Pregenerated sensors for MEIOB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024155Ensembl transcript IDs: ENSMUST00000024972.7, ENSMUST00000234372.2, ENSMUST00000234455.2
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGTATGTCCTTGTCTAGCCAGGTTCCTGCTTGCCTCAGTAGGATCTaGAAGCTTACAGGAGAGTATGGTGACTTTCAGTCCACCCCTTGC | + |
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Preference number: 1 (lower is better) Translates to: SMSLSSQVPACLSRI*KLTGEYGDFQSTPC Trigger: GCAAGGGGTGGACTGAAAGTCACCATACTCTCCTGTAAGCTTGCAGATCCTACTGAGGCAAGCAGGAACCTGGCTAGACAAGGACATACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234455.2 |
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| 3UTR TCA 90 bp | AAACTCATTTATCGTGCAGCCCAAAGTTTCCTCAGCAATACTTCCTaGGAGACTGCAGGAATGGAGGGTTCCAGTGTGGTCAGTAAGATC | + |
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Preference number: 1 (lower is better) Translates to: KLIYRAAQSFLSNTS*ETAGMEGSSVVSKI Trigger: GATCTTACTGACCACACTGGAACCCTCCATTCCTGCAGTCTCTCAGGAAGTATTGCTGAGGAAACTTTGGGCTGCACGATAAATGAGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234455.2 |
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| 3UTR GCA 90 bp | CAAAATCTGGTTTTAAGTATGTCCTTGTCTAGCCAGGTTCCTGCTTaGCTCAGTAGGATCTGCAAGCTTACAGGAGAGTATGGTGACTTT | + |
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Preference number: 1 (lower is better) Translates to: QNLVLSMSLSSQVPA*LSRICKLTGEYGDF Trigger: AAAGTCACCATACTCTCCTGTAAGCTTGCAGATCCTACTGAGGCAAGCAGGAACCTGGCTAGACAAGGACATACTTAAAACCAGATTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234455.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGCAAGCTTACAGGAGAGTATGGTGACTTTCAGTCCACCCCTTGCTCTGTGTTGGAAGAATCTTGGTTaGAAATTGTACAAGTATTGG | + |
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Preference number: 2 (lower is better) Translates to: SASLQESMVTFSPPLALCWKNLG*KLYKYW Trigger: CCAATACTTGTACAATTTGCAACCAAGATTCTTCCA...ACACAGAGCAAGGGGTGGACTGAAAGTCACCATACTCTCCTGTAAGCTTGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234455.2 |
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| 3UTR-3UTR TCA 90 bp | CCAAGCATGTTTATTTCTGTACATAAGCAAACATTTCCCCATGTGAGAGTAGACGTTCACTTGTCATTGTaGGAAACTCATTTATCGTGC | + |
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Preference number: 2 (lower is better) Translates to: PSMFISVHKQTFPHVRVDVHLSL*ETHLSC Trigger: GCACGATAAATGAGTTTCTCACAATGACAAGTGAAC...GTCTACTCTCACATGGGGAAATGTTTGCTTATGTACAGAAATAAACATGCTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234455.2 |
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| 3UTR GCA 72 bp | TTGTCTAGCCAGGTTCCTGCTTGCCTCAGTAGGATCTaGAAGCTTACAGGAGAGTATGGTGACTTTCAGTCC | + |
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Preference number: 3 (lower is better) Translates to: LSSQVPACLSRI*KLTGEYGDFQS Trigger: GGACTGAAAGTCACCATACTCTCCTGTAAGCTTGCAGATCCTACTGAGGCAAGCAGGAACCTGGCTAGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234455.2 |
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| 3UTR CCA 72 bp | CTTCCTGAGAGACTGCAGGAATGGAGGGTTCCAGTGTaGTCAGTAAGATCAACTAGCACATCAAAACTGAGA | + |
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Preference number: 3 (lower is better) Translates to: LPERLQEWRVPV*SVRSTSTSKLR Trigger: TCTCAGTTTTGATGTGCTAGTTGATCTTACTGACCACACTGGAACCCTCCATTCCTGCAGTCTCTCAGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234455.2 |
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| 3UTR-3UTR CAA 90 bp | GTGAGAGTAGACAGGGTAAGGTTAATAGAAATGGTATTCCAGGGGGCTGAGCTAGTTTTAAGTATGTCCTaGTCTAGCCAGGTTCCTGCT | + |
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Preference number: 3 (lower is better) Translates to: VRVDRVRLIEMVFQGAELVLSMS*SSQVPA Trigger: AGCAGGAACCTGGCTAGACAAGGACATACTTAAAAC...TAGCTCAGCCCCCTGGAATACCATTTCTATTAACCTTACCCTGTCTACTCTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234455.2 |
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| 3UTR-3UTR CAA 90 bp | CCTGCTTGCCTCAGTAGGATCTGCAAGCTTACAGGAGAGTATGGTGACTTTCAGTCTTTCCAAAAGAAGTaGCCACTTCAGCTTTGTTTT | + |
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Preference number: 3 (lower is better) Translates to: PACLSRICKLTGEYGDFQSFQKK*PLQLCF Trigger: AAAACAAAGCTGAAGTGGCAACTTCTTTTGGAAAGA...CTGAAAGTCACCATACTCTCCTGTAAGCTTGCAGATCCTACTGAGGCAAGCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234455.2 |
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| 3UTR-3UTR CAA 90 bp | TCCCCATGTGAGAGTAGACAGGGTAAGGTTAATAGAAATGGTATTCCAGGGGGCCAATCTGGAAGAATCTaGGTTGCAAATTGTACAAGT | + |
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Preference number: 3 (lower is better) Translates to: SPCESRQGKVNRNGIPGGQSGRI*VANCTS Trigger: ACTTGTACAATTTGCAACCAAGATTCTTCCAGATTG...GCCCCCTGGAATACCATTTCTATTAACCTTACCCTGTCTACTCTCACATGGGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234455.2 |
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| CDS-3UTR CCA 90 bp | TCCCCATGTGAGAGTAGACAGGGTAAGGTTAATAGAAATGGTATTCCAGGGGGCGAGAGACTGCAGGAATaGAGGGTTCCAGTGTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: SPCESRQGKVNRNGIPGGERLQE*RVPVWS Trigger: TGACCACACTGGAACCCTCCATTCCTGCAGTCTCTC...GCCCCCTGGAATACCATTTCTATTAACCTTACCCTGTCTACTCTCACATGGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 |
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| CDS-3UTR GCA 90 bp | TCCCCATGTGAGAGTAGACAGGGTAAGGTTAATAGAAATGGTATTCCAGGGGGCTACTTCCTGAGAGACTaGAGGAATGGAGGGTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: SPCESRQGKVNRNGIPGGYFLRD*RNGGFQ Trigger: CTGGAACCCTCCATTCCTGCAGTCTCTCAGGAAGTA...GCCCCCTGGAATACCATTTCTATTAACCTTACCCTGTCTACTCTCACATGGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 |
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| CDS-3UTR CCA 90 bp | GTGAGAGTAGACAGGGTAAGGTTAATAGAAATGGTATTCCAGGGGGCTGAGCTAGAGAGACTGCAGGAATaGAGGGTTCCAGTGTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: VRVDRVRLIEMVFQGAELERLQE*RVPVWS Trigger: TGACCACACTGGAACCCTCCATTCCTGCAGTCTCTC...TAGCTCAGCCCCCTGGAATACCATTTCTATTAACCTTACCCTGTCTACTCTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 |
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| CDS-3UTR TCA 90 bp | GCCTCAGTAGGATCTGCAAGCTTACAGGAGAGTATGGTGACTTTCAGTCCACCCGATACATTCACAAAGTaGCATGGTGAGTCACGAATG | + |
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Preference number: 4 (lower is better) Translates to: ASVGSASLQESMVTFSPPDTFTK*HGESRM Trigger: CATTCGTGACTCACCATGTCACTTTGTGAATGTATC...GGGTGGACTGAAAGTCACCATACTCTCCTGTAAGCTTGCAGATCCTACTGAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234455.2 |
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| CDS-3UTR TCA 90 bp | CCAAGCATGTTTATTTCTGTACATAAGCAAACATTTCCCCATGTGAGAGTAGACCACACTCAGCAACCCTaGAGCTCTCGGACAGCGAGC | + |
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Preference number: 4 (lower is better) Translates to: PSMFISVHKQTFPHVRVDHTQQP*SSRTAS Trigger: GCTCGCTGTCCGAGAGCTTCAGGGTTGCTGAGTGTG...GTCTACTCTCACATGGGGAAATGTTTGCTTATGTACAGAAATAAACATGCTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024972.7 ENSMUST00000234455.2 |
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| CDS-3UTR GCA 90 bp | GTGAGAGTAGACAGGGTAAGGTTAATAGAAATGGTATTCCAGGGGGCTGAGCTATACTTCCTGAGAGACTaGAGGAATGGAGGGTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: VRVDRVRLIEMVFQGAELYFLRD*RNGGFQ Trigger: CTGGAACCCTCCATTCCTGCAGTCTCTCAGGAAGTA...TAGCTCAGCCCCCTGGAATACCATTTCTATTAACCTTACCCTGTCTACTCTCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 |
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| CDS-3UTR TCA 90 bp | TCCCCATGTGAGAGTAGACAGGGTAAGGTTAATAGAAATGGTATTCCAGGGGGCGATACATTCACAAAGTaGCATGGTGAGTCACGAATG | + |
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Preference number: 4 (lower is better) Translates to: SPCESRQGKVNRNGIPGGDTFTK*HGESRM Trigger: CATTCGTGACTCACCATGTCACTTTGTGAATGTATC...GCCCCCTGGAATACCATTTCTATTAACCTTACCCTGTCTACTCTCACATGGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024972.7 ENSMUST00000234455.2 |
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| CDS-3UTR TCA 90 bp | TCAATCTGGAAGAATCTTGGTTGCAAATTGTACAAGTATTGGAGGCTTCATTTACACACTCAGCAACCCTaGAGCTCTCGGACAGCGAGC | + |
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Preference number: 4 (lower is better) Translates to: SIWKNLGCKLYKYWRLHLHTQQP*SSRTAS Trigger: GCTCGCTGTCCGAGAGCTTCAGGGTTGCTGAGTGTG...TAAATGAAGCCTCCAATACTTGTACAATTTGCAACCAAGATTCTTCCAGATTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234455.2 |
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| CDS-3UTR TCA 90 bp | GCCTCAGTAGGATCTGCAAGCTTACAGGAGAGTATGGTGACTTTCAGTCCACCCACTTTTACCATTGAGTaGTTCTCACTGAGCAATAGT | + |
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Preference number: 4 (lower is better) Translates to: ASVGSASLQESMVTFSPPTFTIE*FSLSNS Trigger: ACTATTGCTCAGTGAGAATCACTCAATGGTAAAAGT...GGGTGGACTGAAAGTCACCATACTCTCCTGTAAGCTTGCAGATCCTACTGAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234455.2 |
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| CDS-3UTR TCA 90 bp | GCAAGCTTACAGGAGAGTATGGTGACTTTCAGTCCACCCCTTGCTCTGTGTGATTGTGATAATGGTCTTTaGGATTACAGTTGCTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: ASLQESMVTFSPPLALCDCDNGL*DYSCCH Trigger: ATGGCAGCAACTGTAATCTCAAAGACCATTATCACA...ATCACACAGAGCAAGGGGTGGACTGAAAGTCACCATACTCTCCTGTAAGCTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234455.2 |
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| CDS-3UTR CCA 90 bp | GCCTCAGTAGGATCTGCAAGCTTACAGGAGAGTATGGTGACTTTCAGTCCACCCAGTTGTAAAGTATTTTaGTTCTCCAACCGATCTCAC | + |
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Preference number: 4 (lower is better) Translates to: ASVGSASLQESMVTFSPPSCKVF*FSNRSH Trigger: GTGAGATCGGTTGGAGAACCAAAATACTTTACAACT...GGGTGGACTGAAAGTCACCATACTCTCCTGTAAGCTTGCAGATCCTACTGAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234455.2 |
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| CDS-3UTR CCA 90 bp | GCCTCAGTAGGATCTGCAAGCTTACAGGAGAGTATGGTGACTTTCAGTCCACCCTCTGTGCAAGTAGAATaGATTCATTATCCCAACATG | + |
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Preference number: 4 (lower is better) Translates to: ASVGSASLQESMVTFSPPSVQVE*IHYPNM Trigger: CATGTTGGGATAATGAATCCATTCTACTTGCACAGA...GGGTGGACTGAAAGTCACCATACTCTCCTGTAAGCTTGCAGATCCTACTGAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234455.2 |
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| CDS-3UTR TCA 90 bp | ATACTTCCTGAGAGACTGCAGGAATGGAGGGTTCCAGTGTGGTCAGTAAGATCAGCAAACTTTTACCATTaGGTGATTCTCACTGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: ILPERLQEWRVPVWSVRSANFYH*VILTEQ Trigger: TTGCTCAGTGAGAATCACTCAATGGTAAAAGTTTGC...TGATCTTACTGACCACACTGGAACCCTCCATTCCTGCAGTCTCTCAGGAAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234455.2 |
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| CDS-3UTR GCA 90 bp | TCCCCATGTGAGAGTAGACAGGGTAAGGTTAATAGAAATGGTATTCCAGGGGGCATGAAGATCGGAAAGTaGAGTGAAGTTCTTCAATGC | + |
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Preference number: 4 (lower is better) Translates to: SPCESRQGKVNRNGIPGGMKIGK*SEVLQC Trigger: GCATTGAAGAACTTCACTGCACTTTCCGATCTTCAT...GCCCCCTGGAATACCATTTCTATTAACCTTACCCTGTCTACTCTCACATGGGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
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| CDS-3UTR GCA 90 bp | ATACTTCCTGAGAGACTGCAGGAATGGAGGGTTCCAGTGTGGTCAGTAAGATCAATGAAGATCGGAAAGTaGAGTGAAGTTCTTCAATGC | + |
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Preference number: 4 (lower is better) Translates to: ILPERLQEWRVPVWSVRSMKIGK*SEVLQC Trigger: GCATTGAAGAACTTCACTGCACTTTCCGATCTTCAT...TGATCTTACTGACCACACTGGAACCCTCCATTCCTGCAGTCTCTCAGGAAGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234455.2 |
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| CDS-3UTR GCA 90 bp | ATTTCTGTACATAAGCAAACATTTCCCCATGTGAGAGTAGACAGGGTAAGGTTAAGCCAGGTTCCTGCTTaGCTCAGTAGGATCTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: ISVHKQTFPHVRVDRVRLSQVPA*LSRICK Trigger: CTTGCAGATCCTACTGAGGCAAGCAGGAACCTGGCT...TAACCTTACCCTGTCTACTCTCACATGGGGAAATGTTTGCTTATGTACAGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 |
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| CDS-3UTR CCA 90 bp | GTGAGAGTAGACAGGGTAAGGTTAATAGAAATGGTATTCCAGGGGGCTGAGCTATTAACCTCACATCTCTaGCCTTTTCTTCGGTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: VRVDRVRLIEMVFQGAELLTSHL*PFLRSE Trigger: TTCAGACCGAAGAAAAGGCCAGAGATGTGAGGTTAA...TAGCTCAGCCCCCTGGAATACCATTTCTATTAACCTTACCCTGTCTACTCTCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
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| CDS-3UTR TCA 90 bp | TCCCCATGTGAGAGTAGACAGGGTAAGGTTAATAGAAATGGTATTCCAGGGGGCACTTTTACCATTGAGTaGTTCTCACTGAGCAATAGT | + |
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Preference number: 4 (lower is better) Translates to: SPCESRQGKVNRNGIPGGTFTIE*FSLSNS Trigger: ACTATTGCTCAGTGAGAATCACTCAATGGTAAAAGT...GCCCCCTGGAATACCATTTCTATTAACCTTACCCTGTCTACTCTCACATGGGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
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| CDS-3UTR TCA 90 bp | GTGAGAGTAGACAGGGTAAGGTTAATAGAAATGGTATTCCAGGGGGCTGAGCTAGCCTTTTCTTCGGTCTaGAGTTGTAAAGTATTTTGG | + |
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Preference number: 4 (lower is better) Translates to: VRVDRVRLIEMVFQGAELAFSSV*SCKVFW Trigger: CCAAAATACTTTACAACTTCAGACCGAAGAAAAGGC...TAGCTCAGCCCCCTGGAATACCATTTCTATTAACCTTACCCTGTCTACTCTCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
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| CDS-3UTR TCA 90 bp | GTGAGAGTAGACAGGGTAAGGTTAATAGAAATGGTATTCCAGGGGGCTGAGCTATGTGATAATGGTCTTTaGGATTACAGTTGCTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: VRVDRVRLIEMVFQGAELCDNGL*DYSCCH Trigger: ATGGCAGCAACTGTAATCTCAAAGACCATTATCACA...TAGCTCAGCCCCCTGGAATACCATTTCTATTAACCTTACCCTGTCTACTCTCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
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| CDS-3UTR GCA 90 bp | GTGAGAGTAGACAGGGTAAGGTTAATAGAAATGGTATTCCAGGGGGCTGAGCTAATAGTTGCTAGGAGTTaGAGGGCTAAACTTTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: VRVDRVRLIEMVFQGAELIVARS*RAKLFF Trigger: GAAGAAAAGTTTAGCCCTGCAACTCCTAGCAACTAT...TAGCTCAGCCCCCTGGAATACCATTTCTATTAACCTTACCCTGTCTACTCTCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
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| CDS-3UTR GCA 90 bp | GTGAGAGTAGACAGGGTAAGGTTAATAGAAATGGTATTCCAGGGGGCTGAGCTAAACCGATCTCACAGCTaGAAGCACATTAATAATCCT | + |
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Preference number: 4 (lower is better) Translates to: VRVDRVRLIEMVFQGAELNRSHS*KHINNP Trigger: AGGATTATTAATGTGCTTGCAGCTGTGAGATCGGTT...TAGCTCAGCCCCCTGGAATACCATTTCTATTAACCTTACCCTGTCTACTCTCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
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| CDS-3UTR GCA 90 bp | AGACCAAGCATGTTTATTTCTGTACATAAGCAAACATTTCCCCATGTGAGAGTAAGCCAGGTTCCTGCTTaGCTCAGTAGGATCTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: RPSMFISVHKQTFPHVRVSQVPA*LSRICK Trigger: CTTGCAGATCCTACTGAGGCAAGCAGGAACCTGGCT...TACTCTCACATGGGGAAATGTTTGCTTATGTACAGAAATAAACATGCTTGGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 |
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| CDS-3UTR CCA 90 bp | TCCCCATGTGAGAGTAGACAGGGTAAGGTTAATAGAAATGGTATTCCAGGGGGCTCAAAGAAAGTAACTTaGTATCCACTTCATAAGGGG | + |
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Preference number: 4 (lower is better) Translates to: SPCESRQGKVNRNGIPGGSKKVT*YPLHKG Trigger: CCCCTTATGAAGTGGATACCAAGTTACTTTCTTTGA...GCCCCCTGGAATACCATTTCTATTAACCTTACCCTGTCTACTCTCACATGGGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
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| CDS-3UTR CCA 90 bp | TCCCCATGTGAGAGTAGACAGGGTAAGGTTAATAGAAATGGTATTCCAGGGGGCTCTGTGCAAGTAGAATaGATTCATTATCCCAACATG | + |
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Preference number: 4 (lower is better) Translates to: SPCESRQGKVNRNGIPGGSVQVE*IHYPNM Trigger: CATGTTGGGATAATGAATCCATTCTACTTGCACAGA...GCCCCCTGGAATACCATTTCTATTAACCTTACCCTGTCTACTCTCACATGGGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
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| CDS-3UTR TCA 90 bp | GTGAGAGTAGACAGGGTAAGGTTAATAGAAATGGTATTCCAGGGGGCTGAGCTAACTTTTACCATTGAGTaGTTCTCACTGAGCAATAGT | + |
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Preference number: 4 (lower is better) Translates to: VRVDRVRLIEMVFQGAELTFTIE*FSLSNS Trigger: ACTATTGCTCAGTGAGAATCACTCAATGGTAAAAGT...TAGCTCAGCCCCCTGGAATACCATTTCTATTAACCTTACCCTGTCTACTCTCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
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| CDS-3UTR CCA 90 bp | GTGAGAGTAGACAGGGTAAGGTTAATAGAAATGGTATTCCAGGGGGCTGAGCTATCAAAGAAAGTAACTTaGTATCCACTTCATAAGGGG | + |
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Preference number: 4 (lower is better) Translates to: VRVDRVRLIEMVFQGAELSKKVT*YPLHKG Trigger: CCCCTTATGAAGTGGATACCAAGTTACTTTCTTTGA...TAGCTCAGCCCCCTGGAATACCATTTCTATTAACCTTACCCTGTCTACTCTCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
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| CDS-3UTR TCA 90 bp | ATTTCTGTACATAAGCAAACATTTCCCCATGTGAGAGTAGACAGGGTAAGGTTACCCAACATGTCATTGTaGAAGAAGGCTCTGTTTCAT | + |
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Preference number: 4 (lower is better) Translates to: ISVHKQTFPHVRVDRVRLPNMSL*KKALFH Trigger: ATGAAACAGAGCCTTCTTTCACAATGACATGTTGGG...TAACCTTACCCTGTCTACTCTCACATGGGGAAATGTTTGCTTATGTACAGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
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| CDS-3UTR GCA 90 bp | AGACCAAGCATGTTTATTTCTGTACATAAGCAAACATTTCCCCATGTGAGAGTATGCCTCAGTAGGATCTaGAAGCTTACAGGAGAGTAT | + |
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Preference number: 4 (lower is better) Translates to: RPSMFISVHKQTFPHVRVCLSRI*KLTGEY Trigger: ATACTCTCCTGTAAGCTTGCAGATCCTACTGAGGCA...TACTCTCACATGGGGAAATGTTTGCTTATGTACAGAAATAAACATGCTTGGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 |
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| CDS-3UTR CCA 90 bp | ATTTCTGTACATAAGCAAACATTTCCCCATGTGAGAGTAGACAGGGTAAGGTTATTAACCTCACATCTCTaGCCTTTTCTTCGGTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: ISVHKQTFPHVRVDRVRLLTSHL*PFLRSE Trigger: TTCAGACCGAAGAAAAGGCCAGAGATGTGAGGTTAA...TAACCTTACCCTGTCTACTCTCACATGGGGAAATGTTTGCTTATGTACAGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
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| CDS-3UTR CCA 90 bp | TTTCTGTTCACTTGTCATTGTGAGAAACTCATTTATCGTGCAGCCCAAAGTTTCTTAACCTCACATCTCTaGCCTTTTCTTCGGTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: FLFTCHCEKLIYRAAQSFLTSHL*PFLRSE Trigger: TTCAGACCGAAGAAAAGGCCAGAGATGTGAGGTTAA...GAAACTTTGGGCTGCACGATAAATGAGTTTCTCACAATGACAAGTGAACAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234455.2 |
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| CDS-3UTR TCA 90 bp | ATTTCTGTACATAAGCAAACATTTCCCCATGTGAGAGTAGACAGGGTAAGGTTAGCAAACTTTTACCATTaGGTGATTCTCACTGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: ISVHKQTFPHVRVDRVRLANFYH*VILTEQ Trigger: TTGCTCAGTGAGAATCACTCAATGGTAAAAGTTTGC...TAACCTTACCCTGTCTACTCTCACATGGGGAAATGTTTGCTTATGTACAGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
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| CDS-3UTR TCA 90 bp | CCAAGCATGTTTATTTCTGTACATAAGCAAACATTTCCCCATGTGAGAGTAGACGCCTTTTCTTCGGTCTaGAGTTGTAAAGTATTTTGG | + |
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Preference number: 4 (lower is better) Translates to: PSMFISVHKQTFPHVRVDAFSSV*SCKVFW Trigger: CCAAAATACTTTACAACTTCAGACCGAAGAAAAGGC...GTCTACTCTCACATGGGGAAATGTTTGCTTATGTACAGAAATAAACATGCTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
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| CDS-3UTR TCA 90 bp | CCAAGCATGTTTATTTCTGTACATAAGCAAACATTTCCCCATGTGAGAGTAGACTGTGATAATGGTCTTTaGGATTACAGTTGCTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PSMFISVHKQTFPHVRVDCDNGL*DYSCCH Trigger: ATGGCAGCAACTGTAATCTCAAAGACCATTATCACA...GTCTACTCTCACATGGGGAAATGTTTGCTTATGTACAGAAATAAACATGCTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
||
| CDS-3UTR TCA 90 bp | ATTTCTGTACATAAGCAAACATTTCCCCATGTGAGAGTAGACAGGGTAAGGTTAGTTCACTTGTCATTGTaGGAAACTCATTTATCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ISVHKQTFPHVRVDRVRLVHLSL*ETHLSC Trigger: GCACGATAAATGAGTTTCTCACAATGACAAGTGAAC...TAACCTTACCCTGTCTACTCTCACATGGGGAAATGTTTGCTTATGTACAGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 |
||
| CDS-3UTR GCA 90 bp | ATTTCTGTACATAAGCAAACATTTCCCCATGTGAGAGTAGACAGGGTAAGGTTAATGAAGATCGGAAAGTaGAGTGAAGTTCTTCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: ISVHKQTFPHVRVDRVRLMKIGK*SEVLQC Trigger: GCATTGAAGAACTTCACTGCACTTTCCGATCTTCAT...TAACCTTACCCTGTCTACTCTCACATGGGGAAATGTTTGCTTATGTACAGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
||
| CDS-3UTR GCA 90 bp | ATTTCTGTACATAAGCAAACATTTCCCCATGTGAGAGTAGACAGGGTAAGGTTAATAGTTGCTAGGAGTTaGAGGGCTAAACTTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISVHKQTFPHVRVDRVRLIVARS*RAKLFF Trigger: GAAGAAAAGTTTAGCCCTGCAACTCCTAGCAACTAT...TAACCTTACCCTGTCTACTCTCACATGGGGAAATGTTTGCTTATGTACAGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
||
| CDS-3UTR GCA 90 bp | ATTTCTGTACATAAGCAAACATTTCCCCATGTGAGAGTAGACAGGGTAAGGTTAAACCGATCTCACAGCTaGAAGCACATTAATAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: ISVHKQTFPHVRVDRVRLNRSHS*KHINNP Trigger: AGGATTATTAATGTGCTTGCAGCTGTGAGATCGGTT...TAACCTTACCCTGTCTACTCTCACATGGGGAAATGTTTGCTTATGTACAGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
||
| CDS-3UTR GCA 90 bp | TCCATCGTAAGAGTTAAATGTCTATATTTTCCCAGAATTTGGAGCAAAATCTGGTGCCTCAGTAGGATCTaGAAGCTTACAGGAGAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SIVRVKCLYFPRIWSKIWCLSRI*KLTGEY Trigger: ATACTCTCCTGTAAGCTTGCAGATCCTACTGAGGCA...CCAGATTTTGCTCCAAATTCTGGGAAAATATAGACATTTAACTCTTACGATGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 |
||
| CDS-3UTR CCA 90 bp | CCAAGCATGTTTATTTCTGTACATAAGCAAACATTTCCCCATGTGAGAGTAGACCAGATTAGCCATATTTaGATGAAGATCGGAAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PSMFISVHKQTFPHVRVDQISHI*MKIGKC Trigger: GCACTTTCCGATCTTCATCCAAATATGGCTAATCTG...GTCTACTCTCACATGGGGAAATGTTTGCTTATGTACAGAAATAAACATGCTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
||
| CDS-3UTR TCA 90 bp | CCAAGCATGTTTATTTCTGTACATAAGCAAACATTTCCCCATGTGAGAGTAGACTTGAGTGATTCTCACTaGGCAATAGTTTATAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PSMFISVHKQTFPHVRVDLSDSH*AIVYSC Trigger: GCAACTATAAACTATTGCTCAGTGAGAATCACTCAA...GTCTACTCTCACATGGGGAAATGTTTGCTTATGTACAGAAATAAACATGCTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
||
| CDS-3UTR TCA 90 bp | AAGATTTCAATCTGGAAGAATCTTGGTTGCAAATTGTACAAGTATTGGAGGCTTCCCAACATGTCATTGTaGAAGAAGGCTCTGTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KISIWKNLGCKLYKYWRLPNMSL*KKALFH Trigger: ATGAAACAGAGCCTTCTTTCACAATGACATGTTGGG...AAGCCTCCAATACTTGTACAATTTGCAACCAAGATTCTTCCAGATTGAAATCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234455.2 |
||
| CDS-3UTR GCA 90 bp | CCAAGCATGTTTATTTCTGTACATAAGCAAACATTTCCCCATGTGAGAGTAGACCTTTCCAAAAGAAGTTaGCACTTCAGCTTTGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PSMFISVHKQTFPHVRVDLSKRS*HFSFVF Trigger: GAAAACAAAGCTGAAGTGGCAACTTCTTTTGGAAAG...GTCTACTCTCACATGGGGAAATGTTTGCTTATGTACAGAAATAAACATGCTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 |
||
| CDS-3UTR CCA 90 bp | AGACCAAGCATGTTTATTTCTGTACATAAGCAAACATTTCCCCATGTGAGAGTACAGATTAGCCATATTTaGATGAAGATCGGAAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RPSMFISVHKQTFPHVRVQISHI*MKIGKC Trigger: GCACTTTCCGATCTTCATCCAAATATGGCTAATCTG...TACTCTCACATGGGGAAATGTTTGCTTATGTACAGAAATAAACATGCTTGGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
||
| CDS-3UTR CCA 90 bp | CCAAGCATGTTTATTTCTGTACATAAGCAAACATTTCCCCATGTGAGAGTAGACTCAAAGAAAGTAACTTaGTATCCACTTCATAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PSMFISVHKQTFPHVRVDSKKVT*YPLHKG Trigger: CCCCTTATGAAGTGGATACCAAGTTACTTTCTTTGA...GTCTACTCTCACATGGGGAAATGTTTGCTTATGTACAGAAATAAACATGCTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
||
| CDS-3UTR CCA 90 bp | ATTTCTGTACATAAGCAAACATTTCCCCATGTGAGAGTAGACAGGGTAAGGTTAAATTCAGTAGGATATTaGCTTCTGGTGTATCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ISVHKQTFPHVRVDRVRLNSVGY*LLVYLD Trigger: ATCCAGATACACCAGAAGCCAATATCCTACTGAATT...TAACCTTACCCTGTCTACTCTCACATGGGGAAATGTTTGCTTATGTACAGAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTGTTCACTTGTCATTGTGAGAAACTCATTTATCGTGCAGCCCAAAGTTTCAATTCAGTAGGATATTaGCTTCTGGTGTATCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FLFTCHCEKLIYRAAQSFNSVGY*LLVYLD Trigger: ATCCAGATACACCAGAAGCCAATATCCTACTGAATT...GAAACTTTGGGCTGCACGATAAATGAGTTTCTCACAATGACAAGTGAACAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234455.2 |
||
| CDS-3UTR TCA 90 bp | TCCATCGTAAGAGTTAAATGTCTATATTTTCCCAGAATTTGGAGCAAAATCTGGGCAAACTTTTACCATTaGGTGATTCTCACTGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SIVRVKCLYFPRIWSKIWANFYH*VILTEQ Trigger: TTGCTCAGTGAGAATCACTCAATGGTAAAAGTTTGC...CCAGATTTTGCTCCAAATTCTGGGAAAATATAGACATTTAACTCTTACGATGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
||
| CDS-3UTR TCA 90 bp | TCCATCGTAAGAGTTAAATGTCTATATTTTCCCAGAATTTGGAGCAAAATCTGGGCCTTTTCTTCGGTCTaGAGTTGTAAAGTATTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SIVRVKCLYFPRIWSKIWAFSSV*SCKVFW Trigger: CCAAAATACTTTACAACTTCAGACCGAAGAAAAGGC...CCAGATTTTGCTCCAAATTCTGGGAAAATATAGACATTTAACTCTTACGATGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
||
| CDS-3UTR GCA 90 bp | TCCATCGTAAGAGTTAAATGTCTATATTTTCCCAGAATTTGGAGCAAAATCTGGAACCGATCTCACAGCTaGAAGCACATTAATAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SIVRVKCLYFPRIWSKIWNRSHS*KHINNP Trigger: AGGATTATTAATGTGCTTGCAGCTGTGAGATCGGTT...CCAGATTTTGCTCCAAATTCTGGGAAAATATAGACATTTAACTCTTACGATGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
||
| CDS-3UTR GCA 90 bp | ATTTCTGTACATAAGCAAACATTTCCCCATGTGAGAGTAGACAGGGTAAGGTTATGGAAGAATCTTGGTTaGAAATTGTACAAGTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: ISVHKQTFPHVRVDRVRLWKNLG*KLYKYW Trigger: CCAATACTTGTACAATTTGCAACCAAGATTCTTCCA...TAACCTTACCCTGTCTACTCTCACATGGGGAAATGTTTGCTTATGTACAGAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 |
||
| CDS-3UTR CCA 90 bp | AGACCAAGCATGTTTATTTCTGTACATAAGCAAACATTTCCCCATGTGAGAGTAAGTTGTAAAGTATTTTaGTTCTCCAACCGATCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RPSMFISVHKQTFPHVRVSCKVF*FSNRSH Trigger: GTGAGATCGGTTGGAGAACCAAAATACTTTACAACT...TACTCTCACATGGGGAAATGTTTGCTTATGTACAGAAATAAACATGCTTGGTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
||
| CDS-3UTR GCA 90 bp | AGACCAAGCATGTTTATTTCTGTACATAAGCAAACATTTCCCCATGTGAGAGTATGGAAGAATCTTGGTTaGAAATTGTACAAGTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: RPSMFISVHKQTFPHVRVWKNLG*KLYKYW Trigger: CCAATACTTGTACAATTTGCAACCAAGATTCTTCCA...TACTCTCACATGGGGAAATGTTTGCTTATGTACAGAAATAAACATGCTTGGTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 |
||
| CDS-3UTR CCA 90 bp | TCCATCGTAAGAGTTAAATGTCTATATTTTCCCAGAATTTGGAGCAAAATCTGGAGTTGTAAAGTATTTTaGTTCTCCAACCGATCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SIVRVKCLYFPRIWSKIWSCKVF*FSNRSH Trigger: GTGAGATCGGTTGGAGAACCAAAATACTTTACAACT...CCAGATTTTGCTCCAAATTCTGGGAAAATATAGACATTTAACTCTTACGATGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
||
| CDS-3UTR CCA 90 bp | TCCATCGTAAGAGTTAAATGTCTATATTTTCCCAGAATTTGGAGCAAAATCTGGTCTGTGCAAGTAGAATaGATTCATTATCCCAACATG | + |
|
Preference number: 4 (lower is better) Translates to: SIVRVKCLYFPRIWSKIWSVQVE*IHYPNM Trigger: CATGTTGGGATAATGAATCCATTCTACTTGCACAGA...CCAGATTTTGCTCCAAATTCTGGGAAAATATAGACATTTAACTCTTACGATGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
||
| CDS-3UTR CCA 90 bp | TCCATCGTAAGAGTTAAATGTCTATATTTTCCCAGAATTTGGAGCAAAATCTGGAATTCAGTAGGATATTaGCTTCTGGTGTATCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SIVRVKCLYFPRIWSKIWNSVGY*LLVYLD Trigger: ATCCAGATACACCAGAAGCCAATATCCTACTGAATT...CCAGATTTTGCTCCAAATTCTGGGAAAATATAGACATTTAACTCTTACGATGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
||
| CDS-3UTR CAA 90 bp | TCCTTGTCTAGCCAGGTTCCTGCTTGCCTCAGTAGGATCTGCAAGCTTACAGGACTGTCTGGAAAGCCTTaGACATCTGTTTTCCCAATA | + |
|
Preference number: 5 (lower is better) Translates to: SLSSQVPACLSRICKLTGLSGKP*TSVFPI Trigger: TATTGGGAAAACAGATGTCAAAGGCTTTCCAGACAG...TCCTGTAAGCTTGCAGATCCTACTGAGGCAAGCAGGAACCTGGCTAGACAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234455.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCATGTGAGAGTAGACAGGGTAAGGTTAATAGAAATGGTATTCCAGGGGGCCTTTCAGTCCACCCCTaGCTCTGTGTGATAAAATCA | + |
|
Preference number: 5 (lower is better) Translates to: SPCESRQGKVNRNGIPGGLSVHP*LCVIKS Trigger: TGATTTTATCACACAGAGCAAGGGGTGGACTGAAAG...GCCCCCTGGAATACCATTTCTATTAACCTTACCCTGTCTACTCTCACATGGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCATGTGAGAGTAGACAGGGTAAGGTTAATAGAAATGGTATTCCAGGGGGCCTGTCTGGAAAGCCTTaGACATCTGTTTTCCCAATA | + |
|
Preference number: 5 (lower is better) Translates to: SPCESRQGKVNRNGIPGGLSGKP*TSVFPI Trigger: TATTGGGAAAACAGATGTCAAAGGCTTTCCAGACAG...GCCCCCTGGAATACCATTTCTATTAACCTTACCCTGTCTACTCTCACATGGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
||
| CDS-3UTR CAA 90 bp | GTGAGAGTAGACAGGGTAAGGTTAATAGAAATGGTATTCCAGGGGGCTGAGCTACAAGACTGTGTCCATTaGCAACAATGTCAGCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: VRVDRVRLIEMVFQGAELQDCVH*QQCQPM Trigger: CATTGGCTGACATTGTTGCAAATGGACACAGTCTTG...TAGCTCAGCCCCCTGGAATACCATTTCTATTAACCTTACCCTGTCTACTCTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
||
| CDS-3UTR CAA 90 bp | ATACTTCCTGAGAGACTGCAGGAATGGAGGGTTCCAGTGTGGTCAGTAAGATCATCTTTGAGATTACAGTaGCTGCCATGCAGTTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: ILPERLQEWRVPVWSVRSSLRLQ*LPCSSE Trigger: TTCAGAACTGCATGGCAGCAACTGTAATCTCAAAGA...TGATCTTACTGACCACACTGGAACCCTCCATTCCTGCAGTCTCTCAGGAAGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234455.2 |
||
| CDS-3UTR CAA 90 bp | GTGAGAGTAGACAGGGTAAGGTTAATAGAAATGGTATTCCAGGGGGCTGAGCTACTTTCAGTCCACCCCTaGCTCTGTGTGATAAAATCA | + |
|
Preference number: 5 (lower is better) Translates to: VRVDRVRLIEMVFQGAELLSVHP*LCVIKS Trigger: TGATTTTATCACACAGAGCAAGGGGTGGACTGAAAG...TAGCTCAGCCCCCTGGAATACCATTTCTATTAACCTTACCCTGTCTACTCTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 |
||
| CDS-3UTR CAA 90 bp | GTGAGAGTAGACAGGGTAAGGTTAATAGAAATGGTATTCCAGGGGGCTGAGCTACTGTCTGGAAAGCCTTaGACATCTGTTTTCCCAATA | + |
|
Preference number: 5 (lower is better) Translates to: VRVDRVRLIEMVFQGAELLSGKP*TSVFPI Trigger: TATTGGGAAAACAGATGTCAAAGGCTTTCCAGACAG...TAGCTCAGCCCCCTGGAATACCATTTCTATTAACCTTACCCTGTCTACTCTCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCATGTGAGAGTAGACAGGGTAAGGTTAATAGAAATGGTATTCCAGGGGGCCTGGAAGAATCTTGGTaGCAAATTGTACAAGTATTG | + |
|
Preference number: 5 (lower is better) Translates to: SPCESRQGKVNRNGIPGGLEESW*QIVQVL Trigger: CAATACTTGTACAATTTGCAACCAAGATTCTTCCAG...GCCCCCTGGAATACCATTTCTATTAACCTTACCCTGTCTACTCTCACATGGGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 |
||
| CDS TCA 90 bp | TTCATCAAAGAGTTTAACCTCACATCTCTGGCCTTTTCTTCGGTCTaGAGTTGTAAAGTATTTTGGTTCTCCAACCGATCTCACAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FIKEFNLTSLAFSSV*SCKVFWFSNRSHSC Trigger: GCAGCTGTGAGATCGGTTGGAGAACCAAAATACTTTACAACTTCAGACCGAAGAAAAGGCCAGAGATGTGAGGTTAAACTCTTTGATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
||
| CDS-3UTR CAA 90 bp | ATTTCTGTACATAAGCAAACATTTCCCCATGTGAGAGTAGACAGGGTAAGGTTACAAGACTGTGTCCATTaGCAACAATGTCAGCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: ISVHKQTFPHVRVDRVRLQDCVH*QQCQPM Trigger: CATTGGCTGACATTGTTGCAAATGGACACAGTCTTG...TAACCTTACCCTGTCTACTCTCACATGGGGAAATGTTTGCTTATGTACAGAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
||
| CDS CCA 90 bp | GTGAAAGAAGGCTCTGTTTCATCAAAGAGTTTAACCTCACATCTCTaGCCTTTTCTTCGGTCTGAAGTTGTAAAGTATTTTGGTTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VKEGSVSSKSLTSHL*PFLRSEVVKYFGSP Trigger: TGGAGAACCAAAATACTTTACAACTTCAGACCGAAGAAAAGGCCAGAGATGTGAGGTTAAACTCTTTGATGAAACAGAGCCTTCTTTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
||
| CDS-3UTR CAA 90 bp | CCAAGCATGTTTATTTCTGTACATAAGCAAACATTTCCCCATGTGAGAGTAGACTCTTTGAGATTACAGTaGCTGCCATGCAGTTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: PSMFISVHKQTFPHVRVDSLRLQ*LPCSSE Trigger: TTCAGAACTGCATGGCAGCAACTGTAATCTCAAAGA...GTCTACTCTCACATGGGGAAATGTTTGCTTATGTACAGAAATAAACATGCTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
||
| CDS-3UTR CAA 90 bp | ATTTCTGTACATAAGCAAACATTTCCCCATGTGAGAGTAGACAGGGTAAGGTTAGTTGCCACTTCAGCTTaGTTTTCTGTTCACTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ISVHKQTFPHVRVDRVRLVATSA*FSVHLS Trigger: TGACAAGTGAACAGAAAACAAAGCTGAAGTGGCAAC...TAACCTTACCCTGTCTACTCTCACATGGGGAAATGTTTGCTTATGTACAGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 |
||
| CDS-3UTR CAA 90 bp | CCAAGCATGTTTATTTCTGTACATAAGCAAACATTTCCCCATGTGAGAGTAGACGTTGCCACTTCAGCTTaGTTTTCTGTTCACTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PSMFISVHKQTFPHVRVDVATSA*FSVHLS Trigger: TGACAAGTGAACAGAAAACAAAGCTGAAGTGGCAAC...GTCTACTCTCACATGGGGAAATGTTTGCTTATGTACAGAAATAAACATGCTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 |
||
| CDS TCA 90 bp | AATCCTCCCATCAAGACTGTGTCCATTTGCAACAATGTCAGCCAATaGATAATAATCTCGAGATTCTTTAACAGGCAAGTGTATCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: NPPIKTVSICNNVSQ*IIISRFFNRQVYQR Trigger: TCTTTGATACACTTGCCTGTTAAAGAATCTCGAGATTATTATTCATTGGCTGACATTGTTGCAAATGGACACAGTCTTGATGGGAGGATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
||
| CDS-3UTR CAA 90 bp | TCCATCGTAAGAGTTAAATGTCTATATTTTCCCAGAATTTGGAGCAAAATCTGGTCTTTGAGATTACAGTaGCTGCCATGCAGTTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SIVRVKCLYFPRIWSKIWSLRLQ*LPCSSE Trigger: TTCAGAACTGCATGGCAGCAACTGTAATCTCAAAGA...CCAGATTTTGCTCCAAATTCTGGGAAAATATAGACATTTAACTCTTACGATGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
||
| CDS-3UTR CAA 90 bp | CCAAGCATGTTTATTTCTGTACATAAGCAAACATTTCCCCATGTGAGAGTAGACAATCTTGGTTGCAAATaGTACAAGTATTGGAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PSMFISVHKQTFPHVRVDNLGCK*YKYWRL Trigger: AAGCCTCCAATACTTGTACAATTTGCAACCAAGATT...GTCTACTCTCACATGGGGAAATGTTTGCTTATGTACAGAAATAAACATGCTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 |
||
| CDS-3UTR CAA 90 bp | CCAAGCATGTTTATTTCTGTACATAAGCAAACATTTCCCCATGTGAGAGTAGACTCTTTCCAAAAGAAGTaGCCACTTCAGCTTTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: PSMFISVHKQTFPHVRVDSFQKK*PLQLCF Trigger: AAAACAAAGCTGAAGTGGCAACTTCTTTTGGAAAGA...GTCTACTCTCACATGGGGAAATGTTTGCTTATGTACAGAAATAAACATGCTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 |
||
| CDS-3UTR CAA 90 bp | ATTTCTGTACATAAGCAAACATTTCCCCATGTGAGAGTAGACAGGGTAAGGTTATCTTTCCAAAAGAAGTaGCCACTTCAGCTTTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: ISVHKQTFPHVRVDRVRLSFQKK*PLQLCF Trigger: AAAACAAAGCTGAAGTGGCAACTTCTTTTGGAAAGA...TAACCTTACCCTGTCTACTCTCACATGGGGAAATGTTTGCTTATGTACAGAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 |
||
| CDS TCA 90 bp | GATATTGGCTTCTGGTGTATCTGGATTCACTGTGATAATGGTCTTTaGGATTACAGTTGCTGCCATGCAGTTCTGAAATTTGTTAAAATT | + |
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Preference number: 5 (lower is better) Translates to: DIGFWCIWIHCDNGL*DYSCCHAVLKFVKI Trigger: AATTTTAACAAATTTCAGAACTGCATGGCAGCAACTGTAATCTCAAAGACCATTATCACAGTGAATCCAGATACACCAGAAGCCAATATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
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| CDS-3UTR CAA 90 bp | AGACCAAGCATGTTTATTTCTGTACATAAGCAAACATTTCCCCATGTGAGAGTAAATCTTGGTTGCAAATaGTACAAGTATTGGAGGCTT | + |
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Preference number: 5 (lower is better) Translates to: RPSMFISVHKQTFPHVRVNLGCK*YKYWRL Trigger: AAGCCTCCAATACTTGTACAATTTGCAACCAAGATT...TACTCTCACATGGGGAAATGTTTGCTTATGTACAGAAATAAACATGCTTGGTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 |
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| CDS-3UTR CAA 90 bp | AGACCAAGCATGTTTATTTCTGTACATAAGCAAACATTTCCCCATGTGAGAGTACTGGAAGAATCTTGGTaGCAAATTGTACAAGTATTG | + |
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Preference number: 5 (lower is better) Translates to: RPSMFISVHKQTFPHVRVLEESW*QIVQVL Trigger: CAATACTTGTACAATTTGCAACCAAGATTCTTCCAG...TACTCTCACATGGGGAAATGTTTGCTTATGTACAGAAATAAACATGCTTGGTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 |
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| CDS-3UTR CAA 90 bp | AGACCAAGCATGTTTATTTCTGTACATAAGCAAACATTTCCCCATGTGAGAGTACAATCTGGAAGAATCTaGGTTGCAAATTGTACAAGT | + |
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Preference number: 5 (lower is better) Translates to: RPSMFISVHKQTFPHVRVQSGRI*VANCTS Trigger: ACTTGTACAATTTGCAACCAAGATTCTTCCAGATTG...TACTCTCACATGGGGAAATGTTTGCTTATGTACAGAAATAAACATGCTTGGTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 |
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| CDS TCA 72 bp | TCAGGGGATTTTCAATTATCACACACTCAGCAACCCTaGAGCTCTCGGACAGCGAGCGGATGTAGTCCTCAC | + |
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Preference number: 6 (lower is better) Translates to: SGDFQLSHTQQP*SSRTASGCSPH Trigger: GTGAGGACTACATCCGCTCGCTGTCCGAGAGCTTCAGGGTTGCTGAGTGTGTGATAATTGAAAATCCCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024972.7 ENSMUST00000234455.2 |
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| CDS TCA 72 bp | ACTGCCCCAGGAGGATACATTCACAAAGTGACATGGTaGGTCACGAATGGTGAAACTGAAAGTGTATCTTTC | + |
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Preference number: 6 (lower is better) Translates to: TAPGGYIHKVTW*VTNGETESVSF Trigger: GAAAGATACACTTTCAGTTTCACCATTCGTGACTCACCATGTCACTTTGTGAATGTATCCTCCTGGGGCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024972.7 ENSMUST00000234455.2 |
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| CDS GCA 72 bp | TGTAAAGTATTTTGGTTCTCCAACCGATCTCACAGCTaGAAGCACATTAATAATCCTCCCATCAAGACTGTG | + |
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Preference number: 6 (lower is better) Translates to: CKVFWFSNRSHS*KHINNPPIKTV Trigger: CACAGTCTTGATGGGAGGATTATTAATGTGCTTGCAGCTGTGAGATCGGTTGGAGAACCAAAATACTTTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
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| CDS CCA 72 bp | GGCTCTGTTTCATCAAAGAGTTTAACCTCACATCTCTaGCCTTTTCTTCGGTCTGAAGTTGTAAAGTATTTT | + |
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Preference number: 6 (lower is better) Translates to: GSVSSKSLTSHL*PFLRSEVVKYF Trigger: AAAATACTTTACAACTTCAGACCGAAGAAAAGGCCAGAGATGTGAGGTTAAACTCTTTGATGAAACAGAGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
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| CDS TCA 72 bp | ATCAAGACTGTGTCCATTTGCAACAATGTCAGCCAATaGATAATAATCTCGAGATTCTTTAACAGGCAAGTG | + |
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Preference number: 6 (lower is better) Translates to: IKTVSICNNVSQ*IIISRFFNRQV Trigger: CACTTGCCTGTTAAAGAATCTCGAGATTATTATTCATTGGCTGACATTGTTGCAAATGGACACAGTCTTGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024972.7 ENSMUST00000234372.2 ENSMUST00000234455.2 |
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