Pregenerated sensors for MEIOSIN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000085601Ensembl transcript IDs: ENSMUST00000127433.7, ENSMUST00000141380.3
Found 173 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTGCCCAGGAGCCTGCACCAGTCAGCATGAAGCCGGGCCCAGAGTaGCATTCAGAGAGCCCTGACAGAGAATGTGAAGCCACTTCTCAT | + |
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Preference number: 1 (lower is better) Translates to: PAQEPAPVSMKPGPE*HSESPDRECEATSH Trigger: ATGAGAAGTGGCTTCACATTCTCTGTCAGGGCTCTCTGAATGGCACTCTGGGCCCGGCTTCATGCTGACTGGTGCAGGCTCCTGGGCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR CCA 90 bp | AGGGCTCCAAGACAGGGGGCAAGGAGAGGGACCAGGCATGGTGCCTaGGTGAAGCTGGAGTGCATGAGTCACCCCAACATTGACTCATAT | + |
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Preference number: 1 (lower is better) Translates to: RAPRQGARRGTRHGA*VKLECMSHPNIDSY Trigger: ATATGAGTCAATGTTGGGGTGACTCATGCACTCCAGCTTCACCCAGGCACCATGCCTGGTCCCTCTCCTTGCCCCCTGTCTTGGAGCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR TCA 90 bp | TTTGGAGCCTCCCCCTCACTACATGACTTAGTAGTCCCTGCATTGTaGAGAGCTGTAGGCCCCTCAAGGCCCTCTGGGAGTCCACTGAGC | + |
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Preference number: 1 (lower is better) Translates to: FGASPSLHDLVVPAL*RAVGPSRPSGSPLS Trigger: GCTCAGTGGACTCCCAGAGGGCCTTGAGGGGCCTACAGCTCTTCACAATGCAGGGACTACTAAGTCATGTAGTGAGGGGGAGGCTCCAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR CCA 90 bp | CAAGAACACCAACTGGGCCCCTTGTCCATCGCCTTCAGACACAGATaGTTCAGTTGTGGGGTAGGTGCTAGGGCTGAGGACTCCTGGATA | + |
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Preference number: 1 (lower is better) Translates to: QEHQLGPLSIAFRHR*FSCGVGARAEDSWI Trigger: TATCCAGGAGTCCTCAGCCCTAGCACCTACCCCACAACTGAACCATCTGTGTCTGAAGGCGATGGACAAGGGGCCCAGTTGGTGTTCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR TCA 90 bp | CCTTACCTGACACAGGGCTGTGCCCTGGTGAGGAAAAAGGACCTCTaGACCTTGATGTCAGCATTGGGCTCTCCACCCTGGACTTCTACA | + |
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Preference number: 1 (lower is better) Translates to: PYLTQGCALVRKKDL*TLMSALGSPPWTST Trigger: TGTAGAAGTCCAGGGTGGAGAGCCCAATGCTGACATCAAGGTTCAGAGGTCCTTTTTCCTCACCAGGGCACAGCCCTGTGTCAGGTAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR CCA 90 bp | AAGAGGTATGGAAGATCAGCAGGTGACAACCACCAGTTTAGAAGGTaGGAAGCCAGACCTGCCCAGGAGCCTGCACCAGTCAGCATGAAG | + |
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Preference number: 1 (lower is better) Translates to: KRYGRSAGDNHQFRR*EARPAQEPAPVSMK Trigger: CTTCATGCTGACTGGTGCAGGCTCCTGGGCAGGTCTGGCTTCCCACCTTCTAAACTGGTGGTTGTCACCTGCTGATCTTCCATACCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR CCA 90 bp | TGGGTGGTGAGGACAGAGGTTGTAACTCTGGGAAAGATGAAGGTGTaGGGTGCACAGTCAGGGAGACAAGCCAGGAAGACAGAACCTACC | + |
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Preference number: 1 (lower is better) Translates to: WVVRTEVVTLGKMKV*GAQSGRQARKTEPT Trigger: GGTAGGTTCTGTCTTCCTGGCTTGTCTCCCTGACTGTGCACCCCACACCTTCATCTTTCCCAGAGTTACAACCTCTGTCCTCACCACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR CCA 90 bp | CTAGAGGGGGTACATGAACAACAGGGAAGCATGATGGAGAGGGACTaGGTGCTTGGCAGCCTTAGAGGGAGTTCAAAGCCAGGACTTACA | + |
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Preference number: 1 (lower is better) Translates to: LEGVHEQQGSMMERD*VLGSLRGSSKPGLT Trigger: TGTAAGTCCTGGCTTTGAACTCCCTCTAAGGCTGCCAAGCACCCAGTCCCTCTCCATCATGCTTCCCTGTTGTTCATGTACCCCCTCTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR CCA 90 bp | TTCAGAAGGCTCAAAGCCTACAAGGAGAGGACTTGTAATCACCATTaGGGCTGTCCTCGGAGGTCCAAACAGGAAGCCAGGGGTCAGAGT | + |
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Preference number: 1 (lower is better) Translates to: FRRLKAYKERTCNHH*GCPRRSKQEARGQS Trigger: ACTCTGACCCCTGGCTTCCTGTTTGGACCTCCGAGGACAGCCCCAATGGTGATTACAAGTCCTCTCCTTGTAGGCTTTGAGCCTTCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR GCA 90 bp | TGCTTGGCAGCCTTAGAGGGAGTTCAAAGCCAGGACTTACATTCCTaGCTGTTCTCCTGTCCTTGTGAGGCATTTCAACCCCTTCTCACC | + |
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Preference number: 1 (lower is better) Translates to: CLAALEGVQSQDLHS*LFSCPCEAFQPLLT Trigger: GGTGAGAAGGGGTTGAAATGCCTCACAAGGACAGGAGAACAGGCAGGAATGTAAGTCCTGGCTTTGAACTCCCTCTAAGGCTGCCAAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR TCA 90 bp | CTAGCCTGTGTCCAAGTCTCATTCATAGGCCAGCTAAGGGCACAGTaGCAGGTTTTTGGAGCCTCCCCCTCACTACATGACTTAGTAGTC | + |
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Preference number: 1 (lower is better) Translates to: LACVQVSFIGQLRAQ*QVFGASPSLHDLVV Trigger: GACTACTAAGTCATGTAGTGAGGGGGAGGCTCCAAAAACCTGTCACTGTGCCCTTAGCTGGCCTATGAATGAGACTTGGACACAGGCTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR TCA 90 bp | CCTGTCCTTGTGAGGCATTTCAACCCCTTCTCACCTCTGATACAGTaGCAGACAAGGGACAGTCTGGCTTCAGAGAAGTCCAGTAGACAT | + |
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Preference number: 1 (lower is better) Translates to: PVLVRHFNPFSPLIQ*QTRDSLASEKSSRH Trigger: ATGTCTACTGGACTTCTCTGAAGCCAGACTGTCCCTTGTCTGTCACTGTATCAGAGGTGAGAAGGGGTTGAAATGCCTCACAAGGACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR TCA 90 bp | CTGCCTGCAAGAACTGGAATCAGAGGAAGACACAGAGCGCTGGACTaGGCTCACATGGCTAATTGCATGAAACTCCAGGGAATTCAATCA | + |
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Preference number: 1 (lower is better) Translates to: LPARTGIRGRHRALD*AHMANCMKLQGIQS Trigger: TGATTGAATTCCCTGGAGTTTCATGCAATTAGCCATGTGAGCTCAGTCCAGCGCTCTGTGTCTTCCTCTGATTCCAGTTCTTGCAGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR GCA 90 bp | GCCTGGCAACACATCAACAACAAAAGAGGAAAAATCATCACAGTATaGCAGGGCCAGCAGATTGACCGTAGTGACCCAAAGCGACGTGTT | + |
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Preference number: 1 (lower is better) Translates to: AWQHINNKRGKIITV*QGQQIDRSDPKRRV Trigger: AACACGTCGCTTTGGGTCACTACGGTCAATCTGCTGGCCCTGGCATACTGTGATGATTTTTCCTCTTTTGTTGTTGATGTGTTGCCAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR CCA 90 bp | ACCGTAGTGACCCAAAGCGACGTGTTTAAAAGGTTCTGCAGTAGCTaGCTCAAGGAAAAGCAGGGATTGATTAGCAATGCCTGGCATAGC | + |
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Preference number: 1 (lower is better) Translates to: TVVTQSDVFKRFCSS*LKEKQGLISNAWHS Trigger: GCTATGCCAGGCATTGCTAATCAATCCCTGCTTTTCCTTGAGCCAGCTACTGCAGAACCTTTTAAACACGTCGCTTTGGGTCACTACGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR GCA 90 bp | AGCAGATTGACCGTAGTGACCCAAAGCGACGTGTTTAAAAGGTTCTaGAGTAGCTGGCTCAAGGAAAAGCAGGGATTGATTAGCAATGCC | + |
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Preference number: 1 (lower is better) Translates to: SRLTVVTQSDVFKRF*SSWLKEKQGLISNA Trigger: GGCATTGCTAATCAATCCCTGCTTTTCCTTGAGCCAGCTACTGCAGAACCTTTTAAACACGTCGCTTTGGGTCACTACGGTCAATCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR-3UTR GCA 90 bp | AAGCCGGGCCCAGAGTGCCATTCAGAGAGCCCTGACAGAGAATGTGAAGCCACTAGGGACCAGGCATGGTaGCTGGGTGAAGCTGGAGTG | + |
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Preference number: 2 (lower is better) Translates to: KPGPECHSESPDRECEATRDQAW*LGEAGV Trigger: CACTCCAGCTTCACCCAGGCACCATGCCTGGTCCCT...AGTGGCTTCACATTCTCTGTCAGGGCTCTCTGAATGGCACTCTGGGCCCGGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR-3UTR TCA 90 bp | AGGTCCAAACAGGAAGCCAGGGGTCAGAGTCTGGGGCTTCTTTGTCTGCCTCACCAAAGGCTTGGCTTCTaGGAGCTGGAGGGAGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: RSKQEARGQSLGLLCLPHQRLGF*ELEGVE Trigger: CTCCACTCCCTCCAGCTCTCAGAAGCCAAGCCTTTG...GTGAGGCAGACAAAGAAGCCCCAGACTCTGACCCCTGGCTTCCTGTTTGGACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR-3UTR GCA 90 bp | CCAAACAGGAAGCCAGGGGTCAGAGTCTGGGGCTTCTTTGTCTGCCTCACTGGAGAGGGAGTGGAGTGTTaGTGCTGTGTCTGGCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: PNRKPGVRVWGFFVCLTGEGVEC*CCVWPA Trigger: TGCTGGCCAGACACAGCAGCAACACTCCACTCCCTC...TCCAGTGAGGCAGACAAAGAAGCCCCAGACTCTGACCCCTGGCTTCCTGTTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR-3UTR GCA 90 bp | GGGAGTCCACTGAGCTCAACTCAGGCCCAAGTATTTTTGGTGGGTGAGTATCCCGTGGGAAGCCAGACCTaGCCAGGAGCCTGCACCAGT | + |
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Preference number: 2 (lower is better) Translates to: GSPLSSTQAQVFLVGEYPVGSQT*PGACTS Trigger: ACTGGTGCAGGCTCCTGGGCAGGTCTGGCTTCCCAC...GGGATACTCACCCACCAAAAATACTTGGGCCTGAGTTGAGCTCAGTGGACTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR-3UTR TCA 90 bp | AAGCCGGGCCCAGAGTGCCATTCAGAGAGCCCTGACAGAGAATGTGAAGCCACTAACAACAGGGAAGCATaGTGGAGAGGGACTGGGTGC | + |
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Preference number: 2 (lower is better) Translates to: KPGPECHSESPDRECEATNNREA*WRGTGC Trigger: GCACCCAGTCCCTCTCCATCATGCTTCCCTGTTGTT...AGTGGCTTCACATTCTCTGTCAGGGCTCTCTGAATGGCACTCTGGGCCCGGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR-3UTR CCA 90 bp | AAGCCGGGCCCAGAGTGCCATTCAGAGAGCCCTGACAGAGAATGTGAAGCCACTGAGAGCTGGAGGGAGTaGAGTGTTGCTGCTGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: KPGPECHSESPDRECEATESWRE*SVAAVS Trigger: AGACACAGCAGCAACACTCCACTCCCTCCAGCTCTC...AGTGGCTTCACATTCTCTGTCAGGGCTCTCTGAATGGCACTCTGGGCCCGGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR-3UTR CCA 90 bp | GGGAGTCCACTGAGCTCAACTCAGGCCCAAGTATTTTTGGTGGGTGAGTATCCCGAGAGGGACCAGGCATaGTGCCTGGGTGAAGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: GSPLSSTQAQVFLVGEYPERDQA*CLGEAG Trigger: TCCAGCTTCACCCAGGCACCATGCCTGGTCCCTCTC...GGGATACTCACCCACCAAAAATACTTGGGCCTGAGTTGAGCTCAGTGGACTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR-3UTR TCA 90 bp | AAGCCGGGCCCAGAGTGCCATTCAGAGAGCCCTGACAGAGAATGTGAAGCCACTCTCTCTTACAGAGCCTaGCACAAGAAAGGGGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: KPGPECHSESPDRECEATLSYRA*HKKGEL Trigger: CAGCTCCCCTTTCTTGTGTCAGGCTCTGTAAGAGAG...AGTGGCTTCACATTCTCTGTCAGGGCTCTCTGAATGGCACTCTGGGCCCGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR-3UTR TCA 90 bp | AGGTCCAAACAGGAAGCCAGGGGTCAGAGTCTGGGGCTTCTTTGTCTGCCTCACAGGACCTCTGAACCTTaGTGTCAGCATTGGGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: RSKQEARGQSLGLLCLPHRTSEP*CQHWAL Trigger: GAGAGCCCAATGCTGACATCAAGGTTCAGAGGTCCT...GTGAGGCAGACAAAGAAGCCCCAGACTCTGACCCCTGGCTTCCTGTTTGGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR-3UTR TCA 90 bp | ACAGAGGTTGTAACTCTGGGAAAGATGAAGGTGTGGGGTGCACAGTCAGGGAGATGGGGTTTCCTTACCTaGCACAGGGCTGTGCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: TEVVTLGKMKVWGAQSGRWGFLT*HRAVPW Trigger: CCAGGGCACAGCCCTGTGTCAGGTAAGGAAACCCCA...TCTCCCTGACTGTGCACCCCACACCTTCATCTTTCCCAGAGTTACAACCTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR-3UTR GCA 90 bp | GAGACAAGCCAGGAAGACAGAACCTACCTTCTCTTGTGGGCTCTCCACTTCACAAAGCCGGGCCCAGAGTaGCATTCAGAGAGCCCTGAC | + |
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Preference number: 2 (lower is better) Translates to: ETSQEDRTYLLLWALHFTKPGPE*HSESPD Trigger: GTCAGGGCTCTCTGAATGGCACTCTGGGCCCGGCTT...TGTGAAGTGGAGAGCCCACAAGAGAAGGTAGGTTCTGTCTTCCTGGCTTGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR-3UTR GCA 90 bp | ACAGAGGTTGTAACTCTGGGAAAGATGAAGGTGTGGGGTGCACAGTCAGGGAGAACCTGCCCAGGAGCCTaGACCAGTCAGCATGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: TEVVTLGKMKVWGAQSGRTCPGA*TSQHEA Trigger: GGCTTCATGCTGACTGGTGCAGGCTCCTGGGCAGGT...TCTCCCTGACTGTGCACCCCACACCTTCATCTTTCCCAGAGTTACAACCTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR-3UTR CCA 90 bp | AGGTCCAAACAGGAAGCCAGGGGTCAGAGTCTGGGGCTTCTTTGTCTGCCTCACTTGGCTTCTGAGAGCTaGAGGGAGTGGAGTGTTGCT | + |
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Preference number: 2 (lower is better) Translates to: RSKQEARGQSLGLLCLPHLASES*REWSVA Trigger: AGCAACACTCCACTCCCTCCAGCTCTCAGAAGCCAA...GTGAGGCAGACAAAGAAGCCCCAGACTCTGACCCCTGGCTTCCTGTTTGGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR-3UTR CCA 90 bp | CACCCTGGGGTTTCCTTACCTGACACAGGGCTGTGCCCTGGTGAGGAAAAAGGACCCAGAAAGTCTGGATaGTCCTGGAGAAGTGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: HPGVSLPDTGLCPGEEKGPRKSG*SWRSGE Trigger: TTCCCCACTTCTCCAGGACCATCCAGACTTTCTGGG...TCCTTTTTCCTCACCAGGGCACAGCCCTGTGTCAGGTAAGGAAACCCCAGGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR CAA 90 bp | GACATGGTGAGACAGGGTCACATTCTCCGATGCCAAGGAAGAGGTTaGGGCTCTACCTTGGGCCAGGGGTTTTCTAGCCCTACTGATCAG | + |
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Preference number: 2 (lower is better) Translates to: DMVRQGHILRCQGRG*GSTLGQGFSSPTDQ Trigger: CTGATCAGTAGGGCTAGAAAACCCCTGGCCCAAGGTAGAGCCCAAACCTCTTCCTTGGCATCGGAGAATGTGACCCTGTCTCACCATGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR-3UTR TCA 90 bp | CACCCTGGGGTTTCCTTACCTGACACAGGGCTGTGCCCTGGTGAGGAAAAAGGAAAGGGGAGCTGGGAATaGAAGCCCCATGATGTGATA | + |
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Preference number: 2 (lower is better) Translates to: HPGVSLPDTGLCPGEEKGKGSWE*KPHDVI Trigger: TATCACATCATGGGGCTTTCATTCCCAGCTCCCCTT...TCCTTTTTCCTCACCAGGGCACAGCCCTGTGTCAGGTAAGGAAACCCCAGGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR-3UTR TCA 90 bp | CCAAACAGGAAGCCAGGGGTCAGAGTCTGGGGCTTCTTTGTCTGCCTCACTGGAGTTCTCCTGTCCTTGTaGGGCATTTCAACCCCTTCT | + |
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Preference number: 2 (lower is better) Translates to: PNRKPGVRVWGFFVCLTGVLLSL*GISTPS Trigger: AGAAGGGGTTGAAATGCCTCACAAGGACAGGAGAAC...TCCAGTGAGGCAGACAAAGAAGCCCCAGACTCTGACCCCTGGCTTCCTGTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR-3UTR TCA 90 bp | AGGTCCAAACAGGAAGCCAGGGGTCAGAGTCTGGGGCTTCTTTGTCTGCCTCACCTGGTAAACAGATGCTaGCAACAGAAGGGAGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: RSKQEARGQSLGLLCLPHLVNRC*QQKGAC Trigger: ACAGGCTCCCTTCTGTTGTCAGCATCTGTTTACCAG...GTGAGGCAGACAAAGAAGCCCCAGACTCTGACCCCTGGCTTCCTGTTTGGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR-3UTR GCA 90 bp | AGGTCCAAACAGGAAGCCAGGGGTCAGAGTCTGGGGCTTCTTTGTCTGCCTCACCTAGCAGAAATATGCTaGCTCTTCTGGGACCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: RSKQEARGQSLGLLCLPHLAEIC*LFWDQG Trigger: ACCCTGGTCCCAGAAGAGGCAGCATATTTCTGCTAG...GTGAGGCAGACAAAGAAGCCCCAGACTCTGACCCCTGGCTTCCTGTTTGGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR-3UTR CCA 90 bp | AAGCCGGGCCCAGAGTGCCATTCAGAGAGCCCTGACAGAGAATGTGAAGCCACTGCCTTCAGACACAGATaGTTCAGTTGTGGGGTAGGT | + |
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Preference number: 2 (lower is better) Translates to: KPGPECHSESPDRECEATAFRHR*FSCGVG Trigger: ACCTACCCCACAACTGAACCATCTGTGTCTGAAGGC...AGTGGCTTCACATTCTCTGTCAGGGCTCTCTGAATGGCACTCTGGGCCCGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR-3UTR CCA 90 bp | GGGAGTCCACTGAGCTCAACTCAGGCCCAAGTATTTTTGGTGGGTGAGTATCCCACGTGTACACATGAGTaGGGGGTGGGGAGCAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: GSPLSSTQAQVFLVGEYPTCTHE*GVGSRE Trigger: TTCTCTGCTCCCCACCCCCCACTCATGTGTACACGT...GGGATACTCACCCACCAAAAATACTTGGGCCTGAGTTGAGCTCAGTGGACTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR-3UTR TCA 90 bp | TCAACAACAAAAGAGGAAAAATCATCACAGTATGCCAGGGCCAGCAGATTGACCCTGCACCAGTCAGCATaGAGCCGGGCCCAGAGTGCC | + |
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Preference number: 2 (lower is better) Translates to: STTKEEKSSQYARASRLTLHQSA*SRAQSA Trigger: GGCACTCTGGGCCCGGCTTCATGCTGACTGGTGCAG...GGTCAATCTGCTGGCCCTGGCATACTGTGATGATTTTTCCTCTTTTGTTGTTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR-3UTR GCA 90 bp | GAGACAAGCCAGGAAGACAGAACCTACCTTCTCTTGTGGGCTCTCCACTTCACACCTGACACAGGGCTGTaGCCTGGTGAGGAAAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: ETSQEDRTYLLLWALHFTPDTGL*PGEEKG Trigger: TCCTTTTTCCTCACCAGGGCACAGCCCTGTGTCAGG...TGTGAAGTGGAGAGCCCACAAGAGAAGGTAGGTTCTGTCTTCCTGGCTTGTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR-3UTR GCA 90 bp | GAGACAAGCCAGGAAGACAGAACCTACCTTCTCTTGTGGGCTCTCCACTTCACAAGACAGCCCCTGCCCTaGATTTCCATTGTCTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: ETSQEDRTYLLLWALHFTRQPLP*ISIVSP Trigger: AGGGGAGACAATGGAAATGCAGGGCAGGGGCTGTCT...TGTGAAGTGGAGAGCCCACAAGAGAAGGTAGGTTCTGTCTTCCTGGCTTGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR-3UTR CCA 90 bp | GGCAGTGCCATCCCATTTGGTGATATATGCCTAGGTGATAAGACTGTCCAGAGCGGTGCTCCAAAGGCTTaGCTTCTGAGAGCTGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: GSAIPFGDICLGDKTVQSGAPKA*LLRAGG Trigger: CCCTCCAGCTCTCAGAAGCCAAGCCTTTGGAGCACC...GCTCTGGACAGTCTTATCACCTAGGCATATATCACCAAATGGGATGGCACTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR-3UTR CCA 90 bp | CCAAACAGGAAGCCAGGGGTCAGAGTCTGGGGCTTCTTTGTCTGCCTCACTGGAATGGTCCTGGAGAAGTaGGGAATTGCATCACTGGAA | + |
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Preference number: 2 (lower is better) Translates to: PNRKPGVRVWGFFVCLTGMVLEK*GIASLE Trigger: TTCCAGTGATGCAATTCCCCACTTCTCCAGGACCAT...TCCAGTGAGGCAGACAAAGAAGCCCCAGACTCTGACCCCTGGCTTCCTGTTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR-3UTR CCA 90 bp | AGGTCCAAACAGGAAGCCAGGGGTCAGAGTCTGGGGCTTCTTTGTCTGCCTCACAAGTCTGGATGGTCCTaGAGAAGTGGGGAATTGCAT | + |
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Preference number: 2 (lower is better) Translates to: RSKQEARGQSLGLLCLPHKSGWS*RSGELH Trigger: ATGCAATTCCCCACTTCTCCAGGACCATCCAGACTT...GTGAGGCAGACAAAGAAGCCCCAGACTCTGACCCCTGGCTTCCTGTTTGGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR-3UTR TCA 90 bp | AAGCCGGGCCCAGAGTGCCATTCAGAGAGCCCTGACAGAGAATGTGAAGCCACTGTCCAGAGCAGTCTGTaGAAGAGCACAAATAGACAT | + |
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Preference number: 2 (lower is better) Translates to: KPGPECHSESPDRECEATVQSSL*KSTNRH Trigger: ATGTCTATTTGTGCTCTTTCACAGACTGCTCTGGAC...AGTGGCTTCACATTCTCTGTCAGGGCTCTCTGAATGGCACTCTGGGCCCGGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR-3UTR GCA 90 bp | GGGTGTCAGAGTAAGGTAACTATGCCTGAATGTGGGCCAGATTCCAGGGCTCCATGGGTGAAGCTGGAGTaGATGAGTCACCCCAACATT | + |
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Preference number: 2 (lower is better) Translates to: GCQSKVTMPECGPDSRAPWVKLE*MSHPNI Trigger: AATGTTGGGGTGACTCATGCACTCCAGCTTCACCCA...TGGAGCCCTGGAATCTGGCCCACATTCAGGCATAGTTACCTTACTCTGACACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
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| 3UTR-3UTR GCA 90 bp | GAGACAAGCCAGGAAGACAGAACCTACCTTCTCTTGTGGGCTCTCCACTTCACAGGTCACATTCTCCGATaGCAAGGAAGAGGTTTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: ETSQEDRTYLLLWALHFTGHILR*QGRGLG Trigger: GCCCAAACCTCTTCCTTGGCATCGGAGAATGTGACC...TGTGAAGTGGAGAGCCCACAAGAGAAGGTAGGTTCTGTCTTCCTGGCTTGTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR-3UTR CCA 90 bp | AAGCCGGGCCCAGAGTGCCATTCAGAGAGCCCTGACAGAGAATGTGAAGCCACTGGACTCCTGGATAGGTaGCACATTCCTCATTTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: KPGPECHSESPDRECEATGLLDR*HIPHFL Trigger: AAGAAAATGAGGAATGTGCCACCTATCCAGGAGTCC...AGTGGCTTCACATTCTCTGTCAGGGCTCTCTGAATGGCACTCTGGGCCCGGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR-3UTR CCA 90 bp | ACAGAGGTTGTAACTCTGGGAAAGATGAAGGTGTGGGGTGCACAGTCAGGGAGATACAGCATGATCACCTaGAGGAGGGGGTGTCAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: TEVVTLGKMKVWGAQSGRYSMIT*RRGCQS Trigger: ACTCTGACACCCCCTCCTCCAGGTGATCATGCTGTA...TCTCCCTGACTGTGCACCCCACACCTTCATCTTTCCCAGAGTTACAACCTCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR-3UTR CCA 90 bp | GGGAGTCCACTGAGCTCAACTCAGGCCCAAGTATTTTTGGTGGGTGAGTATCCCAGACAAGGGACAGTCTaGCTTCAGAGAAGTCCAGTA | + |
|
Preference number: 2 (lower is better) Translates to: GSPLSSTQAQVFLVGEYPRQGTV*LQRSPV Trigger: TACTGGACTTCTCTGAAGCCAGACTGTCCCTTGTCT...GGGATACTCACCCACCAAAAATACTTGGGCCTGAGTTGAGCTCAGTGGACTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR-3UTR TCA 90 bp | ACAGAGGTTGTAACTCTGGGAAAGATGAAGGTGTGGGGTGCACAGTCAGGGAGAGTGTATACACAAAGGTaGCCCCAATCTTGTCCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: TEVVTLGKMKVWGAQSGRVYTQR*PQSCPS Trigger: AGAGGGACAAGATTGGGGTCACCTTTGTGTATACAC...TCTCCCTGACTGTGCACCCCACACCTTCATCTTTCCCAGAGTTACAACCTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR-3UTR GCA 90 bp | CACCCTGGGGTTTCCTTACCTGACACAGGGCTGTGCCCTGGTGAGGAAAAAGGACCATTTGGTGATATATaGCTAGGTGATAAGACTGTC | + |
|
Preference number: 2 (lower is better) Translates to: HPGVSLPDTGLCPGEEKGPFGDI*LGDKTV Trigger: GACAGTCTTATCACCTAGGCATATATCACCAAATGG...TCCTTTTTCCTCACCAGGGCACAGCCCTGTGTCAGGTAAGGAAACCCCAGGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR-3UTR GCA 90 bp | GAGACAAGCCAGGAAGACAGAACCTACCTTCTCTTGTGGGCTCTCCACTTCACACAGGACTTACATTCCTaGCTGTTCTCCTGTCCTTGT | + |
|
Preference number: 2 (lower is better) Translates to: ETSQEDRTYLLLWALHFTQDLHS*LFSCPC Trigger: ACAAGGACAGGAGAACAGGCAGGAATGTAAGTCCTG...TGTGAAGTGGAGAGCCCACAAGAGAAGGTAGGTTCTGTCTTCCTGGCTTGTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR-3UTR CCA 90 bp | ACAGAGGTTGTAACTCTGGGAAAGATGAAGGTGTGGGGTGCACAGTCAGGGAGATTGATTAGCAATGCCTaGCATAGCAACCAGGGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: TEVVTLGKMKVWGAQSGRLISNA*HSNQGQ Trigger: TTGCCCCTGGTTGCTATGCCAGGCATTGCTAATCAA...TCTCCCTGACTGTGCACCCCACACCTTCATCTTTCCCAGAGTTACAACCTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR-3UTR TCA 90 bp | GAGACAAGCCAGGAAGACAGAACCTACCTTCTCTTGTGGGCTCTCCACTTCACAAGGAAAAAGGACCTCTaGACCTTGATGTCAGCATTG | + |
|
Preference number: 2 (lower is better) Translates to: ETSQEDRTYLLLWALHFTRKKDL*TLMSAL Trigger: CAATGCTGACATCAAGGTTCAGAGGTCCTTTTTCCT...TGTGAAGTGGAGAGCCCACAAGAGAAGGTAGGTTCTGTCTTCCTGGCTTGTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR-3UTR TCA 90 bp | GAGACAAGCCAGGAAGACAGAACCTACCTTCTCTTGTGGGCTCTCCACTTCACAAGGTTGTGTGGGGACTaGAGAACATTTAGGCTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: ETSQEDRTYLLLWALHFTRLCGD*RTFRLF Trigger: AAACAGCCTAAATGTTCTTCAGTCCCCACACAACCT...TGTGAAGTGGAGAGCCCACAAGAGAAGGTAGGTTCTGTCTTCCTGGCTTGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR-3UTR TCA 90 bp | GGGAGTCCACTGAGCTCAACTCAGGCCCAAGTATTTTTGGTGGGTGAGTATCCCTGTTTTATGAATGAATaGGGCTCCTCCCATTCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: GSPLSSTQAQVFLVGEYPCFMNE*GSSHSS Trigger: ACTGGAATGGGAGGAGCCTCATTCATTCATAAAACA...GGGATACTCACCCACCAAAAATACTTGGGCCTGAGTTGAGCTCAGTGGACTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR-3UTR GCA 90 bp | GGGTGTCAGAGTAAGGTAACTATGCCTGAATGTGGGCCAGATTCCAGGGCTCCAGGAGAAGTGGGGAATTaGATCACTGGAATGAGAATT | + |
|
Preference number: 2 (lower is better) Translates to: GCQSKVTMPECGPDSRAPGEVGN*ITGMRI Trigger: AATTCTCATTCCAGTGATGCAATTCCCCACTTCTCC...TGGAGCCCTGGAATCTGGCCCACATTCAGGCATAGTTACCTTACTCTGACACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR-3UTR GCA 90 bp | GGGAGTCCACTGAGCTCAACTCAGGCCCAAGTATTTTTGGTGGGTGAGTATCCCCTCATTCAGGTAGTCTaGCACATGCCAAGTATTGAT | + |
|
Preference number: 2 (lower is better) Translates to: GSPLSSTQAQVFLVGEYPLIQVV*HMPSID Trigger: ATCAATACTTGGCATGTGGCAGACTACCTGAATGAG...GGGATACTCACCCACCAAAAATACTTGGGCCTGAGTTGAGCTCAGTGGACTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR-3UTR CCA 90 bp | TCAACAACAAAAGAGGAAAAATCATCACAGTATGCCAGGGCCAGCAGATTGACCCACCAGTTTAGAAGGTaGGAAGCCAGACCTGCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: STTKEEKSSQYARASRLTHQFRR*EARPAQ Trigger: CTGGGCAGGTCTGGCTTCCCACCTTCTAAACTGGTG...GGTCAATCTGCTGGCCCTGGCATACTGTGATGATTTTTCCTCTTTTGTTGTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR-3UTR GCA 90 bp | GAGACAAGCCAGGAAGACAGAACCTACCTTCTCTTGTGGGCTCTCCACTTCACAGCTCACATGGCTAATTaGATGAAACTCCAGGGAATT | + |
|
Preference number: 2 (lower is better) Translates to: ETSQEDRTYLLLWALHFTAHMAN*MKLQGI Trigger: AATTCCCTGGAGTTTCATGCAATTAGCCATGTGAGC...TGTGAAGTGGAGAGCCCACAAGAGAAGGTAGGTTCTGTCTTCCTGGCTTGTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR-3UTR CCA 90 bp | GAGACAAGCCAGGAAGACAGAACCTACCTTCTCTTGTGGGCTCTCCACTTCACACCCAAGTATTTTTGGTaGGTGAGTATCCCCATGTTT | + |
|
Preference number: 2 (lower is better) Translates to: ETSQEDRTYLLLWALHFTPKYFW*VSIPMF Trigger: AAACATGGGGATACTCACCCACCAAAAATACTTGGG...TGTGAAGTGGAGAGCCCACAAGAGAAGGTAGGTTCTGTCTTCCTGGCTTGTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR-3UTR TCA 90 bp | ACAGAGGTTGTAACTCTGGGAAAGATGAAGGTGTGGGGTGCACAGTCAGGGAGAGACAATAAGATCTCATaGTGGCACATAAGAGTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: TEVVTLGKMKVWGAQSGRDNKIS*WHIRVL Trigger: CAGAACTCTTATGTGCCATCATGAGATCTTATTGTC...TCTCCCTGACTGTGCACCCCACACCTTCATCTTTCCCAGAGTTACAACCTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR-3UTR TCA 90 bp | ACAGAGGTTGTAACTCTGGGAAAGATGAAGGTGTGGGGTGCACAGTCAGGGAGAACATGGCTAATTGCATaGAACTCCAGGGAATTCAAT | + |
|
Preference number: 2 (lower is better) Translates to: TEVVTLGKMKVWGAQSGRTWLIA*NSREFN Trigger: ATTGAATTCCCTGGAGTTTCATGCAATTAGCCATGT...TCTCCCTGACTGTGCACCCCACACCTTCATCTTTCCCAGAGTTACAACCTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR-3UTR GCA 90 bp | ACAGAGGTTGTAACTCTGGGAAAGATGAAGGTGTGGGGTGCACAGTCAGGGAGAATCTCTATCAGAAGCTaGCAGCAGATCAGATCTTTA | + |
|
Preference number: 2 (lower is better) Translates to: TEVVTLGKMKVWGAQSGRISIRS*QQIRSL Trigger: TAAAGATCTGATCTGCTGGCAGCTTCTGATAGAGAT...TCTCCCTGACTGTGCACCCCACACCTTCATCTTTCCCAGAGTTACAACCTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR-3UTR CCA 90 bp | ACAGAGGTTGTAACTCTGGGAAAGATGAAGGTGTGGGGTGCACAGTCAGGGAGAGGGGAATTGCATCACTaGAATGAGAATTTAGTCACT | + |
|
Preference number: 2 (lower is better) Translates to: TEVVTLGKMKVWGAQSGRGELHH*NENLVT Trigger: AGTGACTAAATTCTCATTCCAGTGATGCAATTCCCC...TCTCCCTGACTGTGCACCCCACACCTTCATCTTTCCCAGAGTTACAACCTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR CAA 90 bp | GTAAACCCCATGCTCAGGGAATTGAGACTTATTTGCTCAGCTAAATaGATACACTCCTGTAATCCAAGCTCTCTGAAGGCTGAGGCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: VNPMLRELRLICSAK*IHSCNPSSLKAEAG Trigger: TCCTGCCTCAGCCTTCAGAGAGCTTGGATTACAGGAGTGTATCAATTTAGCTGAGCAAATAAGTCTCAATTCCCTGAGCATGGGGTTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR-3UTR TCA 90 bp | TCAACAACAAAAGAGGAAAAATCATCACAGTATGCCAGGGCCAGCAGATTGACCAAAAGCAAGAAAGGGTaGCATGGTGAGACAGGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: STTKEEKSSQYARASRLTKSKKG*HGETGS Trigger: TGACCCTGTCTCACCATGTCACCCTTTCTTGCTTTT...GGTCAATCTGCTGGCCCTGGCATACTGTGATGATTTTTCCTCTTTTGTTGTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR-3UTR GCA 90 bp | GAGACAAGCCAGGAAGACAGAACCTACCTTCTCTTGTGGGCTCTCCACTTCACAAACATGGTGTCACAATaGCATGACAATAAGATCTCA | + |
|
Preference number: 2 (lower is better) Translates to: ETSQEDRTYLLLWALHFTNMVSQ*HDNKIS Trigger: TGAGATCTTATTGTCATGGCATTGTGACACCATGTT...TGTGAAGTGGAGAGCCCACAAGAGAAGGTAGGTTCTGTCTTCCTGGCTTGTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR-3UTR GCA 90 bp | TCAACAACAAAAGAGGAAAAATCATCACAGTATGCCAGGGCCAGCAGATTGACCTGTTTTCCATCCCTGTaGTTAGCAGTTCCCCAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: STTKEEKSSQYARASRLTCFPSL*LAVPQS Trigger: AGACTGGGGAACTGCTAAGCACAGGGATGGAAAACA...GGTCAATCTGCTGGCCCTGGCATACTGTGATGATTTTTCCTCTTTTGTTGTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR-3UTR CCA 90 bp | GAGACAAGCCAGGAAGACAGAACCTACCTTCTCTTGTGGGCTCTCCACTTCACAATCAGATCTTTAACATaGTGTCACAATGCCATGACA | + |
|
Preference number: 2 (lower is better) Translates to: ETSQEDRTYLLLWALHFTIRSLT*CHNAMT Trigger: TGTCATGGCATTGTGACACCATGTTAAAGATCTGAT...TGTGAAGTGGAGAGCCCACAAGAGAAGGTAGGTTCTGTCTTCCTGGCTTGTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR-3UTR CCA 90 bp | GAGACAAGCCAGGAAGACAGAACCTACCTTCTCTTGTGGGCTCTCCACTTCACACATTCGGAGTCAAGGTaGTATAGAAAATTAAAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: ETSQEDRTYLLLWALHFTHSESR*YRKLKG Trigger: GCCTTTTAATTTTCTATACCACCTTGACTCCGAATG...TGTGAAGTGGAGAGCCCACAAGAGAAGGTAGGTTCTGTCTTCCTGGCTTGTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR-3UTR TCA 90 bp | TCAACAACAAAAGAGGAAAAATCATCACAGTATGCCAGGGCCAGCAGATTGACCCCAGTCACTGCCATATaGAATGGCATGTTTAGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: STTKEEKSSQYARASRLTPVTAI*NGMFSD Trigger: GTCACTAAACATGCCATTTCATATGGCAGTGACTGG...GGTCAATCTGCTGGCCCTGGCATACTGTGATGATTTTTCCTCTTTTGTTGTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR-3UTR CCA 90 bp | TCACTGCCATATGAAATGGCATGTTTAGTGACAAGTCACATAGCTAGCAGAAATATGATGGAGAGGGACTaGGTGCTTGGCAGCCTTAGA | + |
|
Preference number: 2 (lower is better) Translates to: SLPYEMACLVTSHIASRNMMERD*VLGSLR Trigger: TCTAAGGCTGCCAAGCACCCAGTCCCTCTCCATCAT...ATTTCTGCTAGCTATGTGACTTGTCACTAAACATGCCATTTCATATGGCAGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR CAA 90 bp | ATGCAACGCAACTACCCACTTTGGGTAAACCCCATGCTCAGGGAATaGAGACTTATTTGCTCAGCTAAATTGATACACTCCTGTAATCCA | + |
|
Preference number: 2 (lower is better) Translates to: MQRNYPLWVNPMLRE*RLICSAKLIHSCNP Trigger: TGGATTACAGGAGTGTATCAATTTAGCTGAGCAAATAAGTCTCAATTCCCTGAGCATGGGGTTTACCCAAAGTGGGTAGTTGCGTTGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR TCA 72 bp | AAGCCAGACCTGCCCAGGAGCCTGCACCAGTCAGCATaGAGCCGGGCCCAGAGTGCCATTCAGAGAGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: KPDLPRSLHQSA*SRAQSAIQRAL Trigger: CAGGGCTCTCTGAATGGCACTCTGGGCCCGGCTTCATGCTGACTGGTGCAGGCTCCTGGGCAGGTCTGGCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR GCA 72 bp | TCCAAGACAGGGGGCAAGGAGAGGGACCAGGCATGGTaGCTGGGTGAAGCTGGAGTGCATGAGTCACCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: SKTGGKERDQAW*LGEAGVHESPQ Trigger: TTGGGGTGACTCATGCACTCCAGCTTCACCCAGGCACCATGCCTGGTCCCTCTCCTTGCCCCCTGTCTTGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR CCA 72 bp | AGACAGGGGGCAAGGAGAGGGACCAGGCATGGTGCCTaGGTGAAGCTGGAGTGCATGAGTCACCCCAACATT | + |
|
Preference number: 3 (lower is better) Translates to: RQGARRGTRHGA*VKLECMSHPNI Trigger: AATGTTGGGGTGACTCATGCACTCCAGCTTCACCCAGGCACCATGCCTGGTCCCTCTCCTTGCCCCCTGTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR-3UTR CAA 90 bp | GGGAGTCCACTGAGCTCAACTCAGGCCCAAGTATTTTTGGTGGGTGAGTATCCCGGAGGGAGTGGAGTGTaGCTGCTGTGTCTGGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: GSPLSSTQAQVFLVGEYPGGSGV*LLCLAS Trigger: GCTGGCCAGACACAGCAGCAACACTCCACTCCCTCC...GGGATACTCACCCACCAAAAATACTTGGGCCTGAGTTGAGCTCAGTGGACTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR-3UTR CAA 90 bp | AGGTCCAAACAGGAAGCCAGGGGTCAGAGTCTGGGGCTTCTTTGTCTGCCTCACAGAGGGACTGGGTGCTaGGCAGCCTTAGAGGGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: RSKQEARGQSLGLLCLPHRGTGC*AALEGV Trigger: AACTCCCTCTAAGGCTGCCAAGCACCCAGTCCCTCT...GTGAGGCAGACAAAGAAGCCCCAGACTCTGACCCCTGGCTTCCTGTTTGGACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR-3UTR CAA 90 bp | AGGTCCAAACAGGAAGCCAGGGGTCAGAGTCTGGGGCTTCTTTGTCTGCCTCACTGCCAAGGAAGAGGTTaGGGCTCTACCTTGGGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: RSKQEARGQSLGLLCLPHCQGRG*GSTLGQ Trigger: CTGGCCCAAGGTAGAGCCCAAACCTCTTCCTTGGCA...GTGAGGCAGACAAAGAAGCCCCAGACTCTGACCCCTGGCTTCCTGTTTGGACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR CCA 72 bp | TGCTCCAAAGGCTTGGCTTCTGAGAGCTGGAGGGAGTaGAGTGTTGCTGCTGTGTCTGGCCAGCAGATGGGT | + |
|
Preference number: 3 (lower is better) Translates to: CSKGLASESWRE*SVAAVSGQQMG Trigger: ACCCATCTGCTGGCCAGACACAGCAGCAACACTCCACTCCCTCCAGCTCTCAGAAGCCAAGCCTTTGGAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR CCA 72 bp | CAACTGGGCCCCTTGTCCATCGCCTTCAGACACAGATaGTTCAGTTGTGGGGTAGGTGCTAGGGCTGAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: QLGPLSIAFRHR*FSCGVGARAED Trigger: GTCCTCAGCCCTAGCACCTACCCCACAACTGAACCATCTGTGTCTGAAGGCGATGGACAAGGGGCCCAGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR CCA 72 bp | GGAAGATCAGCAGGTGACAACCACCAGTTTAGAAGGTaGGAAGCCAGACCTGCCCAGGAGCCTGCACCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: GRSAGDNHQFRR*EARPAQEPAPV Trigger: GACTGGTGCAGGCTCCTGGGCAGGTCTGGCTTCCCACCTTCTAAACTGGTGGTTGTCACCTGCTGATCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR TCA 72 bp | ACACAGGGCTGTGCCCTGGTGAGGAAAAAGGACCTCTaGACCTTGATGTCAGCATTGGGCTCTCCACCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: TQGCALVRKKDL*TLMSALGSPPW Trigger: CCAGGGTGGAGAGCCCAATGCTGACATCAAGGTTCAGAGGTCCTTTTTCCTCACCAGGGCACAGCCCTGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR CCA 72 bp | TTGAAGAGGTGCTCCAAAGGCTTGGCTTCTGAGAGCTaGAGGGAGTGGAGTGTTGCTGCTGTGTCTGGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LKRCSKGLASES*REWSVAAVSGQ Trigger: CTGGCCAGACACAGCAGCAACACTCCACTCCCTCCAGCTCTCAGAAGCCAAGCCTTTGGAGCACCTCTTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR CCA 72 bp | AGACCCCAAAGCCAGCGGGCTCCCTGCAAAGGATCATaGCACTCAGGTATGCAGTCAACCCCCAATGTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: RPQSQRAPCKGS*HSGMQSTPNVA Trigger: TGCTACATTGGGGGTTGACTGCATACCTGAGTGCCATGATCCTTTGCAGGGAGCCCGCTGGCTTTGGGGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR-3UTR CAA 90 bp | AGGTCCAAACAGGAAGCCAGGGGTCAGAGTCTGGGGCTTCTTTGTCTGCCTCACAAGGTGACCCCAATCTaGTCCCTCTCTTACAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: RSKQEARGQSLGLLCLPHKVTPI*SLSYRA Trigger: GGCTCTGTAAGAGAGGGACAAGATTGGGGTCACCTT...GTGAGGCAGACAAAGAAGCCCCAGACTCTGACCCCTGGCTTCCTGTTTGGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR TCA 72 bp | CGAGGTTTTGAAGAGGTGCTCCAAAGGCTTGGCTTCTaGGAGCTGGAGGGAGTGGAGTGTTGCTGCTGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: RGFEEVLQRLGF*ELEGVECCCCV Trigger: GACACAGCAGCAACACTCCACTCCCTCCAGCTCTCAGAAGCCAAGCCTTTGGAGCACCTCTTCAAAACCTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR GCA 72 bp | AAGGGTGACATGGTGAGACAGGGTCACATTCTCCGATaGCAAGGAAGAGGTTTGGGCTCTACCTTGGGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: KGDMVRQGHILR*QGRGLGSTLGQ Trigger: CTGGCCCAAGGTAGAGCCCAAACCTCTTCCTTGGCATCGGAGAATGTGACCCTGTCTCACCATGTCACCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR GCA 72 bp | ATTGATCTGGGAAGACCCCAAAGCCAGCGGGCTCCCTaGAAAGGATCATGGCACTCAGGTATGCAGTCAACC | + |
|
Preference number: 3 (lower is better) Translates to: IDLGRPQSQRAP*KGSWHSGMQST Trigger: GGTTGACTGCATACCTGAGTGCCATGATCCTTTGCAGGGAGCCCGCTGGCTTTGGGGTCTTCCCAGATCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR GCA 72 bp | TGTGAGCAGAGCACTAGCAGGACTAGGCTTTCTGACTaGACCCAGACAGCCCCTGCCCTGCATTTCCATTGT | + |
|
Preference number: 3 (lower is better) Translates to: CEQSTSRTRLSD*TQTAPALHFHC Trigger: ACAATGGAAATGCAGGGCAGGGGCTGTCTGGGTGCAGTCAGAAAGCCTAGTCCTGCTAGTGCTCTGCTCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR CCA 72 bp | GACAGGGTCACATTCTCCGATGCCAAGGAAGAGGTTTaGGCTCTACCTTGGGCCAGGGGTTTTCTAGCCCTA | + |
|
Preference number: 3 (lower is better) Translates to: DRVTFSDAKEEV*ALPWARGFLAL Trigger: TAGGGCTAGAAAACCCCTGGCCCAAGGTAGAGCCCAAACCTCTTCCTTGGCATCGGAGAATGTGACCCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR CCA 72 bp | CTCGGAGGTCCAAACAGGAAGCCAGGGGTCAGAGTCTaGGGCTTCTTTGTCTGCCTCACTGGAAGTACACAA | + |
|
Preference number: 3 (lower is better) Translates to: LGGPNRKPGVRV*GFFVCLTGSTQ Trigger: TTGTGTACTTCCAGTGAGGCAGACAAAGAAGCCCCAGACTCTGACCCCTGGCTTCCTGTTTGGACCTCCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR CCA 72 bp | TGCATTGTGAAGAGCTGTAGGCCCCTCAAGGCCCTCTaGGAGTCCACTGAGCTCAACTCAGGCCCAAGTATT | + |
|
Preference number: 3 (lower is better) Translates to: CIVKSCRPLKAL*ESTELNSGPSI Trigger: AATACTTGGGCCTGAGTTGAGCTCAGTGGACTCCCAGAGGGCCTTGAGGGGCCTACAGCTCTTCACAATGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR-3UTR CAA 90 bp | ACAGAGGTTGTAACTCTGGGAAAGATGAAGGTGTGGGGTGCACAGTCAGGGAGAAGGTGCTCCAAAGGCTaGGCTTCTGAGAGCTGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: TEVVTLGKMKVWGAQSGRRCSKG*ASESWR Trigger: CCTCCAGCTCTCAGAAGCCAAGCCTTTGGAGCACCT...TCTCCCTGACTGTGCACCCCACACCTTCATCTTTCCCAGAGTTACAACCTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR-3UTR CAA 90 bp | GAGACAAGCCAGGAAGACAGAACCTACCTTCTCTTGTGGGCTCTCCACTTCACAGGTTTGGGCTCTACCTaGGGCCAGGGGTTTTCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: ETSQEDRTYLLLWALHFTGLGST*GQGFSS Trigger: GCTAGAAAACCCCTGGCCCAAGGTAGAGCCCAAACC...TGTGAAGTGGAGAGCCCACAAGAGAAGGTAGGTTCTGTCTTCCTGGCTTGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR TCA 72 bp | AGATCTCATTCAGGTAGTCTGCCACATGCCAAGTATTaGTCTGGGAAGACCCCAAAGCCAGCGGGCTCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: RSHSGSLPHAKY*SGKTPKPAGSL Trigger: CAGGGAGCCCGCTGGCTTTGGGGTCTTCCCAGATCAATACTTGGCATGTGGCAGACTACCTGAATGAGATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR TCA 72 bp | CTTCTCTTGTGGGCTCTCCACTTCACAGGTAGCAGGTaGAGACTCCAAGAGACCTGTGAGCAGAGCACTAGC | + |
|
Preference number: 3 (lower is better) Translates to: LLLWALHFTGSR*RLQETCEQSTS Trigger: GCTAGTGCTCTGCTCACAGGTCTCTTGGAGTCTTCACCTGCTACCTGTGAAGTGGAGAGCCCACAAGAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR CCA 72 bp | CTCAAAGCCTACAAGGAGAGGACTTGTAATCACCATTaGGGCTGTCCTCGGAGGTCCAAACAGGAAGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LKAYKERTCNHH*GCPRRSKQEAR Trigger: CCTGGCTTCCTGTTTGGACCTCCGAGGACAGCCCCAATGGTGATTACAAGTCCTCTCCTTGTAGGCTTTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR TCA 72 bp | GTCCAAGTCTCATTCATAGGCCAGCTAAGGGCACAGTaGCAGGTTTTTGGAGCCTCCCCCTCACTACATGAC | + |
|
Preference number: 3 (lower is better) Translates to: VQVSFIGQLRAQ*QVFGASPSLHD Trigger: GTCATGTAGTGAGGGGGAGGCTCCAAAAACCTGTCACTGTGCCCTTAGCTGGCCTATGAATGAGACTTGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR GCA 72 bp | AGAGGGACCAGGCATGGTGCCTGGGTGAAGCTGGAGTaGATGAGTCACCCCAACATTGACTCATATCTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: RGTRHGAWVKLE*MSHPNIDSYLY Trigger: ATAGAGATATGAGTCAATGTTGGGGTGACTCATGCACTCCAGCTTCACCCAGGCACCATGCCTGGTCCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR GCA 72 bp | AGAGGTTGTAACTCTGGGAAAGATGAAGGTGTGGGGTaGACAGTCAGGGAGACAAGCCAGGAAGACAGAACC | + |
|
Preference number: 3 (lower is better) Translates to: RGCNSGKDEGVG*TVRETSQEDRT Trigger: GGTTCTGTCTTCCTGGCTTGTCTCCCTGACTGTGCACCCCACACCTTCATCTTTCCCAGAGTTACAACCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR CCA 72 bp | TTCTCCGATGCCAAGGAAGAGGTTTGGGCTCTACCTTaGGCCAGGGGTTTTCTAGCCCTACTGATCAGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: FSDAKEEVWALP*ARGFLALLISQ Trigger: TTGACTGATCAGTAGGGCTAGAAAACCCCTGGCCCAAGGTAGAGCCCAAACCTCTTCCTTGGCATCGGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR TCA 72 bp | GTGAGGCATTTCAACCCCTTCTCACCTCTGATACAGTaGCAGACAAGGGACAGTCTGGCTTCAGAGAAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: VRHFNPFSPLIQ*QTRDSLASEKS Trigger: GGACTTCTCTGAAGCCAGACTGTCCCTTGTCTGTCACTGTATCAGAGGTGAGAAGGGGTTGAAATGCCTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR TCA 72 bp | GGTTCTGCAGTAGCTGGCTCAAGGAAAAGCAGGGATTaGTTAGCAATGCCTGGCATAGCAACCAGGGGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: GSAVAGSRKSRD*LAMPGIATRGK Trigger: TTTGCCCCTGGTTGCTATGCCAGGCATTGCTAATCAATCCCTGCTTTTCCTTGAGCCAGCTACTGCAGAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR GCA 72 bp | GCCTTAGAGGGAGTTCAAAGCCAGGACTTACATTCCTaGCTGTTCTCCTGTCCTTGTGAGGCATTTCAACCC | + |
|
Preference number: 3 (lower is better) Translates to: ALEGVQSQDLHS*LFSCPCEAFQP Trigger: GGGTTGAAATGCCTCACAAGGACAGGAGAACAGGCAGGAATGTAAGTCCTGGCTTTGAACTCCCTCTAAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR CCA 72 bp | AGGGGTCAGAGTCTGGGGCTTCTTTGTCTGCCTCACTaGAAGTACACAAGAATAGCTTCTGCCTGCAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: RGQSLGLLCLPH*KYTRIASACKN Trigger: GTTCTTGCAGGCAGAAGCTATTCTTGTGTACTTCCAGTGAGGCAGACAAAGAAGCCCCAGACTCTGACCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR TCA 72 bp | AGAACTGGAATCAGAGGAAGACACAGAGCGCTGGACTaGGCTCACATGGCTAATTGCATGAAACTCCAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: RTGIRGRHRALD*AHMANCMKLQG Trigger: TCCCTGGAGTTTCATGCAATTAGCCATGTGAGCTCAGTCCAGCGCTCTGTGTCTTCCTCTGATTCCAGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR TCA 72 bp | ACAGTGACAGGTTTTTGGAGCCTCCCCCTCACTACATaGCTTAGTAGTCCCTGCATTGTGAAGAGCTGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: TVTGFWSLPLTT*LSSPCIVKSCR Trigger: CCTACAGCTCTTCACAATGCAGGGACTACTAAGTCATGTAGTGAGGGGGAGGCTCCAAAAACCTGTCACTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR CCA 72 bp | TTTAGTCACTACTGTGTCACAAGCACCAATAGCTCATaGCCTGGCCTAGAGGGGGTACATGAACAACAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: FSHYCVTSTNSS*PGLEGVHEQQG Trigger: TCCCTGTTGTTCATGTACCCCCTCTAGGCCAGGCCATGAGCTATTGGTGCTTGTGACACAGTAGTGACTAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGTGCCATCCCATTTGGTGATATATGCCTAGGTGATAAGACTGTCCAGAGCTCTTCTTTCGAGGTTTaGAAGAGGTGCTCCAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: GSAIPFGDICLGDKTVQSSSFEV*KRCSKG Trigger: GCCTTTGGAGCACCTCTTCAAAACCTCGAAAGAAGA...GCTCTGGACAGTCTTATCACCTAGGCATATATCACCAAATGGGATGGCACTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR CCA 72 bp | ACCCAAAGCGACGTGTTTAAAAGGTTCTGCAGTAGCTaGCTCAAGGAAAAGCAGGGATTGATTAGCAATGCC | + |
|
Preference number: 3 (lower is better) Translates to: TQSDVFKRFCSS*LKEKQGLISNA Trigger: GGCATTGCTAATCAATCCCTGCTTTTCCTTGAGCCAGCTACTGCAGAACCTTTTAAACACGTCGCTTTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR TCA 72 bp | AAGGCTTGTGTGGAAAATGAACTGGTAAACAGATGCTaGCAACAGAAGGGAGCCTGTTGGGGAGATTCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: KACVENELVNRC*QQKGACWGDSK Trigger: CTTAGAATCTCCCCAACAGGCTCCCTTCTGTTGTCAGCATCTGTTTACCAGTTCATTTTCCACACAAGCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR TCA 72 bp | ATATGCCTAGGTGATAAGACTGTCCAGAGCAGTCTGTaGAAGAGCACAAATAGACATGCACGTGTACACATG | + |
|
Preference number: 3 (lower is better) Translates to: ICLGDKTVQSSL*KSTNRHARVHM Trigger: CATGTGTACACGTGCATGTCTATTTGTGCTCTTTCACAGACTGCTCTGGACAGTCTTATCACCTAGGCATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR CCA 72 bp | TCTATCAGAAGCTGCCAGCAGATCAGATCTTTAACATaGTGTCACAATGCCATGACAATAAGATCTCATGAT | + |
|
Preference number: 3 (lower is better) Translates to: SIRSCQQIRSLT*CHNAMTIRSHD Trigger: ATCATGAGATCTTATTGTCATGGCATTGTGACACCATGTTAAAGATCTGATCTGCTGGCAGCTTCTGATAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| CDS-3UTR CCA 90 bp | AGGTCCAAACAGGAAGCCAGGGGTCAGAGTCTGGGGCTTCTTTGTCTGCCTCACTGTACTTCTTGTCTCTaGTCTTCATGGTCACAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RSKQEARGQSLGLLCLPHCTSCL*SSWSQG Trigger: TCCCTGTGACCATGAAGACCAGAGACAAGAAGTACA...GTGAGGCAGACAAAGAAGCCCCAGACTCTGACCCCTGGCTTCCTGTTTGGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| CDS-3UTR CCA 90 bp | GGGTGTCAGAGTAAGGTAACTATGCCTGAATGTGGGCCAGATTCCAGGGCTCCATGTCTCTGGTCTTCATaGTCACAGGGATCAGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GCQSKVTMPECGPDSRAPCLWSS*SQGSAK Trigger: CTTTGCTGATCCCTGTGACCATGAAGACCAGAGACA...TGGAGCCCTGGAATCTGGCCCACATTCAGGCATAGTTACCTTACTCTGACACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| CDS-3UTR TCA 90 bp | GGGAGTCCACTGAGCTCAACTCAGGCCCAAGTATTTTTGGTGGGTGAGTATCCCGATCTAGCTCTGTGCTaGTCAGAGAAACATGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GSPLSSTQAQVFLVGEYPDLALC*SEKHEN Trigger: ATTCTCATGTTTCTCTGATCAGCACAGAGCTAGATC...GGGATACTCACCCACCAAAAATACTTGGGCCTGAGTTGAGCTCAGTGGACTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR CAA 72 bp | GAGGAAAAATCATCACAGTATGCCAGGGCCAGCAGATaGACCGTAGTGACCCAAAGCGACGTGTTTAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EEKSSQYARASR*TVVTQSDVFKR Trigger: CCTTTTAAACACGTCGCTTTGGGTCACTACGGTCAATCTGCTGGCCCTGGCATACTGTGATGATTTTTCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| 3UTR CAA 72 bp | AACTACCCACTTTGGGTAAACCCCATGCTCAGGGAATaGAGACTTATTTGCTCAGCTAAATTGATACACTCC | + |
|
Preference number: 4 (lower is better) Translates to: NYPLWVNPMLRE*RLICSAKLIHS Trigger: GGAGTGTATCAATTTAGCTGAGCAAATAAGTCTCAATTCCCTGAGCATGGGGTTTACCCAAAGTGGGTAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127433.7 |
||
| CDS GCA 90 bp | GGCTTGGGGGTCTCCCCATCGTCGTCCTCACTGCTGGAGTTCTCCTaGTTCACAATGCGGTTGTTCTGGCGGCTGAACCTGCGTGCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: GLGVSPSSSSLLEFS*FTMRLFWRLNLRAL Trigger: TAAGGCACGCAGGTTCAGCCGCCAGAACAACCGCATTGTGAAGCAGGAGAACTCCAGCAGTGAGGACGACGATGGGGAGACCCCCAAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
||
| CDS GCA 90 bp | AGGGCAGGCTTTTCTGCTGTCTTTGGGCTTCACGGGGCCCTGGCTTaGCTGGACCTTCTTGATCTTCTTGCTGGCTACTGGCAGGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RAGFSAVFGLHGALA*LDLLDLLAGYWQAR Trigger: TCTGGCCTGCCAGTAGCCAGCAAGAAGATCAAGAAGGTCCAGGCAAGCCAGGGCCCCGTGAAGCCCAAAGACAGCAGAAAAGCCTGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
||
| CDS CCA 90 bp | GGGGCCCTGGCTTGCCTGGACCTTCTTGATCTTCTTGCTGGCTACTaGCAGGCCAGAAGACTGGCCAGTAGGTGTCCATGTGTAGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GALACLDLLDLLAGY*QARRLASRCPCVVS Trigger: AGAGACTACACATGGACACCTACTGGCCAGTCTTCTGGCCTGCCAGTAGCCAGCAAGAAGATCAAGAAGGTCCAGGCAAGCCAGGGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
||
| CDS CCA 90 bp | GAGTCATCCCTCGCCACAGTTGAGCCAGATCCTTGGTGGCAGCTGTaGATGCAGTTCCAGGACAGGCTCGGATGTACTGCTTCCGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ESSLATVEPDPWWQL*MQFQDRLGCTASGS Trigger: TGAACCGGAAGCAGTACATCCGAGCCTGTCCTGGAACTGCATCCACAGCTGCCACCAAGGATCTGGCTCAACTGTGGCGAGGGATGACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
||
| CDS TCA 90 bp | CAGCACCTTGACATTCTCACTCAGCGACAGGTAGCAGTGGTCCAGTaGGACAGAGGACTGGAAGTTAGGTGGGCCTGTGGGGCCTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: QHLDILTQRQVAVVQ*DRGLEVRWACGAFR Trigger: TCTGAAGGCCCCACAGGCCCACCTAACTTCCAGTCCTCTGTCTCACTGGACCACTGCTACCTGTCGCTGAGTGAGAATGTCAAGGTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
||
| CDS CCA 90 bp | TTTCCTCCAGAGTCATCCCTCGCCACAGTTGAGCCAGATCCTTGGTaGCAGCTGTGGATGCAGTTCCAGGACAGGCTCGGATGTACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: FPPESSLATVEPDPW*QLWMQFQDRLGCTA Trigger: AGCAGTACATCCGAGCCTGTCCTGGAACTGCATCCACAGCTGCCACCAAGGATCTGGCTCAACTGTGGCGAGGGATGACTCTGGAGGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
||
| CDS CCA 90 bp | CCAAAGACACTTGGGCCTTCTCAGCTAATAGCTGGTAGAAGGGCTTaGGGGTCTCCCCATCGTCGTCCTCACTGCTGGAGTTCTCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PKTLGPSQLIAGRRA*GSPHRRPHCWSSPA Trigger: AGCAGGAGAACTCCAGCAGTGAGGACGACGATGGGGAGACCCCCAAGCCCTTCTACCAGCTATTAGCTGAGAAGGCCCAAGTGTCTTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
||
| CDS CCA 90 bp | TTGAAGAGGTGCTCCAAAGGCTTGGCTTCTGAGAGCTGGAGGGAGTaGAGTGTTGCTGCTGTGTCTGGCCAGCAGATGGGTTCAAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: LKRCSKGLASESWRE*SVAAVSGQQMGSNL Trigger: CAGGTTTGAACCCATCTGCTGGCCAGACACAGCAGCAACACTCCACTCCCTCCAGCTCTCAGAAGCCAAGCCTTTGGAGCACCTCTTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
||
| CDS CCA 90 bp | TCTTTTCCTCCAGAGTCATCCCTCGCCACAGTTGAGCCAGATCCTTaGTGGCAGCTGTGGATGCAGTTCCAGGACAGGCTCGGATGTACT | + |
|
Preference number: 5 (lower is better) Translates to: SFPPESSLATVEPDP*WQLWMQFQDRLGCT Trigger: AGTACATCCGAGCCTGTCCTGGAACTGCATCCACAGCTGCCACCAAGGATCTGGCTCAACTGTGGCGAGGGATGACTCTGGAGGAAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
||
| CDS TCA 90 bp | GTGCAGTATGGTTTCTTTTCCTCCAGAGTCATCCCTCGCCACAGTTaGGCCAGATCCTTGGTGGCAGCTGTGGATGCAGTTCCAGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: VQYGFFSSRVIPRHS*ARSLVAAVDAVPGQ Trigger: CTGTCCTGGAACTGCATCCACAGCTGCCACCAAGGATCTGGCTCAACTGTGGCGAGGGATGACTCTGGAGGAAAAGAAACCATACTGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
||
| CDS CCA 90 bp | AATGCGGTTGTTCTGGCGGCTGAACCTGCGTGCCTTAGTGCAGTATaGTTTCTTTTCCTCCAGAGTCATCCCTCGCCACAGTTGAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: NAVVLAAEPACLSAV*FLFLQSHPSPQLSQ Trigger: CTGGCTCAACTGTGGCGAGGGATGACTCTGGAGGAAAAGAAACCATACTGCACTAAGGCACGCAGGTTCAGCCGCCAGAACAACCGCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
||
| CDS TCA 90 bp | CAAGAACTGACACAGGGCTGTGCCCTGGTGAGGAAAAAGGACCTCTaGACCTTGATGTCAGCATTGGGCTCTCCACCCTGGACTTCTACA | + |
|
Preference number: 5 (lower is better) Translates to: QELTQGCALVRKKDL*TLMSALGSPPWTST Trigger: TGTAGAAGTCCAGGGTGGAGAGCCCAATGCTGACATCAAGGTTCAGAGGTCCTTTTTCCTCACCAGGGCACAGCCCTGTGTCAGTTCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
||
| CDS GCA 90 bp | GTTCTCCTGCTTCACAATGCGGTTGTTCTGGCGGCTGAACCTGCGTaGCTTAGTGCAGTATGGTTTCTTTTCCTCCAGAGTCATCCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: VLLLHNAVVLAAEPA*LSAVWFLFLQSHPS Trigger: CGAGGGATGACTCTGGAGGAAAAGAAACCATACTGCACTAAGGCACGCAGGTTCAGCCGCCAGAACAACCGCATTGTGAAGCAGGAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
||
| CDS CCA 90 bp | TCGTCCTCACTGCTGGAGTTCTCCTGCTTCACAATGCGGTTGTTCTaGCGGCTGAACCTGCGTGCCTTAGTGCAGTATGGTTTCTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSSLLEFSCFTMRLF*RLNLRALVQYGFFS Trigger: GGAAAAGAAACCATACTGCACTAAGGCACGCAGGTTCAGCCGCCAGAACAACCGCATTGTGAAGCAGGAGAACTCCAGCAGTGAGGACGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
||
| CDS GCA 90 bp | GGGGCTTCTTTGTCTGCCTCACTGGAAGTACACAAGAATAGCTTCTaGCTGCAAGAACTGACACAGGGCTGTGCCCTGGTGAGGAAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: GASLSASLEVHKNSF*LQELTQGCALVRKK Trigger: CTTTTTCCTCACCAGGGCACAGCCCTGTGTCAGTTCTTGCAGGCAGAAGCTATTCTTGTGTACTTCCAGTGAGGCAGACAAAGAAGCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
||
| CDS CCA 90 bp | GCAGGACACGCAACAGGATCTCCTTCTTGGTGTACTTCTTGTCTCTaGTCTTCATGGTCACAGGGATCAGCAAAGCCAGCTCTCGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: AGHATGSPSWCTSCL*SSWSQGSAKPALEA Trigger: AGCTTCGAGAGCTGGCTTTGCTGATCCCTGTGACCATGAAGACCAGAGACAAGAAGTACACCAAGAAGGAGATCCTGTTGCGTGTCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
||
| CDS CCA 90 bp | GGGTTCAAACCTGGCCCCACAAATCTACCTTTGCCATTGCTGCTGTaGAGCTTGAGCAAGGCCTTGGTCATGTCAATGTTTCTCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GFKPGPTNLPLPLLL*SLSKALVMSMFLWR Trigger: CCTCCAGAGAAACATTGACATGACCAAGGCCTTGCTCAAGCTCCACAGCAGCAATGGCAAAGGTAGATTTGTGGGGCCAGGTTTGAACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
||
| CDS TCA 90 bp | AACCTGGCCCCACAAATCTACCTTTGCCATTGCTGCTGTGGAGCTTaGGCAAGGCCTTGGTCATGTCAATGTTTCTCTGGAGGTACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: NLAPQIYLCHCCCGA*ARPWSCQCFSGGTG Trigger: TCCAGTACCTCCAGAGAAACATTGACATGACCAAGGCCTTGCTCAAGCTCCACAGCAGCAATGGCAAAGGTAGATTTGTGGGGCCAGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
||
| CDS CCA 90 bp | GGAGGTACTGGATGTAGTGCAGGACACGCAACAGGATCTCCTTCTTaGTGTACTTCTTGTCTCTGGTCTTCATGGTCACAGGGATCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GGTGCSAGHATGSPS*CTSCLWSSWSQGSA Trigger: TGCTGATCCCTGTGACCATGAAGACCAGAGACAAGAAGTACACCAAGAAGGAGATCCTGTTGCGTGTCCTGCACTACATCCAGTACCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
||
| CDS CCA 90 bp | ATGGTCACAGGGATCAGCAAAGCCAGCTCTCGAAGCTTGTTCGTGTaGTTTTTCTTATCCTTCCTGTCAGTAGGACTTGGAGATCTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: MVTGISKASSRSLFV*FFLSFLSVGLGDLA Trigger: AGCTAGATCTCCAAGTCCTACTGACAGGAAGGATAAGAAAAACCACACGAACAAGCTTCGAGAGCTGGCTTTGCTGATCCCTGTGACCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000127433.7 ENSMUST00000141380.3 |
||
| CDS CAA 72 bp | TTGATCTGGGAAGACCCCAAAGCCAGCGGGCTCCCATaGGGGCTGTCCTCGGAGGTCCAAACAGGAAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LIWEDPKASGLP*GLSSEVQTGSQ Trigger: CTGGCTTCCTGTTTGGACCTCCGAGGACAGCCCCAATGGGAGCCCGCTGGCTTTGGGGTCTTCCCAGATCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
||
| CDS TCA 72 bp | TGGGCTTCACGGGGCCCTGGCTTGCCTGGACCTTCTTaGTCTTCTTGCTGGCTACTGGCAGGCCAGAAGACT | + |
|
Preference number: 6 (lower is better) Translates to: WASRGPGLPGPS*SSCWLLAGQKT Trigger: AGTCTTCTGGCCTGCCAGTAGCCAGCAAGAAGATCAAGAAGGTCCAGGCAAGCCAGGGCCCCGTGAAGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
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| CDS CCA 72 bp | GAGTCATCCCTCGCCACAGTTGAGCCAGATCCTTGGTaGCAGCTGTGGATGCAGTTCCAGGACAGGCTCGGA | + |
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Preference number: 6 (lower is better) Translates to: ESSLATVEPDPW*QLWMQFQDRLG Trigger: TCCGAGCCTGTCCTGGAACTGCATCCACAGCTGCCACCAAGGATCTGGCTCAACTGTGGCGAGGGATGACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
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| CDS CCA 72 bp | AGGGCTTGGGGGTCTCCCCATCGTCGTCCTCACTGCTaGAGTTCTCCTGCTTCACAATGCGGTTGTTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: RAWGSPHRRPHC*SSPASQCGCSG Trigger: GCCAGAACAACCGCATTGTGAAGCAGGAGAACTCCAGCAGTGAGGACGACGATGGGGAGACCCCCAAGCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
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| CDS CAA 90 bp | CTGCTGTCTTTGGGCTTCACGGGGCCCTGGCTTGCCTGGACCTTCTaGATCTTCTTGCTGGCTACTGGCAGGCCAGAAGACTGGCCAGTA | + |
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Preference number: 6 (lower is better) Translates to: LLSLGFTGPWLAWTF*IFLLATGRPEDWPV Trigger: TACTGGCCAGTCTTCTGGCCTGCCAGTAGCCAGCAAGAAGATCAAGAAGGTCCAGGCAAGCCAGGGCCCCGTGAAGCCCAAAGACAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
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| CDS CCA 72 bp | CTCGCCACAGTTGAGCCAGATCCTTGGTGGCAGCTGTaGATGCAGTTCCAGGACAGGCTCGGATGTACTGCT | + |
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Preference number: 6 (lower is better) Translates to: LATVEPDPWWQL*MQFQDRLGCTA Trigger: AGCAGTACATCCGAGCCTGTCCTGGAACTGCATCCACAGCTGCCACCAAGGATCTGGCTCAACTGTGGCGAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
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| CDS CCA 72 bp | CTTGGGCCTTCTCAGCTAATAGCTGGTAGAAGGGCTTaGGGGTCTCCCCATCGTCGTCCTCACTGCTGGAGT | + |
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Preference number: 6 (lower is better) Translates to: LGPSQLIAGRRA*GSPHRRPHCWS Trigger: ACTCCAGCAGTGAGGACGACGATGGGGAGACCCCCAAGCCCTTCTACCAGCTATTAGCTGAGAAGGCCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
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| CDS TCA 72 bp | GACATTCTCACTCAGCGACAGGTAGCAGTGGTCCAGTaGGACAGAGGACTGGAAGTTAGGTGGGCCTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: DILTQRQVAVVQ*DRGLEVRWACG Trigger: CCCACAGGCCCACCTAACTTCCAGTCCTCTGTCTCACTGGACCACTGCTACCTGTCGCTGAGTGAGAATGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
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| CDS GCA 72 bp | AGAAGGGCTTGGGGGTCTCCCCATCGTCGTCCTCACTaGTGGAGTTCTCCTGCTTCACAATGCGGTTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: RRAWGSPHRRPH*WSSPASQCGCS Trigger: AGAACAACCGCATTGTGAAGCAGGAGAACTCCAGCAGTGAGGACGACGATGGGGAGACCCCCAAGCCCTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
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| CDS CCA 72 bp | CAGGCTTTTCTGCTGTCTTTGGGCTTCACGGGGCCCTaGCTTGCCTGGACCTTCTTGATCTTCTTGCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: QAFLLSLGFTGP*LAWTFLIFLLA Trigger: AGCCAGCAAGAAGATCAAGAAGGTCCAGGCAAGCCAGGGCCCCGTGAAGCCCAAAGACAGCAGAAAAGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
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| CDS CAA 72 bp | TCCTCACTGCTGGAGTTCTCCTGCTTCACAATGCGGTaGTTCTGGCGGCTGAACCTGCGTGCCTTAGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: SSLLEFSCFTMR*FWRLNLRALVQ Trigger: CTGCACTAAGGCACGCAGGTTCAGCCGCCAGAACAACCGCATTGTGAAGCAGGAGAACTCCAGCAGTGAGGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
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| CDS CAA 90 bp | CCATCGTCGTCCTCACTGCTGGAGTTCTCCTGCTTCACAATGCGGTaGTTCTGGCGGCTGAACCTGCGTGCCTTAGTGCAGTATGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: PSSSSLLEFSCFTMR*FWRLNLRALVQYGF Trigger: GAAACCATACTGCACTAAGGCACGCAGGTTCAGCCGCCAGAACAACCGCATTGTGAAGCAGGAGAACTCCAGCAGTGAGGACGACGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
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| CDS CCA 72 bp | GCTTGCCTGGACCTTCTTGATCTTCTTGCTGGCTACTaGCAGGCCAGAAGACTGGCCAGTAGGTGTCCATGT | + |
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Preference number: 6 (lower is better) Translates to: ACLDLLDLLAGY*QARRLASRCPC Trigger: ACATGGACACCTACTGGCCAGTCTTCTGGCCTGCCAGTAGCCAGCAAGAAGATCAAGAAGGTCCAGGCAAGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
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| CDS CCA 72 bp | GTTCTGGCGGCTGAACCTGCGTGCCTTAGTGCAGTATaGTTTCTTTTCCTCCAGAGTCATCCCTCGCCACAG | + |
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Preference number: 6 (lower is better) Translates to: VLAAEPACLSAV*FLFLQSHPSPQ Trigger: CTGTGGCGAGGGATGACTCTGGAGGAAAAGAAACCATACTGCACTAAGGCACGCAGGTTCAGCCGCCAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
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| CDS CCA 72 bp | CTGCTGGAGTTCTCCTGCTTCACAATGCGGTTGTTCTaGCGGCTGAACCTGCGTGCCTTAGTGCAGTATGGT | + |
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Preference number: 6 (lower is better) Translates to: LLEFSCFTMRLF*RLNLRALVQYG Trigger: ACCATACTGCACTAAGGCACGCAGGTTCAGCCGCCAGAACAACCGCATTGTGAAGCAGGAGAACTCCAGCAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
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| CDS TCA 72 bp | GGTTTCTTTTCCTCCAGAGTCATCCCTCGCCACAGTTaGGCCAGATCCTTGGTGGCAGCTGTGGATGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: GFFSSRVIPRHS*ARSLVAAVDAV Trigger: AACTGCATCCACAGCTGCCACCAAGGATCTGGCTCAACTGTGGCGAGGGATGACTCTGGAGGAAAAGAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
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| CDS GCA 72 bp | GCTGTGGATGCAGTTCCAGGACAGGCTCGGATGTACTaGTTCCGGTTCATCCTGCAGAACATGATGAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: AVDAVPGQARMY*FRFILQNMMKP Trigger: TGGCTTCATCATGTTCTGCAGGATGAACCGGAAGCAGTACATCCGAGCCTGTCCTGGAACTGCATCCACAGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
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| CDS CAA 72 bp | GGGTTCAAACCTGGCCCCACAAATCTACCTTTGCCATaGCTGCTGTGGAGCTTGAGCAAGGCCTTGGTCATG | + |
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Preference number: 6 (lower is better) Translates to: GFKPGPTNLPLP*LLWSLSKALVM Trigger: CATGACCAAGGCCTTGCTCAAGCTCCACAGCAGCAATGGCAAAGGTAGATTTGTGGGGCCAGGTTTGAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
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| CDS CAA 72 bp | GCAGATGGGTTCAAACCTGGCCCCACAAATCTACCTTaGCCATTGCTGCTGTGGAGCTTGAGCAAGGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: ADGFKPGPTNLP*PLLLWSLSKAL Trigger: CAAGGCCTTGCTCAAGCTCCACAGCAGCAATGGCAAAGGTAGATTTGTGGGGCCAGGTTTGAACCCATCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
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| CDS CAA 72 bp | TGGTTTCTTTTCCTCCAGAGTCATCCCTCGCCACAGTaGAGCCAGATCCTTGGTGGCAGCTGTGGATGCAGT | + |
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Preference number: 6 (lower is better) Translates to: WFLFLQSHPSPQ*SQILGGSCGCS Trigger: ACTGCATCCACAGCTGCCACCAAGGATCTGGCTCAACTGTGGCGAGGGATGACTCTGGAGGAAAAGAAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
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| CDS CAA 90 bp | AGTGCAGTATGGTTTCTTTTCCTCCAGAGTCATCCCTCGCCACAGTaGAGCCAGATCCTTGGTGGCAGCTGTGGATGCAGTTCCAGGACA | + |
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Preference number: 6 (lower is better) Translates to: SAVWFLFLQSHPSPQ*SQILGGSCGCSSRT Trigger: TGTCCTGGAACTGCATCCACAGCTGCCACCAAGGATCTGGCTCAACTGTGGCGAGGGATGACTCTGGAGGAAAAGAAACCATACTGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
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| CDS TCA 72 bp | AGATCTCATTCAGGTAGTCTGCCACATGCCAAGTATTaGTCTGGGAAGACCCCAAAGCCAGCGGGCTCCCAT | + |
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Preference number: 6 (lower is better) Translates to: RSHSGSLPHAKY*SGKTPKPAGSH Trigger: ATGGGAGCCCGCTGGCTTTGGGGTCTTCCCAGATCAATACTTGGCATGTGGCAGACTACCTGAATGAGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
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| CDS GCA 72 bp | TTGTCTGCCTCACTGGAAGTACACAAGAATAGCTTCTaGCTGCAAGAACTGACACAGGGCTGTGCCCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: LSASLEVHKNSF*LQELTQGCALV Trigger: CACCAGGGCACAGCCCTGTGTCAGTTCTTGCAGGCAGAAGCTATTCTTGTGTACTTCCAGTGAGGCAGACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
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| CDS CAA 90 bp | AAACCTGGCCCCACAAATCTACCTTTGCCATTGCTGCTGTGGAGCTaGAGCAAGGCCTTGGTCATGTCAATGTTTCTCTGGAGGTACTGG | + |
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Preference number: 6 (lower is better) Translates to: KPGPTNLPLPLLLWS*SKALVMSMFLWRYW Trigger: CCAGTACCTCCAGAGAAACATTGACATGACCAAGGCCTTGCTCAAGCTCCACAGCAGCAATGGCAAAGGTAGATTTGTGGGGCCAGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
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| CDS CAA 90 bp | CCAGCAGATGGGTTCAAACCTGGCCCCACAAATCTACCTTTGCCATaGCTGCTGTGGAGCTTGAGCAAGGCCTTGGTCATGTCAATGTTT | + |
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Preference number: 6 (lower is better) Translates to: PADGFKPGPTNLPLP*LLWSLSKALVMSMF Trigger: AAACATTGACATGACCAAGGCCTTGCTCAAGCTCCACAGCAGCAATGGCAAAGGTAGATTTGTGGGGCCAGGTTTGAACCCATCTGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
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| CDS TCA 72 bp | CTTCTCTTGTGGGCTCTCCACTTCACAGGTAGCAGGTaGAGACTCCAAGAGACCTTCAGTCAGAAAGTAGGT | + |
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Preference number: 6 (lower is better) Translates to: LLLWALHFTGSR*RLQETFSQKVG Trigger: ACCTACTTTCTGACTGAAGGTCTCTTGGAGTCTTCACCTGCTACCTGTGAAGTGGAGAGCCCACAAGAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
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| CDS CCA 72 bp | TCTCCTTCTTGGTGTACTTCTTGTCTCTGGTCTTCATaGTCACAGGGATCAGCAAAGCCAGCTCTCGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: SPSWCTSCLWSS*SQGSAKPALEA Trigger: AGCTTCGAGAGCTGGCTTTGCTGATCCCTGTGACCATGAAGACCAGAGACAAGAAGTACACCAAGAAGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
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| CDS CCA 72 bp | GCAACAGGATCTCCTTCTTGGTGTACTTCTTGTCTCTaGTCTTCATGGTCACAGGGATCAGCAAAGCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: ATGSPSWCTSCL*SSWSQGSAKPA Trigger: AGCTGGCTTTGCTGATCCCTGTGACCATGAAGACCAGAGACAAGAAGTACACCAAGAAGGAGATCCTGTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
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| CDS CAA 72 bp | CCCACAAATCTACCTTTGCCATTGCTGCTGTGGAGCTaGAGCAAGGCCTTGGTCATGTCAATGTTTCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: PTNLPLPLLLWS*SKALVMSMFLW Trigger: CCAGAGAAACATTGACATGACCAAGGCCTTGCTCAAGCTCCACAGCAGCAATGGCAAAGGTAGATTTGTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
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| CDS CAA 90 bp | CTGGTCTTCATGGTCACAGGGATCAGCAAAGCCAGCTCTCGAAGCTaGTTCGTGTGGTTTTTCTTATCCTTCCTGTCAGTAGGACTTGGA | + |
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Preference number: 6 (lower is better) Translates to: LVFMVTGISKASSRS*FVWFFLSFLSVGLG Trigger: TCCAAGTCCTACTGACAGGAAGGATAAGAAAAACCACACGAACAAGCTTCGAGAGCTGGCTTTGCTGATCCCTGTGACCATGAAGACCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000127433.7 ENSMUST00000141380.3 |
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| CDS TCA 72 bp | CCACAAATCTACCTTTGCCATTGCTGCTGTGGAGCTTaGGCAAGGCCTTGGTCATGTCAATGTTTCTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: PQIYLCHCCCGA*ARPWSCQCFSG Trigger: TCCAGAGAAACATTGACATGACCAAGGCCTTGCTCAAGCTCCACAGCAGCAATGGCAAAGGTAGATTTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
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| CDS CAA 72 bp | AGGACACGCAACAGGATCTCCTTCTTGGTGTACTTCTaGTCTCTGGTCTTCATGGTCACAGGGATCAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: RTRNRISFLVYF*SLVFMVTGISK Trigger: TTTGCTGATCCCTGTGACCATGAAGACCAGAGACAAGAAGTACACCAAGAAGGAGATCCTGTTGCGTGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141380.3 |
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| CDS TCA 72 bp | TTCCTGTCAGTAGGACTTGGAGATCTAGCTCTGTGCTaGTCAGAGAAACATGAGAATTTGTCTGAACCCAAC | + |
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Preference number: 6 (lower is better) Translates to: FLSVGLGDLALC*SEKHENLSEPN Trigger: GTTGGGTTCAGACAAATTCTCATGTTTCTCTGATCAGCACAGAGCTAGATCTCCAAGTCCTACTGACAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127433.7 ENSMUST00000141380.3 |
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