RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MEI1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000068117

Ensembl transcript IDs: ENSMUST00000089178.11, ENSMUST00000186125.2, ENSMUST00000188048.7, ENSMUST00000189540.7, ENSMUST00000229119.2

Found 426 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGCACCAAGGACAGGAGGTTCAGCAGCAGCGGCAGGTTCCCTCCTaGGGTGGACGCTCCATACTCCACCAGGAGGCGCTGCAGGATGAG +
Preference number: 1 (lower is better)
Translates to: LHQGQEVQQQRQVPS*GGRSILHQEALQDE
Trigger: CTCATCCTGCAGCGCCTCCTGGTGGAGTATGGAGCGTCCACCTCAGGAGGGAACCTGCCGCTGCTGCTGAACCTCCTGTCCTTGGTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR TCA 90 bp AGGAGAGCAGTGGCGTCCTGGGGGAGGAGCCTGTTTCCGTCCAGGTaGGGGCCAGCATCTTCTCCAGGAGCTCAAGCAAGGCTGTGCTGC +
Preference number: 1 (lower is better)
Translates to: RRAVASWGRSLFPSR*GPASSPGAQARLCC
Trigger: GCAGCACAGCCTTGCTTGAGCTCCTGGAGAAGATGCTGGCCCTCACCTGGACGGAAACAGGCTCCTCCCCCAGGACGCCACTGCTCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR TCA 90 bp GGTGCCCGAACCTGCTCATCAACCCTGGATAGGCCAGGAAGAACCTaGGCAGGAGCGGGTGGTGAGTGTAGACCCCACGCAGGTCTGGGA +
Preference number: 1 (lower is better)
Translates to: GARTCSSTLDRPGRT*AGAGGECRPHAGLG
Trigger: TCCCAGACCTGCGTGGGGTCTACACTCACCACCCGCTCCTGCTCAGGTTCTTCCTGGCCTATCCAGGGTTGATGAGCAGGTTCGGGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR GCA 90 bp CACTGTCCTTGTCCCCGCACACTGCCAGCAGATACATGGAGGCTTTaGAGACCACTGGTGGCGGGCACTCACCCTGGTCCTGCAGAGACA +
Preference number: 1 (lower is better)
Translates to: HCPCPRTLPADTWRL*RPLVAGTHPGPAET
Trigger: TGTCTCTGCAGGACCAGGGTGAGTGCCCGCCACCAGTGGTCTGCAAAGCCTCCATGTATCTGCTGGCAGTGTGCGGGGACAAGGACAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR GCA 90 bp ATGGAGGCTTTGCAGACCACTGGTGGCGGGCACTCACCCTGGTCCTaGAGAGACAAAAGGAAGCTCTGCACAGCCACAAAGAGCTCCGCC +
Preference number: 1 (lower is better)
Translates to: MEALQTTGGGHSPWS*RDKRKLCTATKSSA
Trigger: GGCGGAGCTCTTTGTGGCTGTGCAGAGCTTCCTTTTGTCTCTGCAGGACCAGGGTGAGTGCCCGCCACCAGTGGTCTGCAAAGCCTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR CCA 90 bp CCCGCACACTGCCAGCAGATACATGGAGGCTTTGCAGACCACTGGTaGCGGGCACTCACCCTGGTCCTGCAGAGACAAAAGGAAGCTCTG +
Preference number: 1 (lower is better)
Translates to: PAHCQQIHGGFADHW*RALTLVLQRQKEAL
Trigger: CAGAGCTTCCTTTTGTCTCTGCAGGACCAGGGTGAGTGCCCGCCACCAGTGGTCTGCAAAGCCTCCATGTATCTGCTGGCAGTGTGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR CCA 90 bp GTCCCCGCACACTGCCAGCAGATACATGGAGGCTTTGCAGACCACTaGTGGCGGGCACTCACCCTGGTCCTGCAGAGACAAAAGGAAGCT +
Preference number: 1 (lower is better)
Translates to: VPAHCQQIHGGFADH*WRALTLVLQRQKEA
Trigger: AGCTTCCTTTTGTCTCTGCAGGACCAGGGTGAGTGCCCGCCACCAGTGGTCTGCAAAGCCTCCATGTATCTGCTGGCAGTGTGCGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR TCA 90 bp TTCGGGCTGTATCCACGGGGCTGGAATAGACCAGGTCCAGCAAAATaGGTAGGATGCTGGGCGTGCTCTGGAGCACACGGAACAGGGCTG +
Preference number: 1 (lower is better)
Translates to: FGLYPRGWNRPGPAK*VGCWACSGAHGTGL
Trigger: CAGCCCTGTTCCGTGTGCTCCAGAGCACGCCCAGCATCCTACTCATTTTGCTGGACCTGGTCTATTCCAGCCCCGTGGATACAGCCCGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR CCA 90 bp GAGCCAGGTAGAAGAGGAGGAGGATGCAGTACTGTCTCTGGCGCGTaGCCGCCTCCACATACTGCCGATCTGACAGGAAGGCAAGGCTTT +
Preference number: 1 (lower is better)
Translates to: EPGRRGGGCSTVSGA*PPPHTADLTGRQGF
Trigger: AAAGCCTTGCCTTCCTGTCAGATCGGCAGTATGTGGAGGCGGCCACGCGCCAGAGACAGTACTGCATCCTCCTCCTCTTCTACCTGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR CCA 90 bp TCTCCAGCATCCAAGAGGGTGAACAGCAGAAACCGATTCCAGGGCTaGGAGGCCACATGGAGCGCAATGTCTGGGCTCCTGGCATGCAAG +
Preference number: 1 (lower is better)
Translates to: SPASKRVNSRNRFQG*EATWSAMSGLLACK
Trigger: CTTGCATGCCAGGAGCCCAGACATTGCGCTCCATGTGGCCTCCCAGCCCTGGAATCGGTTTCTGCTGTTCACCCTCTTGGATGCTGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR GCA 90 bp CAAACCTGTCATCGTGGATGTGAGCCAGGTAGAAGAGGAGGAGGATaGAGTACTGTCTCTGGCGCGTGGCCGCCTCCACATACTGCCGAT +
Preference number: 1 (lower is better)
Translates to: QTCHRGCEPGRRGGG*STVSGAWPPPHTAD
Trigger: ATCGGCAGTATGTGGAGGCGGCCACGCGCCAGAGACAGTACTGCATCCTCCTCCTCTTCTACCTGGCTCACATCCACGATGACAGGTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR GCA 90 bp TTCATGGCCATGCTGTCCAGCTCTTGTTCCGACTCATTCCTCATCTaGACCAAGGACAGGAGGTTCAGCAGCAGCGGCAGGTTCCCTCCT +
Preference number: 1 (lower is better)
Translates to: FMAMLSSSCSDSFLI*TKDRRFSSSGRFPP
Trigger: AGGAGGGAACCTGCCGCTGCTGCTGAACCTCCTGTCCTTGGTGCAGATGAGGAATGAGTCGGAACAAGAGCTGGACAGCATGGCCATGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR CCA 90 bp AGATACATGGAGGCTTTGCAGACCACTGGTGGCGGGCACTCACCCTaGTCCTGCAGAGACAAAAGGAAGCTCTGCACAGCCACAAAGAGC +
Preference number: 1 (lower is better)
Translates to: RYMEALQTTGGGHSP*SCRDKRKLCTATKS
Trigger: GCTCTTTGTGGCTGTGCAGAGCTTCCTTTTGTCTCTGCAGGACCAGGGTGAGTGCCCGCCACCAGTGGTCTGCAAAGCCTCCATGTATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR TCA 90 bp TTTCCTAGCGGAGCTAGGACAGCGTCCTCAGGAGTTGACAGCGGTTaGTCCCCTGAGGGTACCAAGACCACCAAGGCAGAGGAAAAGCTT +
Preference number: 1 (lower is better)
Translates to: FPSGARTASSGVDSG*SPEGTKTTKAEEKL
Trigger: AAGCTTTTCCTCTGCCTTGGTGGTCTTGGTACCCTCAGGGGATCAACCGCTGTCAACTCCTGAGGACGCTGTCCTAGCTCCGCTAGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR GCA 90 bp GGCTGGGCTGGGAAGGTGCGGGAGCAAAGGCCTTCCAAAGATGATTaGAAGGTCTGGGTCATGTGTTGGTCATTTAGGAGACCCATGCTC +
Preference number: 1 (lower is better)
Translates to: GWAGKVREQRPSKDD*KVWVMCWSFRRPML
Trigger: GAGCATGGGTCTCCTAAATGACCAACACATGACCCAGACCTTGCAATCATCTTTGGAAGGCCTTTGCTCCCGCACCTTCCCAGCCCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR GCA 90 bp TCCCCTGAGGGTACCAAGACCACCAAGGCAGAGGAAAAGCTTTGTTaGAAGGCTGTCCGCAGGAATCGTAGGATGGCAGCTGACAGCAAT +
Preference number: 1 (lower is better)
Translates to: SPEGTKTTKAEEKLC*KAVRRNRRMAADSN
Trigger: ATTGCTGTCAGCTGCCATCCTACGATTCCTGCGGACAGCCTTGCAACAAAGCTTTTCCTCTGCCTTGGTGGTCTTGGTACCCTCAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR CCA 90 bp GGGAAGGTGCGGGAGCAAAGGCCTTCCAAAGATGATTGCAAGGTCTaGGTCATGTGTTGGTCATTTAGGAGACCCATGCTCTGGACCTGC +
Preference number: 1 (lower is better)
Translates to: GKVREQRPSKDDCKV*VMCWSFRRPMLWTC
Trigger: GCAGGTCCAGAGCATGGGTCTCCTAAATGACCAACACATGACCCAGACCTTGCAATCATCTTTGGAAGGCCTTTGCTCCCGCACCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR TCA 90 bp TCTGGCTACTGGGTGTGGTCTGATGAAGACTCCAGTACAAGAAGTTaGAGGAGGGCTGCAGGATATCCACATGTGCAGGGCTGCACTTCC +
Preference number: 1 (lower is better)
Translates to: SGYWVWSDEDSSTRS*RRAAGYPHVQGCTS
Trigger: GGAAGTGCAGCCCTGCACATGTGGATATCCTGCAGCCCTCCTTCAACTTCTTGTACTGGAGTCTTCATCAGACCACACCCAGTAGCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR CCA 90 bp GGCTGCACTTCCCACACAGCATGCTCACTTGATGAAGCAGCTTCATaGCCATGCTGTCCAGCTCTTGTTCCGACTCATTCCTCATCTGCA +
Preference number: 1 (lower is better)
Translates to: GCTSHTACSLDEAAS*PCCPALVPTHSSSA
Trigger: TGCAGATGAGGAATGAGTCGGAACAAGAGCTGGACAGCATGGCCATGAAGCTGCTTCATCAAGTGAGCATGCTGTGTGGGAAGTGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR TCA 90 bp CATTGTTTTCTGTTTCTGGGCCTTTATGTCCTGAGGCTCAGCCTCTaGTGTGAGCCTGGGAAACAGACACACCTCCGAGGCAGAGCATGT +
Preference number: 1 (lower is better)
Translates to: HCFLFLGLYVLRLSL*CEPGKQTHLRGRAC
Trigger: ACATGCTCTGCCTCGGAGGTGTGTCTGTTTCCCAGGCTCACATCAGAGGCTGAGCCTCAGGACATAAAGGCCCAGAAACAGAAAACAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR GCA 90 bp ACTTCCCACACAGCATGCTCACTTGATGAAGCAGCTTCATGGCCATaGTGTCCAGCTCTTGTTCCGACTCATTCCTCATCTGCACCAAGG +
Preference number: 1 (lower is better)
Translates to: TSHTACSLDEAASWP*CPALVPTHSSSAPR
Trigger: CCTTGGTGCAGATGAGGAATGAGTCGGAACAAGAGCTGGACAGCATGGCCATGAAGCTGCTTCATCAAGTGAGCATGCTGTGTGGGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR GCA 90 bp ACTCCAGTACAAGAAGTTGAAGGAGGGCTGCAGGATATCCACATGTaGAGGGCTGCACTTCCCACACAGCATGCTCACTTGATGAAGCAG +
Preference number: 1 (lower is better)
Translates to: TPVQEVEGGLQDIHM*RAALPTQHAHLMKQ
Trigger: CTGCTTCATCAAGTGAGCATGCTGTGTGGGAAGTGCAGCCCTGCACATGTGGATATCCTGCAGCCCTCCTTCAACTTCTTGTACTGGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR CCA 90 bp GAGCAAAGGCCTTCCAAAGATGATTGCAAGGTCTGGGTCATGTGTTaGTCATTTAGGAGACCCATGCTCTGGACCTGCAGGAGGAAGCCA +
Preference number: 1 (lower is better)
Translates to: EQRPSKDDCKVWVMC*SFRRPMLWTCRRKP
Trigger: TGGCTTCCTCCTGCAGGTCCAGAGCATGGGTCTCCTAAATGACCAACACATGACCCAGACCTTGCAATCATCTTTGGAAGGCCTTTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR TCA 90 bp GTAGGATGGCAGCTGACAGCAATGCAGACATCTTCTTTGGAAAGCTaGGAGCCTTCAATACTTGGTTCAGTTCCACAGATAATGTCCGAT +
Preference number: 1 (lower is better)
Translates to: VGWQLTAMQTSSLES*EPSILGSVPQIMSD
Trigger: ATCGGACATTATCTGTGGAACTGAACCAAGTATTGAAGGCTCTCAGCTTTCCAAAGAAGATGTCTGCATTGCTGTCAGCTGCCATCCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR CCA 90 bp AGCAATGCAGACATCTTCTTTGGAAAGCTGAGAGCCTTCAATACTTaGTTCAGTTCCACAGATAATGTCCGATGGACCTGCAAATTGCCA +
Preference number: 1 (lower is better)
Translates to: SNADIFFGKLRAFNT*FSSTDNVRWTCKLP
Trigger: TGGCAATTTGCAGGTCCATCGGACATTATCTGTGGAACTGAACCAAGTATTGAAGGCTCTCAGCTTTCCAAAGAAGATGTCTGCATTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR CAA 90 bp GCACTGTCCTTGTCCCCGCACACTGCCAGCAGATACATGGAGGCTTaGCAGACCACTGGTGGCGGGCACTCACCCTGGTCCTGCAGAGAC +
Preference number: 2 (lower is better)
Translates to: ALSLSPHTASRYMEA*QTTGGGHSPWSCRD
Trigger: GTCTCTGCAGGACCAGGGTGAGTGCCCGCCACCAGTGGTCTGCAAAGCCTCCATGTATCTGCTGGCAGTGTGCGGGGACAAGGACAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR CAA 90 bp AGGATGCTGGGCGTGCTCTGGAGCACACGGAACAGGGCTGCGAGGTaGGCGGGAAAGACTGTACGCCCAGGAGAGGAGTCATCATCTAGG +
Preference number: 2 (lower is better)
Translates to: RMLGVLWSTRNRAAR*AGKTVRPGEESSSR
Trigger: CCTAGATGATGACTCCTCTCCTGGGCGTACAGTCTTTCCCGCCAACCTCGCAGCCCTGTTCCGTGTGCTCCAGAGCACGCCCAGCATCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR-3UTR GCA 90 bp GCCTCTGATGTGAGCCTGGGAAACAGACACACCTCCGAGGCAGAGCATGTCTTGCACACGGAACAGGGCTaGGAGGTTGGCGGGAAAGAC +
Preference number: 2 (lower is better)
Translates to: ASDVSLGNRHTSEAEHVLHTEQG*EVGGKD
Trigger: GTCTTTCCCGCCAACCTCGCAGCCCTGTTCCGTGTG...CAAGACATGCTCTGCCTCGGAGGTGTGTCTGTTTCCCAGGCTCACATCAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR-3UTR CCA 90 bp AGCATCCAAGAGGGTGAACAGCAGAAACCGATTCCAGGGCTGGGAGGCCACATGTTTGCAGACCACTGGTaGCGGGCACTCACCCTGGTC +
Preference number: 2 (lower is better)
Translates to: SIQEGEQQKPIPGLGGHMFADHW*RALTLV
Trigger: GACCAGGGTGAGTGCCCGCCACCAGTGGTCTGCAAA...CATGTGGCCTCCCAGCCCTGGAATCGGTTTCTGCTGTTCACCCTCTTGGATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR-3UTR CCA 90 bp AGCATCCAAGAGGGTGAACAGCAGAAACCGATTCCAGGGCTGGGAGGCCACATGACAGGGCTGCGAGGTTaGCGGGAAAGACTGTACGCC +
Preference number: 2 (lower is better)
Translates to: SIQEGEQQKPIPGLGGHMTGLRG*RERLYA
Trigger: GGCGTACAGTCTTTCCCGCCAACCTCGCAGCCCTGT...CATGTGGCCTCCCAGCCCTGGAATCGGTTTCTGCTGTTCACCCTCTTGGATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR CAA 90 bp GCACTTGTGACTTTCCTAGCGGAGCTAGGACAGCGTCCTCAGGAGTaGACAGCGGTTGATCCCCTGAGGGTACCAAGACCACCAAGGCAG +
Preference number: 2 (lower is better)
Translates to: ALVTFLAELGQRPQE*TAVDPLRVPRPPRQ
Trigger: CTGCCTTGGTGGTCTTGGTACCCTCAGGGGATCAACCGCTGTCAACTCCTGAGGACGCTGTCCTAGCTCCGCTAGGAAAGTCACAAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR CAA 90 bp CGCTGCAGGATGAGCAGAAAGTGGCCTCGGATGAGGCCACCCACCTaGACATCCTCATTCTCCCAAAGGAACACCCTCAGGACAATCAGG +
Preference number: 2 (lower is better)
Translates to: RCRMSRKWPRMRPPT*TSSFSQRNTLRTIR
Trigger: CCTGATTGTCCTGAGGGTGTTCCTTTGGGAGAATGAGGATGTCAAGGTGGGTGGCCTCATCCGAGGCCACTTTCTGCTCATCCTGCAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR-3UTR GCA 90 bp GACCTTTCGGGCTGTATCCACGGGGCTGGAATAGACCAGGTCCAGCAAAATGAGGATACATGGAGGCTTTaGAGACCACTGGTGGCGGGC +
Preference number: 2 (lower is better)
Translates to: DLSGCIHGAGIDQVQQNEDTWRL*RPLVAG
Trigger: GCCCGCCACCAGTGGTCTGCAAAGCCTCCATGTATC...CTCATTTTGCTGGACCTGGTCTATTCCAGCCCCGTGGATACAGCCCGAAAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR-3UTR CCA 90 bp TCTAGGAACTTTCTGATTGCACTGATCACGGCCTCAGCCAGTGCACTGTCCTTGACTGTCTCTGGCGCGTaGCCGCCTCCACATACTGCC +
Preference number: 2 (lower is better)
Translates to: SRNFLIALITASASALSLTVSGA*PPPHTA
Trigger: GGCAGTATGTGGAGGCGGCCACGCGCCAGAGACAGT...CAAGGACAGTGCACTGGCTGAGGCCGTGATCAGTGCAATCAGAAAGTTCCTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR-3UTR CCA 90 bp CAGCTTCATGGCCATGCTGTCCAGCTCTTGTTCCGACTCATTCCTCATCTGCACATGCAGTACTGTCTCTaGCGCGTGGCCGCCTCCACA +
Preference number: 2 (lower is better)
Translates to: QLHGHAVQLLFRLIPHLHMQYCL*RVAAST
Trigger: TGTGGAGGCGGCCACGCGCCAGAGACAGTACTGCAT...GTGCAGATGAGGAATGAGTCGGAACAAGAGCTGGACAGCATGGCCATGAAGCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR CAA 90 bp AACTTTCTGATTGCACTGATCACGGCCTCAGCCAGTGCACTGTCCTaGTCCCCGCACACTGCCAGCAGATACATGGAGGCTTTGCAGACC +
Preference number: 2 (lower is better)
Translates to: NFLIALITASASALS*SPHTASRYMEALQT
Trigger: GGTCTGCAAAGCCTCCATGTATCTGCTGGCAGTGTGCGGGGACAAGGACAGTGCACTGGCTGAGGCCGTGATCAGTGCAATCAGAAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR-3UTR TCA 90 bp GCTGCTCCGGTACTGCACAAACAAGGTCATAAGTCTCAGTATCTCAGGTCTGAGAGGCCAGGAAGAACCTaGGCAGGAGCGGGTGGTGAG +
Preference number: 2 (lower is better)
Translates to: AAPVLHKQGHKSQYLRSERPGRT*AGAGGE
Trigger: CTCACCACCCGCTCCTGCTCAGGTTCTTCCTGGCCT...CTCAGACCTGAGATACTGAGACTTATGACCTTGTTTGTGCAGTACCGGAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR-3UTR CCA 90 bp GACCTTTCGGGCTGTATCCACGGGGCTGGAATAGACCAGGTCCAGCAAAATGAGGTCCTGCTGCTTATGTaGGGCAGTCCATGCTGTAGG +
Preference number: 2 (lower is better)
Translates to: DLSGCIHGAGIDQVQQNEVLLLM*GSPCCR
Trigger: CCTACAGCATGGACTGCCCCACATAAGCAGCAGGAC...CTCATTTTGCTGGACCTGGTCTATTCCAGCCCCGTGGATACAGCCCGAAAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR-3UTR CCA 90 bp GCCTCTGATGTGAGCCTGGGAAACAGACACACCTCCGAGGCAGAGCATGTCTTGGAAGGCAAGGCTTTCTaGGGTCCTGCTGCTTATGTG +
Preference number: 2 (lower is better)
Translates to: ASDVSLGNRHTSEAEHVLEGKAF*GPAAYV
Trigger: CACATAAGCAGCAGGACCCCAGAAAGCCTTGCCTTC...CAAGACATGCTCTGCCTCGGAGGTGTGTCTGTTTCCCAGGCTCACATCAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR-3UTR GCA 90 bp TCTAGGAACTTTCTGATTGCACTGATCACGGCCTCAGCCAGTGCACTGTCCTTGGGCTTTCTGGGGTCCTaGTGCTTATGTGGGGCAGTC +
Preference number: 2 (lower is better)
Translates to: SRNFLIALITASASALSLGFLGS*CLCGAV
Trigger: GACTGCCCCACATAAGCAGCAGGACCCCAGAAAGCC...CAAGGACAGTGCACTGGCTGAGGCCGTGATCAGTGCAATCAGAAAGTTCCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR-3UTR GCA 90 bp GCTGCTCCGGTACTGCACAAACAAGGTCATAAGTCTCAGTATCTCAGGTCTGAGGCCGCCTCCACATACTaGCGATCTGACAGGAAGGCA +
Preference number: 2 (lower is better)
Translates to: AAPVLHKQGHKSQYLRSEAASTY*RSDRKA
Trigger: TGCCTTCCTGTCAGATCGGCAGTATGTGGAGGCGGC...CTCAGACCTGAGATACTGAGACTTATGACCTTGTTTGTGCAGTACCGGAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR-3UTR GCA 90 bp TCTAGGAACTTTCTGATTGCACTGATCACGGCCTCAGCCAGTGCACTGTCCTTGAGAAGAGGAGGAGGATaGAGTACTGTCTCTGGCGCG +
Preference number: 2 (lower is better)
Translates to: SRNFLIALITASASALSLRRGGG*STVSGA
Trigger: CGCGCCAGAGACAGTACTGCATCCTCCTCCTCTTCT...CAAGGACAGTGCACTGGCTGAGGCCGTGATCAGTGCAATCAGAAAGTTCCTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR-3UTR GCA 90 bp AGCATCCAAGAGGGTGAACAGCAGAAACCGATTCCAGGGCTGGGAGGCCACATGAAGTTGAAGGAGGGCTaGAGGATATCCACATGTGCA +
Preference number: 2 (lower is better)
Translates to: SIQEGEQQKPIPGLGGHMKLKEG*RISTCA
Trigger: TGCACATGTGGATATCCTGCAGCCCTCCTTCAACTT...CATGTGGCCTCCCAGCCCTGGAATCGGTTTCTGCTGTTCACCCTCTTGGATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR-3UTR CCA 90 bp GCCTCTGATGTGAGCCTGGGAAACAGACACACCTCCGAGGCAGAGCATGTCTTGCTCTTTTCTGGCTACTaGGTGTGGTCTGATGAAGAC +
Preference number: 2 (lower is better)
Translates to: ASDVSLGNRHTSEAEHVLLFSGY*VWSDED
Trigger: GTCTTCATCAGACCACACCCAGTAGCCAGAAAAGAG...CAAGACATGCTCTGCCTCGGAGGTGTGTCTGTTTCCCAGGCTCACATCAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR CAA 90 bp CATGCTCACTTGATGAAGCAGCTTCATGGCCATGCTGTCCAGCTCTaGTTCCGACTCATTCCTCATCTGCACCAAGGACAGGAGGTTCAG +
Preference number: 2 (lower is better)
Translates to: HAHLMKQLHGHAVQL*FRLIPHLHQGQEVQ
Trigger: CTGAACCTCCTGTCCTTGGTGCAGATGAGGAATGAGTCGGAACAAGAGCTGGACAGCATGGCCATGAAGCTGCTTCATCAAGTGAGCATG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR-3UTR TCA 90 bp TCTAGGAACTTTCTGATTGCACTGATCACGGCCTCAGCCAGTGCACTGTCCTTGCACATACTGCCGATCTaGCAGGAAGGCAAGGCTTTC +
Preference number: 2 (lower is better)
Translates to: SRNFLIALITASASALSLHILPI*QEGKAF
Trigger: GAAAGCCTTGCCTTCCTGTCAGATCGGCAGTATGTG...CAAGGACAGTGCACTGGCTGAGGCCGTGATCAGTGCAATCAGAAAGTTCCTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR-3UTR GCA 90 bp CATGGCCATGCTGTCCAGCTCTTGTTCCGACTCATTCCTCATCTGCACCAAGGAGACAAAAGGAAGCTCTaGACAGCCACAAAGAGCTCC +
Preference number: 2 (lower is better)
Translates to: HGHAVQLLFRLIPHLHQGDKRKL*TATKSS
Trigger: GGAGCTCTTTGTGGCTGTGCAGAGCTTCCTTTTGTC...TCCTTGGTGCAGATGAGGAATGAGTCGGAACAAGAGCTGGACAGCATGGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR-3UTR GCA 90 bp GCTGCTCCGGTACTGCACAAACAAGGTCATAAGTCTCAGTATCTCAGGTCTGAGGCAGCTTCATGGCCATaGTGTCCAGCTCTTGTTCCG +
Preference number: 2 (lower is better)
Translates to: AAPVLHKQGHKSQYLRSEAASWP*CPALVP
Trigger: CGGAACAAGAGCTGGACAGCATGGCCATGAAGCTGC...CTCAGACCTGAGATACTGAGACTTATGACCTTGTTTGTGCAGTACCGGAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR-3UTR GCA 90 bp AGGTCTGGGTCATGTGTTGGTCATTTAGGAGACCCATGCTCTGGACCTGCAGGATGCAAATTGCCATTGTaGTGCTGGGCAGAGAAGGAG +
Preference number: 2 (lower is better)
Translates to: RSGSCVGHLGDPCSGPAGCKLPL*CWAEKE
Trigger: CTCCTTCTCTGCCCAGCAGCACAATGGCAATTTGCA...TCCTGCAGGTCCAGAGCATGGGTCTCCTAAATGACCAACACATGACCCAGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR-3UTR GCA 90 bp TGCACAAACAAGGTCATAAGTCTCAGTATCTCAGGTCTGAGGAAGGAATTCTCTCACGGCCTCAGCCAGTaGACTGTCCTTGTCCCCGCA +
Preference number: 2 (lower is better)
Translates to: CTNKVISLSISGLRKEFSHGLSQ*TVLVPA
Trigger: TGCGGGGACAAGGACAGTGCACTGGCTGAGGCCGTG...AGAGAATTCCTTCCTCAGACCTGAGATACTGAGACTTATGACCTTGTTTGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR-3UTR GCA 90 bp GCTGCTCCGGTACTGCACAAACAAGGTCATAAGTCTCAGTATCTCAGGTCTGAGCAGGATATCCACATGTaGAGGGCTGCACTTCCCACA +
Preference number: 2 (lower is better)
Translates to: AAPVLHKQGHKSQYLRSEQDIHM*RAALPT
Trigger: TGTGGGAAGTGCAGCCCTGCACATGTGGATATCCTG...CTCAGACCTGAGATACTGAGACTTATGACCTTGTTTGTGCAGTACCGGAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR-3UTR CCA 90 bp AGGTCTGGGTCATGTGTTGGTCATTTAGGAGACCCATGCTCTGGACCTGCAGGACAATGTCTGGGCTCCTaGCATGCAAGTAATCTAGCA +
Preference number: 2 (lower is better)
Translates to: RSGSCVGHLGDPCSGPAGQCLGS*HASNLA
Trigger: TGCTAGATTACTTGCATGCCAGGAGCCCAGACATTG...TCCTGCAGGTCCAGAGCATGGGTCTCCTAAATGACCAACACATGACCCAGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR-3UTR GCA 90 bp GCTGCTCCGGTACTGCACAAACAAGGTCATAAGTCTCAGTATCTCAGGTCTGAGAAATTGCCATTGTGCTaGTGGGCAGAGAAGGAGGCA +
Preference number: 2 (lower is better)
Translates to: AAPVLHKQGHKSQYLRSEKLPLC*WAEKEA
Trigger: TGCCTCCTTCTCTGCCCAGCAGCACAATGGCAATTT...CTCAGACCTGAGATACTGAGACTTATGACCTTGTTTGTGCAGTACCGGAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR-3UTR CCA 90 bp AGACATCTTCTTTGGAAAGCTGAGAGCCTTCAATACTTGGTTCAGTTCCACAGAGGCGGGCACTCACCCTaGTCCTGCAGAGACAAAAGG +
Preference number: 2 (lower is better)
Translates to: RHLLWKAESLQYLVQFHRGGHSP*SCRDKR
Trigger: CCTTTTGTCTCTGCAGGACCAGGGTGAGTGCCCGCC...TCTGTGGAACTGAACCAAGTATTGAAGGCTCTCAGCTTTCCAAAGAAGATGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR-3UTR GCA 90 bp TGCACAAACAAGGTCATAAGTCTCAGTATCTCAGGTCTGAGGAAGGAATTCTCTCAAGCAAGGCTGTGCTaGTCAGCAGGACAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: CTNKVISLSISGLRKEFSQARLC*SAGQQQ
Trigger: CTGCTGCTGTCCTGCTGAGCAGCACAGCCTTGCTTG...AGAGAATTCCTTCCTCAGACCTGAGATACTGAGACTTATGACCTTGTTTGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR-3UTR GCA 90 bp AGACATCTTCTTTGGAAAGCTGAGAGCCTTCAATACTTGGTTCAGTTCCACAGACACTCACCCTGGTCCTaGAGAGACAAAAGGAAGCTC +
Preference number: 2 (lower is better)
Translates to: RHLLWKAESLQYLVQFHRHSPWS*RDKRKL
Trigger: GAGCTTCCTTTTGTCTCTGCAGGACCAGGGTGAGTG...TCTGTGGAACTGAACCAAGTATTGAAGGCTCTCAGCTTTCCAAAGAAGATGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR-3UTR GCA 90 bp AGACATCTTCTTTGGAAAGCTGAGAGCCTTCAATACTTGGTTCAGTTCCACAGAGATGGACCTGCAAATTaGCATTGTGCTGCTGGGCAG +
Preference number: 2 (lower is better)
Translates to: RHLLWKAESLQYLVQFHRDGPAN*HCAAGQ
Trigger: CTGCCCAGCAGCACAATGGCAATTTGCAGGTCCATC...TCTGTGGAACTGAACCAAGTATTGAAGGCTCTCAGCTTTCCAAAGAAGATGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR TCA 72 bp GGACAGGAGGTTCAGCAGCAGCGGCAGGTTCCCTCCTaGGGTGGACGCTCCATACTCCACCAGGAGGCGCTG +
Preference number: 3 (lower is better)
Translates to: GQEVQQQRQVPS*GGRSILHQEAL
Trigger: CAGCGCCTCCTGGTGGAGTATGGAGCGTCCACCTCAGGAGGGAACCTGCCGCTGCTGCTGAACCTCCTGTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR CCA 72 bp GGAGGTTCAGCAGCAGCGGCAGGTTCCCTCCTGAGGTaGACGCTCCATACTCCACCAGGAGGCGCTGCAGGA +
Preference number: 3 (lower is better)
Translates to: GGSAAAAGSLLR*TLHTPPGGAAG
Trigger: TCCTGCAGCGCCTCCTGGTGGAGTATGGAGCGTCCACCTCAGGAGGGAACCTGCCGCTGCTGCTGAACCTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR CCA 72 bp GCGTGCTCTGGAGCACACGGAACAGGGCTGCGAGGTTaGCGGGAAAGACTGTACGCCCAGGAGAGGAGTCAT +
Preference number: 3 (lower is better)
Translates to: ACSGAHGTGLRG*RERLYAQERSH
Trigger: ATGACTCCTCTCCTGGGCGTACAGTCTTTCCCGCCAACCTCGCAGCCCTGTTCCGTGTGCTCCAGAGCACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR GCA 72 bp CAGTACTGTCTCTGGCGCGTGGCCGCCTCCACATACTaGCGATCTGACAGGAAGGCAAGGCTTTCTGGGGTC +
Preference number: 3 (lower is better)
Translates to: QYCLWRVAASTY*RSDRKARLSGV
Trigger: GACCCCAGAAAGCCTTGCCTTCCTGTCAGATCGGCAGTATGTGGAGGCGGCCACGCGCCAGAGACAGTACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR CCA 72 bp AGGTCCAGCAAAATGAGTAGGATGCTGGGCGTGCTCTaGAGCACACGGAACAGGGCTGCGAGGTTGGCGGGA +
Preference number: 3 (lower is better)
Translates to: RSSKMSRMLGVL*STRNRAARLAG
Trigger: TCCCGCCAACCTCGCAGCCCTGTTCCGTGTGCTCCAGAGCACGCCCAGCATCCTACTCATTTTGCTGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR TCA 72 bp ACCTGCTCATCAACCCTGGATAGGCCAGGAAGAACCTaGGCAGGAGCGGGTGGTGAGTGTAGACCCCACGCA +
Preference number: 3 (lower is better)
Translates to: TCSSTLDRPGRT*AGAGGECRPHA
Trigger: TGCGTGGGGTCTACACTCACCACCCGCTCCTGCTCAGGTTCTTCCTGGCCTATCCAGGGTTGATGAGCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR TCA 72 bp GGAGCTAGGACAGCGTCCTCAGGAGTTGACAGCGGTTaGTCCCCTGAGGGTACCAAGACCACCAAGGCAGAG +
Preference number: 3 (lower is better)
Translates to: GARTASSGVDSG*SPEGTKTTKAE
Trigger: CTCTGCCTTGGTGGTCTTGGTACCCTCAGGGGATCAACCGCTGTCAACTCCTGAGGACGCTGTCCTAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR GCA 72 bp CATCGTGGATGTGAGCCAGGTAGAAGAGGAGGAGGATaGAGTACTGTCTCTGGCGCGTGGCCGCCTCCACAT +
Preference number: 3 (lower is better)
Translates to: HRGCEPGRRGGG*STVSGAWPPPH
Trigger: ATGTGGAGGCGGCCACGCGCCAGAGACAGTACTGCATCCTCCTCCTCTTCTACCTGGCTCACATCCACGATG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR CCA 72 bp AGAAGAGGAGGAGGATGCAGTACTGTCTCTGGCGCGTaGCCGCCTCCACATACTGCCGATCTGACAGGAAGG +
Preference number: 3 (lower is better)
Translates to: RRGGGCSTVSGA*PPPHTADLTGR
Trigger: CCTTCCTGTCAGATCGGCAGTATGTGGAGGCGGCCACGCGCCAGAGACAGTACTGCATCCTCCTCCTCTTCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR CCA 72 bp CACTGCCAGCAGATACATGGAGGCTTTGCAGACCACTaGTGGCGGGCACTCACCCTGGTCCTGCAGAGACAA +
Preference number: 3 (lower is better)
Translates to: HCQQIHGGFADH*WRALTLVLQRQ
Trigger: TTGTCTCTGCAGGACCAGGGTGAGTGCCCGCCACCAGTGGTCTGCAAAGCCTCCATGTATCTGCTGGCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR TCA 72 bp TGGGAAACAGACACACCTCCGAGGCAGAGCATGTCTTaGAAGAGTGGCTGGGCTGGGAAGGTGCGGGAGCAA +
Preference number: 3 (lower is better)
Translates to: WETDTPPRQSMS*KSGWAGKVREQ
Trigger: TTGCTCCCGCACCTTCCCAGCCCAGCCACTCTTTCAAGACATGCTCTGCCTCGGAGGTGTGTCTGTTTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR TCA 72 bp TCTGGGCCTTTATGTCCTGAGGCTCAGCCTCTGATGTaGGCCTGGGAAACAGACACACCTCCGAGGCAGAGC +
Preference number: 3 (lower is better)
Translates to: SGPLCPEAQPLM*AWETDTPPRQS
Trigger: GCTCTGCCTCGGAGGTGTGTCTGTTTCCCAGGCTCACATCAGAGGCTGAGCCTCAGGACATAAAGGCCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR CCA 72 bp TGCCAGCAGATACATGGAGGCTTTGCAGACCACTGGTaGCGGGCACTCACCCTGGTCCTGCAGAGACAAAAG +
Preference number: 3 (lower is better)
Translates to: CQQIHGGFADHW*RALTLVLQRQK
Trigger: CTTTTGTCTCTGCAGGACCAGGGTGAGTGCCCGCCACCAGTGGTCTGCAAAGCCTCCATGTATCTGCTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR TCA 72 bp CTGTTTCTGGGCCTTTATGTCCTGAGGCTCAGCCTCTaGTGTGAGCCTGGGAAACAGACACACCTCCGAGGC +
Preference number: 3 (lower is better)
Translates to: LFLGLYVLRLSL*CEPGKQTHLRG
Trigger: GCCTCGGAGGTGTGTCTGTTTCCCAGGCTCACATCAGAGGCTGAGCCTCAGGACATAAAGGCCCAGAAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR GCA 72 bp ATGCTGTCCAGCTCTTGTTCCGACTCATTCCTCATCTaGACCAAGGACAGGAGGTTCAGCAGCAGCGGCAGG +
Preference number: 3 (lower is better)
Translates to: MLSSSCSDSFLI*TKDRRFSSSGR
Trigger: CCTGCCGCTGCTGCTGAACCTCCTGTCCTTGGTGCAGATGAGGAATGAGTCGGAACAAGAGCTGGACAGCAT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR GCA 72 bp CAAGAAGTTGAAGGAGGGCTGCAGGATATCCACATGTaGAGGGCTGCACTTCCCACACAGCATGCTCACTTG +
Preference number: 3 (lower is better)
Translates to: QEVEGGLQDIHM*RAALPTQHAHL
Trigger: CAAGTGAGCATGCTGTGTGGGAAGTGCAGCCCTGCACATGTGGATATCCTGCAGCCCTCCTTCAACTTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR GCA 72 bp TATCCACATGTGCAGGGCTGCACTTCCCACACAGCATaGTCACTTGATGAAGCAGCTTCATGGCCATGCTGT +
Preference number: 3 (lower is better)
Translates to: YPHVQGCTSHTA*SLDEAASWPCC
Trigger: ACAGCATGGCCATGAAGCTGCTTCATCAAGTGAGCATGCTGTGTGGGAAGTGCAGCCCTGCACATGTGGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR CCA 72 bp TCCCACACAGCATGCTCACTTGATGAAGCAGCTTCATaGCCATGCTGTCCAGCTCTTGTTCCGACTCATTCC +
Preference number: 3 (lower is better)
Translates to: SHTACSLDEAAS*PCCPALVPTHS
Trigger: GGAATGAGTCGGAACAAGAGCTGGACAGCATGGCCATGAAGCTGCTTCATCAAGTGAGCATGCTGTGTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR-3UTR CAA 90 bp CCACAGATAATGTCCGATGGACCTGCAAATTGCCATTGTGCTGCTGGGCAGAGACATGCTGTCCAGCTCTaGTTCCGACTCATTCCTCAT +
Preference number: 3 (lower is better)
Translates to: PQIMSDGPANCHCAAGQRHAVQL*FRLIPH
Trigger: ATGAGGAATGAGTCGGAACAAGAGCTGGACAGCATG...TCTCTGCCCAGCAGCACAATGGCAATTTGCAGGTCCATCGGACATTATCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR GCA 72 bp GGGAAGGTGCGGGAGCAAAGGCCTTCCAAAGATGATTaGAAGGTCTGGGTCATGTGTTGGTCATTTAGGAGA +
Preference number: 3 (lower is better)
Translates to: GKVREQRPSKDD*KVWVMCWSFRR
Trigger: TCTCCTAAATGACCAACACATGACCCAGACCTTGCAATCATCTTTGGAAGGCCTTTGCTCCCGCACCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR CCA 72 bp CCTTCCAAAGATGATTGCAAGGTCTGGGTCATGTGTTaGTCATTTAGGAGACCCATGCTCTGGACCTGCAGG +
Preference number: 3 (lower is better)
Translates to: PSKDDCKVWVMC*SFRRPMLWTCR
Trigger: CCTGCAGGTCCAGAGCATGGGTCTCCTAAATGACCAACACATGACCCAGACCTTGCAATCATCTTTGGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR GCA 72 bp ACAGCATGCTCACTTGATGAAGCAGCTTCATGGCCATaGTGTCCAGCTCTTGTTCCGACTCATTCCTCATCT +
Preference number: 3 (lower is better)
Translates to: TACSLDEAASWP*CPALVPTHSSS
Trigger: AGATGAGGAATGAGTCGGAACAAGAGCTGGACAGCATGGCCATGAAGCTGCTTCATCAAGTGAGCATGCTGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR CCA 72 bp AGCTTTGTTGCAAGGCTGTCCGCAGGAATCGTAGGATaGCAGCTGACAGCAATGCAGACATCTTCTTTGGAA +
Preference number: 3 (lower is better)
Translates to: SFVARLSAGIVG*QLTAMQTSSLE
Trigger: TTCCAAAGAAGATGTCTGCATTGCTGTCAGCTGCCATCCTACGATTCCTGCGGACAGCCTTGCAACAAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR CCA 72 bp GACATCTTCTTTGGAAAGCTGAGAGCCTTCAATACTTaGTTCAGTTCCACAGATAATGTCCGATGGACCTGC +
Preference number: 3 (lower is better)
Translates to: DIFFGKLRAFNT*FSSTDNVRWTC
Trigger: GCAGGTCCATCGGACATTATCTGTGGAACTGAACCAAGTATTGAAGGCTCTCAGCTTTCCAAAGAAGATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR CAA 72 bp TTGTCCCCGCACACTGCCAGCAGATACATGGAGGCTTaGCAGACCACTGGTGGCGGGCACTCACCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LSPHTASRYMEA*QTTGGGHSPWS
Trigger: GGACCAGGGTGAGTGCCCGCCACCAGTGGTCTGCAAAGCCTCCATGTATCTGCTGGCAGTGTGCGGGGACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
CDS-3UTR CCA 90 bp CAGGACCTTTCGGGCTGTATCCACGGGGCTGGAATAGACCAGGTCCAGCAAAATCTGCTCACGGCCTCCTaGAGGGCACGGCTGGCATCT +
Preference number: 4 (lower is better)
Translates to: QDLSGCIHGAGIDQVQQNLLTAS*RARLAS
Trigger: AGATGCCAGCCGTGCCCTCCAGGAGGCCGTGAGCAG...ATTTTGCTGGACCTGGTCTATTCCAGCCCCGTGGATACAGCCCGAAAGGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
CDS-3UTR CCA 90 bp ATAGGCCAGGAAGAACCTGAGCAGGAGCGGGTGGTGAGTGTAGACCCCACGCAGGGCCACTGCAGAATCTaGCCTTCAGCTCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: IGQEEPEQERVVSVDPTQGHCRI*PSAPGS
Trigger: TGACCCTGGAGCTGAAGGCCAGATTCTGCAGTGGCC...CTGCGTGGGGTCTACACTCACCACCCGCTCCTGCTCAGGTTCTTCCTGGCCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
CDS-3UTR TCA 90 bp CTTCCCACACAGCATGCTCACTTGATGAAGCAGCTTCATGGCCATGCTGTCCAGCTGCACTGGGAGCTGTaGAGGGGTTCTCCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: LPTQHAHLMKQLHGHAVQLHWEL*RGSPGR
Trigger: CCGCCCAGGAGAACCCCTTCACAGCTCCCAGTGCAG...CTGGACAGCATGGCCATGAAGCTGCTTCATCAAGTGAGCATGCTGTGTGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
CDS-3UTR CCA 90 bp GCCTCTGATGTGAGCCTGGGAAACAGACACACCTCCGAGGCAGAGCATGTCTTGGCGGAAGGCTCGCCTTaGAATTCCACAGCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: ASDVSLGNRHTSEAEHVLAEGSP*NSTASL
Trigger: CAGGCTGGCTGTGGAATTCCAAGGCGAGCCTTCCGC...CAAGACATGCTCTGCCTCGGAGGTGTGTCTGTTTCCCAGGCTCACATCAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
3UTR CAA 72 bp ATTGCACTGATCACGGCCTCAGCCAGTGCACTGTCCTaGTCCCCGCACACTGCCAGCAGATACATGGAGGCT +
Preference number: 4 (lower is better)
Translates to: IALITASASALS*SPHTASRYMEA
Trigger: AGCCTCCATGTATCTGCTGGCAGTGTGCGGGGACAAGGACAGTGCACTGGCTGAGGCCGTGATCAGTGCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
CDS-3UTR TCA 90 bp CCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCAGGCCATGCAGACGTaGGGGGACACGGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PERGLILFSPSTIMPGICQAMQT*GDTGSS
Trigger: GCTGCTGCCCGTGTCCCCTCACGTCTGCATGGCCTG...ACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000229119.2
CDS-3UTR TCA 90 bp AATAGCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGCTGCACTGGGAGCTGTaGAGGGGTTCTCCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: NSSRERLDIVFPLNHYARLHWEL*RGSPGR
Trigger: CCGCCCAGGAGAACCCCTTCACAGCTCCCAGTGCAG...CCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGCTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR TCA 90 bp AGCATCCAAGAGGGTGAACAGCAGAAACCGATTCCAGGGCTGGGAGGCCACATGGGGAGTCACAGGCACTaGGAAGATACTCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: SIQEGEQQKPIPGLGGHMGSHRH*EDTLRR
Trigger: CCTTCTCAGAGTATCTTCTCAGTGCCTGTGACTCCC...CATGTGGCCTCCCAGCCCTGGAATCGGTTTCTGCTGTTCACCCTCTTGGATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
CDS-3UTR CCA 90 bp AGCCAGTGCACTGTCCTTGTCCCCGCACACTGCCAGCAGATACATGGAGGCTTTCAGCCTGATCTCCTCTaGCTGCCGAGTCAGAATTTC +
Preference number: 4 (lower is better)
Translates to: SQCTVLVPAHCQQIHGGFQPDLL*LPSQNF
Trigger: GAAATTCTGACTCGGCAGCCAGAGGAGATCAGGCTG...AAAGCCTCCATGTATCTGCTGGCAGTGTGCGGGGACAAGGACAGTGCACTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
CDS-3UTR CCA 90 bp ATAGCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGACTGCTCACGGCCTCCTaGAGGGCACGGCTGGCATCT +
Preference number: 4 (lower is better)
Translates to: IAPERGLILFSPSTIMPGLLTAS*RARLAS
Trigger: AGATGCCAGCCGTGCCCTCCAGGAGGCCGTGAGCAG...TCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGTTTTCTGTTGGCAGAGGAGAGCAGTaGCGTCCTGGGGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: SPSTIMPGICLQVSLFSVGRGEQ*RPGGGA
Trigger: GGCTCCTCCCCCAGGACGCCACTGCTCTCCTCTGCC...AACAGAAAACAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp GAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGGGCAGAGGAGAGCAGTaGCGTCCTGGGGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: ERGLILFSPSTIMPGICLGRGEQ*RPGGGA
Trigger: GGCTCCTCCCCCAGGACGCCACTGCTCTCCTCTGCC...CAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR TCA 90 bp TCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGCTGCACTGGGAGCTGTaGAGGGGTTCTCCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: SRERLDIVFPLNHYARNLLHWEL*RGSPGR
Trigger: CCGCCCAGGAGAACCCCTTCACAGCTCCCAGTGCAG...CAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp AAAGAGCTCCGCCTCAGGGACAAACCTGTCATCGTGGATGTGAGCCAGGTAGAATCATCACCATCGGGATaGACTGGGAGTCACAGGCAC +
Preference number: 4 (lower is better)
Translates to: KELRLRDKPVIVDVSQVESSPSG*TGSHRH
Trigger: GTGCCTGTGACTCCCAGTGCATCCCGATGGTGATGA...TTCTACCTGGCTCACATCCACGATGACAGGTTTGTCCCTGAGGCGGAGCTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
CDS-3UTR GCA 90 bp GCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTGCTGGGCTGGGAAGGTaGGGGAGCAAAGGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: APERGLILFSPSTIMPGIAGLGR*GSKGLP
Trigger: TGGAAGGCCTTTGCTCCCGCACCTTCCCAGCCCAGC...AATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp CAGCTTCATGGCCATGCTGTCCAGCTCTTGTTCCGACTCATTCCTCATCTGCACACCATCGGGATGCACTaGGAGTCACAGGCACTGAGA +
Preference number: 4 (lower is better)
Translates to: QLHGHAVQLLFRLIPHLHTIGMH*ESQALR
Trigger: TCTCAGTGCCTGTGACTCCCAGTGCATCCCGATGGT...GTGCAGATGAGGAATGAGTCGGAACAAGAGCTGGACAGCATGGCCATGAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
CDS-3UTR CCA 90 bp GCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTAGAGCAGTGGCGTCCTaGGGGAGGAGCCTGTTTCCG +
Preference number: 4 (lower is better)
Translates to: APERGLILFSPSTIMPGIRAVAS*GRSLFP
Trigger: CGGAAACAGGCTCCTCCCCCAGGACGCCACTGCTCT...AATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp ATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGGGCAGAGGAGAGCAGTaGCGTCCTGGGGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: ILFSPSTIMPGICLQVSLGRGEQ*RPGGGA
Trigger: GGCTCCTCCCCCAGGACGCCACTGCTCTCCTCTGCC...CAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp CTTCCCACACAGCATGCTCACTTGATGAAGCAGCTTCATGGCCATGCTGTCCAGCTGCAGAGAGTTCTCTaGCCACTGCAGAATCTGGCC +
Preference number: 4 (lower is better)
Translates to: LPTQHAHLMKQLHGHAVQLQRVL*PLQNLA
Trigger: GGCCAGATTCTGCAGTGGCCAGAGAACTCTCTGCAG...CTGGACAGCATGGCCATGAAGCTGCTTCATCAAGTGAGCATGCTGTGTGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
CDS-3UTR TCA 90 bp TCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGAGGCCAGGAAGAACCTaGGCAGGAGCGGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: SRERLDIVFPLNHYARNLRPGRT*AGAGGE
Trigger: CTCACCACCCGCTCCTGCTCAGGTTCTTCCTGGCCT...CAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR TCA 90 bp GAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGGGAGGCGCTGCAGGATaGGCAGAAAGTGGCCTCGGA +
Preference number: 4 (lower is better)
Translates to: ERGLILFSPSTIMPGICLGGAAG*AESGLG
Trigger: TCCGAGGCCACTTTCTGCTCATCCTGCAGCGCCTCC...CAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR TCA 90 bp TCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGGGAGGCGCTGCAGGATaGGCAGAAAGTGGCCTCGGA +
Preference number: 4 (lower is better)
Translates to: SRERLDIVFPLNHYARNLGGAAG*AESGLG
Trigger: TCCGAGGCCACTTTCTGCTCATCCTGCAGCGCCTCC...CAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR TCA 90 bp CCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTGGAGGCGCTGCAGGATaGGCAGAAAGTGGCCTCGGA +
Preference number: 4 (lower is better)
Translates to: PERGLILFSPSTIMPGICGGAAG*AESGLG
Trigger: TCCGAGGCCACTTTCTGCTCATCCTGCAGCGCCTCC...ACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp GCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGGTGTCCACCAGCTTaGCCAGGAGAGTCGTGGTGG +
Preference number: 4 (lower is better)
Translates to: APERGLILFSPSTIMPGIWCPPA*PGESWW
Trigger: CCACCACGACTCTCCTGGGCAAGCTGGTGGACACCA...AATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp CCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCACGGCCTCAGCCAGTaGACTGTCCTTGTCCCCGCA +
Preference number: 4 (lower is better)
Translates to: PERGLILFSPSTIMPGICHGLSQ*TVLVPA
Trigger: TGCGGGGACAAGGACAGTGCACTGGCTGAGGCCGTG...ACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp GAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGCACGGCCTCAGCCAGTaGACTGTCCTTGTCCCCGCA +
Preference number: 4 (lower is better)
Translates to: ERGLILFSPSTIMPGICLHGLSQ*TVLVPA
Trigger: TGCGGGGACAAGGACAGTGCACTGGCTGAGGCCGTG...CAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp ATAGCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGACACACGGAACAGGGCTaGGAGGTTGGCGGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: IAPERGLILFSPSTIMPGHTEQG*EVGGKD
Trigger: GTCTTTCCCGCCAACCTCGCAGCCCTGTTCCGTGTG...TCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGATCTGCTGGCTGCCCTaGAGGCTCCTGACCACTGCC +
Preference number: 4 (lower is better)
Translates to: SRERLDIVFPLNHYARNLICWLP*RLLTTA
Trigger: GGCAGTGGTCAGGAGCCTCCAGGGCAGCCAGCAGAT...CAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp ATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGCCTGGAGGGCACGGCTaGCATCTCTGCACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: ILFSPSTIMPGICLQVSLPGGHG*HLCTGL
Trigger: CAGCCCTGTGCAGAGATGCCAGCCGTGCCCTCCAGG...CAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp ATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGCTGCTCACGGCCTCCTaGAGGGCACGGCTGGCATCT +
Preference number: 4 (lower is better)
Translates to: ILFSPSTIMPGICLQVSLLLTAS*RARLAS
Trigger: AGATGCCAGCCGTGCCCTCCAGGAGGCCGTGAGCAG...CAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp CATGGCCATGCTGTCCAGCTCTTGTTCCGACTCATTCCTCATCTGCACCAAGGATCAGAAAAGCTGAAATaGCCCTCAGTGCTTCGGCGG +
Preference number: 4 (lower is better)
Translates to: HGHAVQLLFRLIPHLHQGSEKLK*PSVLRR
Trigger: CCGCCGAAGCACTGAGGGCCATTTCAGCTTTTCTGA...TCCTTGGTGCAGATGAGGAATGAGTCGGAACAAGAGCTGGACAGCATGGCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
CDS-3UTR CCA 90 bp ATAGCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAGCGGAAGGCTCGCCTTaGAATTCCACAGCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: IAPERGLILFSPSTIMPGAEGSP*NSTASL
Trigger: CAGGCTGGCTGTGGAATTCCAAGGCGAGCCTTCCGC...TCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGTTTTCTGTTACTGTCTCTGGCGCGTaGCCGCCTCCACATACTGCC +
Preference number: 4 (lower is better)
Translates to: SPSTIMPGICLQVSLFSVTVSGA*PPPHTA
Trigger: GGCAGTATGTGGAGGCGGCCACGCGCCAGAGACAGT...AACAGAAAACAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp ATAGCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAGGCGGGCACTCACCCTaGTCCTGCAGAGACAAAAGG +
Preference number: 4 (lower is better)
Translates to: IAPERGLILFSPSTIMPGGGHSP*SCRDKR
Trigger: CCTTTTGTCTCTGCAGGACCAGGGTGAGTGCCCGCC...TCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp AATAGCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGTTTGCAGACCACTGGTaGCGGGCACTCACCCTGGTC +
Preference number: 4 (lower is better)
Translates to: NSSRERLDIVFPLNHYARFADHW*RALTLV
Trigger: GACCAGGGTGAGTGCCCGCCACCAGTGGTCTGCAAA...CCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGCTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGTTTTCTGTTAGAGCAGTGGCGTCCTaGGGGAGGAGCCTGTTTCCG +
Preference number: 4 (lower is better)
Translates to: SPSTIMPGICLQVSLFSVRAVAS*GRSLFP
Trigger: CGGAAACAGGCTCCTCCCCCAGGACGCCACTGCTCT...AACAGAAAACAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR TCA 90 bp TTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATACTGCACTGGGAGCTGTaGAGGGGTTCTCCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: FPIPFPLWCKIAPERGLILHWEL*RGSPGR
Trigger: CCGCCCAGGAGAACCCCTTCACAGCTCCCAGTGCAG...TATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR TCA 90 bp GCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTAGGCAGAGCATGTCTTaGAAGAGTGGCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: APERGLILFSPSTIMPGIRQSMS*KSGWAG
Trigger: CCCAGCCCAGCCACTCTTTCAAGACATGCTCTGCCT...AATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR TCA 90 bp ATAGCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAAGGCAGAGCATGTCTTaGAAGAGTGGCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: IAPERGLILFSPSTIMPGRQSMS*KSGWAG
Trigger: CCCAGCCCAGCCACTCTTTCAAGACATGCTCTGCCT...TCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp ATAGCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAGGCTTTCTGGGGTCCTaGTGCTTATGTGGGGCAGTC +
Preference number: 4 (lower is better)
Translates to: IAPERGLILFSPSTIMPGGFLGS*CLCGAV
Trigger: GACTGCCCCACATAAGCAGCAGGACCCCAGAAAGCC...TCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp AATAGCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGGCCGCCTCCACATACTaGCGATCTGACAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: NSSRERLDIVFPLNHYARAASTY*RSDRKA
Trigger: TGCCTTCCTGTCAGATCGGCAGTATGTGGAGGCGGC...CCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGCTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp GCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTGATACATGGAGGCTTTaGAGACCACTGGTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: APERGLILFSPSTIMPGIDTWRL*RPLVAG
Trigger: GCCCGCCACCAGTGGTCTGCAAAGCCTCCATGTATC...AATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp ATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGCACGGCCTCAGCCAGTaGACTGTCCTTGTCCCCGCA +
Preference number: 4 (lower is better)
Translates to: ILFSPSTIMPGICLQVSLHGLSQ*TVLVPA
Trigger: TGCGGGGACAAGGACAGTGCACTGGCTGAGGCCGTG...CAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGTTTTCTGTTCCCATGCTCTGGACCTaGAGGAGGAAGCCATGCAGG +
Preference number: 4 (lower is better)
Translates to: SPSTIMPGICLQVSLFSVPMLWT*RRKPCR
Trigger: CCTGCATGGCTTCCTCCTGCAGGTCCAGAGCATGGG...AACAGAAAACAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATATGCCCAGGAGAGTCGTaGTGGCCAGGCTGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: FPIPFPLWCKIAPERGLICPGES*WPGCLP
Trigger: TGGGAGGCAGCCTGGCCACCACGACTCTCCTGGGCA...TATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGGTGTTGGTCATCTGCTaGCTGCCCTGGAGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: SRERLDIVFPLNHYARNLVLVIC*LPWRLL
Trigger: CAGGAGCCTCCAGGGCAGCCAGCAGATGACCAACAC...CAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TGCACAAACAAGGTCATAAGTCTCAGTATCTCAGGTCTGAGGAAGGAATTCTCTCCTGGAGGGCACGGCTaGCATCTCTGCACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: CTNKVISLSISGLRKEFSPGGHG*HLCTGL
Trigger: CAGCCCTGTGCAGAGATGCCAGCCGTGCCCTCCAGG...AGAGAATTCCTTCCTCAGACCTGAGATACTGAGACTTATGACCTTGTTTGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
CDS-3UTR CCA 90 bp TTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATACCTGGAGGGCACGGCTaGCATCTCTGCACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: FPIPFPLWCKIAPERGLIPGGHG*HLCTGL
Trigger: CAGCCCTGTGCAGAGATGCCAGCCGTGCCCTCCAGG...TATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp CCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATATTGCTGCTCACGGCCTCCTaGAGGGCACGGCTGGCATCT +
Preference number: 4 (lower is better)
Translates to: PIPFPLWCKIAPERGLILLLTAS*RARLAS
Trigger: AGATGCCAGCCGTGCCCTCCAGGAGGCCGTGAGCAG...CAATATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp GAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGGCGGAAGGCTCGCCTTaGAATTCCACAGCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: ERGLILFSPSTIMPGICLAEGSP*NSTASL
Trigger: CAGGCTGGCTGTGGAATTCCAAGGCGAGCCTTCCGC...CAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGTTTTCTGTTACAGGGCTGCGAGGTTaGCGGGAAAGACTGTACGCC +
Preference number: 4 (lower is better)
Translates to: SPSTIMPGICLQVSLFSVTGLRG*RERLYA
Trigger: GGCGTACAGTCTTTCCCGCCAACCTCGCAGCCCTGT...AACAGAAAACAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR TCA 90 bp CATGGCCATGCTGTCCAGCTCTTGTTCCGACTCATTCCTCATCTGCACCAAGGAGAGTCAGAATTTCTTTaGAGAGCAGCAGTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: HGHAVQLLFRLIPHLHQGESEFL*RAAVPE
Trigger: CTCAGGGACTGCTGCTCTTCAAAGAAATTCTGACTC...TCCTTGGTGCAGATGAGGAATGAGTCGGAACAAGAGCTGGACAGCATGGCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
CDS-3UTR TCA 90 bp TTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATAAGGCCAGGAAGAACCTaGGCAGGAGCGGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: FPIPFPLWCKIAPERGLIRPGRT*AGAGGE
Trigger: CTCACCACCCGCTCCTGCTCAGGTTCTTCCTGGCCT...TATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR TCA 90 bp CCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATATTGAGGCCAGGAAGAACCTaGGCAGGAGCGGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: PIPFPLWCKIAPERGLILRPGRT*AGAGGE
Trigger: CTCACCACCCGCTCCTGCTCAGGTTCTTCCTGGCCT...CAATATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR TCA 90 bp GAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGCTGTTTCCGTCCAGGTaGGGGCCAGCATCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: ERGLILFSPSTIMPGICLLFPSR*GPASSP
Trigger: TGGAGAAGATGCTGGCCCTCACCTGGACGGAAACAG...CAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR TCA 90 bp TCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGTTTTCTGTTCTGTTTCCGTCCAGGTaGGGGCCAGCATCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SPSTIMPGICLQVSLFSVLFPSR*GPASSP
Trigger: TGGAGAAGATGCTGGCCCTCACCTGGACGGAAACAG...AACAGAAAACAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR TCA 90 bp TCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGAGGCAGAGCATGTCTTaGAAGAGTGGCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SRERLDIVFPLNHYARNLRQSMS*KSGWAG
Trigger: CCCAGCCCAGCCACTCTTTCAAGACATGCTCTGCCT...CAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTCGTGGTGGCCAGGCTaGCTCCCATGGAGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: FYFPIPFPLWCKIAPERGSWWPG*LPWSAG
Trigger: ACCTGCGCTCCATGGGAGGCAGCCTGGCCACCACGA...GCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGGGCTTTCTGGGGTCCTaGTGCTTATGTGGGGCAGTC +
Preference number: 4 (lower is better)
Translates to: SRERLDIVFPLNHYARNLGFLGS*CLCGAV
Trigger: GACTGCCCCACATAAGCAGCAGGACCCCAGAAAGCC...CAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp GCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTAGAAGAGGAGGAGGATaGAGTACTGTCTCTGGCGCG +
Preference number: 4 (lower is better)
Translates to: APERGLILFSPSTIMPGIRRGGG*STVSGA
Trigger: CGCGCCAGAGACAGTACTGCATCCTCCTCCTCTTCT...AATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGTTTTCTGTTGATACATGGAGGCTTTaGAGACCACTGGTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: SPSTIMPGICLQVSLFSVDTWRL*RPLVAG
Trigger: GCCCGCCACCAGTGGTCTGCAAAGCCTCCATGTATC...AACAGAAAACAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp GCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTGCAGCTTCATGGCCATaGTGTCCAGCTCTTGTTCCG +
Preference number: 4 (lower is better)
Translates to: APERGLILFSPSTIMPGIAASWP*CPALVP
Trigger: CGGAACAAGAGCTGGACAGCATGGCCATGAAGCTGC...AATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGCCACATGTGCAGGGCTaGACTTCCCACACAGCATGC +
Preference number: 4 (lower is better)
Translates to: SRERLDIVFPLNHYARNLPHVQG*TSHTAC
Trigger: GCATGCTGTGTGGGAAGTGCAGCCCTGCACATGTGG...CAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGCAAGCAAGGCTGTGCTaGTCAGCAGGACAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SRERLDIVFPLNHYARNLQARLC*SAGQQQ
Trigger: CTGCTGCTGTCCTGCTGAGCAGCACAGCCTTGCTTG...CAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp CCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATATTGGCTGGGCTGGGAAGGTaGGGGAGCAAAGGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: PIPFPLWCKIAPERGLILAGLGR*GSKGLP
Trigger: TGGAAGGCCTTTGCTCCCGCACCTTCCCAGCCCAGC...CAATATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp GAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGGGGCGCTGTCCAAGGTaGAAAGGAAGAGGGCACACA +
Preference number: 4 (lower is better)
Translates to: ERGLILFSPSTIMPGICLGRCPR*KGRGHT
Trigger: TGTGTGCCCTCTTCCTTTCCACCTTGGACAGCGCCC...CAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp ATAGCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGATGCTTCGCCGGGGAATaGACCAGCACTGCCGTTATA +
Preference number: 4 (lower is better)
Translates to: IAPERGLILFSPSTIMPGCFAGE*TSTAVI
Trigger: TATAACGGCAGTGCTGGTCCATTCCCCGGCGAAGCA...TCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp ATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGGCGGAAGGCTCGCCTTaGAATTCCACAGCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: ILFSPSTIMPGICLQVSLAEGSP*NSTASL
Trigger: CAGGCTGGCTGTGGAATTCCAAGGCGAGCCTTCCGC...CAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp AATAGCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGACCATCGGGATGCACTaGGAGTCACAGGCACTGAGA +
Preference number: 4 (lower is better)
Translates to: NSSRERLDIVFPLNHYARTIGMH*ESQALR
Trigger: TCTCAGTGCCTGTGACTCCCAGTGCATCCCGATGGT...CCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGCTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp GAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGGGCCACTGCAGAATCTaGCCTTCAGCTCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: ERGLILFSPSTIMPGICLGHCRI*PSAPGS
Trigger: TGACCCTGGAGCTGAAGGCCAGATTCTGCAGTGGCC...CAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp ATAGCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAGTCCTGCTGCTTATGTaGGGCAGTCCATGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: IAPERGLILFSPSTIMPGVLLLM*GSPCCR
Trigger: CCTACAGCATGGACTGCCCCACATAAGCAGCAGGAC...TCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATAACTGTCTCTGGCGCGTaGCCGCCTCCACATACTGCC +
Preference number: 4 (lower is better)
Translates to: FPIPFPLWCKIAPERGLITVSGA*PPPHTA
Trigger: GGCAGTATGTGGAGGCGGCCACGCGCCAGAGACAGT...TATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp ATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGGGCGGGCACTCACCCTaGTCCTGCAGAGACAAAAGG +
Preference number: 4 (lower is better)
Translates to: ILFSPSTIMPGICLQVSLGGHSP*SCRDKR
Trigger: CCTTTTGTCTCTGCAGGACCAGGGTGAGTGCCCGCC...CAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp ATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGACAGGGCTGCGAGGTTaGCGGGAAAGACTGTACGCC +
Preference number: 4 (lower is better)
Translates to: ILFSPSTIMPGICLQVSLTGLRG*RERLYA
Trigger: GGCGTACAGTCTTTCCCGCCAACCTCGCAGCCCTGT...CAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGTTTTCTGTTAGGAGACCCATGCTCTaGACCTGCAGGAGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: SPSTIMPGICLQVSLFSVRRPML*TCRRKP
Trigger: TGGCTTCCTCCTGCAGGTCCAGAGCATGGGTCTCCT...AACAGAAAACAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp CCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTAGGAGACCCATGCTCTaGACCTGCAGGAGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: PERGLILFSPSTIMPGICRRPML*TCRRKP
Trigger: TGGCTTCCTCCTGCAGGTCCAGAGCATGGGTCTCCT...ACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
3UTR CAA 72 bp TTCAGTTCCACAGATAATGTCCGATGGACCTGCAAATaGCCATTGTGCTGCTGGGCAGAGAAGGAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: FSSTDNVRWTCK*PLCCWAEKEAV
Trigger: CACTGCCTCCTTCTCTGCCCAGCAGCACAATGGCAATTTGCAGGTCCATCGGACATTATCTGTGGAACTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
CDS-3UTR TCA 90 bp GCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTCAGCATCCAAGAGGGTaGACAGCAGAAACCGATTCC +
Preference number: 4 (lower is better)
Translates to: APERGLILFSPSTIMPGIQHPRG*TAETDS
Trigger: GGAATCGGTTTCTGCTGTTCACCCTCTTGGATGCTG...AATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR TCA 90 bp ATAGCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGACAGCATCCAAGAGGGTaGACAGCAGAAACCGATTCC +
Preference number: 4 (lower is better)
Translates to: IAPERGLILFSPSTIMPGQHPRG*TAETDS
Trigger: GGAATCGGTTTCTGCTGTTCACCCTCTTGGATGCTG...TCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp ATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGGCCGCCTCCACATACTaGCGATCTGACAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: ILFSPSTIMPGICLQVSLAASTY*RSDRKA
Trigger: TGCCTTCCTGTCAGATCGGCAGTATGTGGAGGCGGC...CAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp AATAGCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGCACTCACCCTGGTCCTaGAGAGACAAAAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: NSSRERLDIVFPLNHYARHSPWS*RDKRKL
Trigger: GAGCTTCCTTTTGTCTCTGCAGGACCAGGGTGAGTG...CCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGCTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp GAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGGCAGCTTCATGGCCATaGTGTCCAGCTCTTGTTCCG +
Preference number: 4 (lower is better)
Translates to: ERGLILFSPSTIMPGICLAASWP*CPALVP
Trigger: CGGAACAAGAGCTGGACAGCATGGCCATGAAGCTGC...CAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATACCCATGCTCTGGACCTaGAGGAGGAAGCCATGCAGG +
Preference number: 4 (lower is better)
Translates to: FPIPFPLWCKIAPERGLIPMLWT*RRKPCR
Trigger: CCTGCATGGCTTCCTCCTGCAGGTCCAGAGCATGGG...TATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp ATAGCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGATGTAGGTCCTTTGTCTaGGCGCTGTCCAAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: IAPERGLILFSPSTIMPGCRSFV*ALSKVE
Trigger: TTCCACCTTGGACAGCGCCCAGACAAAGGACCTACA...TCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp AATAGCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGTCAGAAAAGCTGAAATaGCCCTCAGTGCTTCGGCGG +
Preference number: 4 (lower is better)
Translates to: NSSRERLDIVFPLNHYARSEKLK*PSVLRR
Trigger: CCGCCGAAGCACTGAGGGCCATTTCAGCTTTTCTGA...CCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGCTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp ATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGGGCCACTGCAGAATCTaGCCTTCAGCTCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: ILFSPSTIMPGICLQVSLGHCRI*PSAPGS
Trigger: TGACCCTGGAGCTGAAGGCCAGATTCTGCAGTGGCC...CAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp GAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGGTCCTGCTGCTTATGTaGGGCAGTCCATGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: ERGLILFSPSTIMPGICLVLLLM*GSPCCR
Trigger: CCTACAGCATGGACTGCCCCACATAAGCAGCAGGAC...CAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCACTGTCTCTGGCGCGTaGCCGCCTCCACATACTGCC +
Preference number: 4 (lower is better)
Translates to: FYFPIPFPLWCKIAPERGTVSGA*PPPHTA
Trigger: GGCAGTATGTGGAGGCGGCCACGCGCCAGAGACAGT...GCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp CCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATATTGGGCGGGCACTCACCCTaGTCCTGCAGAGACAAAAGG +
Preference number: 4 (lower is better)
Translates to: PIPFPLWCKIAPERGLILGGHSP*SCRDKR
Trigger: CCTTTTGTCTCTGCAGGACCAGGGTGAGTGCCCGCC...CAATATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp CCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATATTGTTTGCAGACCACTGGTaGCGGGCACTCACCCTGGTC +
Preference number: 4 (lower is better)
Translates to: PIPFPLWCKIAPERGLILFADHW*RALTLV
Trigger: GACCAGGGTGAGTGCCCGCCACCAGTGGTCTGCAAA...CAATATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp CCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATATTGACAGGGCTGCGAGGTTaGCGGGAAAGACTGTACGCC +
Preference number: 4 (lower is better)
Translates to: PIPFPLWCKIAPERGLILTGLRG*RERLYA
Trigger: GGCGTACAGTCTTTCCCGCCAACCTCGCAGCCCTGT...CAATATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp CCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCATGTCTTGAAAGAGTaGCTGGGCTGGGAAGGTGCG +
Preference number: 4 (lower is better)
Translates to: PERGLILFSPSTIMPGICHVLKE*LGWEGA
Trigger: CGCACCTTCCCAGCCCAGCCACTCTTTCAAGACATG...ACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGCATGTCTTGAAAGAGTaGCTGGGCTGGGAAGGTGCG +
Preference number: 4 (lower is better)
Translates to: SRERLDIVFPLNHYARNLHVLKE*LGWEGA
Trigger: CGCACCTTCCCAGCCCAGCCACTCTTTCAAGACATG...CAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR TCA 90 bp TTATTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGACGCGGATCGTGCCGGTaGTGGGTCCTCTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LFYFPIPFPLWCKIAPERRGSCR*WVLSRS
Trigger: GCTCCTGGAGAGGACCCATCACCGGCACGATCCGCG...TCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000229119.2
CDS-3UTR TCA 90 bp CCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTTCTGGGATGTCAGCGTaGATGAAGGCAACAGCATGC +
Preference number: 4 (lower is better)
Translates to: PERGLILFSPSTIMPGICSGMSA*MKATAC
Trigger: GCATGCTGTTGCCTTCATTCACGCTGACATCCCAGA...ACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000229119.2
CDS-3UTR TCA 90 bp CCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTGGGAGTCACAGGCACTaGGAAGATACTCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: PERGLILFSPSTIMPGICGSHRH*EDTLRR
Trigger: CCTTCTCAGAGTATCTTCTCAGTGCCTGTGACTCCC...ACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR TCA 90 bp GCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTGAGCTGAGAGGAGATTaGGGCACATGTAGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: APERGLILFSPSTIMPGIELRGD*GTCSRG
Trigger: TCCTCTACTACATGTGCCTCAATCTCCTCTCAGCTC...AATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR TCA 90 bp GAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGCACATACTGCCGATCTaGCAGGAAGGCAAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: ERGLILFSPSTIMPGICLHILPI*QEGKAF
Trigger: GAAAGCCTTGCCTTCCTGTCAGATCGGCAGTATGTG...CAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR TCA 90 bp TCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGTTTTCTGTTCACATACTGCCGATCTaGCAGGAAGGCAAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: SPSTIMPGICLQVSLFSVHILPI*QEGKAF
Trigger: GAAAGCCTTGCCTTCCTGTCAGATCGGCAGTATGTG...AACAGAAAACAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR TCA 90 bp GAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGCATCCAAGAGGGTaGACAGCAGAAACCGATTCC +
Preference number: 4 (lower is better)
Translates to: ERGLILFSPSTIMPGICLQHPRG*TAETDS
Trigger: GGAATCGGTTTCTGCTGTTCACCCTCTTGGATGCTG...CAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp ATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGTCATCACCATCGGGATaGACTGGGAGTCACAGGCAC +
Preference number: 4 (lower is better)
Translates to: ILFSPSTIMPGICLQVSLSSPSG*TGSHRH
Trigger: GTGCCTGTGACTCCCAGTGCATCCCGATGGTGATGA...CAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGCACTCACCCTGGTCCTaGAGAGACAAAAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: SRERLDIVFPLNHYARNLHSPWS*RDKRKL
Trigger: GAGCTTCCTTTTGTCTCTGCAGGACCAGGGTGAGTG...CAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCCACACGGAACAGGGCTaGGAGGTTGGCGGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: FYFPIPFPLWCKIAPERGHTEQG*EVGGKD
Trigger: GTCTTTCCCGCCAACCTCGCAGCCCTGTTCCGTGTG...GCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATACCACATGTGCAGGGCTaGACTTCCCACACAGCATGC +
Preference number: 4 (lower is better)
Translates to: FPIPFPLWCKIAPERGLIPHVQG*TSHTAC
Trigger: GCATGCTGTGTGGGAAGTGCAGCCCTGCACATGTGG...TATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp CCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATATTGCAAGCAAGGCTGTGCTaGTCAGCAGGACAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PIPFPLWCKIAPERGLILQARLC*SAGQQQ
Trigger: CTGCTGCTGTCCTGCTGAGCAGCACAGCCTTGCTTG...CAATATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp CCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCATTTAGGAGACCCATaGTCTGGACCTGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: PERGLILFSPSTIMPGICHLGDP*SGPAGG
Trigger: TCCTCCTGCAGGTCCAGAGCATGGGTCTCCTAAATG...ACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGTTTTCTGTTCATTTAGGAGACCCATaGTCTGGACCTGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: SPSTIMPGICLQVSLFSVHLGDP*SGPAGG
Trigger: TCCTCCTGCAGGTCCAGAGCATGGGTCTCCTAAATG...AACAGAAAACAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGTTTTCTGTTGAGTTCTCTGGCCACTaGAGAATCTGGCCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: SPSTIMPGICLQVSLFSVEFSGH*RIWPSA
Trigger: AGCTGAAGGCCAGATTCTGCAGTGGCCAGAGAACTC...AACAGAAAACAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
CDS-3UTR CCA 90 bp TTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATAACTGCCGTTATACAGTaGGAGCTGGCCACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: FPIPFPLWCKIAPERGLITAVIQ*ELATCR
Trigger: CCTGCAGGTGGCCAGCTCCCACTGTATAACGGCAGT...TATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTATGCAGTTCCGTGTTaGTCATCTGCTGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: SRERLDIVFPLNHYARNLYAVPC*SSAGCP
Trigger: AGGGCAGCCAGCAGATGACCAACACGGAACTGCATA...CAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp GAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGCCTGATCTCCTCTaGCTGCCGAGTCAGAATTTC +
Preference number: 4 (lower is better)
Translates to: ERGLILFSPSTIMPGICLQPDLL*LPSQNF
Trigger: GAAATTCTGACTCGGCAGCCAGAGGAGATCAGGCTG...CAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGTTTTCTGTTTCAGAAAAGCTGAAATaGCCCTCAGTGCTTCGGCGG +
Preference number: 4 (lower is better)
Translates to: SPSTIMPGICLQVSLFSVSEKLK*PSVLRR
Trigger: CCGCCGAAGCACTGAGGGCCATTTCAGCTTTTCTGA...AACAGAAAACAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000186125.2
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp AATAGCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGTCCCCTTTCTCAGAGTaGCCTTCTCCGAGTTTCTAC +
Preference number: 4 (lower is better)
Translates to: NSSRERLDIVFPLNHYARSPFSE*PSPSFY
Trigger: GTAGAAACTCGGAGAAGGCCACTCTGAGAAAGGGGA...CCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGCTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp AAAGAGCTCCGCCTCAGGGACAAACCTGTCATCGTGGATGTGAGCCAGGTAGAAAACTTCACCTTCATGTaGGGAATGATGACAAAGAGG +
Preference number: 4 (lower is better)
Translates to: KELRLRDKPVIVDVSQVENFTFM*GMMTKR
Trigger: CCTCTTTGTCATCATTCCCCACATGAAGGTGAAGTT...TTCTACCTGGCTCACATCCACGATGACAGGTTTGTCCCTGAGGCGGAGCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186125.2
CDS-3UTR CCA 90 bp TCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGTTTTCTGTTGAAGGCAAGGCTTTCTaGGGTCCTGCTGCTTATGTG +
Preference number: 4 (lower is better)
Translates to: SPSTIMPGICLQVSLFSVEGKAF*GPAAYV
Trigger: CACATAAGCAGCAGGACCCCAGAAAGCCTTGCCTTC...AACAGAAAACAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp CCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTGAAGGCAAGGCTTTCTaGGGTCCTGCTGCTTATGTG +
Preference number: 4 (lower is better)
Translates to: PERGLILFSPSTIMPGICEGKAF*GPAAYV
Trigger: CACATAAGCAGCAGGACCCCAGAAAGCCTTGCCTTC...ACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGGAAGGCAAGGCTTTCTaGGGTCCTGCTGCTTATGTG +
Preference number: 4 (lower is better)
Translates to: SRERLDIVFPLNHYARNLEGKAF*GPAAYV
Trigger: CACATAAGCAGCAGGACCCCAGAAAGCCTTGCCTTC...CAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCATGCAGTACTGTCTCTaGCGCGTGGCCGCCTCCACA +
Preference number: 4 (lower is better)
Translates to: FYFPIPFPLWCKIAPERGMQYCL*RVAAST
Trigger: TGTGGAGGCGGCCACGCGCCAGAGACAGTACTGCAT...GCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTTGCAGACCACTGGTaGCGGGCACTCACCCTGGTC +
Preference number: 4 (lower is better)
Translates to: FYFPIPFPLWCKIAPERGFADHW*RALTLV
Trigger: GACCAGGGTGAGTGCCCGCCACCAGTGGTCTGCAAA...GCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp GCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTAAGCCATGCAGGGCCTaGAGTGTATCGTTTGAGAGA +
Preference number: 4 (lower is better)
Translates to: APERGLILFSPSTIMPGIKPCRA*SVSFER
Trigger: TCTCTCAAACGATACACTCCAGGCCCTGCATGGCTT...AATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp ATAGCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAAAGCCATGCAGGGCCTaGAGTGTATCGTTTGAGAGA +
Preference number: 4 (lower is better)
Translates to: IAPERGLILFSPSTIMPGKPCRA*SVSFER
Trigger: TCTCTCAAACGATACACTCCAGGCCCTGCATGGCTT...TCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATAAGGAGACCCATGCTCTaGACCTGCAGGAGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: FPIPFPLWCKIAPERGLIRRPML*TCRRKP
Trigger: TGGCTTCCTCCTGCAGGTCCAGAGCATGGGTCTCCT...TATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp ATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGCATGTCTTGAAAGAGTaGCTGGGCTGGGAAGGTGCG +
Preference number: 4 (lower is better)
Translates to: ILFSPSTIMPGICLQVSLHVLKE*LGWEGA
Trigger: CGCACCTTCCCAGCCCAGCCACTCTTTCAAGACATG...CAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR TCA 90 bp TCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGGAGCTGAGAGGAGATTaGGGCACATGTAGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: SRERLDIVFPLNHYARNLELRGD*GTCSRG
Trigger: TCCTCTACTACATGTGCCTCAATCTCCTCTCAGCTC...CAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR TCA 90 bp ATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGCACATACTGCCGATCTaGCAGGAAGGCAAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: ILFSPSTIMPGICLQVSLHILPI*QEGKAF
Trigger: GAAAGCCTTGCCTTCCTGTCAGATCGGCAGTATGTG...CAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR TCA 90 bp TTATTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGACAGCGGCAGGTTCCCTaGGGCACAGGAATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LFYFPIPFPLWCKIAPERQRQVP*GTGMGS
Trigger: GGAGCCCATTCCTGTGCCTCAGGGAACCTGCCGCTG...TCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCGGCTTTCTGGGGTCCTaGTGCTTATGTGGGGCAGTC +
Preference number: 4 (lower is better)
Translates to: FYFPIPFPLWCKIAPERGGFLGS*CLCGAV
Trigger: GACTGCCCCACATAAGCAGCAGGACCCCAGAAAGCC...GCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATAAGAAGAGGAGGAGGATaGAGTACTGTCTCTGGCGCG +
Preference number: 4 (lower is better)
Translates to: FPIPFPLWCKIAPERGLIRRGGG*STVSGA
Trigger: CGCGCCAGAGACAGTACTGCATCCTCCTCCTCTTCT...TATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp CCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATATTGAGAAGAGGAGGAGGATaGAGTACTGTCTCTGGCGCG +
Preference number: 4 (lower is better)
Translates to: PIPFPLWCKIAPERGLILRRGGG*STVSGA
Trigger: CGCGCCAGAGACAGTACTGCATCCTCCTCCTCTTCT...CAATATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGGACAAAAGGAAGCTCTaGACAGCCACAAAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: SRERLDIVFPLNHYARNLDKRKL*TATKSS
Trigger: GGAGCTCTTTGTGGCTGTGCAGAGCTTCCTTTTGTC...CAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGTTTTCTGTTGACAAAAGGAAGCTCTaGACAGCCACAAAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: SPSTIMPGICLQVSLFSVDKRKL*TATKSS
Trigger: GGAGCTCTTTGTGGCTGTGCAGAGCTTCCTTTTGTC...AACAGAAAACAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp CCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTGACAAAAGGAAGCTCTaGACAGCCACAAAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: PERGLILFSPSTIMPGICDKRKL*TATKSS
Trigger: GGAGCTCTTTGTGGCTGTGCAGAGCTTCCTTTTGTC...ACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATAGCAGCTTCATGGCCATaGTGTCCAGCTCTTGTTCCG +
Preference number: 4 (lower is better)
Translates to: FPIPFPLWCKIAPERGLIAASWP*CPALVP
Trigger: CGGAACAAGAGCTGGACAGCATGGCCATGAAGCTGC...TATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCCCACATGTGCAGGGCTaGACTTCCCACACAGCATGC +
Preference number: 4 (lower is better)
Translates to: FYFPIPFPLWCKIAPERGPHVQG*TSHTAC
Trigger: GCATGCTGTGTGGGAAGTGCAGCCCTGCACATGTGG...GCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp GAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGAAATTGCCATTGTGCTaGTGGGCAGAGAAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: ERGLILFSPSTIMPGICLKLPLC*WAEKEA
Trigger: TGCCTCCTTCTCTGCCCAGCAGCACAATGGCAATTT...CAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTGCAAATTGCCATTGTaGTGCTGGGCAGAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: SRERLDIVFPLNHYARNLCKLPL*CWAEKE
Trigger: CTCCTTCTCTGCCCAGCAGCACAATGGCAATTTGCA...CAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGTTTTCTGTTTGCAAATTGCCATTGTaGTGCTGGGCAGAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: SPSTIMPGICLQVSLFSVCKLPL*CWAEKE
Trigger: CTCCTTCTCTGCCCAGCAGCACAATGGCAATTTGCA...AACAGAAAACAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp AATAGCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGGAGGAAAAGCTTTGTTaGAAGGCTGTCCGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: NSSRERLDIVFPLNHYAREEKLC*KAVRRN
Trigger: ATTCCTGCGGACAGCCTTGCAACAAAGCTTTTCCTC...CCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGCTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp GCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTCAGCTGCTCCGGTACTaGACAAACAAGGTCATAAGT +
Preference number: 4 (lower is better)
Translates to: APERGLILFSPSTIMPGIQLLRY*TNKVIS
Trigger: ACTTATGACCTTGTTTGTGCAGTACCGGAGCAGCTG...AATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp ATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGCATTTAGGAGACCCATaGTCTGGACCTGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: ILFSPSTIMPGICLQVSLHLGDP*SGPAGG
Trigger: TCCTCCTGCAGGTCCAGAGCATGGGTCTCCTAAATG...CAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGTTTTCTGTTCTCACCAGGGCATCTTaGAAGCAGAACACCACATGT +
Preference number: 4 (lower is better)
Translates to: SPSTIMPGICLQVSLFSVLTRAS*KQNTTC
Trigger: ACATGTGGTGTTCTGCTTCCAAGATGCCCTGGTGAG...AACAGAAAACAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGTTTTCTGTTAGCACGCGTACAAAATaGATGCAGACTCTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: SPSTIMPGICLQVSLFSVSTRTK*MQTLWS
Trigger: GGACCAGAGAGTCTGCATCCATTTTGTACGCGTGCT...AACAGAAAACAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp ATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGCAGCCTGATCTCCTCTaGCTGCCGAGTCAGAATTTC +
Preference number: 4 (lower is better)
Translates to: ILFSPSTIMPGICLQVSLQPDLL*LPSQNF
Trigger: GAAATTCTGACTCGGCAGCCAGAGGAGATCAGGCTG...CAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGTTTTCTGTTTCCCCTTTCTCAGAGTaGCCTTCTCCGAGTTTCTAC +
Preference number: 4 (lower is better)
Translates to: SPSTIMPGICLQVSLFSVSPFSE*PSPSFY
Trigger: GTAGAAACTCGGAGAAGGCCACTCTGAGAAAGGGGA...AACAGAAAACAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000186125.2
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp GAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGTCCCCTTTCTCAGAGTaGCCTTCTCCGAGTTTCTAC +
Preference number: 4 (lower is better)
Translates to: ERGLILFSPSTIMPGICLSPFSE*PSPSFY
Trigger: GTAGAAACTCGGAGAAGGCCACTCTGAGAAAGGGGA...CAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCCCCTTTCTCAGAGTaGCCTTCTCCGAGTTTCTAC +
Preference number: 4 (lower is better)
Translates to: SRERLDIVFPLNHYARNLSPFSE*PSPSFY
Trigger: GTAGAAACTCGGAGAAGGCCACTCTGAGAAAGGGGA...CAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGTTTTCTGTTGATGAAGCAGCTTCATaGCCATGCTGTCCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: SPSTIMPGICLQVSLFSVDEAAS*PCCPAL
Trigger: AAGAGCTGGACAGCATGGCCATGAAGCTGCTTCATC...AACAGAAAACAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp GAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGTCTGGCTACTGGGTGTaGTCTGATGAAGACTCCAGT +
Preference number: 4 (lower is better)
Translates to: ERGLILFSPSTIMPGICLSGYWV*SDEDSS
Trigger: ACTGGAGTCTTCATCAGACCACACCCAGTAGCCAGA...CAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp GCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTCTCTTTTCTGGCTACTaGGTGTGGTCTGATGAAGAC +
Preference number: 4 (lower is better)
Translates to: APERGLILFSPSTIMPGILFSGY*VWSDED
Trigger: GTCTTCATCAGACCACACCCAGTAGCCAGAAAAGAG...AATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp ATAGCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAGTCTGGGTCATGTGTTaGTCATTTAGGAGACCCATG +
Preference number: 4 (lower is better)
Translates to: IAPERGLILFSPSTIMPGVWVMC*SFRRPM
Trigger: CATGGGTCTCCTAAATGACCAACACATGACCCAGAC...TCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR TCA 90 bp TTATTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGATGCCCTGGAGGCTCCTaGCCACTGCCTCGATCCCAT +
Preference number: 4 (lower is better)
Translates to: LFYFPIPFPLWCKIAPERCPGGS*PLPRSH
Trigger: ATGGGATCGAGGCAGTGGTCAGGAGCCTCCAGGGCA...TCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000229119.2
CDS-3UTR TCA 90 bp CCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATATTGGGGAGTCACAGGCACTaGGAAGATACTCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: PIPFPLWCKIAPERGLILGSHRH*EDTLRR
Trigger: CCTTCTCAGAGTATCTTCTCAGTGCCTGTGACTCCC...CAATATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR TCA 90 bp CCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTTCAGTATCTCAGGTCTaGGGAAGGAATTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: PERGLILFSPSTIMPGICSVSQV*GRNSLQ
Trigger: CTGGAGAGAATTCCTTCCTCAGACCTGAGATACTGA...ACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTCATCACCATCGGGATaGACTGGGAGTCACAGGCAC +
Preference number: 4 (lower is better)
Translates to: FYFPIPFPLWCKIAPERGSSPSG*TGSHRH
Trigger: GTGCCTGTGACTCCCAGTGCATCCCGATGGTGATGA...GCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp CCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATATTGCAGGATATCCACATGTaGAGGGCTGCACTTCCCACA +
Preference number: 4 (lower is better)
Translates to: PIPFPLWCKIAPERGLILQDIHM*RAALPT
Trigger: TGTGGGAAGTGCAGCCCTGCACATGTGGATATCCTG...CAATATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp CCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTAAGTTGAAGGAGGGCTaGAGGATATCCACATGTGCA +
Preference number: 4 (lower is better)
Translates to: PERGLILFSPSTIMPGICKLKEG*RISTCA
Trigger: TGCACATGTGGATATCCTGCAGCCCTCCTTCAACTT...ACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATAGATGGACCTGCAAATTaGCATTGTGCTGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: FPIPFPLWCKIAPERGLIDGPAN*HCAAGQ
Trigger: CTGCCCAGCAGCACAATGGCAATTTGCAGGTCCATC...TATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGTTTTCTGTTAATGTCCGATGGACCTaGAAATTGCCATTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SPSTIMPGICLQVSLFSVNVRWT*KLPLCC
Trigger: GCAGCACAATGGCAATTTGCAGGTCCATCGGACATT...AACAGAAAACAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp CCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTGAGGAAAAGCTTTGTTaGAAGGCTGTCCGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: PERGLILFSPSTIMPGICEEKLC*KAVRRN
Trigger: ATTCCTGCGGACAGCCTTGCAACAAAGCTTTTCCTC...ACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TTATTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGCTGGGCTGGGAAGGTaGGGGAGCAAAGGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: LFYFPIPFPLWCKIAPERAGLGR*GSKGLP
Trigger: TGGAAGGCCTTTGCTCCCGCACCTTCCCAGCCCAGC...TCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCACCATCGGGATGCACTaGGAGTCACAGGCACTGAGA +
Preference number: 4 (lower is better)
Translates to: FYFPIPFPLWCKIAPERGTIGMH*ESQALR
Trigger: TCTCAGTGCCTGTGACTCCCAGTGCATCCCGATGGT...GCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp GAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGCTCTTTTCTGGCTACTaGGTGTGGTCTGATGAAGAC +
Preference number: 4 (lower is better)
Translates to: ERGLILFSPSTIMPGICLLFSGY*VWSDED
Trigger: GTCTTCATCAGACCACACCCAGTAGCCAGAAAAGAG...CAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp CCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCAATGTCTGGGCTCCTaGCATGCAAGTAATCTAGCA +
Preference number: 4 (lower is better)
Translates to: PERGLILFSPSTIMPGICQCLGS*HASNLA
Trigger: TGCTAGATTACTTGCATGCCAGGAGCCCAGACATTG...ACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp CCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTGTCTGGGTCATGTGTTaGTCATTTAGGAGACCCATG +
Preference number: 4 (lower is better)
Translates to: PERGLILFSPSTIMPGICVWVMC*SFRRPM
Trigger: CATGGGTCTCCTAAATGACCAACACATGACCCAGAC...ACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR TCA 90 bp GAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGGTAAACCCAAGCAGTTaGTCTGTAGGTCCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: ERGLILFSPSTIMPGICLVNPSS*SVGPLS
Trigger: AGACAAAGGACCTACAGATCAACTGCTTGGGTTTAC...CAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000229119.2
CDS-3UTR TCA 90 bp TCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGGCACAGACTTGTTCATaGTCAGCGATACGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: SRERLDIVFPLNHYARNLAQTCS*SAIRRD
Trigger: ATCTCTTCGTATCGCTGATCATGAACAAGTCTGTGC...CAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000229119.2
CDS-3UTR TCA 90 bp TTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATAGAGCTGAGAGGAGATTaGGGCACATGTAGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: FPIPFPLWCKIAPERGLIELRGD*GTCSRG
Trigger: TCCTCTACTACATGTGCCTCAATCTCCTCTCAGCTC...TATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR TCA 90 bp GCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTCTTCTTTGGAAAGCTaGGAGCCTTCAATACTTGGT +
Preference number: 4 (lower is better)
Translates to: APERGLILFSPSTIMPGISSLES*EPSILG
Trigger: ACCAAGTATTGAAGGCTCTCAGCTTTCCAAAGAAGA...AATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TTATTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGCGACCAAGGAGGTGTaGCTCACCAGGGCATCTTGG +
Preference number: 4 (lower is better)
Translates to: LFYFPIPFPLWCKIAPERATKEV*LTRASW
Trigger: CCAAGATGCCCTGGTGAGGCACACCTCCTTGGTCGC...TCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp CCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTTTCAATACAGAGGTCTaGCATACTCCCATCTTCCAC +
Preference number: 4 (lower is better)
Translates to: PERGLILFSPSTIMPGICFNTEV*HTPIFH
Trigger: GTGGAAGATGGGAGTATGGCAGACCTCTGTATTGAA...ACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCCACTCACCCTGGTCCTaGAGAGACAAAAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: FYFPIPFPLWCKIAPERGHSPWS*RDKRKL
Trigger: GAGCTTCCTTTTGTCTCTGCAGGACCAGGGTGAGTG...GCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCCAGGATATCCACATGTaGAGGGCTGCACTTCCCACA +
Preference number: 4 (lower is better)
Translates to: FYFPIPFPLWCKIAPERGQDIHM*RAALPT
Trigger: TGTGGGAAGTGCAGCCCTGCACATGTGGATATCCTG...GCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATAAAATTGCCATTGTGCTaGTGGGCAGAGAAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: FPIPFPLWCKIAPERGLIKLPLC*WAEKEA
Trigger: TGCCTCCTTCTCTGCCCAGCAGCACAATGGCAATTT...TATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp CCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATATTGAAATTGCCATTGTGCTaGTGGGCAGAGAAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: PIPFPLWCKIAPERGLILKLPLC*WAEKEA
Trigger: TGCCTCCTTCTCTGCCCAGCAGCACAATGGCAATTT...CAATATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCGATGGACCTGCAAATTaGCATTGTGCTGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: FYFPIPFPLWCKIAPERGDGPAN*HCAAGQ
Trigger: CTGCCCAGCAGCACAATGGCAATTTGCAGGTCCATC...GCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp ATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGCAGCTGCTCCGGTACTaGACAAACAAGGTCATAAGT +
Preference number: 4 (lower is better)
Translates to: ILFSPSTIMPGICLQVSLQLLRY*TNKVIS
Trigger: ACTTATGACCTTGTTTGTGCAGTACCGGAGCAGCTG...CAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp CCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTACCAAAGCTGCACCTTaGAAAATAAGACCCACCTCT +
Preference number: 4 (lower is better)
Translates to: PERGLILFSPSTIMPGICTKAAP*KIRPTS
Trigger: AGAGGTGGGTCTTATTTTGCAAGGTGCAGCTTTGGT...ACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp CCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCCTTCCAAAGATGATTaGAAGGTCTGGGTCATGTGT +
Preference number: 4 (lower is better)
Translates to: PERGLILFSPSTIMPGICPSKDD*KVWVMC
Trigger: ACACATGACCCAGACCTTGCAATCATCTTTGGAAGG...ACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGTTTTCTGTTCCTTCCAAAGATGATTaGAAGGTCTGGGTCATGTGT +
Preference number: 4 (lower is better)
Translates to: SPSTIMPGICLQVSLFSVPSKDD*KVWVMC
Trigger: ACACATGACCCAGACCTTGCAATCATCTTTGGAAGG...AACAGAAAACAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGTTTTCTGTTTCATTAGGCAACGGATaGTCTGTTCCATATTCGGCT +
Preference number: 4 (lower is better)
Translates to: SPSTIMPGICLQVSLFSVSLGNG*SVPYSA
Trigger: AGCCGAATATGGAACAGACCATCCGTTGCCTAATGA...AACAGAAAACAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TTATTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGACCAGGCTGCCTCCCATaGAGCGCAGGTTACACAGCT +
Preference number: 4 (lower is better)
Translates to: LFYFPIPFPLWCKIAPERPGCLP*SAGYTA
Trigger: AGCTGTGTAACCTGCGCTCCATGGGAGGCAGCCTGG...TCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp GAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGCTCAAAGAGGAACTCTaGGATGTCAGCGTGAATGAA +
Preference number: 4 (lower is better)
Translates to: ERGLILFSPSTIMPGICLLKEEL*DVSVNE
Trigger: TTCATTCACGCTGACATCCCAGAGTTCCTCTTTGAG...CAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCCAGCCTGATCTCCTCTaGCTGCCGAGTCAGAATTTC +
Preference number: 4 (lower is better)
Translates to: FYFPIPFPLWCKIAPERGQPDLL*LPSQNF
Trigger: GAAATTCTGACTCGGCAGCCAGAGGAGATCAGGCTG...GCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp GAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGGCAGAGAGTTCTTCTTaGGAAAGTGGTTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: ERGLILFSPSTIMPGICLAESSS*ESGSVF
Trigger: GAAGACAGAACCACTTTCCCAAGAAGAACTCTCTGC...CAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGTTTTCTGTTGCAGAGAGTTCTTCTTaGGAAAGTGGTTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: SPSTIMPGICLQVSLFSVAESSS*ESGSVF
Trigger: GAAGACAGAACCACTTTCCCAAGAAGAACTCTCTGC...AACAGAAAACAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TTATTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAATGCAGTACTGTCTCTaGCGCGTGGCCGCCTCCACA +
Preference number: 4 (lower is better)
Translates to: LFYFPIPFPLWCKIAPERMQYCL*RVAAST
Trigger: TGTGGAGGCGGCCACGCGCCAGAGACAGTACTGCAT...TCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATATCTGGCTACTGGGTGTaGTCTGATGAAGACTCCAGT +
Preference number: 4 (lower is better)
Translates to: FPIPFPLWCKIAPERGLISGYWV*SDEDSS
Trigger: ACTGGAGTCTTCATCAGACCACACCCAGTAGCCAGA...TATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp AATAGCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGGATGATTGCAAGGTCTaGGTCATGTGTTGGTCATTT +
Preference number: 4 (lower is better)
Translates to: NSSRERLDIVFPLNHYARDDCKV*VMCWSF
Trigger: AAATGACCAACACATGACCCAGACCTTGCAATCATC...CCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGCTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR TCA 90 bp CCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATATTGGAGTCAGAATTTCTTTaGAGAGCAGCAGTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: PIPFPLWCKIAPERGLILESEFL*RAAVPE
Trigger: CTCAGGGACTGCTGCTCTTCAAAGAAATTCTGACTC...CAATATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR TCA 90 bp TTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATAGAGTCAGAATTTCTTTaGAGAGCAGCAGTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: FPIPFPLWCKIAPERGLIESEFL*RAAVPE
Trigger: CTCAGGGACTGCTGCTCTTCAAAGAAATTCTGACTC...TATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR TCA 90 bp GAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGTCTTCTTTGGAAAGCTaGGAGCCTTCAATACTTGGT +
Preference number: 4 (lower is better)
Translates to: ERGLILFSPSTIMPGICLSSLES*EPSILG
Trigger: ACCAAGTATTGAAGGCTCTCAGCTTTCCAAAGAAGA...CAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR TCA 90 bp CCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATATTGTCAGTATCTCAGGTCTaGGGAAGGAATTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: PIPFPLWCKIAPERGLILSVSQV*GRNSLQ
Trigger: CTGGAGAGAATTCCTTCCTCAGACCTGAGATACTGA...CAATATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TTATTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGATACATGGAGGCTTTaGAGACCACTGGTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: LFYFPIPFPLWCKIAPERDTWRL*RPLVAG
Trigger: GCCCGCCACCAGTGGTCTGCAAAGCCTCCATGTATC...TCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TTATTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGACAAGCAAGGCTGTGCTaGTCAGCAGGACAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LFYFPIPFPLWCKIAPERQARLC*SAGQQQ
Trigger: CTGCTGCTGTCCTGCTGAGCAGCACAGCCTTGCTTG...TCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTGCAAATTGCCATTGTaGTGCTGGGCAGAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: FYFPIPFPLWCKIAPERGCKLPL*CWAEKE
Trigger: CTCCTTCTCTGCCCAGCAGCACAATGGCAATTTGCA...GCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp CCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATATTGAATGTCCGATGGACCTaGAAATTGCCATTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: PIPFPLWCKIAPERGLILNVRWT*KLPLCC
Trigger: GCAGCACAATGGCAATTTGCAGGTCCATCGGACATT...CAATATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp ATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGACCAAAGCTGCACCTTaGAAAATAAGACCCACCTCT +
Preference number: 4 (lower is better)
Translates to: ILFSPSTIMPGICLQVSLTKAAP*KIRPTS
Trigger: AGAGGTGGGTCTTATTTTGCAAGGTGCAGCTTTGGT...CAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGTTTTCTGTTAACTTCACCTTCATGTaGGGAATGATGACAAAGAGG +
Preference number: 4 (lower is better)
Translates to: SPSTIMPGICLQVSLFSVNFTFM*GMMTKR
Trigger: CCTCTTTGTCATCATTCCCCACATGAAGGTGAAGTT...AACAGAAAACAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000186125.2
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TTATTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCCACTGCAGAATCTaGCCTTCAGCTCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: LFYFPIPFPLWCKIAPERGHCRI*PSAPGS
Trigger: TGACCCTGGAGCTGAAGGCCAGATTCTGCAGTGGCC...TCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCGATGAAGCAGCTTCATaGCCATGCTGTCCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: FYFPIPFPLWCKIAPERGDEAAS*PCCPAL
Trigger: AAGAGCTGGACAGCATGGCCATGAAGCTGCTTCATC...GCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATACTCTTTTCTGGCTACTaGGTGTGGTCTGATGAAGAC +
Preference number: 4 (lower is better)
Translates to: FPIPFPLWCKIAPERGLILFSGY*VWSDED
Trigger: GTCTTCATCAGACCACACCCAGTAGCCAGAAAAGAG...TATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp CCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATATTGCAATGTCTGGGCTCCTaGCATGCAAGTAATCTAGCA +
Preference number: 4 (lower is better)
Translates to: PIPFPLWCKIAPERGLILQCLGS*HASNLA
Trigger: TGCTAGATTACTTGCATGCCAGGAGCCCAGACATTG...CAATATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCAAGCCATGCAGGGCCTaGAGTGTATCGTTTGAGAGA +
Preference number: 4 (lower is better)
Translates to: FYFPIPFPLWCKIAPERGKPCRA*SVSFER
Trigger: TCTCTCAAACGATACACTCCAGGCCCTGCATGGCTT...GCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATAGTCTGGGTCATGTGTTaGTCATTTAGGAGACCCATG +
Preference number: 4 (lower is better)
Translates to: FPIPFPLWCKIAPERGLIVWVMC*SFRRPM
Trigger: CATGGGTCTCCTAAATGACCAACACATGACCCAGAC...TATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp CCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTGATGATTGCAAGGTCTaGGTCATGTGTTGGTCATTT +
Preference number: 4 (lower is better)
Translates to: PERGLILFSPSTIMPGICDDCKV*VMCWSF
Trigger: AAATGACCAACACATGACCCAGACCTTGCAATCATC...ACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGGATGATTGCAAGGTCTaGGTCATGTGTTGGTCATTT +
Preference number: 4 (lower is better)
Translates to: SRERLDIVFPLNHYARNLDDCKV*VMCWSF
Trigger: AAATGACCAACACATGACCCAGACCTTGCAATCATC...CAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR TCA 90 bp CCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATATTGCACTGTGTGACACTTTaGAAAGAAGAGCGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: PIPFPLWCKIAPERGLILHCVTL*KEERFF
Trigger: GAAGAACCGCTCTTCTTTTCAAAGTGTCACACAGTG...CAATATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000229119.2
CDS-3UTR TCA 90 bp TTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCGAGTCAGAATTTCTTTaGAGAGCAGCAGTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: FYFPIPFPLWCKIAPERGESEFL*RAAVPE
Trigger: CTCAGGGACTGCTGCTCTTCAAAGAAATTCTGACTC...GCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TTATTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGATCATCACCATCGGGATaGACTGGGAGTCACAGGCAC +
Preference number: 4 (lower is better)
Translates to: LFYFPIPFPLWCKIAPERSSPSG*TGSHRH
Trigger: GTGCCTGTGACTCCCAGTGCATCCCGATGGTGATGA...TCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCAAGTTGAAGGAGGGCTaGAGGATATCCACATGTGCA +
Preference number: 4 (lower is better)
Translates to: FYFPIPFPLWCKIAPERGKLKEG*RISTCA
Trigger: TGCACATGTGGATATCCTGCAGCCCTCCTTCAACTT...GCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATAACCAAAGCTGCACCTTaGAAAATAAGACCCACCTCT +
Preference number: 4 (lower is better)
Translates to: FPIPFPLWCKIAPERGLITKAAP*KIRPTS
Trigger: AGAGGTGGGTCTTATTTTGCAAGGTGCAGCTTTGGT...TATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TTATTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAACCATCGGGATGCACTaGGAGTCACAGGCACTGAGA +
Preference number: 4 (lower is better)
Translates to: LFYFPIPFPLWCKIAPERTIGMH*ESQALR
Trigger: TCTCAGTGCCTGTGACTCCCAGTGCATCCCGATGGT...TCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp ATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGAACTTCACCTTCATGTaGGGAATGATGACAAAGAGG +
Preference number: 4 (lower is better)
Translates to: ILFSPSTIMPGICLQVSLNFTFM*GMMTKR
Trigger: CCTCTTTGTCATCATTCCCCACATGAAGGTGAAGTT...CAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp ATAGCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAAGAGCCTTCAATACTTaGTTCAGTTCCACAGATAAT +
Preference number: 4 (lower is better)
Translates to: IAPERGLILFSPSTIMPGRAFNT*FSSTDN
Trigger: ATTATCTGTGGAACTGAACCAAGTATTGAAGGCTCT...TCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCCCTTCCAAAGATGATTaGAAGGTCTGGGTCATGTGT +
Preference number: 4 (lower is better)
Translates to: FYFPIPFPLWCKIAPERGPSKDD*KVWVMC
Trigger: ACACATGACCCAGACCTTGCAATCATCTTTGGAAGG...GCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCGCAGAGAGTTCTTCTTaGGAAAGTGGTTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: FYFPIPFPLWCKIAPERGAESSS*ESGSVF
Trigger: GAAGACAGAACCACTTTCCCAAGAAGAACTCTCTGC...GCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGTTTTCTGTTAGAGCCTTCAATACTTaGTTCAGTTCCACAGATAAT +
Preference number: 4 (lower is better)
Translates to: SPSTIMPGICLQVSLFSVRAFNT*FSSTDN
Trigger: ATTATCTGTGGAACTGAACCAAGTATTGAAGGCTCT...AACAGAAAACAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TTATTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGACTGGAGGACGAAAGATaGTCAAAGAGGAACTCTGGG +
Preference number: 4 (lower is better)
Translates to: LFYFPIPFPLWCKIAPERLEDER*SKRNSG
Trigger: CCCAGAGTTCCTCTTTGAGCATCTTTCGTCCTCCAG...TCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCAACTTCACCTTCATGTaGGGAATGATGACAAAGAGG +
Preference number: 4 (lower is better)
Translates to: FYFPIPFPLWCKIAPERGNFTFM*GMMTKR
Trigger: CCTCTTTGTCATCATTCCCCACATGAAGGTGAAGTT...GCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TTATTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGATGAAGCAGCTTCATaGCCATGCTGTCCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: LFYFPIPFPLWCKIAPERDEAAS*PCCPAL
Trigger: AAGAGCTGGACAGCATGGCCATGAAGCTGCTTCATC...TCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TTATTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGATCTGGCTACTGGGTGTaGTCTGATGAAGACTCCAGT +
Preference number: 4 (lower is better)
Translates to: LFYFPIPFPLWCKIAPERSGYWV*SDEDSS
Trigger: ACTGGAGTCTTCATCAGACCACACCCAGTAGCCAGA...TCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp ATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGAGAGCCTTCAATACTTaGTTCAGTTCCACAGATAAT +
Preference number: 4 (lower is better)
Translates to: ILFSPSTIMPGICLQVSLRAFNT*FSSTDN
Trigger: ATTATCTGTGGAACTGAACCAAGTATTGAAGGCTCT...CAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TTATTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGAGGAAAAGCTTTGTTaGAAGGCTGTCCGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: LFYFPIPFPLWCKIAPEREEKLC*KAVRRN
Trigger: ATTCCTGCGGACAGCCTTGCAACAAAGCTTTTCCTC...TCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR GCA 90 bp TTATTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGACAGCTGCTCCGGTACTaGACAAACAAGGTCATAAGT +
Preference number: 4 (lower is better)
Translates to: LFYFPIPFPLWCKIAPERQLLRY*TNKVIS
Trigger: ACTTATGACCTTGTTTGTGCAGTACCGGAGCAGCTG...TCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CCA 90 bp TTATTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGATTACACAGCTCTCTGTaGCACTCATTCATTAGGCAA +
Preference number: 4 (lower is better)
Translates to: LFYFPIPFPLWCKIAPERLHSSL*HSFIRQ
Trigger: TTGCCTAATGAATGAGTGCCACAGAGAGCTGTGTAA...TCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000229119.2
CDS GCA 90 bp CCAGCGACACTCCGGGCTCCGGCAGCAGTTCCAACGCGCAGGCCATaGAGACGTGAGGGGACACGGGCAGCAGCCAGCGCGGATCGTGCC +
Preference number: 5 (lower is better)
Translates to: PATLRAPAAVPTRRP*RREGTRAAASADRA
Trigger: GGCACGATCCGCGCTGGCTGCTGCCCGTGTCCCCTCACGTCTGCATGGCCTGCGCGTTGGAACTGCTGCCGGAGCCCGGAGTGTCGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS GCA 90 bp GCTTCTTCATCTCTCCCAAACGCGGGATGGTCAGCAGCCGTCATCTaGCCCGCAGCCACCTCCTCGCCTCCCCGGCTCTGCAGCGCAGGT +
Preference number: 5 (lower is better)
Translates to: ASSSLPNAGWSAAVI*PAATSSPPRLCSAG
Trigger: ACCTGCGCTGCAGAGCCGGGGAGGCGAGGAGGTGGCTGCGGGGCAGATGACGGCTGCTGACCATCCCGCGTTTGGGAGAGATGAAGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000229119.2
CDS CCA 90 bp AGTGCTTCGGCGGCCACAGCTAACACAGGGCTGCTCACGGCCTCCTaGAGGGCACGGCTGGCATCTCTGCACAGGGCTGAGCTTGTGAAC +
Preference number: 5 (lower is better)
Translates to: SASAATANTGLLTAS*RARLASLHRAELVN
Trigger: GTTCACAAGCTCAGCCCTGTGCAGAGATGCCAGCCGTGCCCTCCAGGAGGCCGTGAGCAGCCCTGTGTTAGCTGTGGCCGCCGAAGCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000089178.11
ENSMUST00000186125.2
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS CCA 90 bp GACAGGAGGTTCAGCAGCAGCGGCAGGTTCCCTGAGGCACAGGAATaGGCTCCTGAGGTGGACGCTCCATACTCCACCAGGAGGCGCTGC +
Preference number: 5 (lower is better)
Translates to: DRRFSSSGRFPEAQE*APEVDAPYSTRRRC
Trigger: GCAGCGCCTCCTGGTGGAGTATGGAGCGTCCACCTCAGGAGCCCATTCCTGTGCCTCAGGGAACCTGCCGCTGCTGCTGAACCTCCTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000229119.2
CDS CCA 90 bp CCGCCAAACCAGGAATGGTGTCCACCAGCTTGCCCAGGAGAGTCGTaGTGGCCAGGCTGCCTCCCATGGAGCGCAGGTTACACAGCTCTC +
Preference number: 5 (lower is better)
Translates to: PPNQEWCPPACPGES*WPGCLPWSAGYTAL
Trigger: GAGAGCTGTGTAACCTGCGCTCCATGGGAGGCAGCCTGGCCACCACGACTCTCCTGGGCAAGCTGGTGGACACCATTCCTGGTTTGGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS TCA 90 bp GCTCACGGCCTCCTGGAGGGCACGGCTGGCATCTCTGCACAGGGCTaGGCTTGTGAACAGCCTGATCTCCTCTGGCTGCCGAGTCAGAAT +
Preference number: 5 (lower is better)
Translates to: AHGLLEGTAGISAQG*ACEQPDLLWLPSQN
Trigger: ATTCTGACTCGGCAGCCAGAGGAGATCAGGCTGTTCACAAGCTCAGCCCTGTGCAGAGATGCCAGCCGTGCCCTCCAGGAGGCCGTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000089178.11
ENSMUST00000186125.2
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS GCA 90 bp GAATGGTGTCCACCAGCTTGCCCAGGAGAGTCGTGGTGGCCAGGCTaGCTCCCATGGAGCGCAGGTTACACAGCTCTCTGTGGCACTCAT +
Preference number: 5 (lower is better)
Translates to: EWCPPACPGESWWPG*LPWSAGYTALCGTH
Trigger: ATGAGTGCCACAGAGAGCTGTGTAACCTGCGCTCCATGGGAGGCAGCCTGGCCACCACGACTCTCCTGGGCAAGCTGGTGGACACCATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS CCA 90 bp CCAAACCAGGAATGGTGTCCACCAGCTTGCCCAGGAGAGTCGTGGTaGCCAGGCTGCCTCCCATGGAGCGCAGGTTACACAGCTCTCTGT +
Preference number: 5 (lower is better)
Translates to: PNQEWCPPACPGESW*PGCLPWSAGYTALC
Trigger: ACAGAGAGCTGTGTAACCTGCGCTCCATGGGAGGCAGCCTGGCCACCACGACTCTCCTGGGCAAGCTGGTGGACACCATTCCTGGTTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS CCA 90 bp TCAAGTTGCCGTGCTCCATTACAAGCTCGTCCGCCAAACCAGGAATaGTGTCCACCAGCTTGCCCAGGAGAGTCGTGGTGGCCAGGCTGC +
Preference number: 5 (lower is better)
Translates to: SSCRAPLQARPPNQE*CPPACPGESWWPGC
Trigger: GCAGCCTGGCCACCACGACTCTCCTGGGCAAGCTGGTGGACACCATTCCTGGTTTGGCGGACGAGCTTGTAATGGAGCACGGCAACTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS CCA 90 bp AAGGTGTCTTCCTTCTCTGCACTGGGAGCTGTGAAGGGGTTCTCCTaGGCGGAAGGCTCGCCTTGGAATTCCACAGCCAGCCTGCAGGCA +
Preference number: 5 (lower is better)
Translates to: KVSSFSALGAVKGFS*AEGSPWNSTASLQA
Trigger: TGCCTGCAGGCTGGCTGTGGAATTCCAAGGCGAGCCTTCCGCCCAGGAGAACCCCTTCACAGCTCCCAGTGCAGAGAAGGAAGACACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000089178.11
ENSMUST00000186125.2
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS CCA 90 bp GCACTGGGAGCTGTGAAGGGGTTCTCCTGGGCGGAAGGCTCGCCTTaGAATTCCACAGCCAGCCTGCAGGCATTTCTAAAGCCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: ALGAVKGFSWAEGSP*NSTASLQAFLKPSR
Trigger: TCTGGAAGGCTTTAGAAATGCCTGCAGGCTGGCTGTGGAATTCCAAGGCGAGCCTTCCGCCCAGGAGAACCCCTTCACAGCTCCCAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000089178.11
ENSMUST00000186125.2
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS CCA 90 bp CACACAGCTTCTCCCGGAAATGGCCGGAAAGCATCTCAGCGGCCGTaGGCGAGGAGTAGAGCTTCCCATAGAGGTAACAGATGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: HTASPGNGRKASQRP*ARSRASHRGNRWKP
Trigger: AGGCTTCCATCTGTTACCTCTATGGGAAGCTCTACTCCTCGCCCACGGCCGCTGAGATGCTTTCCGGCCATTTCCGGGAGAAGCTGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS CCA 90 bp ACAGCATGCTTCGCCGGGGAATGGACCAGCACTGCCGTTATACAGTaGGAGCTGGCCACCTGCAGGATCTCATCTCTGGACAGGAGAAAC +
Preference number: 5 (lower is better)
Translates to: TACFAGEWTSTAVIQ*ELATCRISSLDRRN
Trigger: GTTTCTCCTGTCCAGAGATGAGATCCTGCAGGTGGCCAGCTCCCACTGTATAACGGCAGTGCTGGTCCATTCCCCGGCGAAGCATGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS CCA 90 bp GGATGCGTGGCCTCCTCCGAGTACCTCATCACCATCGGGATGCACTaGGAGTCACAGGCACTGAGAAGATACTCTGAGAAGGCCTCCAAG +
Preference number: 5 (lower is better)
Translates to: GCVASSEYLITIGMH*ESQALRRYSEKASK
Trigger: CTTGGAGGCCTTCTCAGAGTATCTTCTCAGTGCCTGTGACTCCCAGTGCATCCCGATGGTGATGAGGTACTCGGAGGAGGCCACGCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000089178.11
ENSMUST00000186125.2
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS GCA 90 bp TTCATGGCCATGCTGTCCAGCTCTTGTTCCGACTCATTCCTCATCTaGACCAAGGACAGGAGGTTCAGCAGCAGCGGCAGGTTCCCTGAG +
Preference number: 5 (lower is better)
Translates to: FMAMLSSSCSDSFLI*TKDRRFSSSGRFPE
Trigger: CTCAGGGAACCTGCCGCTGCTGCTGAACCTCCTGTCCTTGGTGCAGATGAGGAATGAGTCGGAACAAGAGCTGGACAGCATGGCCATGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000229119.2
CDS TCA 90 bp TCCTCTGGCTGCCGAGTCAGAATTTCTTTGAAGAGCAGCAGTCCCTaGGTATGCAGTTCCGTGTTGGTCATCTGCTGGCTGCCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: SSGCRVRISLKSSSP*VCSSVLVICWLPWR
Trigger: CCTCCAGGGCAGCCAGCAGATGACCAACACGGAACTGCATACTCAGGGACTGCTGCTCTTCAAAGAAATTCTGACTCGGCAGCCAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS GCA 90 bp CCACATACTGCCGATCTGACAGGAAGGCAAGGCTTTCTGGGGTCCTaGTGCTTATGTGGGGCAGTCCATGCTGTAGGAACTCAGACACTG +
Preference number: 5 (lower is better)
Translates to: PHTADLTGRQGFLGS*CLCGAVHAVGTQTL
Trigger: CAGTGTCTGAGTTCCTACAGCATGGACTGCCCCACATAAGCAGCAGGACCCCAGAAAGCCTTGCCTTCCTGTCAGATCGGCAGTATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000089178.11
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS CCA 90 bp TCCTGTTCAGAGGGGTCTGGGAAAACTCCATACATCGGCTCAGCATaGCTTCAAGCAAGGCACGAAGTGCTCTGTACTGCACGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: SCSEGSGKTPYIGSA*LQARHEVLCTARAE
Trigger: CTCTGCCCGTGCAGTACAGAGCACTTCGTGCCTTGCTTGAAGCCATGCTGAGCCGATGTATGGAGTTTTCCCAGACCCCTCTGAACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000089178.11
ENSMUST00000186125.2
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS CCA 90 bp TTTCTACTGCAAGCGTGGCCCAGGGACCTCCTGTTCAGAGGGGTCTaGGAAAACTCCATACATCGGCTCAGCATGGCTTCAAGCAAGGCA +
Preference number: 5 (lower is better)
Translates to: FLLQAWPRDLLFRGV*ENSIHRLSMASSKA
Trigger: TGCCTTGCTTGAAGCCATGCTGAGCCGATGTATGGAGTTTTCCCAGACCCCTCTGAACAGGAGGTCCCTGGGCCACGCTTGCAGTAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000089178.11
ENSMUST00000186125.2
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CAA 90 bp AATAGCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGGCCAGTGCACTGTCCTaGTCCCCGCACACTGCCAGC +
Preference number: 5 (lower is better)
Translates to: NSSRERLDIVFPLNHYARASALS*SPHTAS
Trigger: GCTGGCAGTGTGCGGGGACAAGGACAGTGCACTGGC...CCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGCTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CAA 90 bp GCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTGCCAGTGCACTGTCCTaGTCCCCGCACACTGCCAGC +
Preference number: 5 (lower is better)
Translates to: APERGLILFSPSTIMPGIASALS*SPHTAS
Trigger: GCTGGCAGTGTGCGGGGACAAGGACAGTGCACTGGC...AATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS TCA 90 bp AGCTGGCCACCTGCAGGATCTCATCTCTGGACAGGAGAAACTTTTTaGGCACCAAAGGTAGTGAGGTCTCTCTCGATGGCCGCTCGACAC +
Preference number: 5 (lower is better)
Translates to: SWPPAGSHLWTGETF*APKVVRSLSMAARH
Trigger: GTGTCGAGCGGCCATCGAGAGAGACCTCACTACCTTTGGTGCTCAAAAAGTTTCTCCTGTCCAGAGATGAGATCCTGCAGGTGGCCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS TCA 90 bp TCAAGCAAGGCACGAAGTGCTCTGTACTGCACGGGCAGAGAGCTCTaGTGGTCCTTCCTCAGAAAAGCTGAAATGGCCCTCAGTGCTTCG +
Preference number: 5 (lower is better)
Translates to: SSKARSALYCTGREL*WSFLRKAEMALSAS
Trigger: CGAAGCACTGAGGGCCATTTCAGCTTTTCTGAGGAAGGACCATCAGAGCTCTCTGCCCGTGCAGTACAGAGCACTTCGTGCCTTGCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000089178.11
ENSMUST00000186125.2
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS TCA 90 bp CCGAGTACCTCATCACCATCGGGATGCACTGGGAGTCACAGGCACTaGGAAGATACTCTGAGAAGGCCTCCAAGGTGTCTTCCTTCTCTG +
Preference number: 5 (lower is better)
Translates to: PSTSSPSGCTGSHRH*EDTLRRPPRCLPSL
Trigger: CAGAGAAGGAAGACACCTTGGAGGCCTTCTCAGAGTATCTTCTCAGTGCCTGTGACTCCCAGTGCATCCCGATGGTGATGAGGTACTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000089178.11
ENSMUST00000186125.2
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS GCA 90 bp AAACTCCATACATCGGCTCAGCATGGCTTCAAGCAAGGCACGAAGTaGTCTGTACTGCACGGGCAGAGAGCTCTGATGGTCCTTCCTCAG +
Preference number: 5 (lower is better)
Translates to: KLHTSAQHGFKQGTK*SVLHGQRALMVLPQ
Trigger: CTGAGGAAGGACCATCAGAGCTCTCTGCCCGTGCAGTACAGAGCACTTCGTGCCTTGCTTGAAGCCATGCTGAGCCGATGTATGGAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000089178.11
ENSMUST00000186125.2
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS GCA 90 bp GGGGAATGGACCAGCACTGCCGTTATACAGTGGGAGCTGGCCACCTaGAGGATCTCATCTCTGGACAGGAGAAACTTTTTGAGCACCAAA +
Preference number: 5 (lower is better)
Translates to: GEWTSTAVIQWELAT*RISSLDRRNFLSTK
Trigger: TTTGGTGCTCAAAAAGTTTCTCCTGTCCAGAGATGAGATCCTGCAGGTGGCCAGCTCCCACTGTATAACGGCAGTGCTGGTCCATTCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS-3UTR CAA 90 bp AATAGCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGCAGCGTCCTCAGGAGTaGACAGCGGTTGATCCCCTG +
Preference number: 5 (lower is better)
Translates to: NSSRERLDIVFPLNHYARQRPQE*TAVDPL
Trigger: CAGGGGATCAACCGCTGTCAACTCCTGAGGACGCTG...CCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGCTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CAA 90 bp ATAGCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGACAGCGTCCTCAGGAGTaGACAGCGGTTGATCCCCTG +
Preference number: 5 (lower is better)
Translates to: IAPERGLILFSPSTIMPGQRPQE*TAVDPL
Trigger: CAGGGGATCAACCGCTGTCAACTCCTGAGGACGCTG...TCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS GCA 90 bp AAGGCAAGGCTTTCTGGGGTCCTGCTGCTTATGTGGGGCAGTCCATaGTGTAGGAACTCAGACACTGCAGAGAGTTCTTCTTGGGAAAGT +
Preference number: 5 (lower is better)
Translates to: KARLSGVLLLMWGSP*CRNSDTAESSSWES
Trigger: ACTTTCCCAAGAAGAACTCTCTGCAGTGTCTGAGTTCCTACAGCATGGACTGCCCCACATAAGCAGCAGGACCCCAGAAAGCCTTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000089178.11
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CAA 90 bp GCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTGTATGCAGTTCCGTGTaGGTCATCTGCTGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: APERGLILFSPSTIMPGIVCSSV*VICWLP
Trigger: GGGCAGCCAGCAGATGACCAACACGGAACTGCATAC...AATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000229119.2
CDS CCA 90 bp AGAGCTTCCCATAGAGGTAACAGATGGAAGCCTGTACCCCCTCATTaGGGTAAACCAAGCCCCTCAACAGATGTTCCATCAAGTTGCCGT +
Preference number: 5 (lower is better)
Translates to: RASHRGNRWKPVPPH*GKPSPSTDVPSSCR
Trigger: ACGGCAACTTGATGGAACATCTGTTGAGGGGCTTGGTTTACCCCAATGAGGGGGTACAGGCTTCCATCTGTTACCTCTATGGGAAGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS CCA 90 bp CCAAGAGTATCAGGCAGTTGTAGCTGGACCAGACAAGGATTTCGCTaGAGGACGAAAGATGCTCAAAGAGGAACTCTGGGATGTCAGCGT +
Preference number: 5 (lower is better)
Translates to: PRVSGSCSWTRQGFR*RTKDAQRGTLGCQR
Trigger: ACGCTGACATCCCAGAGTTCCTCTTTGAGCATCTTTCGTCCTCCAGCGAAATCCTTGTCTGGTCCAGCTACAACTGCCTGATACTCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS-3UTR CAA 90 bp TTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCGCCAGTGCACTGTCCTaGTCCCCGCACACTGCCAGC +
Preference number: 5 (lower is better)
Translates to: FYFPIPFPLWCKIAPERGASALS*SPHTAS
Trigger: GCTGGCAGTGTGCGGGGACAAGGACAGTGCACTGGC...GCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CAA 90 bp GCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTCGATGGACCTGCAAATaGCCATTGTGCTGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: APERGLILFSPSTIMPGIRWTCK*PLCCWA
Trigger: TGCCCAGCAGCACAATGGCAATTTGCAGGTCCATCG...AATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CAA 90 bp AATAGCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGGGCAGAGGAAAAGCTTaGTTGCAAGGCTGTCCGCAG +
Preference number: 5 (lower is better)
Translates to: NSSRERLDIVFPLNHYARGRGKA*LQGCPQ
Trigger: CTGCGGACAGCCTTGCAACAAAGCTTTTCCTCTGCC...CCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGCTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CAA 90 bp ATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGCAGCGTCCTCAGGAGTaGACAGCGGTTGATCCCCTG +
Preference number: 5 (lower is better)
Translates to: ILFSPSTIMPGICLQVSLQRPQE*TAVDPL
Trigger: CAGGGGATCAACCGCTGTCAACTCCTGAGGACGCTG...CAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CAA 90 bp CCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTGAGGCAGAGCATGTCTaGAAAGAGTGGCTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: PERGLILFSPSTIMPGICEAEHV*KEWLGW
Trigger: CCAGCCCAGCCACTCTTTCAAGACATGCTCTGCCTC...ACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS TCA 90 bp CGAAGAGATCGTACTTCAGTAGCTGCCTTAGTAAACCCAAGCAGTTaGTCTGTAGGTCCTTTGTCTGGGCGCTGTCCAAGGTGGAAAGGA +
Preference number: 5 (lower is better)
Translates to: RRDRTSVAALVNPSS*SVGPLSGRCPRWKG
Trigger: TCCTTTCCACCTTGGACAGCGCCCAGACAAAGGACCTACAGATCAACTGCTTGGGTTTACTAAGGCAGCTACTGAAGTACGATCTCTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS TCA 90 bp GAGGCTCCTGACCACTGCCTCGATCCCATACACTGTGTGACACTTTaGAAAGAAGAGCGGTTCTTCTGCCAAGAGTATCAGGCAGTTGTA +
Preference number: 5 (lower is better)
Translates to: EAPDHCLDPIHCVTL*KEERFFCQEYQAVV
Trigger: TACAACTGCCTGATACTCTTGGCAGAAGAACCGCTCTTCTTTTCAAAGTGTCACACAGTGTATGGGATCGAGGCAGTGGTCAGGAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS TCA 90 bp TCTGGCCACTGCAGAATCTGGCCTTCAGCTCCAGGGTCAGTCGTATaGATGATGAATCAGCAAGCTTCCTGGAGAACTTCACCTTCATGT +
Preference number: 5 (lower is better)
Translates to: SGHCRIWPSAPGSVV*MMNQQASWRTSPSC
Trigger: ACATGAAGGTGAAGTTCTCCAGGAAGCTTGCTGATTCATCATTCATACGACTGACCCTGGAGCTGAAGGCCAGATTCTGCAGTGGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000089178.11
ENSMUST00000186125.2
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CAA 90 bp CCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATATTGATGGTGTCCACCAGCTaGCCCAGGAGAGTCGTGGTG +
Preference number: 5 (lower is better)
Translates to: PIPFPLWCKIAPERGLILMVSTS*PRRVVV
Trigger: CACCACGACTCTCCTGGGCAAGCTGGTGGACACCAT...CAATATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000229119.2
CDS-3UTR CAA 90 bp GCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTATGAGGCCACCCACCTaGACATCCTCATTCTCCCAA +
Preference number: 5 (lower is better)
Translates to: APERGLILFSPSTIMPGIMRPPT*TSSFSQ
Trigger: TTGGGAGAATGAGGATGTCAAGGTGGGTGGCCTCAT...AATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CAA 90 bp GCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTACCTGCAAATTGCCATaGTGCTGCTGGGCAGAGAAG +
Preference number: 5 (lower is better)
Translates to: APERGLILFSPSTIMPGITCKLP*CCWAEK
Trigger: CTTCTCTGCCCAGCAGCACAATGGCAATTTGCAGGT...AATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CAA 90 bp AATAGCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGACCTGCAAATTGCCATaGTGCTGCTGGGCAGAGAAG +
Preference number: 5 (lower is better)
Translates to: NSSRERLDIVFPLNHYARTCKLP*CCWAEK
Trigger: CTTCTCTGCCCAGCAGCACAATGGCAATTTGCAGGT...CCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGCTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CAA 90 bp ATAGCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAACCTGCAAATTGCCATaGTGCTGCTGGGCAGAGAAG +
Preference number: 5 (lower is better)
Translates to: IAPERGLILFSPSTIMPGTCKLP*CCWAEK
Trigger: CTTCTCTGCCCAGCAGCACAATGGCAATTTGCAGGT...TCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CAA 90 bp GAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGCGATGGACCTGCAAATaGCCATTGTGCTGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: ERGLILFSPSTIMPGICLRWTCK*PLCCWA
Trigger: TGCCCAGCAGCACAATGGCAATTTGCAGGTCCATCG...CAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CAA 90 bp TCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGGGCAGAGGAAAAGCTTaGTTGCAAGGCTGTCCGCAG +
Preference number: 5 (lower is better)
Translates to: SRERLDIVFPLNHYARNLGRGKA*LQGCPQ
Trigger: CTGCGGACAGCCTTGCAACAAAGCTTTTCCTCTGCC...CAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS TCA 90 bp CTTCTTGGGAAAGTGGTTCTGTCTTCTCTGGAGCTGAGAGGAGATTaGGGCACATGTAGTAGAGGAAACTGGAGCACACCTGATTTAGGG +
Preference number: 5 (lower is better)
Translates to: LLGKVVLSSLELRGD*GTCSRGNWSTPDLG
Trigger: CCCTAAATCAGGTGTGCTCCAGTTTCCTCTACTACATGTGCCTCAATCTCCTCTCAGCTCCAGAGAAGACAGAACCACTTTCCCAAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000089178.11
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS TCA 90 bp TGCAGAGAGTTCTTCTTGGGAAAGTGGTTCTGTCTTCTCTGGAGCTaGGAGGAGATTGAGGCACATGTAGTAGAGGAAACTGGAGCACAC +
Preference number: 5 (lower is better)
Translates to: CREFFLGKWFCLLWS*EEIEAHVVEETGAH
Trigger: GTGTGCTCCAGTTTCCTCTACTACATGTGCCTCAATCTCCTCTCAGCTCCAGAGAAGACAGAACCACTTTCCCAAGAAGAACTCTCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000089178.11
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CAA 90 bp ATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGCCTCACCAGGGCATCTaGGAAGCAGAACACCACATG +
Preference number: 5 (lower is better)
Translates to: ILFSPSTIMPGICLQVSLPHQGI*EAEHHM
Trigger: CATGTGGTGTTCTGCTTCCAAGATGCCCTGGTGAGG...CAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000229119.2
CDS-3UTR CAA 90 bp CCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTATGAGGCCACCCACCTaGACATCCTCATTCTCCCAA +
Preference number: 5 (lower is better)
Translates to: PERGLILFSPSTIMPGICMRPPT*TSSFSQ
Trigger: TTGGGAGAATGAGGATGTCAAGGTGGGTGGCCTCAT...ACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CAA 90 bp GCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTCATGCTGTCCAGCTCTaGTTCCGACTCATTCCTCAT +
Preference number: 5 (lower is better)
Translates to: APERGLILFSPSTIMPGIHAVQL*FRLIPH
Trigger: ATGAGGAATGAGTCGGAACAAGAGCTGGACAGCATG...AATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CAA 90 bp AATAGCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGACACAGCATGCTCACTaGATGAAGCAGCTTCATGGC +
Preference number: 5 (lower is better)
Translates to: NSSRERLDIVFPLNHYARTQHAH*MKQLHG
Trigger: GCCATGAAGCTGCTTCATCAAGTGAGCATGCTGTGT...CCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGCTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CAA 90 bp ATAGCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAACACAGCATGCTCACTaGATGAAGCAGCTTCATGGC +
Preference number: 5 (lower is better)
Translates to: IAPERGLILFSPSTIMPGTQHAH*MKQLHG
Trigger: GCCATGAAGCTGCTTCATCAAGTGAGCATGCTGTGT...TCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CAA 90 bp AATAGCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAGAGGAAAAGCTTTGTaGCAAGGCTGTCCGCAGGAA +
Preference number: 5 (lower is better)
Translates to: NSSRERLDIVFPLNHYARRGKAL*QGCPQE
Trigger: TTCCTGCGGACAGCCTTGCAACAAAGCTTTTCCTCT...CCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGCTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS TCA 90 bp TGGCACTCATTCATTAGGCAACGGATGGTCTGTTCCATATTCGGCTaGGTAGTGAGCTGGACAAGGACTTCAATACAGAGGTCTGCCATA +
Preference number: 5 (lower is better)
Translates to: WHSFIRQRMVCSIFG*VVSWTRTSIQRSAI
Trigger: TATGGCAGACCTCTGTATTGAAGTCCTTGTCCAGCTCACTACTCAGCCGAATATGGAACAGACCATCCGTTGCCTAATGAATGAGTGCCA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS CCA 90 bp AAAAGAAGAGCGGTTCTTCTGCCAAGAGTATCAGGCAGTTGTAGCTaGACCAGACAAGGATTTCGCTGGAGGACGAAAGATGCTCAAAGA +
Preference number: 5 (lower is better)
Translates to: KRRAVLLPRVSGSCS*TRQGFRWRTKDAQR
Trigger: TCTTTGAGCATCTTTCGTCCTCCAGCGAAATCCTTGTCTGGTCCAGCTACAACTGCCTGATACTCTTGGCAGAAGAACCGCTCTTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS-3UTR CAA 90 bp CCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTACACAGCATGCTCACTaGATGAAGCAGCTTCATGGC +
Preference number: 5 (lower is better)
Translates to: PERGLILFSPSTIMPGICTQHAH*MKQLHG
Trigger: GCCATGAAGCTGCTTCATCAAGTGAGCATGCTGTGT...ACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CAA 90 bp TCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGTTTTCTGTTAGAGGAAAAGCTTTGTaGCAAGGCTGTCCGCAGGAA +
Preference number: 5 (lower is better)
Translates to: SPSTIMPGICLQVSLFSVRGKAL*QGCPQE
Trigger: TTCCTGCGGACAGCCTTGCAACAAAGCTTTTCCTCT...AACAGAAAACAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CAA 90 bp AATAGCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGGACAGGAGAAACTTTTaGAGCACCAAAGGTAGTGAG +
Preference number: 5 (lower is better)
Translates to: NSSRERLDIVFPLNHYARDRRNF*STKGSE
Trigger: CTCACTACCTTTGGTGCTCAAAAAGTTTCTCCTGTC...CCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGCTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000229119.2
CDS-3UTR CAA 90 bp ATAGCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGATGCAGAGAGTTCTTCTaGGGAAAGTGGTTCTGTCTT +
Preference number: 5 (lower is better)
Translates to: IAPERGLILFSPSTIMPGCREFF*GKWFCL
Trigger: AAGACAGAACCACTTTCCCAAGAAGAACTCTCTGCA...TCCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CAA 90 bp AATAGCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGTGCAGAGAGTTCTTCTaGGGAAAGTGGTTCTGTCTT +
Preference number: 5 (lower is better)
Translates to: NSSRERLDIVFPLNHYARCREFF*GKWFCL
Trigger: AAGACAGAACCACTTTCCCAAGAAGAACTCTCTGCA...CCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGCTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CAA 90 bp TTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATAATGAGGCCACCCACCTaGACATCCTCATTCTCCCAA +
Preference number: 5 (lower is better)
Translates to: FPIPFPLWCKIAPERGLIMRPPT*TSSFSQ
Trigger: TTGGGAGAATGAGGATGTCAAGGTGGGTGGCCTCAT...TATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CAA 90 bp ATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGCATGCTGTCCAGCTCTaGTTCCGACTCATTCCTCAT +
Preference number: 5 (lower is better)
Translates to: ILFSPSTIMPGICLQVSLHAVQL*FRLIPH
Trigger: ATGAGGAATGAGTCGGAACAAGAGCTGGACAGCATG...CAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CAA 90 bp TCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGTTTTCTGTTAGTAAACCCAAGCAGTaGATCTGTAGGTCCTTTGTC +
Preference number: 5 (lower is better)
Translates to: SPSTIMPGICLQVSLFSVSKPKQ*ICRSFV
Trigger: GACAAAGGACCTACAGATCAACTGCTTGGGTTTACT...AACAGAAAACAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000229119.2
CDS-3UTR CAA 90 bp AATAGCTCCAGAGAGAGGCTTGATATTGTTTTCCCCCTCAACCATTATGCCCGGACACTGTGTGACACTTaGAAAAGAAGAGCGGTTCTT +
Preference number: 5 (lower is better)
Translates to: NSSRERLDIVFPLNHYARTLCDT*KRRAVL
Trigger: AAGAACCGCTCTTCTTTTCAAAGTGTCACACAGTGT...CCGGGCATAATGGTTGAGGGGGAAAACAATATCAAGCCTCTCTCTGGAGCTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000229119.2
CDS-3UTR CAA 90 bp CCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATATTGCATGCTGTCCAGCTCTaGTTCCGACTCATTCCTCAT +
Preference number: 5 (lower is better)
Translates to: PIPFPLWCKIAPERGLILHAVQL*FRLIPH
Trigger: ATGAGGAATGAGTCGGAACAAGAGCTGGACAGCATG...CAATATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CAA 90 bp TTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATAAGAGGAAAAGCTTTGTaGCAAGGCTGTCCGCAGGAA +
Preference number: 5 (lower is better)
Translates to: FPIPFPLWCKIAPERGLIRGKAL*QGCPQE
Trigger: TTCCTGCGGACAGCCTTGCAACAAAGCTTTTCCTCT...TATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CAA 90 bp ATATTGTTTTCCCCCTCAACCATTATGCCCGGAATTTGTCTGCAGGTCTCATTGAACCAAAGCTGCACCTaGCAAAATAAGACCCACCTC +
Preference number: 5 (lower is better)
Translates to: ILFSPSTIMPGICLQVSLNQSCT*QNKTHL
Trigger: GAGGTGGGTCTTATTTTGCAAGGTGCAGCTTTGGTT...CAATGAGACCTGCAGACAAATTCCGGGCATAATGGTTGAGGGGGAAAACAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS CCA 90 bp ATGAATGATGAATCAGCAAGCTTCCTGGAGAACTTCACCTTCATGTaGGGAATGATGACAAAGAGGCTGTGTAGAATGGAGAGGAAAACC +
Preference number: 5 (lower is better)
Translates to: MNDESASFLENFTFM*GMMTKRLCRMERKT
Trigger: GGTTTTCCTCTCCATTCTACACAGCCTCTTTGTCATCATTCCCCACATGAAGGTGAAGTTCTCCAGGAAGCTTGCTGATTCATCATTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000089178.11
ENSMUST00000186125.2
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CAA 90 bp TTATTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGAGGCAGAGCATGTCTaGAAAGAGTGGCTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: LFYFPIPFPLWCKIAPEREAEHV*KEWLGW
Trigger: CCAGCCCAGCCACTCTTTCAAGACATGCTCTGCCTC...TCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CAA 90 bp CCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCTTGATATTGTGCAGAGAGTTCTTCTaGGGAAAGTGGTTCTGTCTT +
Preference number: 5 (lower is better)
Translates to: PIPFPLWCKIAPERGLILCREFF*GKWFCL
Trigger: AAGACAGAACCACTTTCCCAAGAAGAACTCTCTGCA...CAATATCAAGCCTCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS-3UTR CAA 90 bp TTATTTTATTTCCCAATTCCATTTCCACTGTGGTGTAAAATAGCTCCAGAGAGAGGCAGAGGAAAAGCTTaGTTGCAAGGCTGTCCGCAG +
Preference number: 5 (lower is better)
Translates to: LFYFPIPFPLWCKIAPERGRGKA*LQGCPQ
Trigger: CTGCGGACAGCCTTGCAACAAAGCTTTTCCTCTGCC...TCTCTCTGGAGCTATTTTACACCACAGTGGAAATGGAATTGGGAAATAAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS TCA 72 bp GGGGACACGGGCAGCAGCCAGCGCGGATCGTGCCGGTaGTGGGTCCTCTCCAGGAGCAGCGCCGCTTCTTCA +
Preference number: 6 (lower is better)
Translates to: GDTGSSQRGSCR*WVLSRSSAASS
Trigger: TGAAGAAGCGGCGCTGCTCCTGGAGAGGACCCATCACCGGCACGATCCGCGCTGGCTGCTGCCCGTGTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS TCA 72 bp TCCGGCAGCAGTTCCAACGCGCAGGCCATGCAGACGTaGGGGGACACGGGCAGCAGCCAGCGCGGATCGTGC +
Preference number: 6 (lower is better)
Translates to: SGSSSNAQAMQT*GDTGSSQRGSC
Trigger: GCACGATCCGCGCTGGCTGCTGCCCGTGTCCCCTCACGTCTGCATGGCCTGCGCGTTGGAACTGCTGCCGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS GCA 72 bp TCTCTCCCAAACGCGGGATGGTCAGCAGCCGTCATCTaGCCCGCAGCCACCTCCTCGCCTCCCCGGCTCTGC +
Preference number: 6 (lower is better)
Translates to: SLPNAGWSAAVI*PAATSSPPRLC
Trigger: GCAGAGCCGGGGAGGCGAGGAGGTGGCTGCGGGGCAGATGACGGCTGCTGACCATCCCGCGTTTGGGAGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000229119.2
CDS TCA 72 bp CTCCTGGAGGGCACGGCTGGCATCTCTGCACAGGGCTaGGCTTGTGAACAGCCTGATCTCCTCTGGCTGCCG +
Preference number: 6 (lower is better)
Translates to: LLEGTAGISAQG*ACEQPDLLWLP
Trigger: CGGCAGCCAGAGGAGATCAGGCTGTTCACAAGCTCAGCCCTGTGCAGAGATGCCAGCCGTGCCCTCCAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000089178.11
ENSMUST00000186125.2
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS GCA 72 bp CCACCAGCTTGCCCAGGAGAGTCGTGGTGGCCAGGCTaGCTCCCATGGAGCGCAGGTTACACAGCTCTCTGT +
Preference number: 6 (lower is better)
Translates to: PPACPGESWWPG*LPWSAGYTALC
Trigger: ACAGAGAGCTGTGTAACCTGCGCTCCATGGGAGGCAGCCTGGCCACCACGACTCTCCTGGGCAAGCTGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS CCA 72 bp CAGGAATGGTGTCCACCAGCTTGCCCAGGAGAGTCGTaGTGGCCAGGCTGCCTCCCATGGAGCGCAGGTTAC +
Preference number: 6 (lower is better)
Translates to: QEWCPPACPGES*WPGCLPWSAGY
Trigger: GTAACCTGCGCTCCATGGGAGGCAGCCTGGCCACCACGACTCTCCTGGGCAAGCTGGTGGACACCATTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS CCA 72 bp GAATGGTGTCCACCAGCTTGCCCAGGAGAGTCGTGGTaGCCAGGCTGCCTCCCATGGAGCGCAGGTTACACA +
Preference number: 6 (lower is better)
Translates to: EWCPPACPGESW*PGCLPWSAGYT
Trigger: TGTGTAACCTGCGCTCCATGGGAGGCAGCCTGGCCACCACGACTCTCCTGGGCAAGCTGGTGGACACCATTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS CCA 72 bp GTGGAAAGGAAGAGGGCACACAGCTTCTCCCGGAAATaGCCGGAAAGCATCTCAGCGGCCGTGGGCGAGGAG +
Preference number: 6 (lower is better)
Translates to: VERKRAHSFSRK*PESISAAVGEE
Trigger: CTCCTCGCCCACGGCCGCTGAGATGCTTTCCGGCCATTTCCGGGAGAAGCTGTGTGCCCTCTTCCTTTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS GCA 72 bp CCAGGGCATCTTGGAAGCAGAACACCACATGTTTCTTaGGCACCAGCGACACTCCGGGCTCCGGCAGCAGTT +
Preference number: 6 (lower is better)
Translates to: PGHLGSRTPHVS*APATLRAPAAV
Trigger: AACTGCTGCCGGAGCCCGGAGTGTCGCTGGTGCGCAAGAAACATGTGGTGTTCTGCTTCCAAGATGCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS CCA 72 bp CGTGCTCCATTACAAGCTCGTCCGCCAAACCAGGAATaGTGTCCACCAGCTTGCCCAGGAGAGTCGTGGTGG +
Preference number: 6 (lower is better)
Translates to: RAPLQARPPNQE*CPPACPGESWW
Trigger: CCACCACGACTCTCCTGGGCAAGCTGGTGGACACCATTCCTGGTTTGGCGGACGAGCTTGTAATGGAGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS CAA 72 bp ACCAGGGCATCTTGGAAGCAGAACACCACATGTTTCTaGCGCACCAGCGACACTCCGGGCTCCGGCAGCAGT +
Preference number: 6 (lower is better)
Translates to: TRASWKQNTTCF*RTSDTPGSGSS
Trigger: ACTGCTGCCGGAGCCCGGAGTGTCGCTGGTGCGCAAGAAACATGTGGTGTTCTGCTTCCAAGATGCCCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS CAA 90 bp TGCACTGGGAGCTGTGAAGGGGTTCTCCTGGGCGGAAGGCTCGCCTaGGAATTCCACAGCCAGCCTGCAGGCATTTCTAAAGCCTTCCAG +
Preference number: 6 (lower is better)
Translates to: CTGSCEGVLLGGRLA*EFHSQPAGISKAFQ
Trigger: CTGGAAGGCTTTAGAAATGCCTGCAGGCTGGCTGTGGAATTCCAAGGCGAGCCTTCCGCCCAGGAGAACCCCTTCACAGCTCCCAGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000089178.11
ENSMUST00000186125.2
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS CAA 90 bp AGCTACCAGCTGAGCGACCAAGGAGGTGTGCCTCACCAGGGCATCTaGGAAGCAGAACACCACATGTTTCTTGCGCACCAGCGACACTCC +
Preference number: 6 (lower is better)
Translates to: SYQLSDQGGVPHQGI*EAEHHMFLAHQRHS
Trigger: GGAGTGTCGCTGGTGCGCAAGAAACATGTGGTGTTCTGCTTCCAAGATGCCCTGGTGAGGCACACCTCCTTGGTCGCTCAGCTGGTAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS CCA 72 bp TCTCCCGGAAATGGCCGGAAAGCATCTCAGCGGCCGTaGGCGAGGAGTAGAGCTTCCCATAGAGGTAACAGA +
Preference number: 6 (lower is better)
Translates to: SPGNGRKASQRP*ARSRASHRGNR
Trigger: TCTGTTACCTCTATGGGAAGCTCTACTCCTCGCCCACGGCCGCTGAGATGCTTTCCGGCCATTTCCGGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS CCA 72 bp CAAGCGTGGCCCAGGGACCTCCTGTTCAGAGGGGTCTaGGAAAACTCCATACATCGGCTCAGCATGGCTTCA +
Preference number: 6 (lower is better)
Translates to: QAWPRDLLFRGV*ENSIHRLSMAS
Trigger: TGAAGCCATGCTGAGCCGATGTATGGAGTTTTCCCAGACCCCTCTGAACAGGAGGTCCCTGGGCCACGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000089178.11
ENSMUST00000186125.2
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS GCA 72 bp ACATCGGCTCAGCATGGCTTCAAGCAAGGCACGAAGTaGTCTGTACTGCACGGGCAGAGAGCTCTGATGGTC +
Preference number: 6 (lower is better)
Translates to: TSAQHGFKQGTK*SVLHGQRALMV
Trigger: GACCATCAGAGCTCTCTGCCCGTGCAGTACAGAGCACTTCGTGCCTTGCTTGAAGCCATGCTGAGCCGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000089178.11
ENSMUST00000186125.2
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS GCA 72 bp GCCGATCTGACAGGAAGGCAAGGCTTTCTGGGGTCCTaGTGCTTATGTGGGGCAGTCCATGCTGTAGGAACT +
Preference number: 6 (lower is better)
Translates to: ADLTGRQGFLGS*CLCGAVHAVGT
Trigger: AGTTCCTACAGCATGGACTGCCCCACATAAGCAGCAGGACCCCAGAAAGCCTTGCCTTCCTGTCAGATCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000089178.11
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS CAA 72 bp CTGAGCGACCAAGGAGGTGTGCCTCACCAGGGCATCTaGGAAGCAGAACACCACATGTTTCTTGCGCACCAG +
Preference number: 6 (lower is better)
Translates to: LSDQGGVPHQGI*EAEHHMFLAHQ
Trigger: CTGGTGCGCAAGAAACATGTGGTGTTCTGCTTCCAAGATGCCCTGGTGAGGCACACCTCCTTGGTCGCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS CAA 72 bp AGCTGTGAAGGGGTTCTCCTGGGCGGAAGGCTCGCCTaGGAATTCCACAGCCAGCCTGCAGGCATTTCTAAA +
Preference number: 6 (lower is better)
Translates to: SCEGVLLGGRLA*EFHSQPAGISK
Trigger: TTTAGAAATGCCTGCAGGCTGGCTGTGGAATTCCAAGGCGAGCCTTCCGCCCAGGAGAACCCCTTCACAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000089178.11
ENSMUST00000186125.2
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS TCA 72 bp GCACGAAGTGCTCTGTACTGCACGGGCAGAGAGCTCTaGTGGTCCTTCCTCAGAAAAGCTGAAATGGCCCTC +
Preference number: 6 (lower is better)
Translates to: ARSALYCTGREL*WSFLRKAEMAL
Trigger: GAGGGCCATTTCAGCTTTTCTGAGGAAGGACCATCAGAGCTCTCTGCCCGTGCAGTACAGAGCACTTCGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000089178.11
ENSMUST00000186125.2
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS GCA 72 bp AGCACACCTGATTTAGGGACGAGTGACTCTGGCCACTaGAGAATCTGGCCTTCAGCTCCAGGGTCAGTCGTA +
Preference number: 6 (lower is better)
Translates to: STPDLGTSDSGH*RIWPSAPGSVV
Trigger: TACGACTGACCCTGGAGCTGAAGGCCAGATTCTGCAGTGGCCAGAGTCACTCGTCCCTAAATCAGGTGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000089178.11
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS CCA 72 bp GCCTCCTCCGAGTACCTCATCACCATCGGGATGCACTaGGAGTCACAGGCACTGAGAAGATACTCTGAGAAG +
Preference number: 6 (lower is better)
Translates to: ASSEYLITIGMH*ESQALRRYSEK
Trigger: CTTCTCAGAGTATCTTCTCAGTGCCTGTGACTCCCAGTGCATCCCGATGGTGATGAGGTACTCGGAGGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000089178.11
ENSMUST00000186125.2
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS CCA 72 bp GAATGGAGAGGAAAACCTCCATCAGCTTTGGATGCGTaGCCTCCTCCGAGTACCTCATCACCATCGGGATGC +
Preference number: 6 (lower is better)
Translates to: EWRGKPPSALDA*PPPSTSSPSGC
Trigger: GCATCCCGATGGTGATGAGGTACTCGGAGGAGGCCACGCATCCAAAGCTGATGGAGGTTTTCCTCTCCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000089178.11
ENSMUST00000186125.2
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS TCA 72 bp GATGCTCAAAGAGGAACTCTGGGATGTCAGCGTGAATaGAGGCAACAGCATGCTTCGCCGGGGAATGGACCA +
Preference number: 6 (lower is better)
Translates to: DAQRGTLGCQRE*RQQHASPGNGP
Trigger: TGGTCCATTCCCCGGCGAAGCATGCTGTTGCCTTCATTCACGCTGACATCCCAGAGTTCCTCTTTGAGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS CCA 72 bp TGGGCGAGGAGTAGAGCTTCCCATAGAGGTAACAGATaGAAGCCTGTACCCCCTCATTGGGGTAAACCAAGC +
Preference number: 6 (lower is better)
Translates to: WARSRASHRGNR*KPVPPHWGKPS
Trigger: GCTTGGTTTACCCCAATGAGGGGGTACAGGCTTCCATCTGTTACCTCTATGGGAAGCTCTACTCCTCGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS CCA 72 bp GAGGGGTCTGGGAAAACTCCATACATCGGCTCAGCATaGCTTCAAGCAAGGCACGAAGTGCTCTGTACTGCA +
Preference number: 6 (lower is better)
Translates to: EGSGKTPYIGSA*LQARHEVLCTA
Trigger: TGCAGTACAGAGCACTTCGTGCCTTGCTTGAAGCCATGCTGAGCCGATGTATGGAGTTTTCCCAGACCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000089178.11
ENSMUST00000186125.2
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS CAA 90 bp CTCGATGGCCGCTCGACACTCTCAGCACCTTCTACCGGCACAGACTaGTTCATGATCAGCGATACGAAGAGATCGTACTTCAGTAGCTGC +
Preference number: 6 (lower is better)
Translates to: LDGRSTLSAPSTGTD*FMISDTKRSYFSSC
Trigger: GCAGCTACTGAAGTACGATCTCTTCGTATCGCTGATCATGAACAAGTCTGTGCCGGTAGAAGGTGCTGAGAGTGTCGAGCGGCCATCGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS TCA 72 bp GAAAGATGCTCAAAGAGGAACTCTGGGATGTCAGCGTaGATGAAGGCAACAGCATGCTTCGCCGGGGAATGG +
Preference number: 6 (lower is better)
Translates to: ERCSKRNSGMSA*MKATACFAGEW
Trigger: CCATTCCCCGGCGAAGCATGCTGTTGCCTTCATTCACGCTGACATCCCAGAGTTCCTCTTTGAGCATCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS TCA 72 bp TCATCACCATCGGGATGCACTGGGAGTCACAGGCACTaGGAAGATACTCTGAGAAGGCCTCCAAGGTGTCTT +
Preference number: 6 (lower is better)
Translates to: SSPSGCTGSHRH*EDTLRRPPRCL
Trigger: AAGACACCTTGGAGGCCTTCTCAGAGTATCTTCTCAGTGCCTGTGACTCCCAGTGCATCCCGATGGTGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000089178.11
ENSMUST00000186125.2
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS GCA 72 bp ACCAGCACTGCCGTTATACAGTGGGAGCTGGCCACCTaGAGGATCTCATCTCTGGACAGGAGAAACTTTTTG +
Preference number: 6 (lower is better)
Translates to: TSTAVIQWELAT*RISSLDRRNFL
Trigger: CAAAAAGTTTCTCCTGTCCAGAGATGAGATCCTGCAGGTGGCCAGCTCCCACTGTATAACGGCAGTGCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS GCA 72 bp CTTTCTGGGGTCCTGCTGCTTATGTGGGGCAGTCCATaGTGTAGGAACTCAGACACTGCAGAGAGTTCTTCT +
Preference number: 6 (lower is better)
Translates to: LSGVLLLMWGSP*CRNSDTAESSS
Trigger: AGAAGAACTCTCTGCAGTGTCTGAGTTCCTACAGCATGGACTGCCCCACATAAGCAGCAGGACCCCAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000089178.11
ENSMUST00000188048.7
ENSMUST00000189540.7
ENSMUST00000229119.2
CDS CCA 72 bp AGTAAACCCAAGCAGTTGATCTGTAGGTCCTTTGTCTaGGCGCTGTCCAAGGTGGAAAGGAAGAGGGCACAC +
Preference number: 6 (lower is better)
Translates to: SKPKQLICRSFV*ALSKVERKRAH
Trigger: GTGTGCCCTCTTCCTTTCCACCTTGGACAGCGCCCAGACAAAGGACCTACAGATCAACTGCTTGGGTTTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS TCA 72 bp CGTACTTCAGTAGCTGCCTTAGTAAACCCAAGCAGTTaGTCTGTAGGTCCTTTGTCTGGGCGCTGTCCAAGG +
Preference number: 6 (lower is better)
Translates to: RTSVAALVNPSS*SVGPLSGRCPR
Trigger: CCTTGGACAGCGCCCAGACAAAGGACCTACAGATCAACTGCTTGGGTTTACTAAGGCAGCTACTGAAGTACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS TCA 72 bp AGGCTCCTGACCACTGCCTCGATCCCATACACTGTGTaGCACTTTGAAAAGAAGAGCGGTTCTTCTGCCAAG +
Preference number: 6 (lower is better)
Translates to: RLLTTASIPYTV*HFEKKSGSSAK
Trigger: CTTGGCAGAAGAACCGCTCTTCTTTTCAAAGTGTCACACAGTGTATGGGATCGAGGCAGTGGTCAGGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS TCA 72 bp TGCCGAGTCAGAATTTCTTTGAAGAGCAGCAGTCCCTaGGTATGCAGTTCCGTGTTGGTCATCTGCTGGCTG +
Preference number: 6 (lower is better)
Translates to: CRVRISLKSSSP*VCSSVLVICWL
Trigger: CAGCCAGCAGATGACCAACACGGAACTGCATACTCAGGGACTGCTGCTCTTCAAAGAAATTCTGACTCGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS CCA 72 bp TCAGGCAGTTGTAGCTGGACCAGACAAGGATTTCGCTaGAGGACGAAAGATGCTCAAAGAGGAACTCTGGGA +
Preference number: 6 (lower is better)
Translates to: SGSCSWTRQGFR*RTKDAQRGTLG
Trigger: TCCCAGAGTTCCTCTTTGAGCATCTTTCGTCCTCCAGCGAAATCCTTGTCTGGTCCAGCTACAACTGCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS CAA 72 bp CGCTCGACACTCTCAGCACCTTCTACCGGCACAGACTaGTTCATGATCAGCGATACGAAGAGATCGTACTTC +
Preference number: 6 (lower is better)
Translates to: RSTLSAPSTGTD*FMISDTKRSYF
Trigger: GAAGTACGATCTCTTCGTATCGCTGATCATGAACAAGTCTGTGCCGGTAGAAGGTGCTGAGAGTGTCGAGCG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS CAA 90 bp ACGAAGAGATCGTACTTCAGTAGCTGCCTTAGTAAACCCAAGCAGTaGATCTGTAGGTCCTTTGTCTGGGCGCTGTCCAAGGTGGAAAGG +
Preference number: 6 (lower is better)
Translates to: TKRSYFSSCLSKPKQ*ICRSFVWALSKVER
Trigger: CCTTTCCACCTTGGACAGCGCCCAGACAAAGGACCTACAGATCAACTGCTTGGGTTTACTAAGGCAGCTACTGAAGTACGATCTCTTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS GCA 72 bp TGTTTAACAGTCCGAAAAGCACGCGTACAAAATGGATaGAGACTCTCTGGTCCTGAGCTACCAGCTGAGCGA +
Preference number: 6 (lower is better)
Translates to: CLTVRKARVQNG*RLSGPELPAER
Trigger: TCGCTCAGCTGGTAGCTCAGGACCAGAGAGTCTGCATCCATTTTGTACGCGTGCTTTTCGGACTGTTAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS CCA 72 bp CATAGAGGTAACAGATGGAAGCCTGTACCCCCTCATTaGGGTAAACCAAGCCCCTCAACAGATGTTCCATCA +
Preference number: 6 (lower is better)
Translates to: HRGNRWKPVPPH*GKPSPSTDVPS
Trigger: TGATGGAACATCTGTTGAGGGGCTTGGTTTACCCCAATGAGGGGGTACAGGCTTCCATCTGTTACCTCTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS CAA 72 bp TCGTACTTCAGTAGCTGCCTTAGTAAACCCAAGCAGTaGATCTGTAGGTCCTTTGTCTGGGCGCTGTCCAAG +
Preference number: 6 (lower is better)
Translates to: SYFSSCLSKPKQ*ICRSFVWALSK
Trigger: CTTGGACAGCGCCCAGACAAAGGACCTACAGATCAACTGCTTGGGTTTACTAAGGCAGCTACTGAAGTACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS CAA 72 bp ACCTGCAGGATCTCATCTCTGGACAGGAGAAACTTTTaGAGCACCAAAGGTAGTGAGGTCTCTCTCGATGGC +
Preference number: 6 (lower is better)
Translates to: TCRISSLDRRNF*STKGSEVSLDG
Trigger: GCCATCGAGAGAGACCTCACTACCTTTGGTGCTCAAAAAGTTTCTCCTGTCCAGAGATGAGATCCTGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS TCA 72 bp CACTCTCAGCACCTTCTACCGGCACAGACTTGTTCATaGTCAGCGATACGAAGAGATCGTACTTCAGTAGCT +
Preference number: 6 (lower is better)
Translates to: HSQHLLPAQTCS*SAIRRDRTSVA
Trigger: AGCTACTGAAGTACGATCTCTTCGTATCGCTGATCATGAACAAGTCTGTGCCGGTAGAAGGTGCTGAGAGTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS TCA 72 bp GACCACTGCCTCGATCCCATACACTGTGTGACACTTTaGAAAGAAGAGCGGTTCTTCTGCCAAGAGTATCAG +
Preference number: 6 (lower is better)
Translates to: DHCLDPIHCVTL*KEERFFCQEYQ
Trigger: CTGATACTCTTGGCAGAAGAACCGCTCTTCTTTTCAAAGTGTCACACAGTGTATGGGATCGAGGCAGTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS TCA 72 bp TTCATTAGGCAACGGATGGTCTGTTCCATATTCGGCTaGGTAGTGAGCTGGACAAGGACTTCAATACAGAGG +
Preference number: 6 (lower is better)
Translates to: FIRQRMVCSIFG*VVSWTRTSIQR
Trigger: CCTCTGTATTGAAGTCCTTGTCCAGCTCACTACTCAGCCGAATATGGAACAGACCATCCGTTGCCTAATGAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2
CDS GCA 72 bp ATGATCAGCGATACGAAGAGATCGTACTTCAGTAGCTaGCTTAGTAAACCCAAGCAGTTGATCTGTAGGTCC +
Preference number: 6 (lower is better)
Translates to: MISDTKRSYFSS*LSKPKQLICRS
Trigger: GGACCTACAGATCAACTGCTTGGGTTTACTAAGGCAGCTACTGAAGTACGATCTCTTCGTATCGCTGATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000089178.11
ENSMUST00000229119.2