATTCGAGATCATTGCATGGACCTGGCTaGATGCGGGTCCCCATACAT | + |
|
Preference number: 4 (lower is better) Translates to: MSRMELHSPCRKRPDSRSLHGPG*MRVPIH Trigger: ATGTATGGGGACCCGCATGCAGCCAGGTCCATGCAA...TGATCTCGAATCAGGTCTTTTCCTGCAAGGACTATGGAGTTCCATTCTTGACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR GCA 90 bp | AAGCTACTGAGCGTGAATGTCCATGACTTGTGCACTCATTGTCGGGTCTCCTGTCTACTTTGGGAAAGATaGCACGCTTTTTGTGACGCT | + |
|
Preference number: 4 (lower is better) Translates to: KLLSVNVHDLCTHCRVSCLLWER*HAFCDA Trigger: AGCGTCACAAAAAGCGTGGCATCTTTCCCAAAGTAG...ACAGGAGACCCGACAATGAGTGCACAAGTCATGGACATTCACGCTCAGTAGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| CDS-3UTR GCA 90 bp | TCAGACCTTCCTGTCCCTTGCAGGATAACTGTAAGGCTTTTTAATGTAAGGAGGCCTTGGCTGATTGCCTaGTCGGTTGGACTGGTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: SDLPVPCRITVRLFNVRRPWLIA*SVGLVY Trigger: ATAGACCAGTCCAACCGAGCAGGCAATCAGCCAAGG...CCTCCTTACATTAAAAAGCCTTACAGTTATCCTGCAAGGGACAGGAAGGTCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102878.11 |
||
| CDS-3UTR CCA 90 bp | GTCTTATATAGTTATTTTTGCATGTCCCCCGAGTTGACTTCGGATGGTTCTCCTGGTCCCCATACATCGTaGAGGGGATGCCTACTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VLYSYFCMSPELTSDGSPGPHTS*RGCLLH Trigger: ATGGAGTAGGCATCCCCTCCACGATGTATGGGGACC...AGGAGAACCATCCGAAGTCAACTCGGGGGACATGCAAAAATAACTATATAAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CCA 90 bp | CATGCTCTTTCCTCTCCTTGCACTGCTGCAGACTGCTTACATTTTGCAAATCAGGATGCCGTGTCATCATaGTCTCTATTCCAAGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HALSSPCTAADCLHFANQDAVSS*SLFQEG Trigger: GCCCTCTTGGAATAGAGACCATGATGACACGGCATC...CTGATTTGCAAAATGTAAGCAGTCTGCAGCAGTGCAAGGAGAGGAAAGAGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| CDS-3UTR CCA 90 bp | TCCACAACAAAAAGTATAATTAGCGTACCCCACTCAGTTAACCTTATATGCATGAAGTATGGCCACCGCTaGAAGGGCCCGGGGTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: STTKSIISVPHSVNLICMKYGHR*KGPGFL Trigger: GAGGAACCCCGGGCCCTTCCAGCGGTGGCCATACTT...CATGCATATAAGGTTAACTGAGTGGGGTACGCTAATTATACTTTTTGTTGTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CCA 90 bp | ATGTCAAGAATGGAACTCCATAGTCCTTGCAGGAAAAGACCTGATTCGAGATCAGGGTGTGTTAGATGCTaGAACAGCCACGCCCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: MSRMELHSPCRKRPDSRSGCVRC*NSHALM Trigger: CATGAGGGCGTGGCTGTTCCAGCATCTAACACACCC...TGATCTCGAATCAGGTCTTTTCCTGCAAGGACTATGGAGTTCCATTCTTGACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CCA 90 bp | GTCTTATATAGTTATTTTTGCATGTCCCCCGAGTTGACTTCGGATGGTTCTCCTGGCTACATACTCCCCTaGCATACTTTGCAGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLYSYFCMSPELTSDGSPGYILP*HTLQPW Trigger: CCAGGGCTGCAAAGTATGCCAGGGGAGTATGTAGCC...AGGAGAACCATCCGAAGTCAACTCGGGGGACATGCAAAAATAACTATATAAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000185131.8 |
||
| CDS-3UTR CCA 90 bp | AGATGTCAAGAATGGAACTCCATAGTCCTTGCAGGAAAAGACCTGATTCGAGATGAATGTACGTATGCATaGGGGGCCCATGACGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RCQEWNSIVLAGKDLIRDECTYA*GAHDAA Trigger: AGCTGCGTCATGGGCCCCCCATGCATACGTACATTC...ATCTCGAATCAGGTCTTTTCCTGCAAGGACTATGGAGTTCCATTCTTGACATCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000185131.8 |
||
| CDS-3UTR TCA 90 bp | GATGTGACAGTTAGGCTTCTAAACACACACGGCCTTTGGGTTTCCATGCCTCCTATGCCACGCTTTTTGTaGCGCTTTTTGTCCTTATCA | + |
|
Preference number: 4 (lower is better) Translates to: DVTVRLLNTHGLWVSMPPMPRFL*RFLSLS Trigger: TGATAAGGACAAAAAGCGTCACAAAAAGCGTGGCAT...AGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAGCCTAACTGTCACATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR TCA 90 bp | AGATCAGTCACCATTGTAGACAACGCATATTCCCTTAAGCTACTGAGCGTGAATACAGCCACGCCCTCATaGTATTGGTGGCTACTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RSVTIVDNAYSLKLLSVNTATPS*YWWLLW Trigger: CCAAAGTAGCCACCAATATCATGAGGGCGTGGCTGT...ATTCACGCTCAGTAGCTTAAGGGAATATGCGTTGTCTACAATGGTGACTGATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| CDS-3UTR TCA 90 bp | AGATGTCAAGAATGGAACTCCATAGTCCTTGCAGGAAAAGACCTGATTCGAGATACAGCCACGCCCTCATaGTATTGGTGGCTACTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RCQEWNSIVLAGKDLIRDTATPS*YWWLLW Trigger: CCAAAGTAGCCACCAATATCATGAGGGCGTGGCTGT...ATCTCGAATCAGGTCTTTTCCTGCAAGGACTATGGAGTTCCATTCTTGACATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR TCA 90 bp | GACCTTCCTGTCCCTTGCAGGATAACTGTAAGGCTTTTTAATGTAAGGAGGCTTATGCCCATGTGCTGCTaGCCGTCCATTACAAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: DLPVPCRITVRLFNVRRLMPMCC*PSITKP Trigger: AGGTTTTGTAATGGACGGTCAGCAGCACATGGGCAT...AAGCCTCCTTACATTAAAAAGCCTTACAGTTATCCTGCAAGGGACAGGAAGGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068264.14 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR GCA 90 bp | TCAGACCTTCCTGTCCCTTGCAGGATAACTGTAAGGCTTTTTAATGTAAGGAGGCATCACCTTGCTCACTaGTGTTATCCCCACTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SDLPVPCRITVRLFNVRRHHLAH*CYPHCV Trigger: CACACAGTGGGGATAACAGCAGTGAGCAAGGTGATG...CCTCCTTACATTAAAAAGCCTTACAGTTATCCTGCAAGGGACAGGAAGGTCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR GCA 90 bp | TCAAGAATGGAACTCCATAGTCCTTGCAGGAAAAGACCTGATTCGAGATCAGTCTCCAAGCCATCACCTTaGTCACTGCTGTTATCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRMELHSPCRKRPDSRSVSKPSP*SLLLSP Trigger: TGGGGATAACAGCAGTGAGCAAGGTGATGGCTTGGA...GACTGATCTCGAATCAGGTCTTTTCCTGCAAGGACTATGGAGTTCCATTCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTGACCGTCCATTACAAAACCTCCCATTGGCTGTCCATCAGGGTTATAAGGCTATTCCAAGAGGGCTaGTCAGTTAGATTTGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLTVHYKTSHWLSIRVIRLFQEG*SVRFAD Trigger: ATCAGCAAATCTAACTGACCAGCCCTCTTGGAATAG...CCTTATAACCCTGATGGACAGCCAATGGGAGGTTTTGTAATGGACGGTCAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177357.4 |
||
| CDS-3UTR CCA 90 bp | GATTCGAGATCAGTCACCATTGTAGACAACGCATATTCCCTTAAGCTACTGAGCTTCCTCCTGAACGAGTaGATGCCGTGTCATCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: DSRSVTIVDNAYSLKLLSFLLNE*MPCHHG Trigger: ACCATGATGACACGGCATCCACTCGTTCAGGAGGAA...GCTCAGTAGCTTAAGGGAATATGCGTTGTCTACAATGGTGACTGATCTCGAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| CDS-3UTR TCA 90 bp | GTCTTATATAGTTATTTTTGCATGTCCCCCGAGTTGACTTCGGATGGTTCTCCTTCTTTAAAGCGTCATTaGCCGAGGAACCCATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLYSYFCMSPELTSDGSPSLKRH*PRNPCW Trigger: CCAGCATGGGTTCCTCGGTCAATGACGCTTTAAAGA...AGGAGAACCATCCGAAGTCAACTCGGGGGACATGCAAAAATAACTATATAAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR TCA 90 bp | CAATGTCTACATAAATGCTCCAAGGTGGGACTATGGAAAAATACACACATGACCACAGCCACGCCCTCATaGTATTGGTGGCTACTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QCLHKCSKVGLWKNTHMTTATPS*YWWLLW Trigger: CCAAAGTAGCCACCAATATCATGAGGGCGTGGCTGT...GGTCATGTGTGTATTTTTCCATAGTCCCACCTTGGAGCATTTATGTAGACATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR TCA 90 bp | AAAATCCTGCAAATCAGACCTTCCTGTCCCTTGCAGGATAACTGTAAGGCTTTTGAGCGTGAATGTCCATaGCTTGTGCACTCATTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: KILQIRPSCPLQDNCKAFERECP*LVHSLS Trigger: CGACAATGAGTGCACAAGTCATGGACATTCACGCTC...AAAAGCCTTACAGTTATCCTGCAAGGGACAGGAAGGTCTGATTTGCAGGATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185131.8 |
||
| CDS-3UTR GCA 90 bp | AGATCAGTCACCATTGTAGACAACGCATATTCCCTTAAGCTACTGAGCGTGAATCATCACCTTGCTCACTaGTGTTATCCCCACTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RSVTIVDNAYSLKLLSVNHHLAH*CYPHCV Trigger: CACACAGTGGGGATAACAGCAGTGAGCAAGGTGATG...ATTCACGCTCAGTAGCTTAAGGGAATATGCGTTGTCTACAATGGTGACTGATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| CDS-3UTR GCA 90 bp | GAATGGAACTCCATAGTCCTTGCAGGAAAAGACCTGATTCGAGATCAGTCACCACTACTTTGGGAAAGATaGCACGCTTTTTGTGACGCT | + |
|
Preference number: 4 (lower is better) Translates to: EWNSIVLAGKDLIRDQSPLLWER*HAFCDA Trigger: AGCGTCACAAAAAGCGTGGCATCTTTCCCAAAGTAG...TGGTGACTGATCTCGAATCAGGTCTTTTCCTGCAAGGACTATGGAGTTCCATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CCA 90 bp | AGATCAGTCACCATTGTAGACAACGCATATTCCCTTAAGCTACTGAGCGTGAATTTCCTCCTGAACGAGTaGATGCCGTGTCATCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: RSVTIVDNAYSLKLLSVNFLLNE*MPCHHG Trigger: ACCATGATGACACGGCATCCACTCGTTCAGGAGGAA...ATTCACGCTCAGTAGCTTAAGGGAATATGCGTTGTCTACAATGGTGACTGATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| 3UTR CAA 72 bp | TATTCCCTTAAGCTACTGAGCGTGAATGTCCATGACTaGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: YSLKLLSVNVHD*CTHCRVSCVKN Trigger: GTTCTTAACACAGGAGACCCGACAATGAGTGCACAAGTCATGGACATTCACGCTCAGTAGCTTAAGGGAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| 3UTR CAA 72 bp | TCCCATTGGCTGTCCATCAGGGTTATAAGGTGTCCCTaGGCTGACTACAAAAGTACACAGCACAACTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: SHWLSIRVIRCP*ADYKSTQHNFL Trigger: TAAGAAGTTGTGCTGTGTACTTTTGTAGTCAGCCAAGGGACACCTTATAACCCTGATGGACAGCCAATGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
||
| CDS-3UTR TCA 90 bp | AGTTTTTCCCATCCTTCCCGATTTACATCTGTTCAGGCCAATTCAAATATGGTGATGCCCATGTGCTGCTaGCCGTCCATTACAAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: SFSHPSRFTSVQANSNMVMPMCC*PSITKP Trigger: AGGTTTTGTAATGGACGGTCAGCAGCACATGGGCAT...CACCATATTTGAATTGGCCTGAACAGATGTAAATCGGGAAGGATGGGAAAAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068264.14 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR GCA 90 bp | TGCAAATCAGACCTTCCTGTCCCTTGCAGGATAACTGTAAGGCTTTTTAATGTACATCACCTTGCTCACTaGTGTTATCCCCACTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CKSDLPVPCRITVRLFNVHHLAH*CYPHCV Trigger: CACACAGTGGGGATAACAGCAGTGAGCAAGGTGATG...TACATTAAAAAGCCTTACAGTTATCCTGCAAGGGACAGGAAGGTCTGATTTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CCA 90 bp | AGCGTACCCCACTCAGTTAACCTTATATGCATGCCACCTTGCACTAATCTGCTACTATTCCAAGAGGGCTaGTCAGTTAGATTTGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SVPHSVNLICMPPCTNLLLFQEG*SVRFAD Trigger: ATCAGCAAATCTAACTGACCAGCCCTCTTGGAATAG...TAGCAGATTAGTGCAAGGTGGCATGCATATAAGGTTAACTGAGTGGGGTACGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CCA 90 bp | AGTTTTTCCCATCCTTCCCGATTTACATCTGTTCAGGCCAATTCAAATATGGTGTTCCTCCTGAACGAGTaGATGCCGTGTCATCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: SFSHPSRFTSVQANSNMVFLLNE*MPCHHG Trigger: ACCATGATGACACGGCATCCACTCGTTCAGGAGGAA...CACCATATTTGAATTGGCCTGAACAGATGTAAATCGGGAAGGATGGGAAAAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR GCA 90 bp | GAATGGAACTCCATAGTCCTTGCAGGAAAAGACCTGATTCGAGATCAGTCACCAAAGTCCTGTATCTTGTaGCAACTGCTTTTTCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: EWNSIVLAGKDLIRDQSPKSCIL*QLLFLF Trigger: GAACAGAAAAAGCAGTTGGCACAAGATACAGGACTT...TGGTGACTGATCTCGAATCAGGTCTTTTCCTGCAAGGACTATGGAGTTCCATTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CCA 90 bp | GATTCGAGATCAGTCACCATTGTAGACAACGCATATTCCCTTAAGCTACTGAGCCTATTCCAAGAGGGCTaGTCAGTTAGATTTGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: DSRSVTIVDNAYSLKLLSLFQEG*SVRFAD Trigger: ATCAGCAAATCTAACTGACCAGCCCTCTTGGAATAG...GCTCAGTAGCTTAAGGGAATATGCGTTGTCTACAATGGTGACTGATCTCGAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| 3UTR CAA 72 bp | TGCAGCATCACCCCAGGTATAATTTGGTCGCTGCCTTaGCTACCATGTTATAATACAAAACAAATCCTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CSITPGIIWSLP*LPCYNTKQILG Trigger: CCCTAGGATTTGTTTTGTATTATAACATGGTAGCAAAGGCAGCGACCAAATTATACCTGGGGTGATGCTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
||
| 3UTR CAA 72 bp | CTCCCACCCACAGAAGAAGACCAGCATGTGTTACCCTaGGCCTCAGCAAGAATTTTAAATAGTGTGTTAATA | + |
|
Preference number: 4 (lower is better) Translates to: LPPTEEDQHVLP*ASARILNSVLI Trigger: TATTAACACACTATTTAAAATTCTTGCTGAGGCCAAGGGTAACACATGCTGGTCTTCTTCTGTGGGTGGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGTGAATTGTTAAACTTATATTGGACTCCCACCCACAGAAGAAGACCAGCACTATTCCAAGAGGGCTaGTCAGTTAGATTTGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: QSELLNLYWTPTHRRRPALFQEG*SVRFAD Trigger: ATCAGCAAATCTAACTGACCAGCCCTCTTGGAATAG...TGCTGGTCTTCTTCTGTGGGTGGGAGTCCAATATAAGTTTAACAATTCACTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| CDS-3UTR GCA 90 bp | GTCTTATATAGTTATTTTTGCATGTCCCCCGAGTTGACTTCGGATGGTTCTCCTAAGTCCTGTATCTTGTaGCAACTGCTTTTTCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VLYSYFCMSPELTSDGSPKSCIL*QLLFLF Trigger: GAACAGAAAAAGCAGTTGGCACAAGATACAGGACTT...AGGAGAACCATCCGAAGTCAACTCGGGGGACATGCAAAAATAACTATATAAGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CCA 90 bp | AGTTTTTCCCATCCTTCCCGATTTACATCTGTTCAGGCCAATTCAAATATGGTGTACAAAACCTCCCATTaGCTGTCCATCAGGGTTATA | + |
|
Preference number: 4 (lower is better) Translates to: SFSHPSRFTSVQANSNMVYKTSH*LSIRVI Trigger: TATAACCCTGATGGACAGCCAATGGGAGGTTTTGTA...CACCATATTTGAATTGGCCTGAACAGATGTAAATCGGGAAGGATGGGAAAAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068264.14 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR TCA 90 bp | AGAGATGCTGTTAAGGGCAATTTAGGAAATGAACTAGGGCTTTGGAGTTCAAAAATGCCACGCTTTTTGTaGCGCTTTTTGTCCTTATCA | + |
|
Preference number: 4 (lower is better) Translates to: RDAVKGNLGNELGLWSSKMPRFL*RFLSLS Trigger: TGATAAGGACAAAAAGCGTCACAAAAAGCGTGGCAT...TTTTGAACTCCAAAGCCCTAGTTCATTTCCTAAATTGCCCTTAACAGCATCTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| CDS-3UTR CAA 90 bp | GGTATAACTCGGCTGTCCCATACTCACACCCATTGGGCCACCCCGGGCTACATACAGGTGGTGGACCGGTaGCATGGACCTGGCTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: GITRLSHTHTHWATPGYIQVVDR*HGPGCM Trigger: CATGCAGCCAGGTCCATGCAACCGGTCCACCACCTG...TATGTAGCCCGGGGTGGCCCAATGGGTGTGAGTATGGGACAGCCGAGTTATACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| CDS-3UTR CAA 90 bp | TCGGCTGTCCCATACTCACACCCATTGGGCCACCCCGGGCTACATACTCCCCTGGTCCAAGCCATCACCTaGCTCACTGCTGTTATCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SAVPYSHPLGHPGLHTPLVQAIT*LTAVIP Trigger: GGGGATAACAGCAGTGAGCAAGGTGATGGCTTGGAC...CAGGGGAGTATGTAGCCCGGGGTGGCCCAATGGGTGTGAGTATGGGACAGCCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| CDS CCA 90 bp | AAGTATGGCCACCGCTGGAAGGGCCCGGGGTTCCTCCTGAACGAGTaGATGCCGTGTCATCATGGTCTCTATTCCAAGAGGGCTGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: KYGHRWKGPGFLLNE*MPCHHGLYSKRAGQ Trigger: CTGACCAGCCCTCTTGGAATAGAGACCATGATGACACGGCATCCACTCGTTCAGGAGGAACCCCGGGCCCTTCCAGCGGTGGCCATACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CAA 90 bp | ACTTGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGGCTTGAGGCTCAGGTGGTGGACCGGTaGCATGGACCTGGCTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: TCALIVGSPVLRTEGLEAQVVDR*HGPGCM Trigger: CATGCAGCCAGGTCCATGCAACCGGTCCACCACCTG...AGCCTCAAGCCCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| CDS-3UTR CAA 90 bp | GCAAATTCAAGCCCCAGGCTAGAAAGAGGGAGAGGGAGGAGAAGAGAGAGAGAGCCATACTCACACCCATaGGGCCACCCCGGGCTACAT | + |
|
Preference number: 5 (lower is better) Translates to: ANSSPRLERGRGRRREREPYSHP*GHPGLH Trigger: ATGTAGCCCGGGGTGGCCCAATGGGTGTGAGTATGG...CTCTCTCTCTCTTCTCCTCCCTCTCCCTCTTTCTAGCCTGGGGCTTGAATTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185131.8 |
||
| CDS-3UTR CAA 90 bp | AATGTCCATGACTTGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGCAGGTGGTGGACCGGTaGCATGGACCTGGCTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: NVHDLCTHCRVSCVKNRGQVVDR*HGPGCM Trigger: CATGCAGCCAGGTCCATGCAACCGGTCCACCACCTG...CCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACAAGTCATGGACATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| CDS-3UTR CAA 90 bp | ACTTGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGGCTTGAGGCTTGGCTGACTGCTCGGTaGGACTGGTCTATCATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TCALIVGSPVLRTEGLEAWLTAR*DWSIMG Trigger: GCCCATGATAGACCAGTCCAACCGAGCAGTCAGCCA...AGCCTCAAGCCCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068264.14 ENSMUST00000177417.8 |
||
| CDS TCA 90 bp | CCCATTCCACTCATAGGTCCTGGCGCTCTGATGCCCATGTGCTGCTaGCCGTCCATTACAAAACCTCCCATTGGCTGTCCATCAGGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: PIPLIGPGALMPMCC*PSITKPPIGCPSGL Trigger: TAACCCTGATGGACAGCCAATGGGAGGTTTTGTAATGGACGGTCAGCAGCACATGGGCATCAGAGCGCCAGGACCTATGAGTGGAATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068264.14 |
||
| CDS-3UTR CAA 90 bp | AGAGAGAGAGAGCGCACGCACATGGCTGAAATCCTAGGCAAGAAGAAAGATTCTCAGGTGGTGGACCGGTaGCATGGACCTGGCTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: RERERTHMAEILGKKKDSQVVDR*HGPGCM Trigger: CATGCAGCCAGGTCCATGCAACCGGTCCACCACCTG...AGAATCTTTCTTCTTGCCTAGGATTTCAGCCATGTGCGTGCGCTCTCTCTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CAA 90 bp | GTGGGGCTGTCCTCCATGCATCATCACTGCGGGGTGGTGAGGGTGTCCAGGAATACCGCTATATCTTCATaGAATGACTCTGACGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VGLSSMHHHCGVVRVSRNTAISS*NDSDEQ Trigger: CTGCTCGTCAGAGTCATTCAATGAAGATATAGCGGT...ATTCCTGGACACCCTCACCACCCCGCAGTGATGATGCATGGAGGACAGCCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| CDS-3UTR CAA 90 bp | CTGAGCGTGAATGTCCATGACTTGTGCACTCATTGTCGGGTCTCCTGTGTTAAGGTCACTAGAGGGGACTaGCCTGCTCGGTTGGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSVNVHDLCTHCRVSCVKVTRGD*PARLDW Trigger: CCAGTCCAACCGAGCAGGCAAGTCCCCTCTAGTGAC...CTTAACACAGGAGACCCGACAATGAGTGCACAAGTCATGGACATTCACGCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
||
| CDS-3UTR CAA 90 bp | AATGTCCATGACTTGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGCAGGTGGTGGACCGGTaGCATGGACCTGGCTGCATN | + |
|
Preference number: 5 (lower is better) Translates to: NVHDLCTHCRVSCVKNRGQVVDR*HGPGCX Trigger: NATGCAGCCAGGTCCATGCAACCGGTCCACCACCTG...CCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACAAGTCATGGACATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177357.4 |
||
| CDS CCA 90 bp | TCTGATGCCCATGTGCTGCTGACCGTCCATTACAAAACCTCCCATTaGCTGTCCATCAGGGTTATAAGGTGTCCCTTGGCTGACTGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SDAHVLLTVHYKTSH*LSIRVIRCPLADCS Trigger: CGAGCAGTCAGCCAAGGGACACCTTATAACCCTGATGGACAGCCAATGGGAGGTTTTGTAATGGACGGTCAGCAGCACATGGGCATCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068264.14 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CAA 90 bp | TGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGGCTTGAGGCTGACCTCTTTAAAGCGTCATaGACCGAGGAACCCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CALIVGSPVLRTEGLEADLFKAS*TEEPML Trigger: CAGCATGGGTTCCTCGGTCAATGACGCTTTAAAGAG...GTCAGCCTCAAGCCCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| CDS-3UTR CAA 90 bp | TCGGCTGTCCCATACTCACACCCATTGGGCCACCCCGGGCTACATACTCCCCTGGCTGGTCAGTTAGATTaGCTGATCTTGTTACATCTT | + |
|
Preference number: 5 (lower is better) Translates to: SAVPYSHPLGHPGLHTPLAGQLD*LILLHL Trigger: AAGATGTAACAAGATCAGCAAATCTAACTGACCAGC...CAGGGGAGTATGTAGCCCGGGGTGGCCCAATGGGTGTGAGTATGGGACAGCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| CDS-3UTR CAA 90 bp | TCCATGCATCATCACTGCGGGGTGGTGAGGGTGTCCAGGAATGTACGTATGCATCTCCTGGTGAATGGCTaGAGGATGCTTTTCGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SMHHHCGVVRVSRNVRMHLLVNG*RMLFAC Trigger: GCAAGCGAAAAGCATCCTCAAGCCATTCACCAGGAG...ATGCATACGTACATTCCTGGACACCCTCACCACCCCGCAGTGATGATGCATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
||
| CDS-3UTR CAA 90 bp | GATGTGACAGTTAGGCTTCTAAACACACACGGCCTTTGGGTTTCCATGCCTCCTGTCCAAGCCATCACCTaGCTCACTGCTGTTATCCCC | + |
|
Preference number: 5 (lower is better) Translates to: DVTVRLLNTHGLWVSMPPVQAIT*LTAVIP Trigger: GGGGATAACAGCAGTGAGCAAGGTGATGGCTTGGAC...AGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAGCCTAACTGTCACATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CAA 90 bp | TGGCGCTCTGATGCCCATGTGCTGCTGACCGTCCATTACAAAACCTCCCATTGGACCGCTATATCTTCATaGAATGACTCTGACGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: WRSDAHVLLTVHYKTSHWTAISS*NDSDEQ Trigger: CTGCTCGTCAGAGTCATTCAATGAAGATATAGCGGT...CCAATGGGAGGTTTTGTAATGGACGGTCAGCAGCACATGGGCATCAGAGCGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 |
||
| CDS-3UTR CAA 90 bp | TGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGGCTTGAGGCTGACATATTGGTGGCTACTTaGGGAAAGATGCCACGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: CALIVGSPVLRTEGLEADILVAT*GKMPRF Trigger: AAAGCGTGGCATCTTTCCCAAAGTAGCCACCAATAT...GTCAGCCTCAAGCCCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| CDS-3UTR CAA 90 bp | CTGCTGACCGTCCATTACAAAACCTCCCATTGGCTGTCCATCAGGGTTATAAGGCTCTTTAAAGCGTCATaGACCGAGGAACCCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLTVHYKTSHWLSIRVIRLFKAS*TEEPML Trigger: CAGCATGGGTTCCTCGGTCAATGACGCTTTAAAGAG...CCTTATAACCCTGATGGACAGCCAATGGGAGGTTTTGTAATGGACGGTCAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177357.4 |
||
| CDS-3UTR CAA 90 bp | TCCATGCATCATCACTGCGGGGTGGTGAGGGTGTCCAGGAATGTACGTATGCATACCGCTATATCTTCATaGAATGACTCTGACGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SMHHHCGVVRVSRNVRMHTAISS*NDSDEQ Trigger: CTGCTCGTCAGAGTCATTCAATGAAGATATAGCGGT...ATGCATACGTACATTCCTGGACACCCTCACCACCCCGCAGTGATGATGCATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| CDS-3UTR CAA 90 bp | TCGAGATCAGTCACCATTGTAGACAACGCATATTCCCTTAAGCTACTGAGCGTGGTCCAAGCCATCACCTaGCTCACTGCTGTTATCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SRSVTIVDNAYSLKLLSVVQAIT*LTAVIP Trigger: GGGGATAACAGCAGTGAGCAAGGTGATGGCTTGGAC...CACGCTCAGTAGCTTAAGGGAATATGCGTTGTCTACAATGGTGACTGATCTCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| CDS-3UTR CAA 90 bp | TCCATGCATCATCACTGCGGGGTGGTGAGGGTGTCCAGGAATGTACGTATGCATATATTGGTGGCTACTTaGGGAAAGATGCCACGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SMHHHCGVVRVSRNVRMHILVAT*GKMPRF Trigger: AAAGCGTGGCATCTTTCCCAAAGTAGCCACCAATAT...ATGCATACGTACATTCCTGGACACCCTCACCACCCCGCAGTGATGATGCATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| CDS-3UTR CAA 90 bp | ATCTGGGACAGTTTTCCTAGGCTCACTGCACTAGGCCTGCCACTGAAGATTGCAGAGGATGCTTTTCGCTaGCCTGACTTGAATACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: IWDSFPRLTALGLPLKIAEDAFR*PDLNTV Trigger: GACTGTATTCAAGTCAGGCAAGCGAAAAGCATCCTC...TGCAATCTTCAGTGGCAGGCCTAGTGCAGTGAGCCTAGGAAAACTGTCCCAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
||
| CDS-3UTR CAA 90 bp | AGAGATGCTGTTAAGGGCAATTTAGGAAATGAACTAGGGCTTTGGAGTTCAAAACAGGTGGTGGACCGGTaGCATGGACCTGGCTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: RDAVKGNLGNELGLWSSKQVVDR*HGPGCM Trigger: CATGCAGCCAGGTCCATGCAACCGGTCCACCACCTG...TTTTGAACTCCAAAGCCCTAGTTCATTTCCTAAATTGCCCTTAACAGCATCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| CDS-3UTR CAA 90 bp | TGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGGCTTGAGGCTGACCTTCACTGTCTGATTTaGATCCTCCTTCTCTATCAT | + |
|
Preference number: 5 (lower is better) Translates to: CALIVGSPVLRTEGLEADLHCLI*ILLLYH Trigger: ATGATAGAGAAGGAGGATCAAAATCAGACAGTGAAG...GTCAGCCTCAAGCCCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| CDS-3UTR CAA 90 bp | TGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGGCTTGAGGCTGACGCTGGTCAGTTAGATTaGCTGATCTTGTTACATCTT | + |
|
Preference number: 5 (lower is better) Translates to: CALIVGSPVLRTEGLEADAGQLD*LILLHL Trigger: AAGATGTAACAAGATCAGCAAATCTAACTGACCAGC...GTCAGCCTCAAGCCCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| CDS-3UTR CAA 90 bp | GAACTCCATAGTCCTTGCAGGAAAAGACCTGATTCGAGATCAGTCACCATTGTAGTCCAAGCCATCACCTaGCTCACTGCTGTTATCCCC | + |
|
Preference number: 5 (lower is better) Translates to: ELHSPCRKRPDSRSVTIVVQAIT*LTAVIP Trigger: GGGGATAACAGCAGTGAGCAAGGTGATGGCTTGGAC...TACAATGGTGACTGATCTCGAATCAGGTCTTTTCCTGCAAGGACTATGGAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CAA 90 bp | ATGTCCATGACTTGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGGTTACAAAACCTCCCATaGGCTGTCCATCAGGGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: MSMTCALIVGSPVLRTEGLQNLP*AVHQGY Trigger: ATAACCCTGATGGACAGCCAATGGGAGGTTTTGTAA...CCCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACAAGTCATGGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068264.14 ENSMUST00000177417.8 |
||
| CDS-3UTR CAA 90 bp | CAATGTCTACATAAATGCTCCAAGGTGGGACTATGGAAAAATACACACATGACCCTCCCCTGGCATACTTaGCAGCCCTGGCGCTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: QCLHKCSKVGLWKNTHMTLPWHT*QPWRSD Trigger: ATCAGAGCGCCAGGGCTGCAAAGTATGCCAGGGGAG...GGTCATGTGTGTATTTTTCCATAGTCCCACCTTGGAGCATTTATGTAGACATTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000185131.8 |
||
| CDS-3UTR CAA 90 bp | GCGTACCCCACTCAGTTAACCTTATATGCATGCCACCTTGCACTAATCTGCTACGTGAATGTCCATGACTaGTGCACTCATTGTCGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: AYPTQLTLYACHLALICYVNVHD*CTHCRV Trigger: GACCCGACAATGAGTGCACAAGTCATGGACATTCAC...GTAGCAGATTAGTGCAAGGTGGCATGCATATAAGGTTAACTGAGTGGGGTACGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185131.8 |
||
| CDS-3UTR CAA 90 bp | TGGAACTCCATAGTCCTTGCAGGAAAAGACCTGATTCGAGATCAGTCACCATTGCTCTTTAAAGCGTCATaGACCGAGGAACCCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WNSIVLAGKDLIRDQSPLLFKAS*TEEPML Trigger: CAGCATGGGTTCCTCGGTCAATGACGCTTTAAAGAG...CAATGGTGACTGATCTCGAATCAGGTCTTTTCCTGCAAGGACTATGGAGTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CAA 90 bp | GCAAATTCAAGCCCCAGGCTAGAAAGAGGGAGAGGGAGGAGAAGAGAGAGAGAGGCTGGTCAGTTAGATTaGCTGATCTTGTTACATCTT | + |
|
Preference number: 5 (lower is better) Translates to: ANSSPRLERGRGRRREREAGQLD*LILLHL Trigger: AAGATGTAACAAGATCAGCAAATCTAACTGACCAGC...CTCTCTCTCTCTTCTCCTCCCTCTCCCTCTTTCTAGCCTGGGGCTTGAATTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CAA 90 bp | ATGTCAAGAATGGAACTCCATAGTCCTTGCAGGAAAAGACCTGATTCGAGATCAGTCCAAGCCATCACCTaGCTCACTGCTGTTATCCCC | + |
|
Preference number: 5 (lower is better) Translates to: MSRMELHSPCRKRPDSRSVQAIT*LTAVIP Trigger: GGGGATAACAGCAGTGAGCAAGGTGATGGCTTGGAC...TGATCTCGAATCAGGTCTTTTCCTGCAAGGACTATGGAGTTCCATTCTTGACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CAA 90 bp | TTGCATGTCCCCCGAGTTGACTTCGGATGGTTCTCCTGCATTTTAAGAGTCCCTATATTGGTGGCTACTTaGGGAAAGATGCCACGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LHVPRVDFGWFSCILRVPILVAT*GKMPRF Trigger: AAAGCGTGGCATCTTTCCCAAAGTAGCCACCAATAT...AGGGACTCTTAAAATGCAGGAGAACCATCCGAAGTCAACTCGGGGGACATGCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CAA 90 bp | AGTTTTTCCCATCCTTCCCGATTTACATCTGTTCAGGCCAATTCAAATATGGTGTGGCTGACTGCTCGGTaGGACTGGTCTATCATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SFSHPSRFTSVQANSNMVWLTAR*DWSIMG Trigger: GCCCATGATAGACCAGTCCAACCGAGCAGTCAGCCA...CACCATATTTGAATTGGCCTGAACAGATGTAAATCGGGAAGGATGGGAAAAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068264.14 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CAA 90 bp | TTGCATGTCCCCCGAGTTGACTTCGGATGGTTCTCCTGCATTTTAAGAGTCCCTTTACAAAACCTCCCATaGGCTGTCCATCAGGGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: LHVPRVDFGWFSCILRVPLQNLP*AVHQGY Trigger: ATAACCCTGATGGACAGCCAATGGGAGGTTTTGTAA...AGGGACTCTTAAAATGCAGGAGAACCATCCGAAGTCAACTCGGGGGACATGCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000068264.14 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CAA 90 bp | TCAGACCTTCCTGTCCCTTGCAGGATAACTGTAAGGCTTTTTAATGTAAGGAGGCTCTTTAAAGCGTCATaGACCGAGGAACCCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SDLPVPCRITVRLFNVRRLFKAS*TEEPML Trigger: CAGCATGGGTTCCTCGGTCAATGACGCTTTAAAGAG...CCTCCTTACATTAAAAAGCCTTACAGTTATCCTGCAAGGGACAGGAAGGTCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CAA 90 bp | GACCTTCCTGTCCCTTGCAGGATAACTGTAAGGCTTTTTAATGTAAGGAGGCTTCTCTTTAAAGCGTCATaGACCGAGGAACCCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: DLPVPCRITVRLFNVRRLLFKAS*TEEPML Trigger: CAGCATGGGTTCCTCGGTCAATGACGCTTTAAAGAG...AAGCCTCCTTACATTAAAAAGCCTTACAGTTATCCTGCAAGGGACAGGAAGGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CAA 90 bp | GTTAGGCTTCTAAACACACACGGCCTTTGGGTTTCCATGCCTCCTCCTACCAGTCTTCACTGTCTGATTTaGATCCTCCTTCTCTATCAT | + |
|
Preference number: 5 (lower is better) Translates to: VRLLNTHGLWVSMPPPTSLHCLI*ILLLYH Trigger: ATGATAGAGAAGGAGGATCAAAATCAGACAGTGAAG...ACTGGTAGGAGGAGGCATGGAAACCCAAAGGCCGTGTGTGTTTAGAAGCCTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CAA 90 bp | TCCACAACAAAAAGTATAATTAGCGTACCCCACTCAGTTAACCTTATATGCATGGGCTTGAGGCTGACATaGGCATTCCAGGGTGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: STTKSIISVPHSVNLICMGLRLT*AFQGGA Trigger: AGCCCCACCCTGGAATGCCAATGTCAGCCTCAAGCC...CATGCATATAAGGTTAACTGAGTGGGGTACGCTAATTATACTTTTTGTTGTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000185131.8 |
||
| CDS-3UTR CAA 90 bp | AATGTCCATGACTTGTGCACTCATTGTCGGGTCTCCTGTGTTAAGAACCGAGGGGCTGGTCAGTTAGATTaGCTGATCTTGTTACATCTT | + |
|
Preference number: 5 (lower is better) Translates to: NVHDLCTHCRVSCVKNRGAGQLD*LILLHL Trigger: AAGATGTAACAAGATCAGCAAATCTAACTGACCAGC...CCCTCGGTTCTTAACACAGGAGACCCGACAATGAGTGCACAAGTCATGGACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| CDS-3UTR CAA 90 bp | TCAGACCTTCCTGTCCCTTGCAGGATAACTGTAAGGCTTTTTAATGTAAGGAGGACCGCTATATCTTCATaGAATGACTCTGACGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SDLPVPCRITVRLFNVRRTAISS*NDSDEQ Trigger: CTGCTCGTCAGAGTCATTCAATGAAGATATAGCGGT...CCTCCTTACATTAAAAAGCCTTACAGTTATCCTGCAAGGGACAGGAAGGTCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CAA 90 bp | AGAGAGAGAGAGCGCACGCACATGGCTGAAATCCTAGGCAAGAAGAAAGATTCTCTTCACTGTCTGATTTaGATCCTCCTTCTCTATCAT | + |
|
Preference number: 5 (lower is better) Translates to: RERERTHMAEILGKKKDSLHCLI*ILLLYH Trigger: ATGATAGAGAAGGAGGATCAAAATCAGACAGTGAAG...AGAATCTTTCTTCTTGCCTAGGATTTCAGCCATGTGCGTGCGCTCTCTCTCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CAA 90 bp | AGAGAGAGAGAGCGCACGCACATGGCTGAAATCCTAGGCAAGAAGAAAGATTCTGCTGGTCAGTTAGATTaGCTGATCTTGTTACATCTT | + |
|
Preference number: 5 (lower is better) Translates to: RERERTHMAEILGKKKDSAGQLD*LILLHL Trigger: AAGATGTAACAAGATCAGCAAATCTAACTGACCAGC...AGAATCTTTCTTCTTGCCTAGGATTTCAGCCATGTGCGTGCGCTCTCTCTCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CAA 90 bp | ACATGCTCTTTCCTCTCCTTGCACTGCTGCAGACTGCTTACATTTTGCAAATCAATATTGGTGGCTACTTaGGGAAAGATGCCACGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TCSFLSLHCCRLLTFCKSILVAT*GKMPRF Trigger: AAAGCGTGGCATCTTTCCCAAAGTAGCCACCAATAT...TGATTTGCAAAATGTAAGCAGTCTGCAGCAGTGCAAGGAGAGGAAAGAGCATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
||
| CDS-3UTR CAA 90 bp | GACCTTCCTGTCCCTTGCAGGATAACTGTAAGGCTTTTTAATGTAAGGAGGCTTTTACAAAACCTCCCATaGGCTGTCCATCAGGGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: DLPVPCRITVRLFNVRRLLQNLP*AVHQGY Trigger: ATAACCCTGATGGACAGCCAATGGGAGGTTTTGTAA...AAGCCTCCTTACATTAAAAAGCCTTACAGTTATCCTGCAAGGGACAGGAAGGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000068264.14 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CAA 90 bp | AAAATCCTGCAAATCAGACCTTCCTGTCCCTTGCAGGATAACTGTAAGGCTTTTACCGCTATATCTTCATaGAATGACTCTGACGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KILQIRPSCPLQDNCKAFTAISS*NDSDEQ Trigger: CTGCTCGTCAGAGTCATTCAATGAAGATATAGCGGT...AAAAGCCTTACAGTTATCCTGCAAGGGACAGGAAGGTCTGATTTGCAGGATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CAA 90 bp | TCCACAACAAAAAGTATAATTAGCGTACCCCACTCAGTTAACCTTATATGCATGCTCTTTAAAGCGTCATaGACCGAGGAACCCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: STTKSIISVPHSVNLICMLFKAS*TEEPML Trigger: CAGCATGGGTTCCTCGGTCAATGACGCTTTAAAGAG...CATGCATATAAGGTTAACTGAGTGGGGTACGCTAATTATACTTTTTGTTGTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CAA 90 bp | TGCAAATCAGACCTTCCTGTCCCTTGCAGGATAACTGTAAGGCTTTTTAATGTAACCGCTATATCTTCATaGAATGACTCTGACGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CKSDLPVPCRITVRLFNVTAISS*NDSDEQ Trigger: CTGCTCGTCAGAGTCATTCAATGAAGATATAGCGGT...TACATTAAAAAGCCTTACAGTTATCCTGCAAGGGACAGGAAGGTCTGATTTGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CAA 90 bp | GATTCGAGATCAGTCACCATTGTAGACAACGCATATTCCCTTAAGCTACTGAGCCTTCACTGTCTGATTTaGATCCTCCTTCTCTATCAT | + |
|
Preference number: 5 (lower is better) Translates to: DSRSVTIVDNAYSLKLLSLHCLI*ILLLYH Trigger: ATGATAGAGAAGGAGGATCAAAATCAGACAGTGAAG...GCTCAGTAGCTTAAGGGAATATGCGTTGTCTACAATGGTGACTGATCTCGAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| CDS-3UTR CAA 90 bp | AAAATCCTGCAAATCAGACCTTCCTGTCCCTTGCAGGATAACTGTAAGGCTTTTCTTCACTGTCTGATTTaGATCCTCCTTCTCTATCAT | + |
|
Preference number: 5 (lower is better) Translates to: KILQIRPSCPLQDNCKAFLHCLI*ILLLYH Trigger: ATGATAGAGAAGGAGGATCAAAATCAGACAGTGAAG...AAAAGCCTTACAGTTATCCTGCAAGGGACAGGAAGGTCTGATTTGCAGGATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
||
| CDS-3UTR CAA 90 bp | AGATCAGTCACCATTGTAGACAACGCATATTCCCTTAAGCTACTGAGCGTGAATGCTGGTCAGTTAGATTaGCTGATCTTGTTACATCTT | + |
|
Preference number: 5 (lower is better) Translates to: RSVTIVDNAYSLKLLSVNAGQLD*LILLHL Trigger: AAGATGTAACAAGATCAGCAAATCTAACTGACCAGC...ATTCACGCTCAGTAGCTTAAGGGAATATGCGTTGTCTACAATGGTGACTGATCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 |
||
| CDS-3UTR CAA 90 bp | TCCACAACAAAAAGTATAATTAGCGTACCCCACTCAGTTAACCTTATATGCATGTTTCGCTTGCCTGACTaGAATACAGTCACTAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: STTKSIISVPHSVNLICMFRLPD*NTVTRG Trigger: CCCTCTAGTGACTGTATTCAAGTCAGGCAAGCGAAA...CATGCATATAAGGTTAACTGAGTGGGGTACGCTAATTATACTTTTTGTTGTGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
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| CDS-3UTR CAA 90 bp | AGAGATGCTGTTAAGGGCAATTTAGGAAATGAACTAGGGCTTTGGAGTTCAAAACTTCACTGTCTGATTTaGATCCTCCTTCTCTATCAT | + |
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Preference number: 5 (lower is better) Translates to: RDAVKGNLGNELGLWSSKLHCLI*ILLLYH Trigger: ATGATAGAGAAGGAGGATCAAAATCAGACAGTGAAG...TTTTGAACTCCAAAGCCCTAGTTCATTTCCTAAATTGCCCTTAACAGCATCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144988.8 ENSMUST00000177417.8 |
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| CDS GCA 72 bp | GTGGTTCAGGTGGTGGACCGGTTGCATGGACCTGGCTaGATGCGGGTCCCCATACATCGTGGAGGGGATGCC | + |
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Preference number: 6 (lower is better) Translates to: VVQVVDRLHGPG*MRVPIHRGGDA Trigger: GGCATCCCCTCCACGATGTATGGGGACCCGCATGCAGCCAGGTCCATGCAACCGGTCCACCACCTGAACCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177417.8 ENSMUST00000185131.8 |
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| CDS CCA 72 bp | CACCGCTGGAAGGGCCCGGGGTTCCTCCTGAACGAGTaGATGCCGTGTCATCATGGTCTCTATTCCAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: HRWKGPGFLLNE*MPCHHGLYSKR Trigger: CCTCTTGGAATAGAGACCATGATGACACGGCATCCACTCGTTCAGGAGGAACCCCGGGCCCTTCCAGCGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 ENSMUST00000185131.8 |
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| CDS CCA 72 bp | TGCTGTTATCCCCACTGTGTGAAGTATGGCCACCGCTaGAAGGGCCCGGGGTTCCTCCTGAACGAGTGGATG | + |
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Preference number: 6 (lower is better) Translates to: CCYPHCVKYGHR*KGPGFLLNEWM Trigger: CATCCACTCGTTCAGGAGGAACCCCGGGCCCTTCCAGCGGTGGCCATACTTCACACAGTGGGGATAACAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 ENSMUST00000185131.8 |
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| CDS TCA 72 bp | AGTATGGCCACCGCTGGAAGGGCCCGGGGTTCCTCCTaGACGAGTGGATGCCGTGTCATCATGGTCTCTATT | + |
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Preference number: 6 (lower is better) Translates to: SMATAGRARGSS*TSGCRVIMVSI Trigger: AATAGAGACCATGATGACACGGCATCCACTCGTTCAGGAGGAACCCCGGGCCCTTCCAGCGGTGGCCATACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 ENSMUST00000185131.8 |
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| CDS CAA 90 bp | CCAGGCAGCAGCCCTCCTGGTGAATGGCTTGAGGATGCTTTTCGCTaGCCTGACTTGAATACAGTCACTAGAGGGGACTTGCCTGCTCGG | + |
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Preference number: 6 (lower is better) Translates to: PGSSPPGEWLEDAFR*PDLNTVTRGDLPAR Trigger: CCGAGCAGGCAAGTCCCCTCTAGTGACTGTATTCAAGTCAGGCAAGCGAAAAGCATCCTCAAGCCATTCACCAGGAGGGCTGCTGCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144988.8 |
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| CDS TCA 72 bp | CTCATAGGTCCTGGCGCTCTGATGCCCATGTGCTGCTaGCCGTCCATTACAAAACCTCCCATTGGCTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: LIGPGALMPMCC*PSITKPPIGCP Trigger: TGGACAGCCAATGGGAGGTTTTGTAATGGACGGTCAGCAGCACATGGGCATCAGAGCGCCAGGACCTATGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068264.14 |
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| CDS CCA 72 bp | GGGGTTCCTCCTGAACGAGTGGATGCCGTGTCATCATaGTCTCTATTCCAAGAGGGCTGGTCAGTTAGATTT | + |
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Preference number: 6 (lower is better) Translates to: GVPPERVDAVSS*SLFQEGWSVRF Trigger: AAATCTAACTGACCAGCCCTCTTGGAATAGAGACCATGATGACACGGCATCCACTCGTTCAGGAGGAACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 ENSMUST00000185131.8 |
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| CDS CAA 72 bp | CATGGTCTCTATTCCAAGAGGGCTGGTCAGTTAGATTaGCTGATCTTGTTACATCTTCACTGTCTGATTTTG | + |
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Preference number: 6 (lower is better) Translates to: HGLYSKRAGQLD*LILLHLHCLIL Trigger: CAAAATCAGACAGTGAAGATGTAACAAGATCAGCAAATCTAACTGACCAGCCCTCTTGGAATAGAGACCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 ENSMUST00000185131.8 |
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| CDS CAA 90 bp | CATGGTCTCTATTCCAAGAGGGCTGGTCAGTTAGATTTGCTGATCTaGTTACATCTTCACTGTCTGATTTTGATCCTCCTTCTCTATCAT | + |
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Preference number: 6 (lower is better) Translates to: HGLYSKRAGQLDLLI*LHLHCLILILLLYH Trigger: ATGATAGAGAAGGAGGATCAAAATCAGACAGTGAAGATGTAACAAGATCAGCAAATCTAACTGACCAGCCCTCTTGGAATAGAGACCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 ENSMUST00000185131.8 |
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| CDS CAA 72 bp | GATTTGCTGATCTTGTTACATCTTCACTGTCTGATTTaGATCCTCCTTCTCTATCATCTATCACCAAATCGA | + |
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Preference number: 6 (lower is better) Translates to: DLLILLHLHCLI*ILLLYHLSPNR Trigger: TCGATTTGGTGATAGATGATAGAGAAGGAGGATCAAAATCAGACAGTGAAGATGTAACAAGATCAGCAAATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000068264.14 ENSMUST00000102878.11 ENSMUST00000144988.8 ENSMUST00000177357.4 ENSMUST00000177417.8 ENSMUST00000185131.8 |
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