Pregenerated sensors for MEI4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043289Ensembl transcript IDs: ENSMUST00000057067.10, ENSMUST00000189391.2, ENSMUST00000189832.7
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACTCACTTTGTAGACCAGACTGGCCTCAAACTCAGAAATCTGCCTaGCTCTGTCTCCCGAGTGCTGGGATCAAAGGCGTGTGCCACCAT | + |
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Preference number: 1 (lower is better) Translates to: NSLCRPDWPQTQKSA*LCLPSAGIKGVCHH Trigger: ATGGTGGCACACGCCTTTGATCCCAGCACTCGGGAGACAGAGGCAGGCAGATTTCTGAGTTTGAGGCCAGTCTGGTCTACAAAGTGAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057067.10 |
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| 3UTR CCA 90 bp | GATTCTCAGGGTTGTTCTCCCATCTCAGTGTTGGGGTCTATGGCTTaGCTCTCACTGATAAGTACAAAGATTTGTCTCCTTTGTGCTTTT | + |
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Preference number: 1 (lower is better) Translates to: DSQGCSPISVLGSMA*LSLISTKICLLCAF Trigger: AAAAGCACAAAGGAGACAAATCTTTGTACTTATCAGTGAGAGCCAAGCCATAGACCCCAACACTGAGATGGGAGAACAACCCTGAGAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189832.7 |
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| 3UTR CAA 90 bp | GGATTCTCAGGGTTGTTCTCCCATCTCAGTGTTGGGGTCTATGGCTaGGCTCTCACTGATAAGTACAAAGATTTGTCTCCTTTGTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: GFSGLFSHLSVGVYG*ALTDKYKDLSPLCF Trigger: AAAGCACAAAGGAGACAAATCTTTGTACTTATCAGTGAGAGCCAAGCCATAGACCCCAACACTGAGATGGGAGAACAACCCTGAGAATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189832.7 |
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| 3UTR-3UTR CCA 90 bp | TGCACATTGAAGATGAACACCTTCACAGAAATGCTAATTGCTATTATGGTACATCTCCCATCTCAGTGTTaGGGTCTATGGCTTGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: CTLKMNTFTEMLIAIMVHLPSQC*GLWLGS Trigger: AGAGCCAAGCCATAGACCCCAACACTGAGATGGGAG...ATGTACCATAATAGCAATTAGCATTTCTGTGAAGGTGTTCATCTTCAATGTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189832.7 |
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| 3UTR-3UTR TCA 90 bp | GAGCCCATGAAATTTTGTCTCTTCCATGTTACTATGTCCACTGATATAGTCATTGGGAGCATTGTCAACTaGAATTGCCTGATTGTAATA | + |
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Preference number: 2 (lower is better) Translates to: EPMKFCLFHVTMSTDIVIGSIVN*NCLIVI Trigger: TATTACAATCAGGCAATTTCAGTTGACAATGCTCCC...AATGACTATATCAGTGGACATAGTAACATGGAAGAGACAAAATTTCATGGGCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057067.10 |
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| 3UTR-3UTR CCA 90 bp | GAGCCCATGAAATTTTGTCTCTTCCATGTTACTATGTCCACTGATATAGTCATTTGCCTGATTGTAATATaGAACAGTGGTTCATCAGCT | + |
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Preference number: 2 (lower is better) Translates to: EPMKFCLFHVTMSTDIVICLIVI*NSGSSA Trigger: AGCTGATGAACCACTGTTCCATATTACAATCAGGCA...AATGACTATATCAGTGGACATAGTAACATGGAAGAGACAAAATTTCATGGGCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057067.10 |
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| 3UTR-3UTR TCA 90 bp | GTTGTTTTAGAGACTAGAGCTAGACTGTTGAGTGAAATAAGATATAATCCACGAGGGAGCATTGTCAACTaGAATTGCCTGATTGTAATA | + |
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Preference number: 2 (lower is better) Translates to: VVLETRARLLSEIRYNPRGSIVN*NCLIVI Trigger: TATTACAATCAGGCAATTTCAGTTGACAATGCTCCC...TCGTGGATTATATCTTATTTCACTCAACAGTCTAGCTCTAGTCTCTAAAACAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057067.10 ENSMUST00000189391.2 |
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| 3UTR-3UTR CCA 90 bp | GTTGTTTTAGAGACTAGAGCTAGACTGTTGAGTGAAATAAGATATAATCCACGATGCCTGATTGTAATATaGAACAGTGGTTCATCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: VVLETRARLLSEIRYNPRCLIVI*NSGSSA Trigger: AGCTGATGAACCACTGTTCCATATTACAATCAGGCA...TCGTGGATTATATCTTATTTCACTCAACAGTCTAGCTCTAGTCTCTAAAACAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057067.10 ENSMUST00000189391.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCTGTCCTTCATTTTATTTGCTGCAGGTGATCACTATCATTTAAAAGCCTTCAGCCATTCATGTGTCTaGATAACCATGAAAAATGTT | + |
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Preference number: 2 (lower is better) Translates to: PLSFILFAAGDHYHLKAFSHSCV*ITMKNV Trigger: AACATTTTTCATGGTTATCCAGACACATGAATGGCT...GAAGGCTTTTAAATGATAGTGATCACCTGCAGCAAATAAAATGAAGGACAGAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000189832.7 |
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| 3UTR-3UTR TCA 90 bp | TCAGAATGTGCTAAAATGATGACATTCCTCATGTGTATAGTGCACATTGAAGATTTTTTGCTTAACTTGTaGCATGTGGCATTTATTCCC | + |
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Preference number: 2 (lower is better) Translates to: SECAKMMTFLMCIVHIEDFLLNL*HVAFIP Trigger: GGGAATAAATGCCACATGTCACAAGTTAAGCAAAAA...ATCTTCAATGTGCACTATACACATGAGGAATGTCATCATTTTAGCACATTCTGA 36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000189832.7 |
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| 3UTR CCA 72 bp | GGTTGTTCTCCCATCTCAGTGTTGGGGTCTATGGCTTaGCTCTCACTGATAAGTACAAAGATTTGTCTCCTT | + |
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Preference number: 3 (lower is better) Translates to: GCSPISVLGSMA*LSLISTKICLL Trigger: AAGGAGACAAATCTTTGTACTTATCAGTGAGAGCCAAGCCATAGACCCCAACACTGAGATGGGAGAACAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189832.7 |
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| 3UTR-3UTR CAA 90 bp | CTTGACTGTAGAAATTTATTGGAGTGCATTGGGATTTTACTCCCAATCATCAACGCAGGATTCTCAGGGTaGTTCTCCCATCTCAGTGTT | + |
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Preference number: 3 (lower is better) Translates to: LDCRNLLECIGILLPIINAGFSG*FSHLSV Trigger: AACACTGAGATGGGAGAACAACCCTGAGAATCCTGC...GTTGATGATTGGGAGTAAAATCCCAATGCACTCCAATAAATTTCTACAGTCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189832.7 |
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| 3UTR TCA 72 bp | ATGCCCGGCTTGTCTTTAGTTCTTTATCTAGGAGTGTaGGCCCATGAAATTTTGTCTCTTCCATGTTACTAT | + |
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Preference number: 3 (lower is better) Translates to: MPGLSLVLYLGV*AHEILSLPCYY Trigger: ATAGTAACATGGAAGAGACAAAATTTCATGGGCTCACACTCCTAGATAAAGAACTAAAGACAAGCCGGGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057067.10 |
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| 3UTR TCA 72 bp | CTTGTCTTTAGTTCTTTATCTAGGAGTGTGAGCCCATaGAATTTTGTCTCTTCCATGTTACTATGTCCACTG | + |
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Preference number: 3 (lower is better) Translates to: LVFSSLSRSVSP*NFVSSMLLCPL Trigger: CAGTGGACATAGTAACATGGAAGAGACAAAATTTCATGGGCTCACACTCCTAGATAAAGAACTAAAGACAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057067.10 |
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| 3UTR-3UTR CAA 90 bp | GCTAAAATGATGACATTCCTCATGTGTATAGTGCACATTGAAGATGAACACCTTTGTCCTTCATTTTATTaGCTGCAGGTGATCACTATC | + |
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Preference number: 3 (lower is better) Translates to: AKMMTFLMCIVHIEDEHLCPSFY*LQVITI Trigger: GATAGTGATCACCTGCAGCAAATAAAATGAAGGACA...AAGGTGTTCATCTTCAATGTGCACTATACACATGAGGAATGTCATCATTTTAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189832.7 |
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| 3UTR CCA 72 bp | CCTGCTTTCAATTACTTCTTGACTGTAGAAATTTATTaGAGTGCATTGGGATTTTACTCCCAATCATCAACA | + |
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Preference number: 3 (lower is better) Translates to: PAFNYFLTVEIY*SALGFYSQSST Trigger: TGTTGATGATTGGGAGTAAAATCCCAATGCACTCCAATAAATTTCTACAGTCAAGAAGTAATTGAAAGCAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189832.7 |
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| CDS-3UTR CCA 90 bp | GAGCCCATGAAATTTTGTCTCTTCCATGTTACTATGTCCACTGATATAGTCATTAGGCAGGGGGAGGAGTaGGGGATCGGTGCTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EPMKFCLFHVTMSTDIVIRQGEE*GIGALH Trigger: GTGGAGAGCACCGATCCCCCACTCCTCCCCCTGCCT...AATGACTATATCAGTGGACATAGTAACATGGAAGAGACAAAATTTCATGGGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057067.10 |
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| CDS-3UTR GCA 90 bp | ACTTTTAGCTCTCTCAATAATAAAGATTTAGAAGTGGGGTGGGCAGAGCCAAATGGAGTGGGGGATCGGTaGTCTCCACAAAATGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TFSSLNNKDLEVGWAEPNGVGDR*SPQNAG Trigger: CCCAGCATTTTGTGGAGAGCACCGATCCCCCACTCC...ATTTGGCTCTGCCCACCCCACTTCTAAATCTTTATTATTGAGAGAGCTAAAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000189832.7 |
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| CDS-3UTR CCA 90 bp | AGATTTAGAAGTGGGGTGGGCAGAGCCAAATGCAGGAAGGAAAGGAATCACCAAGTTTTGATTTCCATGTaGACTCCTTCTGGGTCACCA | + |
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Preference number: 4 (lower is better) Translates to: RFRSGVGRAKCRKERNHQVLISM*TPSGSP Trigger: TGGTGACCCAGAAGGAGTCCACATGGAAATCAAAAC...TTGGTGATTCCTTTCCTTCCTGCATTTGGCTCTGCCCACCCCACTTCTAAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189832.7 |
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| 3UTR CAA 72 bp | GGGTTGTTCTCCCATCTCAGTGTTGGGGTCTATGGCTaGGCTCTCACTGATAAGTACAAAGATTTGTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: GLFSHLSVGVYG*ALTDKYKDLSP Trigger: AGGAGACAAATCTTTGTACTTATCAGTGAGAGCCAAGCCATAGACCCCAACACTGAGATGGGAGAACAACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189832.7 |
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| CDS-3UTR GCA 90 bp | GTTGTTTTAGAGACTAGAGCTAGACTGTTGAGTGAAATAAGATATAATCCACGAGGAGTGGGGGATCGGTaGTCTCCACAAAATGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VVLETRARLLSEIRYNPRGVGDR*SPQNAG Trigger: CCCAGCATTTTGTGGAGAGCACCGATCCCCCACTCC...TCGTGGATTATATCTTATTTCACTCAACAGTCTAGCTCTAGTCTCTAAAACAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057067.10 ENSMUST00000189391.2 |
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| CDS-3UTR TCA 90 bp | TATGGCTTGGCTCTCACTGATAAGTACAAAGATTTGTCTCCTTTGTGCTTTTACTCTGTCTGCTGGTTTTaGGTGGATAATCGCCAACGC | + |
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Preference number: 4 (lower is better) Translates to: YGLALTDKYKDLSPLCFYSVCWF*VDNRQR Trigger: GCGTTGGCGATTATCCACTCAAAACCAGCAGACAGA...GTAAAAGCACAAAGGAGACAAATCTTTGTACTTATCAGTGAGAGCCAAGCCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189832.7 |
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| CDS-3UTR GCA 90 bp | GAGCCCATGAAATTTTGTCTCTTCCATGTTACTATGTCCACTGATATAGTCATTGCGATCTCCCTGCGGTaGCTGTTGAAGAACTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: EPMKFCLFHVTMSTDIVIAISLR*LLKNLF Trigger: GAACAAGTTCTTCAACAGGCACCGCAGGGAGATCGC...AATGACTATATCAGTGGACATAGTAACATGGAAGAGACAAAATTTCATGGGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057067.10 |
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| CDS-3UTR TCA 90 bp | GAGCCCATGAAATTTTGTCTCTTCCATGTTACTATGTCCACTGATATAGTCATTTCTGTCTGCTGGTTTTaGGTGGATAATCGCCAACGC | + |
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Preference number: 4 (lower is better) Translates to: EPMKFCLFHVTMSTDIVISVCWF*VDNRQR Trigger: GCGTTGGCGATTATCCACTCAAAACCAGCAGACAGA...AATGACTATATCAGTGGACATAGTAACATGGAAGAGACAAAATTTCATGGGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057067.10 |
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| CDS-3UTR TCA 90 bp | GTTGTTTTAGAGACTAGAGCTAGACTGTTGAGTGAAATAAGATATAATCCACGACCCTGCGGTGCCTGTTaGAGAACTTGTTCCAGAATC | + |
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Preference number: 4 (lower is better) Translates to: VVLETRARLLSEIRYNPRPCGAC*RTCSRI Trigger: GATTCTGGAACAAGTTCTTCAACAGGCACCGCAGGG...TCGTGGATTATATCTTATTTCACTCAACAGTCTAGCTCTAGTCTCTAAAACAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057067.10 ENSMUST00000189391.2 |
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| CDS-3UTR GCA 90 bp | GAGCCCATGAAATTTTGTCTCTTCCATGTTACTATGTCCACTGATATAGTCATTCCAGTCTGGCTAATGTaGCAACAGCCTCTGTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: EPMKFCLFHVTMSTDIVIPVWLM*QQPLSK Trigger: TTTGGACAGAGGCTGTTGGCACATTAGCCAGACTGG...AATGACTATATCAGTGGACATAGTAACATGGAAGAGACAAAATTTCATGGGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057067.10 |
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| CDS-3UTR GCA 90 bp | CTTGACTGTAGAAATTTATTGGAGTGCATTGGGATTTTACTCCCAATCATCAACCCAGTCTGGCTAATGTaGCAACAGCCTCTGTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: LDCRNLLECIGILLPIINPVWLM*QQPLSK Trigger: TTTGGACAGAGGCTGTTGGCACATTAGCCAGACTGG...GTTGATGATTGGGAGTAAAATCCCAATGCACTCCAATAAATTTCTACAGTCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189832.7 |
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| CDS-3UTR GCA 90 bp | GTTGTTTTAGAGACTAGAGCTAGACTGTTGAGTGAAATAAGATATAATCCACGAGCGATCTCCCTGCGGTaGCTGTTGAAGAACTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: VVLETRARLLSEIRYNPRAISLR*LLKNLF Trigger: GAACAAGTTCTTCAACAGGCACCGCAGGGAGATCGC...TCGTGGATTATATCTTATTTCACTCAACAGTCTAGCTCTAGTCTCTAAAACAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057067.10 ENSMUST00000189391.2 |
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| CDS-3UTR TCA 90 bp | GTTGTTTTAGAGACTAGAGCTAGACTGTTGAGTGAAATAAGATATAATCCACGAATTTCTGGGATGCTGTaGTCCATGTGTGCAGTGCGA | + |
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Preference number: 4 (lower is better) Translates to: VVLETRARLLSEIRYNPRISGML*SMCAVR Trigger: TCGCACTGCACACATGGATCACAGCATCCCAGAAAT...TCGTGGATTATATCTTATTTCACTCAACAGTCTAGCTCTAGTCTCTAAAACAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057067.10 ENSMUST00000189391.2 |
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| CDS-3UTR TCA 90 bp | GAGCCCATGAAATTTTGTCTCTTCCATGTTACTATGTCCACTGATATAGTCATTAGTTTCCATCTCTGCTaGGTTCAAGAGAACACCGAG | + |
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Preference number: 4 (lower is better) Translates to: EPMKFCLFHVTMSTDIVISFHLC*VQENTE Trigger: CTCGGTGTTCTCTTGAACTCAGCAGAGATGGAAACT...AATGACTATATCAGTGGACATAGTAACATGGAAGAGACAAAATTTCATGGGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057067.10 |
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| CDS-3UTR GCA 90 bp | GTTGTTTTAGAGACTAGAGCTAGACTGTTGAGTGAAATAAGATATAATCCACGACCAGTCTGGCTAATGTaGCAACAGCCTCTGTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: VVLETRARLLSEIRYNPRPVWLM*QQPLSK Trigger: TTTGGACAGAGGCTGTTGGCACATTAGCCAGACTGG...TCGTGGATTATATCTTATTTCACTCAACAGTCTAGCTCTAGTCTCTAAAACAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057067.10 ENSMUST00000189391.2 |
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| CDS-3UTR CCA 90 bp | GAGCCCATGAAATTTTGTCTCTTCCATGTTACTATGTCCACTGATATAGTCATTTCTGCTGGTTTTGAGTaGATAATCGCCAACGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: EPMKFCLFHVTMSTDIVISAGFE*IIANAS Trigger: ACTGGCGTTGGCGATTATCCACTCAAAACCAGCAGA...AATGACTATATCAGTGGACATAGTAACATGGAAGAGACAAAATTTCATGGGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057067.10 |
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| CDS-3UTR CCA 90 bp | GTACCTGCTTTCAATTACTTCTTGACTGTAGAAATTTATTGGAGTGCATTGGGATCTGCTGGTTTTGAGTaGATAATCGCCAACGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: VPAFNYFLTVEIYWSALGSAGFE*IIANAS Trigger: ACTGGCGTTGGCGATTATCCACTCAAAACCAGCAGA...TCCCAATGCACTCCAATAAATTTCTACAGTCAAGAAGTAATTGAAAGCAGGTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189832.7 |
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| CDS-3UTR TCA 90 bp | GTTGTTTTAGAGACTAGAGCTAGACTGTTGAGTGAAATAAGATATAATCCACGAAGTTTCCATCTCTGCTaGGTTCAAGAGAACACCGAG | + |
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Preference number: 4 (lower is better) Translates to: VVLETRARLLSEIRYNPRSFHLC*VQENTE Trigger: CTCGGTGTTCTCTTGAACTCAGCAGAGATGGAAACT...TCGTGGATTATATCTTATTTCACTCAACAGTCTAGCTCTAGTCTCTAAAACAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057067.10 ENSMUST00000189391.2 |
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| CDS-3UTR GCA 90 bp | TATGGCTTGGCTCTCACTGATAAGTACAAAGATTTGTCTCCTTTGTGCTTTTACACTCTGTATATTCTCTaGTGCTTCTGTCTGCTGGTT | + |
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Preference number: 4 (lower is better) Translates to: YGLALTDKYKDLSPLCFYTLYIL*CFCLLV Trigger: AACCAGCAGACAGAAGCAGCAGAGAATATACAGAGT...GTAAAAGCACAAAGGAGACAAATCTTTGTACTTATCAGTGAGAGCCAAGCCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189832.7 |
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| CDS-3UTR GCA 90 bp | GTTGTTTTAGAGACTAGAGCTAGACTGTTGAGTGAAATAAGATATAATCCACGATCTGCATTTCTGGGATaGTGTGATCCATGTGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: VVLETRARLLSEIRYNPRSAFLG*CDPCVQ Trigger: CTGCACACATGGATCACAGCATCCCAGAAATGCAGA...TCGTGGATTATATCTTATTTCACTCAACAGTCTAGCTCTAGTCTCTAAAACAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057067.10 ENSMUST00000189391.2 |
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| CDS-3UTR CCA 90 bp | GAGCCCATGAAATTTTGTCTCTTCCATGTTACTATGTCCACTGATATAGTCATTGTTTTGATTTCCATGTaGACTCCTTCTGGGTCACCA | + |
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Preference number: 4 (lower is better) Translates to: EPMKFCLFHVTMSTDIVIVLISM*TPSGSP Trigger: TGGTGACCCAGAAGGAGTCCACATGGAAATCAAAAC...AATGACTATATCAGTGGACATAGTAACATGGAAGAGACAAAATTTCATGGGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057067.10 |
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| CDS-3UTR TCA 90 bp | GAGCCCATGAAATTTTGTCTCTTCCATGTTACTATGTCCACTGATATAGTCATTGGTTCCTGTAAAATGTaGTCAGGGCATCTAACAACT | + |
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Preference number: 4 (lower is better) Translates to: EPMKFCLFHVTMSTDIVIGSCKM*SGHLTT Trigger: AGTTGTTAGATGCCCTGATCACATTTTACAGGAACC...AATGACTATATCAGTGGACATAGTAACATGGAAGAGACAAAATTTCATGGGCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057067.10 |
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| CDS-3UTR TCA 90 bp | CTTGACTGTAGAAATTTATTGGAGTGCATTGGGATTTTACTCCCAATCATCAACGGTTCCTGTAAAATGTaGTCAGGGCATCTAACAACT | + |
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Preference number: 4 (lower is better) Translates to: LDCRNLLECIGILLPIINGSCKM*SGHLTT Trigger: AGTTGTTAGATGCCCTGATCACATTTTACAGGAACC...GTTGATGATTGGGAGTAAAATCCCAATGCACTCCAATAAATTTCTACAGTCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189832.7 |
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| CDS-3UTR TCA 90 bp | GTTGTTTTAGAGACTAGAGCTAGACTGTTGAGTGAAATAAGATATAATCCACGACCGAAAGTCGGAAGATaGCTTCATCATGCTTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: VVLETRARLLSEIRYNPRPKVGR*LHHASE Trigger: TTCAGAAGCATGATGAAGTCATCTTCCGACTTTCGG...TCGTGGATTATATCTTATTTCACTCAACAGTCTAGCTCTAGTCTCTAAAACAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057067.10 ENSMUST00000189391.2 |
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| CDS-3UTR GCA 90 bp | GAGCCCATGAAATTTTGTCTCTTCCATGTTACTATGTCCACTGATATAGTCATTACTCTGTATATTCTCTaGTGCTTCTGTCTGCTGGTT | + |
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Preference number: 4 (lower is better) Translates to: EPMKFCLFHVTMSTDIVITLYIL*CFCLLV Trigger: AACCAGCAGACAGAAGCAGCAGAGAATATACAGAGT...AATGACTATATCAGTGGACATAGTAACATGGAAGAGACAAAATTTCATGGGCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057067.10 |
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| CDS-3UTR GCA 90 bp | GTTGTTTTAGAGACTAGAGCTAGACTGTTGAGTGAAATAAGATATAATCCACGAGTGCTCTCCACAAAATaGTGGGATAATTCTGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: VVLETRARLLSEIRYNPRVLSTK*WDNSAG Trigger: ACCTGCAGAATTATCCCAGCATTTTGTGGAGAGCAC...TCGTGGATTATATCTTATTTCACTCAACAGTCTAGCTCTAGTCTCTAAAACAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057067.10 ENSMUST00000189391.2 |
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| CDS-3UTR GCA 90 bp | GAGCCCATGAAATTTTGTCTCTTCCATGTTACTATGTCCACTGATATAGTCATTGTGTCACATCATAAATaGCTTGATCCTGATCGATGG | + |
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Preference number: 4 (lower is better) Translates to: EPMKFCLFHVTMSTDIVIVSHHK*LDPDRW Trigger: CCATCGATCAGGATCAAGGCATTTATGATGTGACAC...AATGACTATATCAGTGGACATAGTAACATGGAAGAGACAAAATTTCATGGGCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057067.10 |
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| CDS-3UTR TCA 90 bp | AATCACCAAAGAAGACTGTCACCAAAGACTGTCACCTCTGTCCTTCATTTTATTCTCAGGAGAAGTTTTTaGCGTAATTGTAGAACTTCT | + |
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Preference number: 4 (lower is better) Translates to: NHQRRLSPKTVTSVLHFILRRSF*RNCRTS Trigger: AGAAGTTCTACAATTACGTCAAAAACTTCTCCTGAG...AATAAAATGAAGGACAGAGGTGACAGTCTTTGGTGACAGTCTTCTTTGGTGATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189832.7 |
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| CDS-3UTR TCA 90 bp | GTTGTTTTAGAGACTAGAGCTAGACTGTTGAGTGAAATAAGATATAATCCACGAGGTTCCTGTAAAATGTaGTCAGGGCATCTAACAACT | + |
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Preference number: 4 (lower is better) Translates to: VVLETRARLLSEIRYNPRGSCKM*SGHLTT Trigger: AGTTGTTAGATGCCCTGATCACATTTTACAGGAACC...TCGTGGATTATATCTTATTTCACTCAACAGTCTAGCTCTAGTCTCTAAAACAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057067.10 ENSMUST00000189391.2 |
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| CDS-3UTR GCA 90 bp | GTTGTTTTAGAGACTAGAGCTAGACTGTTGAGTGAAATAAGATATAATCCACGAGTGTCACATCATAAATaGCTTGATCCTGATCGATGG | + |
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Preference number: 4 (lower is better) Translates to: VVLETRARLLSEIRYNPRVSHHK*LDPDRW Trigger: CCATCGATCAGGATCAAGGCATTTATGATGTGACAC...TCGTGGATTATATCTTATTTCACTCAACAGTCTAGCTCTAGTCTCTAAAACAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057067.10 ENSMUST00000189391.2 |
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| CDS-3UTR TCA 90 bp | GTTGTTTTAGAGACTAGAGCTAGACTGTTGAGTGAAATAAGATATAATCCACGAATTCTTAAACAATCCTaGGGAAATCCTACTCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: VVLETRARLLSEIRYNPRILKQS*GNPTQE Trigger: CTCCTGAGTAGGATTTCCTCAGGATTGTTTAAGAAT...TCGTGGATTATATCTTATTTCACTCAACAGTCTAGCTCTAGTCTCTAAAACAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057067.10 |
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| CDS-3UTR GCA 90 bp | TATGGCTTGGCTCTCACTGATAAGTACAAAGATTTGTCTCCTTTGTGCTTTTACGCAGGTTCGTTTCTTTaGTCATTTGATAAAACACAT | + |
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Preference number: 4 (lower is better) Translates to: YGLALTDKYKDLSPLCFYAGSFL*SFDKTH Trigger: ATGTGTTTTATCAAATGAGCAAAGAAACGAACCTGC...GTAAAAGCACAAAGGAGACAAATCTTTGTACTTATCAGTGAGAGCCAAGCCATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189832.7 |
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| CDS-3UTR TCA 90 bp | GTTGTTTTAGAGACTAGAGCTAGACTGTTGAGTGAAATAAGATATAATCCACGACTCAGGAGAAGTTTTTaGCGTAATTGTAGAACTTCT | + |
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Preference number: 4 (lower is better) Translates to: VVLETRARLLSEIRYNPRLRRSF*RNCRTS Trigger: AGAAGTTCTACAATTACGTCAAAAACTTCTCCTGAG...TCGTGGATTATATCTTATTTCACTCAACAGTCTAGCTCTAGTCTCTAAAACAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057067.10 |
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| 3UTR CAA 72 bp | ACCTGCTTTCAATTACTTCTTGACTGTAGAAATTTATaGGAGTGCATTGGGATTTTACTCCCAATCATCAAC | + |
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Preference number: 4 (lower is better) Translates to: TCFQLLLDCRNL*ECIGILLPIIN Trigger: GTTGATGATTGGGAGTAAAATCCCAATGCACTCCAATAAATTTCTACAGTCAAGAAGTAATTGAAAGCAGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189832.7 |
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| CDS-3UTR GCA 90 bp | GTTGTTTTAGAGACTAGAGCTAGACTGTTGAGTGAAATAAGATATAATCCACGAGCAGGTTCGTTTCTTTaGTCATTTGATAAAACACAT | + |
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Preference number: 4 (lower is better) Translates to: VVLETRARLLSEIRYNPRAGSFL*SFDKTH Trigger: ATGTGTTTTATCAAATGAGCAAAGAAACGAACCTGC...TCGTGGATTATATCTTATTTCACTCAACAGTCTAGCTCTAGTCTCTAAAACAAC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057067.10 ENSMUST00000189391.2 |
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| CDS CCA 90 bp | AAGCCTGAATGCTGTCAGCAAGCTCCACAGGCAAAGCCTGATCGATaGCTCCCAGGTCATCCACAAAGCTGTTCACTTCTGATAGTAGCA | + |
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Preference number: 5 (lower is better) Translates to: KPECCQQAPQAKPDR*LPGHPQSCSLLIVA Trigger: TGCTACTATCAGAAGTGAACAGCTTTGTGGATGACCTGGGAGCCATCGATCAGGCTTTGCCTGTGGAGCTTGCTGACAGCATTCAGGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189832.7 |
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| CDS GCA 90 bp | GAAGAAATGTCTGCATTTCTGGGATGCTGTGATCCATGTGTGCAGTaGGATCTCCCTGCGGTGCCTGTTGAAGAACTTGTTCCAGAATCC | + |
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Preference number: 5 (lower is better) Translates to: EEMSAFLGCCDPCVQ*DLPAVPVEELVPES Trigger: GGATTCTGGAACAAGTTCTTCAACAGGCACCGCAGGGAGATCGCACTGCACACATGGATCACAGCATCCCAGAAATGCAGACATTTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057067.10 ENSMUST00000189391.2 |
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| CDS GCA 90 bp | CTTCTGAAGAAATGTCTGCATTTCTGGGATGCTGTGATCCATGTGTaGAGTGCGATCTCCCTGCGGTGCCTGTTGAAGAACTTGTTCCAG | + |
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Preference number: 5 (lower is better) Translates to: LLKKCLHFWDAVIHV*SAISLRCLLKNLFQ Trigger: CTGGAACAAGTTCTTCAACAGGCACCGCAGGGAGATCGCACTGCACACATGGATCACAGCATCCCAGAAATGCAGACATTTCTTCAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057067.10 ENSMUST00000189391.2 |
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| CDS CCA 90 bp | TCGGAAGATGACTTCATCATGCTTCTGAAGAAATGTCTGCATTTCTaGGATGCTGTGATCCATGTGTGCAGTGCGATCTCCCTGCGGTGC | + |
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Preference number: 5 (lower is better) Translates to: SEDDFIMLLKKCLHF*DAVIHVCSAISLRC Trigger: GCACCGCAGGGAGATCGCACTGCACACATGGATCACAGCATCCCAGAAATGCAGACATTTCTTCAGAAGCATGATGAAGTCATCTTCCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057067.10 ENSMUST00000189391.2 |
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| CDS CCA 90 bp | TCTGCTTCTAAGGCTTCAAGTTTTGATTTCCATGTGGACTCCTTCTaGGTCACCAAGGAAGCCAGGTACTCTGTATATTCTCTGCTGCTT | + |
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Preference number: 5 (lower is better) Translates to: SASKASSFDFHVDSF*VTKEARYSVYSLLL Trigger: AAGCAGCAGAGAATATACAGAGTACCTGGCTTCCTTGGTGACCCAGAAGGAGTCCACATGGAAATCAAAACTTGAAGCCTTAGAAGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057067.10 ENSMUST00000189832.7 |
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| CDS CCA 90 bp | AGGTACTCTGTATATTCTCTGCTGCTTCTGTCTGCTGGTTTTGAGTaGATAATCGCCAACGCCAGTGCCAGCTTTGAAGTTTTCAAATAC | + |
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Preference number: 5 (lower is better) Translates to: RYSVYSLLLLSAGFE*IIANASASFEVFKY Trigger: GTATTTGAAAACTTCAAAGCTGGCACTGGCGTTGGCGATTATCCACTCAAAACCAGCAGACAGAAGCAGCAGAGAATATACAGAGTACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057067.10 ENSMUST00000189832.7 |
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| CDS TCA 90 bp | AGTGGGTTAAGTATACTTTCAGACTACTGGATTCTGTCCATTTCTTaGGCTCCAGCAGATGTTGAAAGAACTGCATGTGAGAAGACAGGG | + |
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Preference number: 5 (lower is better) Translates to: SGLSILSDYWILSIS*APADVERTACEKTG Trigger: CCCTGTCTTCTCACATGCAGTTCTTTCAACATCTGCTGGAGCTCAAGAAATGGACAGAATCCAGTAGTCTGAAAGTATACTTAACCCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057067.10 ENSMUST00000189391.2 ENSMUST00000189832.7 |
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| CDS CCA 90 bp | ATTGTAGAACTTCTGCTTCTAAGGCTTCAAGTTTTGATTTCCATGTaGACTCCTTCTGGGTCACCAAGGAAGCCAGGTACTCTGTATATT | + |
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Preference number: 5 (lower is better) Translates to: IVELLLLRLQVLISM*TPSGSPRKPGTLYI Trigger: AATATACAGAGTACCTGGCTTCCTTGGTGACCCAGAAGGAGTCCACATGGAAATCAAAACTTGAAGCCTTAGAAGCAGAAGTTCTACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057067.10 ENSMUST00000189832.7 |
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| CDS-3UTR CAA 90 bp | GAGCCCATGAAATTTTGTCTCTTCCATGTTACTATGTCCACTGATATAGTCATTTCCCTGCGGTGCCTGTaGAAGAACTTGTTCCAGAAT | + |
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Preference number: 5 (lower is better) Translates to: EPMKFCLFHVTMSTDIVISLRCL*KNLFQN Trigger: ATTCTGGAACAAGTTCTTCAACAGGCACCGCAGGGA...AATGACTATATCAGTGGACATAGTAACATGGAAGAGACAAAATTTCATGGGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057067.10 |
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| CDS GCA 90 bp | GTGCTCTCCACAAAATGCTGGGATAATTCTGCAGGTTCGTTTCTTTaGTCATTTGATAAAACACATCCAGAGTCATCCATCAGTGTCAAT | + |
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Preference number: 5 (lower is better) Translates to: VLSTKCWDNSAGSFL*SFDKTHPESSISVN Trigger: ATTGACACTGATGGATGACTCTGGATGTGTTTTATCAAATGAGCAAAGAAACGAACCTGCAGAATTATCCCAGCATTTTGTGGAGAGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057067.10 ENSMUST00000189832.7 |
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| CDS-3UTR CAA 90 bp | CCTCTGTCCTTCATTTTATTTGCTGCAGGTGATCACTATCATTTAAAAGCCTTCACGCCAGTGCCAGCTTaGAAGTTTTCAAATACCATG | + |
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Preference number: 5 (lower is better) Translates to: PLSFILFAAGDHYHLKAFTPVPA*KFSNTM Trigger: CATGGTATTTGAAAACTTCAAAGCTGGCACTGGCGT...GAAGGCTTTTAAATGATAGTGATCACCTGCAGCAAATAAAATGAAGGACAGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000189832.7 |
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| CDS-3UTR CAA 90 bp | GTTGTTTTAGAGACTAGAGCTAGACTGTTGAGTGAAATAAGATATAATCCACGATCCCTGCGGTGCCTGTaGAAGAACTTGTTCCAGAAT | + |
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Preference number: 5 (lower is better) Translates to: VVLETRARLLSEIRYNPRSLRCL*KNLFQN Trigger: ATTCTGGAACAAGTTCTTCAACAGGCACCGCAGGGA...TCGTGGATTATATCTTATTTCACTCAACAGTCTAGCTCTAGTCTCTAAAACAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057067.10 ENSMUST00000189391.2 |
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| CDS-3UTR CAA 90 bp | GAGCCCATGAAATTTTGTCTCTTCCATGTTACTATGTCCACTGATATAGTCATTACGCCAGTGCCAGCTTaGAAGTTTTCAAATACCATG | + |
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Preference number: 5 (lower is better) Translates to: EPMKFCLFHVTMSTDIVITPVPA*KFSNTM Trigger: CATGGTATTTGAAAACTTCAAAGCTGGCACTGGCGT...AATGACTATATCAGTGGACATAGTAACATGGAAGAGACAAAATTTCATGGGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057067.10 |
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| CDS-3UTR CAA 90 bp | GTTGTTTTAGAGACTAGAGCTAGACTGTTGAGTGAAATAAGATATAATCCACGAGAGCTCCAGCAGATGTaGAAAGAACTGCATGTGAGA | + |
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Preference number: 5 (lower is better) Translates to: VVLETRARLLSEIRYNPRELQQM*KELHVR Trigger: TCTCACATGCAGTTCTTTCAACATCTGCTGGAGCTC...TCGTGGATTATATCTTATTTCACTCAACAGTCTAGCTCTAGTCTCTAAAACAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057067.10 ENSMUST00000189391.2 |
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| CDS-3UTR CAA 90 bp | GTTGTTTTAGAGACTAGAGCTAGACTGTTGAGTGAAATAAGATATAATCCACGACACATCATAAATGCCTaGATCCTGATCGATGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: VVLETRARLLSEIRYNPRHIINA*ILIDGS Trigger: GGAGCCATCGATCAGGATCAAGGCATTTATGATGTG...TCGTGGATTATATCTTATTTCACTCAACAGTCTAGCTCTAGTCTCTAAAACAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057067.10 ENSMUST00000189391.2 |
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| CDS-3UTR CAA 90 bp | GTTGTTTTAGAGACTAGAGCTAGACTGTTGAGTGAAATAAGATATAATCCACGATGCCTGTTGAAGAACTaGTTCCAGAATCCAAAACAG | + |
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Preference number: 5 (lower is better) Translates to: VVLETRARLLSEIRYNPRCLLKN*FQNPKQ Trigger: CTGTTTTGGATTCTGGAACAAGTTCTTCAACAGGCA...TCGTGGATTATATCTTATTTCACTCAACAGTCTAGCTCTAGTCTCTAAAACAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057067.10 ENSMUST00000189391.2 |
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| CDS-3UTR CAA 90 bp | GCTAAAATGATGACATTCCTCATGTGTATAGTGCACATTGAAGATGAACACCTTCGTTTCTTTGCTCATTaGATAAAACACATCCAGAGT | + |
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Preference number: 5 (lower is better) Translates to: AKMMTFLMCIVHIEDEHLRFFAH*IKHIQS Trigger: ACTCTGGATGTGTTTTATCAAATGAGCAAAGAAACG...AAGGTGTTCATCTTCAATGTGCACTATACACATGAGGAATGTCATCATTTTAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189832.7 |
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| CDS-3UTR CAA 90 bp | GTTGTTTTAGAGACTAGAGCTAGACTGTTGAGTGAAATAAGATATAATCCACGACGTTTCTTTGCTCATTaGATAAAACACATCCAGAGT | + |
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Preference number: 5 (lower is better) Translates to: VVLETRARLLSEIRYNPRRFFAH*IKHIQS Trigger: ACTCTGGATGTGTTTTATCAAATGAGCAAAGAAACG...TCGTGGATTATATCTTATTTCACTCAACAGTCTAGCTCTAGTCTCTAAAACAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057067.10 ENSMUST00000189391.2 |
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| CDS GCA 72 bp | TCTGCATTTCTGGGATGCTGTGATCCATGTGTGCAGTaGGATCTCCCTGCGGTGCCTGTTGAAGAACTTGTT | + |
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Preference number: 6 (lower is better) Translates to: SAFLGCCDPCVQ*DLPAVPVEELV Trigger: AACAAGTTCTTCAACAGGCACCGCAGGGAGATCGCACTGCACACATGGATCACAGCATCCCAGAAATGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057067.10 ENSMUST00000189391.2 |
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| CDS GCA 72 bp | AAATGTCTGCATTTCTGGGATGCTGTGATCCATGTGTaGAGTGCGATCTCCCTGCGGTGCCTGTTGAAGAAC | + |
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Preference number: 6 (lower is better) Translates to: KCLHFWDAVIHV*SAISLRCLLKN Trigger: GTTCTTCAACAGGCACCGCAGGGAGATCGCACTGCACACATGGATCACAGCATCCCAGAAATGCAGACATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057067.10 ENSMUST00000189391.2 |
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| CDS CAA 72 bp | ATCCATGTGTGCAGTGCGATCTCCCTGCGGTGCCTGTaGAAGAACTTGTTCCAGAATCCAAAACAGGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: IHVCSAISLRCL*KNLFQNPKQGE Trigger: TTCTCCCTGTTTTGGATTCTGGAACAAGTTCTTCAACAGGCACCGCAGGGAGATCGCACTGCACACATGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057067.10 ENSMUST00000189391.2 |
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| CDS CCA 72 bp | GTATATTCTCTGCTGCTTCTGTCTGCTGGTTTTGAGTaGATAATCGCCAACGCCAGTGCCAGCTTTGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: VYSLLLLSAGFE*IIANASASFEV Trigger: AACTTCAAAGCTGGCACTGGCGTTGGCGATTATCCACTCAAAACCAGCAGACAGAAGCAGCAGAGAATATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057067.10 ENSMUST00000189832.7 |
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| CDS CCA 72 bp | CTTCTGCTTCTAAGGCTTCAAGTTTTGATTTCCATGTaGACTCCTTCTGGGTCACCAAGGAAGCCAGGTACT | + |
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Preference number: 6 (lower is better) Translates to: LLLLRLQVLISM*TPSGSPRKPGT Trigger: AGTACCTGGCTTCCTTGGTGACCCAGAAGGAGTCCACATGGAAATCAAAACTTGAAGCCTTAGAAGCAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057067.10 ENSMUST00000189832.7 |
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| CDS GCA 72 bp | GGGAGAAAATATTTTCATAGCGTGTCACATCATAAATaGCTTGATCCTGATCGATGGCTCCCAGGTCATCCA | + |
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Preference number: 6 (lower is better) Translates to: GRKYFHSVSHHK*LDPDRWLPGHP Trigger: TGGATGACCTGGGAGCCATCGATCAGGATCAAGGCATTTATGATGTGACACGCTATGAAAATATTTTCTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057067.10 ENSMUST00000189391.2 |
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| CDS CAA 90 bp | GTTTTTGACGTAATTGTAGAACTTCTGCTTCTAAGGCTTCAAGTTTaGATTTCCATGTGGACTCCTTCTGGGTCACCAAGGAAGCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: VFDVIVELLLLRLQV*ISMWTPSGSPRKPG Trigger: ACCTGGCTTCCTTGGTGACCCAGAAGGAGTCCACATGGAAATCAAAACTTGAAGCCTTAGAAGCAGAAGTTCTACAATTACGTCAAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057067.10 ENSMUST00000189832.7 |
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| CDS TCA 72 bp | TGTCAATGTATTTTCAGAACTTGTAGGTTCCTGATCTaGCAACGTGGGGAGCACATCCGGTCCATTCTTAAA | + |
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Preference number: 6 (lower is better) Translates to: CQCIFRTCRFLI*QRGEHIRSILK Trigger: TTTAAGAATGGACCGGATGTGCTCCCCACGTTGTCAGATCAGGAACCTACAAGTTCTGAAAATACATTGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057067.10 ENSMUST00000189832.7 |
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| CDS CAA 72 bp | GTAATTGTAGAACTTCTGCTTCTAAGGCTTCAAGTTTaGATTTCCATGTGGACTCCTTCTGGGTCACCAAGG | + |
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Preference number: 6 (lower is better) Translates to: VIVELLLLRLQV*ISMWTPSGSPR Trigger: CCTTGGTGACCCAGAAGGAGTCCACATGGAAATCAAAACTTGAAGCCTTAGAAGCAGAAGTTCTACAATTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057067.10 ENSMUST00000189832.7 |
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| CDS TCA 72 bp | AGTATACTTTCAGACTACTGGATTCTGTCCATTTCTTaGGCTCCAGCAGATGTTGAAAGAACTGCATGTGAG | + |
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Preference number: 6 (lower is better) Translates to: SILSDYWILSIS*APADVERTACE Trigger: CTCACATGCAGTTCTTTCAACATCTGCTGGAGCTCAAGAAATGGACAGAATCCAGTAGTCTGAAAGTATACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057067.10 ENSMUST00000189391.2 ENSMUST00000189832.7 |
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| CDS TCA 72 bp | AACAATCCTGAGGAAATCCTACTCAGGAGAAGTTTTTaGCGTAATTGTAGAACTTCTGCTTCTAAGGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: NNPEEILLRRSF*RNCRTSASKAS Trigger: TGAAGCCTTAGAAGCAGAAGTTCTACAATTACGTCAAAAACTTCTCCTGAGTAGGATTTCCTCAGGATTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057067.10 ENSMUST00000189832.7 |
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