Pregenerated sensors for MEIOC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051455Ensembl transcript IDs: ENSMUST00000100378.4, ENSMUST00000156590.8
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | TGGTGGGGTGGGCTATCTTATGTGACTGCCCTCAGTGTGATTCATTaGACAGTTCTAAAGCTTATCAGTGATCAGAGCGTCCCTCCTACA | + |
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Preference number: 2 (lower is better) Translates to: WWGGLSYVTALSVIH*TVLKLISDQSVPPT Trigger: TGTAGGAGGGACGCTCTGATCACTGATAAGCTTTAGAACTGTCAAATGAATCACACTGAGGGCAGTCACATAAGATAGCCCACCCCACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| 3UTR-3UTR TCA 90 bp | AATTTAGGAGAAGCAGATGCATTTCCCTCCATAGACTTAGGCACCAAGATTTCATGCATTTACCTGCACTaGAGAATGGATTTAAGCAAT | + |
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Preference number: 2 (lower is better) Translates to: NLGEADAFPSIDLGTKISCIYLH*RMDLSN Trigger: ATTGCTTAAATCCATTCTTCAGTGCAGGTAAATGCA...TGAAATCTTGGTGCCTAAGTCTATGGAGGGAAATGCATCTGCTTCTCCTAAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| 3UTR TCA 72 bp | CAGTGTGATTCATTTGACAGTTCTAAAGCTTATCAGTaGTCAGAGCGTCCCTCCTACAGTCACTCCTGCACT | + |
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Preference number: 3 (lower is better) Translates to: QCDSFDSSKAYQ*SERPSYSHSCT Trigger: AGTGCAGGAGTGACTGTAGGAGGGACGCTCTGATCACTGATAAGCTTTAGAACTGTCAAATGAATCACACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| 3UTR-3UTR CAA 90 bp | TTTAGGAGAAGCAGATGCATTTCCCTCCATAGACTTAGGCACCAAGATTTCAAAAGAAGAATTTCACATTaGCATTTACCTGCACTGAAG | + |
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Preference number: 3 (lower is better) Translates to: FRRSRCISLHRLRHQDFKRRISH*HLPALK Trigger: CTTCAGTGCAGGTAAATGCAAATGTGAAATTCTTCT...TTTGAAATCTTGGTGCCTAAGTCTATGGAGGGAAATGCATCTGCTTCTCCTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| 3UTR-3UTR CAA 90 bp | TTTAGGAGAAGCAGATGCATTTCCCTCCATAGACTTAGGCACCAAGATTTCAAATATCCCTGTTTTCCTTaGTTTCCTAGGTATTATCCA | + |
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Preference number: 3 (lower is better) Translates to: FRRSRCISLHRLRHQDFKYPCFP*FPRYYP Trigger: TGGATAATACCTAGGAAACAAAGGAAAACAGGGATA...TTTGAAATCTTGGTGCCTAAGTCTATGGAGGGAAATGCATCTGCTTCTCCTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR CCA 90 bp | GCAACTCGCATGGTTCCCACTGGCACTTTCATCACTAATTTAGGAGAAGCAGATATCTGCTTCCACAGTTaGTGTCTCAGGTGTGCCATT | + |
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Preference number: 4 (lower is better) Translates to: ATRMVPTGTFITNLGEADICFHS*CLRCAI Trigger: AATGGCACACCTGAGACACCAACTGTGGAAGCAGAT...ATCTGCTTCTCCTAAATTAGTGATGAAAGTGCCAGTGGGAACCATGCGAGTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR TCA 90 bp | GCAACTCGCATGGTTCCCACTGGCACTTTCATCACTAATTTAGGAGAAGCAGATAGCCAAAATCAGCAGTaGATGCTGCTTCCTTTGCAA | + |
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Preference number: 4 (lower is better) Translates to: ATRMVPTGTFITNLGEADSQNQQ*MLLPLQ Trigger: TTGCAAAGGAAGCAGCATTCACTGCTGATTTTGGCT...ATCTGCTTCTCCTAAATTAGTGATGAAAGTGCCAGTGGGAACCATGCGAGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR TCA 90 bp | CCTGCACTCCCAATCAGTTTCCCCGCACATCATCTAAAGGAAATTTATGTGGTGGTTGGACAAGCTGTGTaGGGCTTTAGTCCATATTCT | + |
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Preference number: 4 (lower is better) Translates to: PALPISFPAHHLKEIYVVVGQAV*GFSPYS Trigger: AGAATATGGACTAAAGCCTCACACAGCTTGTCCAAC...CACCACATAAATTTCCTTTAGATGATGTGCGGGGAAACTGATTGGGAGTGCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR TCA 90 bp | GCAACTCGCATGGTTCCCACTGGCACTTTCATCACTAATTTAGGAGAAGCAGATTCTTCTAGACGAATATaGAGCTCACTAGCTGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: ATRMVPTGTFITNLGEADSSRRI*SSLAGP Trigger: TGGACCAGCTAGTGAGCTTCATATTCGTCTAGAAGA...ATCTGCTTCTCCTAAATTAGTGATGAAAGTGCCAGTGGGAACCATGCGAGTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR CCA 90 bp | GCAACTCGCATGGTTCCCACTGGCACTTTCATCACTAATTTAGGAGAAGCAGATAGTGGAACAACTGAATaGCCAAATGGGTGGGTAGAT | + |
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Preference number: 4 (lower is better) Translates to: ATRMVPTGTFITNLGEADSGTTE*PNGWVD Trigger: ATCTACCCACCCATTTGGCCATTCAGTTGTTCCACT...ATCTGCTTCTCCTAAATTAGTGATGAAAGTGCCAGTGGGAACCATGCGAGTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR TCA 90 bp | CCTGCACTCCCAATCAGTTTCCCCGCACATCATCTAAAGGAAATTTATGTGGTGTTGCTTTTCCACTGCTaGCACAGATTCACCACTATA | + |
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Preference number: 4 (lower is better) Translates to: PALPISFPAHHLKEIYVVLLFHC*HRFTTI Trigger: TATAGTGGTGAATCTGTGTCAGCAGTGGAAAAGCAA...CACCACATAAATTTCCTTTAGATGATGTGCGGGGAAACTGATTGGGAGTGCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR TCA 90 bp | CCTGCACTCCCAATCAGTTTCCCCGCACATCATCTAAAGGAAATTTATGTGGTGTTCCTGATTCTTTCATaGTATCAGACAGGCCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: PALPISFPAHHLKEIYVVFLILS*YQTGQS Trigger: AGACTGGCCTGTCTGATATCATGAAAGAATCAGGAA...CACCACATAAATTTCCTTTAGATGATGTGCGGGGAAACTGATTGGGAGTGCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR TCA 90 bp | GCAACTCGCATGGTTCCCACTGGCACTTTCATCACTAATTTAGGAGAAGCAGATATTATTAGAAAAGCATaGGGCCTGTGTGCGATTCAC | + |
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Preference number: 4 (lower is better) Translates to: ATRMVPTGTFITNLGEADIIRKA*GLCAIH Trigger: GTGAATCGCACACAGGCCTCATGCTTTTCTAATAAT...ATCTGCTTCTCCTAAATTAGTGATGAAAGTGCCAGTGGGAACCATGCGAGTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR TCA 90 bp | TTTAGGAGAAGCAGATGCATTTCCCTCCATAGACTTAGGCACCAAGATTTCAAACAACAGTGGAACAACTaGATGGCCAAATGGGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: FRRSRCISLHRLRHQDFKQQWNN*MAKWVG Trigger: ACCCACCCATTTGGCCATTCAGTTGTTCCACTGTTG...TTTGAAATCTTGGTGCCTAAGTCTATGGAGGGAAATGCATCTGCTTCTCCTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR GCA 90 bp | AATTTAGGAGAAGCAGATGCATTTCCCTCCATAGACTTAGGCACCAAGATTTCAATGAGGAGAGTGGAGTaGAGGTCTGCCTTAGGTCTA | + |
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Preference number: 4 (lower is better) Translates to: NLGEADAFPSIDLGTKISMRRVE*RSALGL Trigger: TAGACCTAAGGCAGACCTGCACTCCACTCTCCTCAT...TGAAATCTTGGTGCCTAAGTCTATGGAGGGAAATGCATCTGCTTCTCCTAAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR GCA 90 bp | CCTGCACTCCCAATCAGTTTCCCCGCACATCATCTAAAGGAAATTTATGTGGTGGGCACTCCTTGTCTTTaGCGATTTGAAGCATTAACA | + |
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Preference number: 4 (lower is better) Translates to: PALPISFPAHHLKEIYVVGTPCL*RFEALT Trigger: TGTTAATGCTTCAAATCGGCAAAGACAAGGAGTGCC...CACCACATAAATTTCCTTTAGATGATGTGCGGGGAAACTGATTGGGAGTGCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR GCA 90 bp | AATTTAGGAGAAGCAGATGCATTTCCCTCCATAGACTTAGGCACCAAGATTTCATTGGCCCGCTGTACTTaGTGTTTTGGGCAAGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: NLGEADAFPSIDLGTKISLARCT*CFGQGH Trigger: ATGACCTTGCCCAAAACAGCAAGTACAGCGGGCCAA...TGAAATCTTGGTGCCTAAGTCTATGGAGGGAAATGCATCTGCTTCTCCTAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR CCA 90 bp | CCTGCACTCCCAATCAGTTTCCCCGCACATCATCTAAAGGAAATTTATGTGGTGAGACAGGCCAGTCTGTaGTGTAAAACAGTTTTTGAC | + |
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Preference number: 4 (lower is better) Translates to: PALPISFPAHHLKEIYVVRQASL*CKTVFD Trigger: GTCAAAAACTGTTTTACACCACAGACTGGCCTGTCT...CACCACATAAATTTCCTTTAGATGATGTGCGGGGAAACTGATTGGGAGTGCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| 3UTR CAA 72 bp | GGGCTATCTTATGTGACTGCCCTCAGTGTGATTCATTaGACAGTTCTAAAGCTTATCAGTGATCAGAGCGTC | + |
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Preference number: 4 (lower is better) Translates to: GLSYVTALSVIH*TVLKLISDQSV Trigger: GACGCTCTGATCACTGATAAGCTTTAGAACTGTCAAATGAATCACACTGAGGGCAGTCACATAAGATAGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR TCA 90 bp | CCTGCACTCCCAATCAGTTTCCCCGCACATCATCTAAAGGAAATTTATGTGGTGTCATTTCTTTCGGTCTaGATCCTGTTCTTTACACTG | + |
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Preference number: 4 (lower is better) Translates to: PALPISFPAHHLKEIYVVSFLSV*ILFFTL Trigger: CAGTGTAAAGAACAGGATTCAGACCGAAAGAAATGA...CACCACATAAATTTCCTTTAGATGATGTGCGGGGAAACTGATTGGGAGTGCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR TCA 90 bp | CCTGCACTCCCAATCAGTTTCCCCGCACATCATCTAAAGGAAATTTATGTGGTGAGAATGATCACTTCTTaGAAGGTACAGCCATTGTTC | + |
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Preference number: 4 (lower is better) Translates to: PALPISFPAHHLKEIYVVRMITS*KVQPLF Trigger: GAACAATGGCTGTACCTTTCAAGAAGTGATCATTCT...CACCACATAAATTTCCTTTAGATGATGTGCGGGGAAACTGATTGGGAGTGCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR TCA 90 bp | GCAACTCGCATGGTTCCCACTGGCACTTTCATCACTAATTTAGGAGAAGCAGATCTGTACAATGTGAATTaGCTCCAAGTGTCTATCAAG | + |
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Preference number: 4 (lower is better) Translates to: ATRMVPTGTFITNLGEADLYNVN*LQVSIK Trigger: CTTGATAGACACTTGGAGTCAATTCACATTGTACAG...ATCTGCTTCTCCTAAATTAGTGATGAAAGTGCCAGTGGGAACCATGCGAGTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR GCA 90 bp | AATTTAGGAGAAGCAGATGCATTTCCCTCCATAGACTTAGGCACCAAGATTTCAAGTGGAGTGCAGGTCTaGCTTAGGTCTACATTGTCT | + |
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Preference number: 4 (lower is better) Translates to: NLGEADAFPSIDLGTKISSGVQV*LRSTLS Trigger: AGACAATGTAGACCTAAGGCAGACCTGCACTCCACT...TGAAATCTTGGTGCCTAAGTCTATGGAGGGAAATGCATCTGCTTCTCCTAAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR GCA 90 bp | CCTGCACTCCCAATCAGTTTCCCCGCACATCATCTAAAGGAAATTTATGTGGTGATCAGCAGTGAATGCTaGTTCCTTTGCAAACTGTTT | + |
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Preference number: 4 (lower is better) Translates to: PALPISFPAHHLKEIYVVISSEC*FLCKLF Trigger: AAACAGTTTGCAAAGGAAGCAGCATTCACTGCTGAT...CACCACATAAATTTCCTTTAGATGATGTGCGGGGAAACTGATTGGGAGTGCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR CCA 90 bp | TTTAGGAGAAGCAGATGCATTTCCCTCCATAGACTTAGGCACCAAGATTTCAAAGAATGGCCAAATGGGTaGGTAGATCTTAGGGGAAAC | + |
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Preference number: 4 (lower is better) Translates to: FRRSRCISLHRLRHQDFKEWPNG*VDLRGN Trigger: GTTTCCCCTAAGATCTACCCACCCATTTGGCCATTC...TTTGAAATCTTGGTGCCTAAGTCTATGGAGGGAAATGCATCTGCTTCTCCTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR CCA 90 bp | GCAACTCGCATGGTTCCCACTGGCACTTTCATCACTAATTTAGGAGAAGCAGATTTCCTGGATAATTCTTaGCAAGGGCTAATTCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: ATRMVPTGTFITNLGEADFLDNS*QGLIQS Trigger: AGACTGAATTAGCCCTTGCCAAGAATTATCCAGGAA...ATCTGCTTCTCCTAAATTAGTGATGAAAGTGCCAGTGGGAACCATGCGAGTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR CCA 90 bp | TTTAGGAGAAGCAGATGCATTTCCCTCCATAGACTTAGGCACCAAGATTTCAAAACATCTCTGTCATCTTaGCACCTAGGCACTCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: FRRSRCISLHRLRHQDFKTSLSS*HLGTPC Trigger: ACAAGGAGTGCCTAGGTGCCAAGATGACAGAGATGT...TTTGAAATCTTGGTGCCTAAGTCTATGGAGGGAAATGCATCTGCTTCTCCTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR CCA 90 bp | AATTTAGGAGAAGCAGATGCATTTCCCTCCATAGACTTAGGCACCAAGATTTCACTGTACTTGCTGTTTTaGGCAAGGTCATCTGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: NLGEADAFPSIDLGTKISLYLLF*ARSSAV Trigger: CACTGCAGATGACCTTGCCCAAAACAGCAAGTACAG...TGAAATCTTGGTGCCTAAGTCTATGGAGGGAAATGCATCTGCTTCTCCTAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR TCA 90 bp | TTTAGGAGAAGCAGATGCATTTCCCTCCATAGACTTAGGCACCAAGATTTCAAATCCTGTTCTTTACACTaGTCTGAGAACTGGGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: FRRSRCISLHRLRHQDFKSCSLH*SENWEV Trigger: AACCTCCCAGTTCTCAGATCAGTGTAAAGAACAGGA...TTTGAAATCTTGGTGCCTAAGTCTATGGAGGGAAATGCATCTGCTTCTCCTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR CCA 90 bp | CCTGCACTCCCAATCAGTTTCCCCGCACATCATCTAAAGGAAATTTATGTGGTGCAGTTTACTAGATCTTaGAAAGCCTTTTCCATGTCA | + |
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Preference number: 4 (lower is better) Translates to: PALPISFPAHHLKEIYVVQFTRS*KAFSMS Trigger: TGACATGGAAAAGGCTTTCCAAGATCTAGTAAACTG...CACCACATAAATTTCCTTTAGATGATGTGCGGGGAAACTGATTGGGAGTGCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR TCA 90 bp | AATTTAGGAGAAGCAGATGCATTTCCCTCCATAGACTTAGGCACCAAGATTTCAGTTAAGAGGTCATGGTaGTCTACAAATCTGCTTGTG | + |
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Preference number: 4 (lower is better) Translates to: NLGEADAFPSIDLGTKISVKRSW*STNLLV Trigger: CACAAGCAGATTTGTAGATCACCATGACCTCTTAAC...TGAAATCTTGGTGCCTAAGTCTATGGAGGGAAATGCATCTGCTTCTCCTAAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR TCA 90 bp | TTTAGGAGAAGCAGATGCATTTCCCTCCATAGACTTAGGCACCAAGATTTCAAACGTGACTGTACAATGTaGATTGACTCCAAGTGTCTA | + |
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Preference number: 4 (lower is better) Translates to: FRRSRCISLHRLRHQDFKRDCTM*IDSKCL Trigger: TAGACACTTGGAGTCAATTCACATTGTACAGTCACG...TTTGAAATCTTGGTGCCTAAGTCTATGGAGGGAAATGCATCTGCTTCTCCTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR GCA 90 bp | AATTTAGGAGAAGCAGATGCATTTCCCTCCATAGACTTAGGCACCAAGATTTCATTGGTGTCTCAGGTGTaGCATTGGCTAACTTTTTAC | + |
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Preference number: 4 (lower is better) Translates to: NLGEADAFPSIDLGTKISLVSQV*HWLTFY Trigger: GTAAAAAGTTAGCCAATGGCACACCTGAGACACCAA...TGAAATCTTGGTGCCTAAGTCTATGGAGGGAAATGCATCTGCTTCTCCTAAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR GCA 90 bp | TTTAGGAGAAGCAGATGCATTTCCCTCCATAGACTTAGGCACCAAGATTTCAAAGGTAAGCCATCAAAATaGTTTGGAATGTCCTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: FRRSRCISLHRLRHQDFKGKPSK*FGMSSG Trigger: TCCTGAGGACATTCCAAAGCATTTTGATGGCTTACC...TTTGAAATCTTGGTGCCTAAGTCTATGGAGGGAAATGCATCTGCTTCTCCTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR GCA 90 bp | AATCAAAACTTGTCTTGGTTACTAAACTGTAGCCATAATTGGGTTACAGTCACTTTGGGCAAGGTCATCTaGAGTGCACACCATAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: NQNLSWLLNCSHNWVTVTLGKVI*SAHHRV Trigger: TACCCTATGGTGTGCACTGCAGATGACCTTGCCCAA...AGTGACTGTAACCCAATTATGGCTACAGTTTAGTAACCAAGACAAGTTTTGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR CCA 90 bp | CCTGCACTCCCAATCAGTTTCCCCGCACATCATCTAAAGGAAATTTATGTGGTGAGGATGAGCATATTCTaGATATCTACAATAATCTGC | + |
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Preference number: 4 (lower is better) Translates to: PALPISFPAHHLKEIYVVRMSIF*ISTIIC Trigger: GCAGATTATTGTAGATATCCAGAATATGCTCATCCT...CACCACATAAATTTCCTTTAGATGATGTGCGGGGAAACTGATTGGGAGTGCAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR CCA 90 bp | AATTTAGGAGAAGCAGATGCATTTCCCTCCATAGACTTAGGCACCAAGATTTCAAATGCAAAATTCTGCTaGTCAGGTATTGTCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: NLGEADAFPSIDLGTKISNAKFC*SGIVSS Trigger: GGAGGAGACAATACCTGACCAGCAGAATTTTGCATT...TGAAATCTTGGTGCCTAAGTCTATGGAGGGAAATGCATCTGCTTCTCCTAAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR CCA 90 bp | GCAACTCGCATGGTTCCCACTGGCACTTTCATCACTAATTTAGGAGAAGCAGATAAAATCATTATTAGTTaGACAAGCTGTGTGAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: ATRMVPTGTFITNLGEADKIIIS*TSCVRL Trigger: AAGCCTCACACAGCTTGTCCAACTAATAATGATTTT...ATCTGCTTCTCCTAAATTAGTGATGAAAGTGCCAGTGGGAACCATGCGAGTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR CCA 90 bp | TTTAGGAGAAGCAGATGCATTTCCCTCCATAGACTTAGGCACCAAGATTTCAAAGTCCACTCTGGGGCTTaGCTTGAAAATTATGTTTGT | + |
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Preference number: 4 (lower is better) Translates to: FRRSRCISLHRLRHQDFKVHSGA*LENYVC Trigger: ACAAACATAATTTTCAAGCCAAGCCCCAGAGTGGAC...TTTGAAATCTTGGTGCCTAAGTCTATGGAGGGAAATGCATCTGCTTCTCCTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR GCA 90 bp | TTTAGGAGAAGCAGATGCATTTCCCTCCATAGACTTAGGCACCAAGATTTCAAAACACATCTCTTTAATTaGTGTAGCAAGGGCAAACAC | + |
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Preference number: 4 (lower is better) Translates to: FRRSRCISLHRLRHQDFKTHLFN*CSKGKH Trigger: GTGTTTGCCCTTGCTACAGCAATTAAAGAGATGTGT...TTTGAAATCTTGGTGCCTAAGTCTATGGAGGGAAATGCATCTGCTTCTCCTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR CCA 90 bp | TTTAGGAGAAGCAGATGCATTTCCCTCCATAGACTTAGGCACCAAGATTTCAAATATCTACTGGCCTTTTaGGTTCTGTTAAGAGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: FRRSRCISLHRLRHQDFKYLLAF*VLLRGH Trigger: ATGACCTCTTAACAGAACCCAAAAGGCCAGTAGATA...TTTGAAATCTTGGTGCCTAAGTCTATGGAGGGAAATGCATCTGCTTCTCCTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR CCA 90 bp | TTTAGGAGAAGCAGATGCATTTCCCTCCATAGACTTAGGCACCAAGATTTCAAAGCCATCAAAATGCTTTaGAATGTCCTCAGGATCATA | + |
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Preference number: 4 (lower is better) Translates to: FRRSRCISLHRLRHQDFKAIKML*NVLRII Trigger: TATGATCCTGAGGACATTCCAAAGCATTTTGATGGC...TTTGAAATCTTGGTGCCTAAGTCTATGGAGGGAAATGCATCTGCTTCTCCTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR CCA 90 bp | AATCAAAACTTGTCTTGGTTACTAAACTGTAGCCATAATTGGGTTACAGTCACTCCGATCAACTCTAGATaGGTTGGAAGTCAGTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: NQNLSWLLNCSHNWVTVTPINSR*VGSQSW Trigger: CCAAGACTGACTTCCAACCCATCTAGAGTTGATCGG...AGTGACTGTAACCCAATTATGGCTACAGTTTAGTAACCAAGACAAGTTTTGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR CCA 90 bp | TTTAGGAGAAGCAGATGCATTTCCCTCCATAGACTTAGGCACCAAGATTTCAAAGTAAAGTCACAACTCTaGCTTGTTCTCGAAGTTCAT | + |
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Preference number: 4 (lower is better) Translates to: FRRSRCISLHRLRHQDFKVKSQL*LVLEVH Trigger: ATGAACTTCGAGAACAAGCCAGAGTTGTGACTTTAC...TTTGAAATCTTGGTGCCTAAGTCTATGGAGGGAAATGCATCTGCTTCTCCTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR GCA 90 bp | TTTAGGAGAAGCAGATGCATTTCCCTCCATAGACTTAGGCACCAAGATTTCAAACTATTATGCAAGTATTaGTTTTCCACTGCTGACACA | + |
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Preference number: 4 (lower is better) Translates to: FRRSRCISLHRLRHQDFKLLCKY*FSTADT Trigger: TGTGTCAGCAGTGGAAAAGCAATACTTGCATAATAG...TTTGAAATCTTGGTGCCTAAGTCTATGGAGGGAAATGCATCTGCTTCTCCTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS-3UTR GCA 90 bp | TTTAGGAGAAGCAGATGCATTTCCCTCCATAGACTTAGGCACCAAGATTTCAAAATCTCTGCCCTTTTATaGTGTAATGGTGTTTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FRRSRCISLHRLRHQDFKISALL*CNGVSR Trigger: TCTTGAAACACCATTACAGCATAAAAGGGCAGAGAT...TTTGAAATCTTGGTGCCTAAGTCTATGGAGGGAAATGCATCTGCTTCTCCTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS-3UTR GCA 90 bp | TTTAGGAGAAGCAGATGCATTTCCCTCCATAGACTTAGGCACCAAGATTTCAAAGTGAGAGAACTATTATaGAAGTATTGCTTTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: FRRSRCISLHRLRHQDFKVRELL*KYCFST Trigger: AGTGGAAAAGCAATACTTGCATAATAGTTCTCTCAC...TTTGAAATCTTGGTGCCTAAGTCTATGGAGGGAAATGCATCTGCTTCTCCTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS-3UTR GCA 90 bp | AATTTAGGAGAAGCAGATGCATTTCCCTCCATAGACTTAGGCACCAAGATTTCAAGACTGAATTCTTTCTaGACCGTTGTAACTAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: NLGEADAFPSIDLGTKISRLNSF*TVVTKI Trigger: GATTTTAGTTACAACGGTGCAGAAAGAATTCAGTCT...TGAAATCTTGGTGCCTAAGTCTATGGAGGGAAATGCATCTGCTTCTCCTAAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS-3UTR GCA 90 bp | AATCAAAACTTGTCTTGGTTACTAAACTGTAGCCATAATTGGGTTACAGTCACTGAAGACGTTCCATTTTaGCCAGTAAAGTCACAACTC | + |
|
Preference number: 4 (lower is better) Translates to: NQNLSWLLNCSHNWVTVTEDVPF*PVKSQL Trigger: GAGTTGTGACTTTACTGGGCAAAATGGAACGTCTTC...AGTGACTGTAACCCAATTATGGCTACAGTTTAGTAACCAAGACAAGTTTTGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS-3UTR CCA 90 bp | AATTTAGGAGAAGCAGATGCATTTCCCTCCATAGACTTAGGCACCAAGATTTCATTTTTCTGTCAGATGTaGTGTTGTTTTTGGAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: NLGEADAFPSIDLGTKISFFCQM*CCFWKC Trigger: GCATTTCCAAAAACAACACCACATCTGACAGAAAAA...TGAAATCTTGGTGCCTAAGTCTATGGAGGGAAATGCATCTGCTTCTCCTAAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS-3UTR CCA 90 bp | AATCAAAACTTGTCTTGGTTACTAAACTGTAGCCATAATTGGGTTACAGTCACTATGAAGCTCACTAGCTaGTCCACTACGGGTTTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: NQNLSWLLNCSHNWVTVTMKLTS*STTGFN Trigger: ATTAAAACCCGTAGTGGACCAGCTAGTGAGCTTCAT...AGTGACTGTAACCCAATTATGGCTACAGTTTAGTAACCAAGACAAGTTTTGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS-3UTR TCA 90 bp | AATCAAAACTTGTCTTGGTTACTAAACTGTAGCCATAATTGGGTTACAGTCACTCTCTGGGGCTTGGCTTaGAAATTATGTTTGTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: NQNLSWLLNCSHNWVTVTLWGLA*KLCLFT Trigger: TGTAAACAAACATAATTTTCAAGCCAAGCCCCAGAG...AGTGACTGTAACCCAATTATGGCTACAGTTTAGTAACCAAGACAAGTTTTGATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS-3UTR CCA 90 bp | AATCAAAACTTGTCTTGGTTACTAAACTGTAGCCATAATTGGGTTACAGTCACTTCTCAGGTGTGCCATTaGCTAACTTTTTACCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: NQNLSWLLNCSHNWVTVTSQVCH*LTFYHL Trigger: AAGATGGTAAAAAGTTAGCCAATGGCACACCTGAGA...AGTGACTGTAACCCAATTATGGCTACAGTTTAGTAACCAAGACAAGTTTTGATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS-3UTR CCA 90 bp | AATCAAAACTTGTCTTGGTTACTAAACTGTAGCCATAATTGGGTTACAGTCACTCTTGTTTCACCTCTCTaGTTCATTGGATTGCTACTA | + |
|
Preference number: 4 (lower is better) Translates to: NQNLSWLLNCSHNWVTVTLVSPL*FIGLLL Trigger: TAGTAGCAATCCAATGAACCAGAGAGGTGAAACAAG...AGTGACTGTAACCCAATTATGGCTACAGTTTAGTAACCAAGACAAGTTTTGATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS-3UTR GCA 90 bp | AATCAAAACTTGTCTTGGTTACTAAACTGTAGCCATAATTGGGTTACAGTCACTTGTTGTTTTTGGAAATaGAAAATTCTGCTGGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NQNLSWLLNCSHNWVTVTCCFWK*KILLVR Trigger: CCTGACCAGCAGAATTTTGCATTTCCAAAAACAACA...AGTGACTGTAACCCAATTATGGCTACAGTTTAGTAACCAAGACAAGTTTTGATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS-3UTR CCA 90 bp | AATCAAAACTTGTCTTGGTTACTAAACTGTAGCCATAATTGGGTTACAGTCACTGTTGGAAGTCAGTCTTaGAATTGGAGTATTATTAGT | + |
|
Preference number: 4 (lower is better) Translates to: NQNLSWLLNCSHNWVTVTVGSQS*NWSIIS Trigger: ACTAATAATACTCCAATTCCAAGACTGACTTCCAAC...AGTGACTGTAACCCAATTATGGCTACAGTTTAGTAACCAAGACAAGTTTTGATT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS GCA 90 bp | ATGTCAGCTTGGCCCGCTGTACTTGCTGTTTTGGGCAAGGTCATCTaGAGTGCACACCATAGGGTAGTGCGTGCTTTTCGAGTAGCTACA | + |
|
Preference number: 5 (lower is better) Translates to: MSAWPAVLAVLGKVI*SAHHRVVRAFRVAT Trigger: TGTAGCTACTCGAAAAGCACGCACTACCCTATGGTGTGCACTGCAGATGACCTTGCCCAAAACAGCAAGTACAGCGGGCCAAGCTGACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS-3UTR CAA 90 bp | AATCAAAACTTGTCTTGGTTACTAAACTGTAGCCATAATTGGGTTACAGTCACTTCCCTCCCTCAGGCCTaGGGGGTGACGGGGCCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: NQNLSWLLNCSHNWVTVTSLPQA*GVTGPA Trigger: TGCCGGCCCCGTCACCCCCAAGGCCTGAGGGAGGGA...AGTGACTGTAACCCAATTATGGCTACAGTTTAGTAACCAAGACAAGTTTTGATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS-3UTR CAA 90 bp | CCTGCACTCCCAATCAGTTTCCCCGCACATCATCTAAAGGAAATTTATGTGGTGAACTTGCATACTCTGTaGATGAGGAGAGTGGAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PALPISFPAHHLKEIYVVNLHTL*MRRVEC Trigger: GCACTCCACTCTCCTCATCAACAGAGTATGCAAGTT...CACCACATAAATTTCCTTTAGATGATGTGCGGGGAAACTGATTGGGAGTGCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS-3UTR CAA 90 bp | CCTGCACTCCCAATCAGTTTCCCCGCACATCATCTAAAGGAAATTTATGTGGTGAGTCACAACTCTGGCTaGTTCTCGAAGTTCATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PALPISFPAHHLKEIYVVSHNSG*FSKFIH Trigger: GTGGATGAACTTCGAGAACAAGCCAGAGTTGTGACT...CACCACATAAATTTCCTTTAGATGATGTGCGGGGAAACTGATTGGGAGTGCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS GCA 90 bp | CTGGCCTTTTGGGTTCTGTTAAGAGGTCATGGTGATCTACAAATCTaGTTGTGTTCATTGGCCAAACTGACTTTAAGTTGGAGGAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LAFWVLLRGHGDLQI*LCSLAKLTLSWRSR Trigger: CCTGCTCCTCCAACTTAAAGTCAGTTTGGCCAATGAACACAAGCAGATTTGTAGATCACCATGACCTCTTAACAGAACCCAAAAGGCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100378.4 ENSMUST00000156590.8 |
||
| CDS-3UTR CAA 90 bp | CCTGCACTCCCAATCAGTTTCCCCGCACATCATCTAAAGGAAATTTATGTGGTGGTCTCAGGTGTGCCATaGGCTAACTTTTTACCATCT | + |
|
Preference number: 5 (lower is better) Translates to: PALPISFPAHHLKEIYVVVSGVP*ANFLPS Trigger: AGATGGTAAAAAGTTAGCCAATGGCACACCTGAGAC...CACCACATAAATTTCCTTTAGATGATGTGCGGGGAAACTGATTGGGAGTGCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS-3UTR CAA 90 bp | AATTTAGGAGAAGCAGATGCATTTCCCTCCATAGACTTAGGCACCAAGATTTCACACATCTCTGTCATCTaGGCACCTAGGCACTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: NLGEADAFPSIDLGTKISHISVI*APRHSL Trigger: CAAGGAGTGCCTAGGTGCCAAGATGACAGAGATGTG...TGAAATCTTGGTGCCTAAGTCTATGGAGGGAAATGCATCTGCTTCTCCTAAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS-3UTR CAA 90 bp | GCAACTCGCATGGTTCCCACTGGCACTTTCATCACTAATTTAGGAGAAGCAGATGTTGTCTCCACTTCCTaGTCTGTGGCTATTAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: ATRMVPTGTFITNLGEADVVSTS*SVAIKM Trigger: CATTTTAATAGCCACAGACAAGGAAGTGGAGACAAC...ATCTGCTTCTCCTAAATTAGTGATGAAAGTGCCAGTGGGAACCATGCGAGTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS-3UTR CAA 90 bp | GCAACTCGCATGGTTCCCACTGGCACTTTCATCACTAATTTAGGAGAAGCAGATTCAACTCTAGATGGGTaGGAAGTCAGTCTTGGAATT | + |
|
Preference number: 5 (lower is better) Translates to: ATRMVPTGTFITNLGEADSTLDG*EVSLGI Trigger: AATTCCAAGACTGACTTCCAACCCATCTAGAGTTGA...ATCTGCTTCTCCTAAATTAGTGATGAAAGTGCCAGTGGGAACCATGCGAGTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS-3UTR CAA 90 bp | AATTTAGGAGAAGCAGATGCATTTCCCTCCATAGACTTAGGCACCAAGATTTCAGCTGTACTTGCTGTTTaGGGCAAGGTCATCTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: NLGEADAFPSIDLGTKISAVLAV*GKVICS Trigger: ACTGCAGATGACCTTGCCCAAAACAGCAAGTACAGC...TGAAATCTTGGTGCCTAAGTCTATGGAGGGAAATGCATCTGCTTCTCCTAAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS-3UTR CAA 90 bp | CCTGCACTCCCAATCAGTTTCCCCGCACATCATCTAAAGGAAATTTATGTGGTGCACCTCTCTGGTTCATaGGATTGCTACTATTTATGC | + |
|
Preference number: 5 (lower is better) Translates to: PALPISFPAHHLKEIYVVHLSGS*DCYYLC Trigger: GCATAAATAGTAGCAATCCAATGAACCAGAGAGGTG...CACCACATAAATTTCCTTTAGATGATGTGCGGGGAAACTGATTGGGAGTGCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS-3UTR CAA 90 bp | GCAACTCGCATGGTTCCCACTGGCACTTTCATCACTAATTTAGGAGAAGCAGATAAGCTCATCTATTTTTaGCTGTGGTGTGAGAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: ATRMVPTGTFITNLGEADKLIYF*LWCERT Trigger: AGTTCTCTCACACCACAGCAAAAAATAGATGAGCTT...ATCTGCTTCTCCTAAATTAGTGATGAAAGTGCCAGTGGGAACCATGCGAGTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS CCA 90 bp | CTATTTATGCTTTCATGGACTTTCTCTTCACAGTTTACTAGATCTTaGAAAGCCTTTTCCATGTCAGCTTGGCCCGCTGTACTTGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LFMLSWTFSSQFTRS*KAFSMSAWPAVLAV Trigger: AACAGCAAGTACAGCGGGCCAAGCTGACATGGAAAAGGCTTTCCAAGATCTAGTAAACTGTGAAGAGAAAGTCCATGAAAGCATAAATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS-3UTR CAA 90 bp | TTTAGGAGAAGCAGATGCATTTCCCTCCATAGACTTAGGCACCAAGATTTCAAAGTCAGCATCATGCTGTaGAAGACGTCGGATAATCTA | + |
|
Preference number: 5 (lower is better) Translates to: FRRSRCISLHRLRHQDFKVSIML*KTSDNL Trigger: TAGATTATCCGACGTCTTCAACAGCATGATGCTGAC...TTTGAAATCTTGGTGCCTAAGTCTATGGAGGGAAATGCATCTGCTTCTCCTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS-3UTR CAA 90 bp | AATTTAGGAGAAGCAGATGCATTTCCCTCCATAGACTTAGGCACCAAGATTTCACTGAGAACTGGGAGGTaGTTTAATATCGTCTCCGTA | + |
|
Preference number: 5 (lower is better) Translates to: NLGEADAFPSIDLGTKISLRTGR*FNIVSV Trigger: TACGGAGACGATATTAAACAACCTCCCAGTTCTCAG...TGAAATCTTGGTGCCTAAGTCTATGGAGGGAAATGCATCTGCTTCTCCTAAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS-3UTR CAA 90 bp | AATCAAAACTTGTCTTGGTTACTAAACTGTAGCCATAATTGGGTTACAGTCACTCATCTGCTTCCACAGTaGGTGTCTCAGGTGTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: NQNLSWLLNCSHNWVTVTHLLPQ*VSQVCH Trigger: ATGGCACACCTGAGACACCAACTGTGGAAGCAGATG...AGTGACTGTAACCCAATTATGGCTACAGTTTAGTAACCAAGACAAGTTTTGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS-3UTR CAA 90 bp | GCAACTCGCATGGTTCCCACTGGCACTTTCATCACTAATTTAGGAGAAGCAGATACTGTACAATGTGAATaGACTCCAAGTGTCTATCAA | + |
|
Preference number: 5 (lower is better) Translates to: ATRMVPTGTFITNLGEADTVQCE*TPSVYQ Trigger: TTGATAGACACTTGGAGTCAATTCACATTGTACAGT...ATCTGCTTCTCCTAAATTAGTGATGAAAGTGCCAGTGGGAACCATGCGAGTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS TCA 90 bp | CTGTGGTGTGAGAGAACTATTATGCAAGTATTGCTTTTCCACTGCTaGCACAGATTCACCACTATAAAACGCTTGCTGAGAGATAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: LWCERTIMQVLLFHC*HRFTTIKRLLRDRC Trigger: ACATCTATCTCTCAGCAAGCGTTTTATAGTGGTGAATCTGTGTCAGCAGTGGAAAAGCAATACTTGCATAATAGTTCTCTCACACCACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100378.4 ENSMUST00000156590.8 |
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| CDS-3UTR CAA 90 bp | AATTTAGGAGAAGCAGATGCATTTCCCTCCATAGACTTAGGCACCAAGATTTCAAGGCTTAGCAAACTGTaGCTTTTCAGAGACATTAGC | + |
|
Preference number: 5 (lower is better) Translates to: NLGEADAFPSIDLGTKISRLSKL*LFRDIS Trigger: GCTAATGTCTCTGAAAAGCAACAGTTTGCTAAGCCT...TGAAATCTTGGTGCCTAAGTCTATGGAGGGAAATGCATCTGCTTCTCCTAAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS-3UTR CAA 90 bp | TTTAGGAGAAGCAGATGCATTTCCCTCCATAGACTTAGGCACCAAGATTTCAAATGTCTTCTCCGGTTTTaGTTAGTCCTTCCATGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: FRRSRCISLHRLRHQDFKCLLRF*LVLPCD Trigger: ATCACATGGAAGGACTAACAAAAACCGGAGAAGACA...TTTGAAATCTTGGTGCCTAAGTCTATGGAGGGAAATGCATCTGCTTCTCCTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS-3UTR CAA 90 bp | TTTAGGAGAAGCAGATGCATTTCCCTCCATAGACTTAGGCACCAAGATTTCAAACGGCTATTAATATTGTaGTCTCCACTTCCTTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FRRSRCISLHRLRHQDFKRLLIL*SPLPCL Trigger: CAGACAAGGAAGTGGAGACAACAATATTAATAGCCG...TTTGAAATCTTGGTGCCTAAGTCTATGGAGGGAAATGCATCTGCTTCTCCTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS TCA 90 bp | ATAGATGTATCTACTGGCCTTTTGGGTTCTGTTAAGAGGTCATGGTaGTCTACAAATCTGCTTGTGTTCATTGGCCAAACTGACTTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: IDVSTGLLGSVKRSW*STNLLVFIGQTDFK Trigger: CTTAAAGTCAGTTTGGCCAATGAACACAAGCAGATTTGTAGATCACCATGACCTCTTAACAGAACCCAAAAGGCCAGTAGATACATCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100378.4 ENSMUST00000156590.8 |
||
| CDS-3UTR CAA 90 bp | AATCAAAACTTGTCTTGGTTACTAAACTGTAGCCATAATTGGGTTACAGTCACTCAAACTGACTTTAAGTaGGAGGAGCAGGTCCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: NQNLSWLLNCSHNWVTVTQTDFK*EEQVPS Trigger: TGAAGGGACCTGCTCCTCCAACTTAAAGTCAGTTTG...AGTGACTGTAACCCAATTATGGCTACAGTTTAGTAACCAAGACAAGTTTTGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS-3UTR CAA 90 bp | AATCAAAACTTGTCTTGGTTACTAAACTGTAGCCATAATTGGGTTACAGTCACTGTATCTACTGGCCTTTaGGGTTCTGTTAAGAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: NQNLSWLLNCSHNWVTVTVSTGL*GSVKRS Trigger: TGACCTCTTAACAGAACCCAAAAGGCCAGTAGATAC...AGTGACTGTAACCCAATTATGGCTACAGTTTAGTAACCAAGACAAGTTTTGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS-3UTR CAA 90 bp | AATTTAGGAGAAGCAGATGCATTTCCCTCCATAGACTTAGGCACCAAGATTTCAGACAAATGGATATTCTaGGAAAGTTGCCTTAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: NLGEADAFPSIDLGTKISDKWIF*ESCLNC Trigger: ACAGTTAAGGCAACTTTCCAAGAATATCCATTTGTC...TGAAATCTTGGTGCCTAAGTCTATGGAGGGAAATGCATCTGCTTCTCCTAAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS-3UTR CAA 90 bp | AATTTAGGAGAAGCAGATGCATTTCCCTCCATAGACTTAGGCACCAAGATTTCAGATGTGGTGTTGTTTTaGGAAATGCAAAATTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: NLGEADAFPSIDLGTKISDVVLF*EMQNSA Trigger: AGCAGAATTTTGCATTTCCAAAAACAACACCACATC...TGAAATCTTGGTGCCTAAGTCTATGGAGGGAAATGCATCTGCTTCTCCTAAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS-3UTR CAA 90 bp | AATCAAAACTTGTCTTGGTTACTAAACTGTAGCCATAATTGGGTTACAGTCACTAGCCATCAAAATGCTTaGGAATGTCCTCAGGATCAT | + |
|
Preference number: 5 (lower is better) Translates to: NQNLSWLLNCSHNWVTVTSHQNA*ECPQDH Trigger: ATGATCCTGAGGACATTCCAAAGCATTTTGATGGCT...AGTGACTGTAACCCAATTATGGCTACAGTTTAGTAACCAAGACAAGTTTTGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS GCA 90 bp | GTTTACTTGTTTCACCTCTCTGGTTCATTGGATTGCTACTATTTATaGTTTCATGGACTTTCTCTTCACAGTTTACTAGATCTTGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: VYLFHLSGSLDCYYL*FHGLSLHSLLDLGK Trigger: CTTTCCAAGATCTAGTAAACTGTGAAGAGAAAGTCCATGAAAGCATAAATAGTAGCAATCCAATGAACCAGAGAGGTGAAACAAGTAAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS-3UTR CAA 90 bp | AATCAAAACTTGTCTTGGTTACTAAACTGTAGCCATAATTGGGTTACAGTCACTATCTGCTTGTGTTCATaGGCCAAACTGACTTTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: NQNLSWLLNCSHNWVTVTICLCS*AKLTLS Trigger: ACTTAAAGTCAGTTTGGCCAATGAACACAAGCAGAT...AGTGACTGTAACCCAATTATGGCTACAGTTTAGTAACCAAGACAAGTTTTGATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS-3UTR CAA 90 bp | AATCAAAACTTGTCTTGGTTACTAAACTGTAGCCATAATTGGGTTACAGTCACTTTAGGGGAAACCCATTaGAACCAAGTTGTTGAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: NQNLSWLLNCSHNWVTVTLGETH*NQVVEN Trigger: GTTTTCAACAACTTGGTTCAAATGGGTTTCCCCTAA...AGTGACTGTAACCCAATTATGGCTACAGTTTAGTAACCAAGACAAGTTTTGATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS TCA 90 bp | TTTAGTACATATTTTCTCTCTTCCATAGGCATAAGTATCAATTCCTaGTTCTTTCATGATATCAGACAGGCCAGTCTGTGGTGTAAAACA | + |
|
Preference number: 5 (lower is better) Translates to: FSTYFLSSIGISINS*FFHDIRQASLWCKT Trigger: TGTTTTACACCACAGACTGGCCTGTCTGATATCATGAAAGAATCAGGAATTGATACTTATGCCTATGGAAGAGAGAAAATATGTACTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100378.4 ENSMUST00000156590.8 |
||
| CDS TCA 90 bp | TTTGAAGCATTAACAATTTCATCCTTTCTACGTGACTGTACAATGTaGATTGACTCCAAGTGTCTATCAAGAGCAGTAGAGATATTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: FEALTISSFLRDCTM*IDSKCLSRAVEILA Trigger: TGCTAATATCTCTACTGCTCTTGATAGACACTTGGAGTCAATTCACATTGTACAGTCACGTAGAAAGGATGAAATTGTTAATGCTTCAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS CAA 90 bp | CGCCGCGGCCGCCGCCACCTTCGGCTCAGGTCCCTCCCTCAGGCCTaGGGGGTGACGGGGCCGGCAGGTGTCTCCGCCGCTCACCTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: RRGRRHLRLRSLPQA*GVTGPAGVSAAHLH Trigger: ATGGAGGTGAGCGGCGGAGACACCTGCCGGCCCCGTCACCCCCAAGGCCTGAGGGAGGGACCTGAGCCGAAGGTGGCGGCGGCCGCGGCG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS CAA 90 bp | GCCGAGCCGGTCAGCATCATGCTGTTGAAGACGTCGGATAATCTATaGCTGGTGTCGACGCTGAGGTTCCAGCACCGATTCGCGCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: AEPVSIMLLKTSDNL*LVSTLRFQHRFALP Trigger: TGGAAGCGCGAATCGGTGCTGGAACCTCAGCGTCGACACCAGCAATAGATTATCCGACGTCTTCAACAGCATGATGCTGACCGGCTCGGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
||
| CDS GCA 72 bp | TGGCCCGCTGTACTTGCTGTTTTGGGCAAGGTCATCTaGAGTGCACACCATAGGGTAGTGCGTGCTTTTCGA | + |
|
Preference number: 6 (lower is better) Translates to: WPAVLAVLGKVI*SAHHRVVRAFR Trigger: TCGAAAAGCACGCACTACCCTATGGTGTGCACTGCAGATGACCTTGCCCAAAACAGCAAGTACAGCGGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS CAA 72 bp | GGAAAGCCTTTTCCATGTCAGCTTGGCCCGCTGTACTaGCTGTTTTGGGCAAGGTCATCTGCAGTGCACACC | + |
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Preference number: 6 (lower is better) Translates to: GKPFPCQLGPLY*LFWARSSAVHT Trigger: GGTGTGCACTGCAGATGACCTTGCCCAAAACAGCAAGTACAGCGGGCCAAGCTGACATGGAAAAGGCTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS CAA 90 bp | TGGAAAGCCTTTTCCATGTCAGCTTGGCCCGCTGTACTTGCTGTTTaGGGCAAGGTCATCTGCAGTGCACACCATAGGGTAGTGCGTGCT | + |
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Preference number: 6 (lower is better) Translates to: WKAFSMSAWPAVLAV*GKVICSAHHRVVRA Trigger: AGCACGCACTACCCTATGGTGTGCACTGCAGATGACCTTGCCCAAAACAGCAAGTACAGCGGGCCAAGCTGACATGGAAAAGGCTTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS GCA 72 bp | GAAAGCCTTTTCCATGTCAGCTTGGCCCGCTGTACTTaGTGTTTTGGGCAAGGTCATCTGCAGTGCACACCA | + |
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Preference number: 6 (lower is better) Translates to: ESLFHVSLARCT*CFGQGHLQCTP Trigger: TGGTGTGCACTGCAGATGACCTTGCCCAAAACAGCAAGTACAGCGGGCCAAGCTGACATGGAAAAGGCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS CAA 72 bp | GTCAGCATCATGCTGTTGAAGACGTCGGATAATCTATaGCTGGTGTCGACGCTGAGGTTCCAGCACCGATTC | + |
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Preference number: 6 (lower is better) Translates to: VSIMLLKTSDNL*LVSTLRFQHRF Trigger: GAATCGGTGCTGGAACCTCAGCGTCGACACCAGCAATAGATTATCCGACGTCTTCAACAGCATGATGCTGAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS CAA 72 bp | TTTTCCATGTCAGCTTGGCCCGCTGTACTTGCTGTTTaGGGCAAGGTCATCTGCAGTGCACACCATAGGGTA | + |
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Preference number: 6 (lower is better) Translates to: FSMSAWPAVLAV*GKVICSAHHRV Trigger: TACCCTATGGTGTGCACTGCAGATGACCTTGCCCAAAACAGCAAGTACAGCGGGCCAAGCTGACATGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS CCA 72 bp | ATCTGCTTGTGTTCATTGGCCAAACTGACTTTAAGTTaGAGGAGCAGGTCCCTTCAGCAAAATATGGCTGCG | + |
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Preference number: 6 (lower is better) Translates to: ICLCSLAKLTLS*RSRSLQQNMAA Trigger: CGCAGCCATATTTTGCTGAAGGGACCTGCTCCTCCAACTTAAAGTCAGTTTGGCCAATGAACACAAGCAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100378.4 ENSMUST00000156590.8 |
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| CDS CCA 72 bp | ATTGCTGTAGCAAGGGCAAACACATCTCTGTCATCTTaGCACCTAGGCACTCCTTGTCTTTGCCGATTTGAA | + |
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Preference number: 6 (lower is better) Translates to: IAVARANTSLSS*HLGTPCLCRFE Trigger: TTCAAATCGGCAAAGACAAGGAGTGCCTAGGTGCCAAGATGACAGAGATGTGTTTGCCCTTGCTACAGCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS TCA 72 bp | TCCAAGTGTCTATCAAGAGCAGTAGAGATATTAGCATaGAGGGGAGAGCTTCGAAGACGTTCCATTTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: SKCLSRAVEILA*RGELRRRSILP Trigger: GGGCAAAATGGAACGTCTTCGAAGCTCTCCCCTTCATGCTAATATCTCTACTGCTCTTGATAGACACTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS CAA 72 bp | AATCTGCTTGTGTTCATTGGCCAAACTGACTTTAAGTaGGAGGAGCAGGTCCCTTCAGCAAAATATGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: NLLVFIGQTDFK*EEQVPSAKYGC Trigger: GCAGCCATATTTTGCTGAAGGGACCTGCTCCTCCAACTTAAAGTCAGTTTGGCCAATGAACACAAGCAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100378.4 ENSMUST00000156590.8 |
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| CDS CAA 72 bp | AGAGGTCATGGTGATCTACAAATCTGCTTGTGTTCATaGGCCAAACTGACTTTAAGTTGGAGGAGCAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: RGHGDLQICLCS*AKLTLSWRSRS Trigger: GGACCTGCTCCTCCAACTTAAAGTCAGTTTGGCCAATGAACACAAGCAGATTTGTAGATCACCATGACCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100378.4 ENSMUST00000156590.8 |
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| CDS CAA 90 bp | GTTCTGTTAAGAGGTCATGGTGATCTACAAATCTGCTTGTGTTCATaGGCCAAACTGACTTTAAGTTGGAGGAGCAGGTCCCTTCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: VLLRGHGDLQICLCS*AKLTLSWRSRSLQQ Trigger: TTGCTGAAGGGACCTGCTCCTCCAACTTAAAGTCAGTTTGGCCAATGAACACAAGCAGATTTGTAGATCACCATGACCTCTTAACAGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100378.4 ENSMUST00000156590.8 |
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| CDS GCA 72 bp | GCGTGCTTTTCGAGTAGCTACACACATCTCTTTAATTaGTGTAGCAAGGGCAAACACATCTCTGTCATCTTG | + |
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Preference number: 6 (lower is better) Translates to: ACFSSSYTHLFN*CSKGKHISVIL Trigger: CAAGATGACAGAGATGTGTTTGCCCTTGCTACAGCAATTAAAGAGATGTGTGTAGCTACTCGAAAAGCACGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS CCA 72 bp | CTTTCATGGACTTTCTCTTCACAGTTTACTAGATCTTaGAAAGCCTTTTCCATGTCAGCTTGGCCCGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: LSWTFSSQFTRS*KAFSMSAWPAV Trigger: TACAGCGGGCCAAGCTGACATGGAAAAGGCTTTCCAAGATCTAGTAAACTGTGAAGAGAAAGTCCATGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS CAA 90 bp | TTCGGTCTGAATCCTGTTCTTTACACTGATCTGAGAACTGGGAGGTaGTTTAATATCGTCTCCGTAAGTAGACCATGGTGCATAGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: FGLNPVLYTDLRTGR*FNIVSVSRPWCIEE Trigger: CTCTTCTATGCACCATGGTCTACTTACGGAGACGATATTAAACAACCTCCCAGTTCTCAGATCAGTGTAAAGAACAGGATTCAGACCGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100378.4 ENSMUST00000156590.8 |
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| CDS TCA 72 bp | TCTACTGGCCTTTTGGGTTCTGTTAAGAGGTCATGGTaGTCTACAAATCTGCTTGTGTTCATTGGCCAAACT | + |
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Preference number: 6 (lower is better) Translates to: STGLLGSVKRSW*STNLLVFIGQT Trigger: AGTTTGGCCAATGAACACAAGCAGATTTGTAGATCACCATGACCTCTTAACAGAACCCAAAAGGCCAGTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100378.4 ENSMUST00000156590.8 |
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| CDS CAA 72 bp | AATCCTGTTCTTTACACTGATCTGAGAACTGGGAGGTaGTTTAATATCGTCTCCGTAAGTAGACCATGGTGC | + |
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Preference number: 6 (lower is better) Translates to: NPVLYTDLRTGR*FNIVSVSRPWC Trigger: GCACCATGGTCTACTTACGGAGACGATATTAAACAACCTCCCAGTTCTCAGATCAGTGTAAAGAACAGGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100378.4 ENSMUST00000156590.8 |
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| CDS CAA 72 bp | GCATCTGCTTCCACAGTTGGTGTCTCAGGTGTGCCATaGGCTAACTTTTTACCATCTTGGACACTAAAATTT | + |
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Preference number: 6 (lower is better) Translates to: ASASTVGVSGVP*ANFLPSWTLKF Trigger: AAATTTTAGTGTCCAAGATGGTAAAAAGTTAGCCAATGGCACACCTGAGACACCAACTGTGGAAGCAGATGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100378.4 ENSMUST00000156590.8 |
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| CDS GCA 72 bp | TGGGTTCTGTTAAGAGGTCATGGTGATCTACAAATCTaGTTGTGTTCATTGGCCAAACTGACTTTAAGTTGG | + |
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Preference number: 6 (lower is better) Translates to: WVLLRGHGDLQI*LCSLAKLTLSW Trigger: CCAACTTAAAGTCAGTTTGGCCAATGAACACAAGCAGATTTGTAGATCACCATGACCTCTTAACAGAACCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100378.4 ENSMUST00000156590.8 |
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| CDS TCA 72 bp | GAGAGAACTATTATGCAAGTATTGCTTTTCCACTGCTaGCACAGATTCACCACTATAAAACGCTTGCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: ERTIMQVLLFHC*HRFTTIKRLLR Trigger: TCTCAGCAAGCGTTTTATAGTGGTGAATCTGTGTCAGCAGTGGAAAAGCAATACTTGCATAATAGTTCTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100378.4 ENSMUST00000156590.8 |
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| CDS CAA 90 bp | TGTTCTCGAAGTTCATCCACAATTAACCGATCAACTCTAGATGGGTaGGAAGTCAGTCTTGGAATTGGAGTATTATTAGTACTGGATACT | + |
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Preference number: 6 (lower is better) Translates to: CSRSSSTINRSTLDG*EVSLGIGVLLVLDT Trigger: AGTATCCAGTACTAATAATACTCCAATTCCAAGACTGACTTCCAACCCATCTAGAGTTGATCGGTTAATTGTGGATGAACTTCGAGAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS TCA 72 bp | TATTTTCTCTCTTCCATAGGCATAAGTATCAATTCCTaGTTCTTTCATGATATCAGACAGGCCAGTCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: YFLSSIGISINS*FFHDIRQASLW Trigger: CCACAGACTGGCCTGTCTGATATCATGAAAGAATCAGGAATTGATACTTATGCCTATGGAAGAGAGAAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100378.4 ENSMUST00000156590.8 |
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| CDS CAA 90 bp | CAGGCCAGTCTGTGGTGTAAAACAGTTTTTGACAAATGGATATTCTaGGAAAGTTGCCTTAACTGTATCATTAGCCTGACTATTGTAACA | + |
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Preference number: 6 (lower is better) Translates to: QASLWCKTVFDKWIF*ESCLNCIISLTIVT Trigger: TGTTACAATAGTCAGGCTAATGATACAGTTAAGGCAACTTTCCAAGAATATCCATTTGTCAAAAACTGTTTTACACCACAGACTGGCCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100378.4 ENSMUST00000156590.8 |
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| CDS TCA 72 bp | TTAACAATTTCATCCTTTCTACGTGACTGTACAATGTaGATTGACTCCAAGTGTCTATCAAGAGCAGTAGAG | + |
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Preference number: 6 (lower is better) Translates to: LTISSFLRDCTM*IDSKCLSRAVE Trigger: CTCTACTGCTCTTGATAGACACTTGGAGTCAATTCACATTGTACAGTCACGTAGAAAGGATGAAATTGTTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS CAA 72 bp | AGTTCATCCACAATTAACCGATCAACTCTAGATGGGTaGGAAGTCAGTCTTGGAATTGGAGTATTATTAGTA | + |
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Preference number: 6 (lower is better) Translates to: SSSTINRSTLDG*EVSLGIGVLLV Trigger: TACTAATAATACTCCAATTCCAAGACTGACTTCCAACCCATCTAGAGTTGATCGGTTAATTGTGGATGAACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100378.4 |
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| CDS TCA 72 bp | TTGTTTGAACATTCATCCAAGTTGGTCTGTTTAAACTaGTACCTCCTGAAGATGTTGCTGAATTTGAGAATA | + |
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Preference number: 6 (lower is better) Translates to: LFEHSSKLVCLN*YLLKMLLNLRI Trigger: TATTCTCAAATTCAGCAACATCTTCAGGAGGTATCAGTTTAAACAGACCAACTTGGATGAATGTTCAAACAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100378.4 ENSMUST00000156590.8 |
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