Pregenerated sensors for MEGF9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039270Ensembl transcript IDs: ENSMUST00000037881.3, ENSMUST00000107359.9
Found 204 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGACCCTTGGTCCTGTGACGGTTCTATGCCCCAGTATGGGGGAATaGCAGGGCAAGGAAGCAGGAGTGGGTGGGCTGGTGAGCAGGGGG | + |
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Preference number: 1 (lower is better) Translates to: ETLGPVTVLCPSMGE*QGKEAGVGGLVSRG Trigger: CCCCCTGCTCACCAGCCCACCCACTCCTGCTTCCTTGCCCTGGCATTCCCCCATACTGGGGCATAGAACCGTCACAGGACCAAGGGTCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR GCA 90 bp | CACTCAACAGTGGGAGGAGAGACCCTTGGTCCTGTGACGGTTCTATaGCCCAGTATGGGGGAATGCCAGGGCAAGGAAGCAGGAGTGGGT | + |
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Preference number: 1 (lower is better) Translates to: HSTVGGETLGPVTVL*PSMGECQGKEAGVG Trigger: ACCCACTCCTGCTTCCTTGCCCTGGCATTCCCCCATACTGGGGCATAGAACCGTCACAGGACCAAGGGTCTCTCCTCCCACTGTTGAGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR GCA 90 bp | GTTTCTTTAGAGGCAGGAACCTCTTTGAGGAGACCATCAGCTTTCTaGTCTCTGCCTGCTGTGCCTACCCTCACCATGGAAGCTTATCCT | + |
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Preference number: 1 (lower is better) Translates to: VSLEAGTSLRRPSAF*SLPAVPTLTMEAYP Trigger: AGGATAAGCTTCCATGGTGAGGGTAGGCACAGCAGGCAGAGAGCAGAAAGCTGATGGTCTCCTCAAAGAGGTTCCTGCCTCTAAAGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR TCA 90 bp | TCAGTCTTTCCCCTCCACATCAACATTCTATCACATCTGGTGAGGTaGACACTTTCCGAGCAGTCCTTTGAGAGGCCAGGTAGACTTAGG | + |
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Preference number: 1 (lower is better) Translates to: SVFPLHINILSHLVR*TLSEQSFERPGRLR Trigger: CCTAAGTCTACCTGGCCTCTCAAAGGACTGCTCGGAAAGTGTTCACCTCACCAGATGTGATAGAATGTTGATGTGGAGGGGAAAGACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR TCA 90 bp | TTCCATCAGTCTTTCCCCTCCACATCAACATTCTATCACATCTGGTaGGGTGAACACTTTCCGAGCAGTCCTTTGAGAGGCCAGGTAGAC | + |
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Preference number: 1 (lower is better) Translates to: FHQSFPSTSTFYHIW*GEHFPSSPLRGQVD Trigger: GTCTACCTGGCCTCTCAAAGGACTGCTCGGAAAGTGTTCACCTCACCAGATGTGATAGAATGTTGATGTGGAGGGGAAAGACTGATGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR CCA 90 bp | GACCATCAGCTTTCTGCTCTCTGCCTGCTGTGCCTACCCTCACCATaGAAGCTTATCCTGTGCTTTAACTCCATTTTTGAAGGAGACTCT | + |
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Preference number: 1 (lower is better) Translates to: DHQLSALCLLCLPSP*KLILCFNSIFEGDS Trigger: AGAGTCTCCTTCAAAAATGGAGTTAAAGCACAGGATAAGCTTCCATGGTGAGGGTAGGCACAGCAGGCAGAGAGCAGAAAGCTGATGGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR GCA 90 bp | GAACACTTTCCGAGCAGTCCTTTGAGAGGCCAGGTAGACTTAGGCTaGTCTGTGGGATTCAGCCTTTCCATATATACATGTGGTTTGCTA | + |
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Preference number: 1 (lower is better) Translates to: EHFPSSPLRGQVDLG*SVGFSLSIYTCGLL Trigger: TAGCAAACCACATGTATATATGGAAAGGCTGAATCCCACAGAGCAGCCTAAGTCTACCTGGCCTCTCAAAGGACTGCTCGGAAAGTGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR GCA 90 bp | AGATGGATGAACTCCAGCACTGAAGAAGCCAAACAGTCCTCATGGTaGATGGGTGACAGGTTATGCTCAAATGTCAGAGGCCTTTATTTT | + |
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Preference number: 1 (lower is better) Translates to: RWMNSSTEEAKQSSW*MGDRLCSNVRGLYF Trigger: AAAATAAAGGCCTCTGACATTTGAGCATAACCTGTCACCCATGCACCATGAGGACTGTTTGGCTTCTTCAGTGCTGGAGTTCATCCATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR TCA 90 bp | GGAATTAAGAGCAACAGACAGGCTAAGCGCACTACAGTTTGTACCTaGACATTTGCACAATACCTTTCTCAACAAACTCTACCTAGGCTC | + |
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Preference number: 1 (lower is better) Translates to: GIKSNRQAKRTTVCT*TFAQYLSQQTLPRL Trigger: GAGCCTAGGTAGAGTTTGTTGAGAAAGGTATTGTGCAAATGTTCAGGTACAAACTGTAGTGCGCTTAGCCTGTCTGTTGCTCTTAATTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR GCA 90 bp | AATGATGATGTGCATGGTATAGCGCTGAACAACTTAGACTCTCTGTaGCTCAGTTACTTCATCTATGAAATGAGCACAAGACTACTTCCT | + |
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Preference number: 1 (lower is better) Translates to: NDDVHGIALNNLDSL*LSYFIYEMSTRLLP Trigger: AGGAAGTAGTCTTGTGCTCATTTCATAGATGAAGTAACTGAGGCACAGAGAGTCTAAGTTGTTCAGCGCTATACCATGCACATCATCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR GCA 90 bp | ATTAGGTGTGTCTGGAGAATGCAGCCTGTGTTCCAGTTTCGCAATTaGAGACTTCAAAATCTATTGCTTGAATCTATGGTAAGTCAAAGA | + |
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Preference number: 1 (lower is better) Translates to: IRCVWRMQPVFQFRN*RLQNLLLESMVSQR Trigger: TCTTTGACTTACCATAGATTCAAGCAATAGATTTTGAAGTCTGCAATTGCGAAACTGGAACACAGGCTGCATTCTCCAGACACACCTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR CCA 90 bp | CAATCTACAACCTATGGATGCATAACAAATGAAAGCAGCAGTACTTaGCCTCAGGGAAAATGGCATCAAAAAGCAAGGACTAAATACACA | + |
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Preference number: 1 (lower is better) Translates to: QSTTYGCITNESSST*PQGKWHQKARTKYT Trigger: TGTGTATTTAGTCCTTGCTTTTTGATGCCATTTTCCCTGAGGCCAAGTACTGCTGCTTTCATTTGTTATGCATCCATAGGTTGTAGATTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR CCA 90 bp | TCTCAGTGCAAAGAGACTTCTTGCTGCATGTTTTCAAAACACCCTTaGATGTTTAATGGGATAACCAGATGGCATCTCATTAAACACAGT | + |
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Preference number: 1 (lower is better) Translates to: SQCKETSCCMFSKHP*MFNGITRWHLIKHS Trigger: ACTGTGTTTAATGAGATGCCATCTGGTTATCCCATTAAACATCCAAGGGTGTTTTGAAAACATGCAGCAAGAAGTCTCTTTGCACTGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR TCA 90 bp | CAAAATATTGGTCAGTACAGAAAGGATGTAAAGACTTCTATGGAATaGACTGACAAGTGGTCTTTAGCACTTACCTGTAGACTTCTTAAA | + |
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Preference number: 1 (lower is better) Translates to: QNIGQYRKDVKTSME*TDKWSLALTCRLLK Trigger: TTTAAGAAGTCTACAGGTAAGTGCTAAAGACCACTTGTCAGTTCATTCCATAGAAGTCTTTACATCCTTTCTGTACTGACCAATATTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR-3UTR GCA 90 bp | AATTGTTCCAGCATCGGGCTTTGCAGAGGACTCGTGGCATTGGGTGATAATGTCGGGAGGCAGCCATTGTaGTCAGCACTTTGGAACTCT | + |
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Preference number: 2 (lower is better) Translates to: NCSSIGLCRGLVALGDNVGRQPL*SALWNS Trigger: AGAGTTCCAAAGTGCTGAGCACAATGGCTGCCTCCC...GACATTATCACCCAATGCCACGAGTCCTCTGCAAAGCCCGATGCTGGAACAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR-3UTR GCA 90 bp | GTCTGGAGAATGCAGCCTGTGTTCCAGTTTCGCAATTGCAGACTTCAAAATCTAGCTCTCTGCCTGCTGTaGCTACCCTCACCATGGAAG | + |
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Preference number: 2 (lower is better) Translates to: VWRMQPVFQFRNCRLQNLALCLL*LPSPWK Trigger: CTTCCATGGTGAGGGTAGGCACAGCAGGCAGAGAGC...TAGATTTTGAAGTCTGCAATTGCGAAACTGGAACACAGGCTGCATTCTCCAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR-3UTR CCA 90 bp | AATTGTTCCAGCATCGGGCTTTGCAGAGGACTCGTGGCATTGGGTGATAATGTCGCCAAACAGTCCTCATaGTGCATGGGTGACAGGTTA | + |
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Preference number: 2 (lower is better) Translates to: NCSSIGLCRGLVALGDNVAKQSS*CMGDRL Trigger: TAACCTGTCACCCATGCACCATGAGGACTGTTTGGC...GACATTATCACCCAATGCCACGAGTCCTCTGCAAAGCCCGATGCTGGAACAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR-3UTR GCA 90 bp | GTCTGGAGAATGCAGCCTGTGTTCCAGTTTCGCAATTGCAGACTTCAAAATCTACAGCTTTCTGCTCTCTaGCTGCTGTGCCTACCCTCA | + |
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Preference number: 2 (lower is better) Translates to: VWRMQPVFQFRNCRLQNLQLSAL*LLCLPS Trigger: TGAGGGTAGGCACAGCAGGCAGAGAGCAGAAAGCTG...TAGATTTTGAAGTCTGCAATTGCGAAACTGGAACACAGGCTGCATTCTCCAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR CAA 90 bp | GGAGGCAATGTAGGGGATGGTGGTGGTAAGGGAACAAAGGCATGGTaGACAAGTACAACATCCACCTTCAGAAATGCACAGGACTTAATC | + |
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Preference number: 2 (lower is better) Translates to: GGNVGDGGGKGTKAW*TSTTSTFRNAQDLI Trigger: GATTAAGTCCTGTGCATTTCTGAAGGTGGATGTTGTACTTGTCAACCATGCCTTTGTTCCCTTACCACCACCATCCCCTACATTGCCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR-3UTR GCA 90 bp | AATTGTTCCAGCATCGGGCTTTGCAGAGGACTCGTGGCATTGGGTGATAATGTCATGGGTGACAGGTTATaGTCAAATGTCAGAGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: NCSSIGLCRGLVALGDNVMGDRL*SNVRGL Trigger: AAGGCCTCTGACATTTGAGCATAACCTGTCACCCAT...GACATTATCACCCAATGCCACGAGTCCTCTGCAAAGCCCGATGCTGGAACAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR-3UTR CCA 90 bp | AATTGTTCCAGCATCGGGCTTTGCAGAGGACTCGTGGCATTGGGTGATAATGTCCAGAGGCCTTTATTTTaGCAGATATGGGAGGCACAT | + |
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Preference number: 2 (lower is better) Translates to: NCSSIGLCRGLVALGDNVQRPLF*QIWEAH Trigger: ATGTGCCTCCCATATCTGCCAAAATAAAGGCCTCTG...GACATTATCACCCAATGCCACGAGTCCTCTGCAAAGCCCGATGCTGGAACAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR-3UTR TCA 90 bp | AATTGTTCCAGCATCGGGCTTTGCAGAGGACTCGTGGCATTGGGTGATAATGTCCTTAGTACAGTAAAATaGACACAATCCCTGCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: NCSSIGLCRGLVALGDNVLSTVK*TQSLPL Trigger: GAGAGGCAGGGATTGTGTTCATTTTACTGTACTAAG...GACATTATCACCCAATGCCACGAGTCCTCTGCAAAGCCCGATGCTGGAACAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR-3UTR GCA 90 bp | GTCTGGAGAATGCAGCCTGTGTTCCAGTTTCGCAATTGCAGACTTCAAAATCTACAGCCAGAGGTCAGGTaGTGTTTAAGTGAGCACTGT | + |
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Preference number: 2 (lower is better) Translates to: VWRMQPVFQFRNCRLQNLQPEVR*CLSEHC Trigger: ACAGTGCTCACTTAAACAGCACCTGACCTCTGGCTG...TAGATTTTGAAGTCTGCAATTGCGAAACTGGAACACAGGCTGCATTCTCCAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR CAA 90 bp | AGAGCAACAGACAGGCTAAGCGCACTACAGTTTGTACCTGAACATTaGCACAATACCTTTCTCAACAAACTCTACCTAGGCTCTGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: RATDRLSALQFVPEH*HNTFLNKLYLGSVQ Trigger: CTGCACAGAGCCTAGGTAGAGTTTGTTGAGAAAGGTATTGTGCAAATGTTCAGGTACAAACTGTAGTGCGCTTAGCCTGTCTGTTGCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR CAA 90 bp | GCCTACCCTCACCATGGAAGCTTATCCTGTGCTTTAACTCCATTTTaGAAGGAGACTCTTAGAAGGAAAGCCAAGCCCTTCTACAGAACT | + |
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Preference number: 2 (lower is better) Translates to: AYPHHGSLSCALTPF*KETLRRKAKPFYRT Trigger: AGTTCTGTAGAAGGGCTTGGCTTTCCTTCTAAGAGTCTCCTTCAAAAATGGAGTTAAAGCACAGGATAAGCTTCCATGGTGAGGGTAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR-3UTR CCA 90 bp | AATTGTTCCAGCATCGGGCTTTGCAGAGGACTCGTGGCATTGGGTGATAATGTCAGAAGCATCCACAAATaGGAATTTCCATTCCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: NCSSIGLCRGLVALGDNVRSIHK*EFPFQS Trigger: AGACTGGAATGGAAATTCCCATTTGTGGATGCTTCT...GACATTATCACCCAATGCCACGAGTCCTCTGCAAAGCCCGATGCTGGAACAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR-3UTR TCA 90 bp | AAGGGCTCTATTAGAAGCATCCACAAATGGGAATTTCCATTCCAGTCTTCTAGGGTGAGCACTGTTTTCTaGCAATCCAGGAGGACAACT | + |
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Preference number: 2 (lower is better) Translates to: KGSIRSIHKWEFPFQSSRVSTVF*QSRRTT Trigger: AGTTGTCCTCCTGGATTGTCAGAAAACAGTGCTCAC...CCTAGAAGACTGGAATGGAAATTCCCATTTGTGGATGCTTCTAATAGAGCCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR-3UTR TCA 90 bp | AAGGGCTCTATTAGAAGCATCCACAAATGGGAATTTCCATTCCAGTCTTCTAGGCTCATGGTGCATGGGTaGCAGGTTATGCTCAAATGT | + |
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Preference number: 2 (lower is better) Translates to: KGSIRSIHKWEFPFQSSRLMVHG*QVMLKC Trigger: ACATTTGAGCATAACCTGTCACCCATGCACCATGAG...CCTAGAAGACTGGAATGGAAATTCCCATTTGTGGATGCTTCTAATAGAGCCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR-3UTR TCA 90 bp | AAGGGCTCTATTAGAAGCATCCACAAATGGGAATTTCCATTCCAGTCTTCTAGGACCCTGAGAAAAAGGTaGGGTCTCCTACAAAGGATG | + |
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Preference number: 2 (lower is better) Translates to: KGSIRSIHKWEFPFQSSRTLRKR*GLLQRM Trigger: CATCCTTTGTAGGAGACCTCACCTTTTTCTCAGGGT...CCTAGAAGACTGGAATGGAAATTCCCATTTGTGGATGCTTCTAATAGAGCCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR-3UTR TCA 90 bp | AATTGTTCCAGCATCGGGCTTTGCAGAGGACTCGTGGCATTGGGTGATAATGTCCAGTTACTTCATCTATaGAATGAGCACAAGACTACT | + |
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Preference number: 2 (lower is better) Translates to: NCSSIGLCRGLVALGDNVQLLHL*NEHKTT Trigger: AGTAGTCTTGTGCTCATTTCATAGATGAAGTAACTG...GACATTATCACCCAATGCCACGAGTCCTCTGCAAAGCCCGATGCTGGAACAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR-3UTR TCA 90 bp | AAGGGCTCTATTAGAAGCATCCACAAATGGGAATTTCCATTCCAGTCTTCTAGGGTCATTTCTAAACCCTaGGAAAAAGGTGAGGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: KGSIRSIHKWEFPFQSSRVISKP*EKGEVS Trigger: GGAGACCTCACCTTTTTCTCAGGGTTTAGAAATGAC...CCTAGAAGACTGGAATGGAAATTCCCATTTGTGGATGCTTCTAATAGAGCCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR-3UTR CCA 90 bp | AAGGGCTCTATTAGAAGCATCCACAAATGGGAATTTCCATTCCAGTCTTCTAGGTGGCCTCAGGGAAAATaGCATCAAAAAGCAAGGACT | + |
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Preference number: 2 (lower is better) Translates to: KGSIRSIHKWEFPFQSSRWPQGK*HQKART Trigger: AGTCCTTGCTTTTTGATGCCATTTTCCCTGAGGCCA...CCTAGAAGACTGGAATGGAAATTCCCATTTGTGGATGCTTCTAATAGAGCCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR-3UTR TCA 90 bp | AAGGGCTCTATTAGAAGCATCCACAAATGGGAATTTCCATTCCAGTCTTCTAGGCAGGTGCTGTTTAAGTaGGCACTGTTTTCTGACAAT | + |
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Preference number: 2 (lower is better) Translates to: KGSIRSIHKWEFPFQSSRQVLFK*ALFSDN Trigger: ATTGTCAGAAAACAGTGCTCACTTAAACAGCACCTG...CCTAGAAGACTGGAATGGAAATTCCCATTTGTGGATGCTTCTAATAGAGCCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR-3UTR TCA 90 bp | AAGGGCTCTATTAGAAGCATCCACAAATGGGAATTTCCATTCCAGTCTTCTAGGAAAGAAGTCTTTTCCTaGGGAGTTTACACTGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: KGSIRSIHKWEFPFQSSRKEVFS*GVYTEQ Trigger: CTGCTCAGTGTAAACTCCTCAGGAAAAGACTTCTTT...CCTAGAAGACTGGAATGGAAATTCCCATTTGTGGATGCTTCTAATAGAGCCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR-3UTR TCA 90 bp | AAGGGCTCTATTAGAAGCATCCACAAATGGGAATTTCCATTCCAGTCTTCTAGGAGATATGAAGATGGATaGACTCCAGCACTGAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: KGSIRSIHKWEFPFQSSRRYEDG*TPALKK Trigger: CTTCTTCAGTGCTGGAGTTCATCCATCTTCATATCT...CCTAGAAGACTGGAATGGAAATTCCCATTTGTGGATGCTTCTAATAGAGCCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR-3UTR CCA 90 bp | AAGGGCTCTATTAGAAGCATCCACAAATGGGAATTTCCATTCCAGTCTTCTAGGCAGTGTAAAACAGAGTaGCTAATTAGGTGTGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: KGSIRSIHKWEFPFQSSRQCKTE*LIRCVW Trigger: CCAGACACACCTAATTAGCCACTCTGTTTTACACTG...CCTAGAAGACTGGAATGGAAATTCCCATTTGTGGATGCTTCTAATAGAGCCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR CAA 90 bp | TTTGACTTCTTCAGGTTAATCACCATGTTCCTGCTGCTTAGCCATTaGCTCAGAGTGATAGCAAAAGACAAATTAACCGTCTGTCACCTT | + |
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Preference number: 2 (lower is better) Translates to: FDFFRLITMFLLLSH*LRVIAKDKLTVCHL Trigger: AAGGTGACAGACGGTTAATTTGTCTTTTGCTATCACTCTGAGCAAATGGCTAAGCAGCAGGAACATGGTGATTAACCTGAAGAAGTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR-3UTR TCA 90 bp | AAGGGCTCTATTAGAAGCATCCACAAATGGGAATTTCCATTCCAGTCTTCTAGGGTCTCCTACAAAGGATaGCCAACGTCTTTATTTTTC | + |
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Preference number: 2 (lower is better) Translates to: KGSIRSIHKWEFPFQSSRVSYKG*PTSLFF Trigger: GAAAAATAAAGACGTTGGTCATCCTTTGTAGGAGAC...CCTAGAAGACTGGAATGGAAATTCCCATTTGTGGATGCTTCTAATAGAGCCCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR CAA 90 bp | ATGCAGCCTGTGTTCCAGTTTCGCAATTGCAGACTTCAAAATCTATaGCTTGAATCTATGGTAAGTCAAAGAGCATATGACTCTAGGTTG | + |
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Preference number: 2 (lower is better) Translates to: MQPVFQFRNCRLQNL*LESMVSQRAYDSRL Trigger: CAACCTAGAGTCATATGCTCTTTGACTTACCATAGATTCAAGCAATAGATTTTGAAGTCTGCAATTGCGAAACTGGAACACAGGCTGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR-3UTR TCA 90 bp | AAGGGCTCTATTAGAAGCATCCACAAATGGGAATTTCCATTCCAGTCTTCTAGGTTTCCAAAGTGGAGATaGATTCTTCCATCAGTCTTT | + |
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Preference number: 2 (lower is better) Translates to: KGSIRSIHKWEFPFQSSRFPKWR*ILPSVF Trigger: AAAGACTGATGGAAGAATTCATCTCCACTTTGGAAA...CCTAGAAGACTGGAATGGAAATTCCCATTTGTGGATGCTTCTAATAGAGCCCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR-3UTR GCA 90 bp | GTCTGGAGAATGCAGCCTGTGTTCCAGTTTCGCAATTGCAGACTTCAAAATCTATTGTACCTGAACATTTaGACAATACCTTTCTCAACA | + |
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Preference number: 2 (lower is better) Translates to: VWRMQPVFQFRNCRLQNLLYLNI*TIPFST Trigger: TGTTGAGAAAGGTATTGTGCAAATGTTCAGGTACAA...TAGATTTTGAAGTCTGCAATTGCGAAACTGGAACACAGGCTGCATTCTCCAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR-3UTR GCA 90 bp | AAGGGCTCTATTAGAAGCATCCACAAATGGGAATTTCCATTCCAGTCTTCTAGGTGGAAGCTTATCCTGTaGTTTAACTCCATTTTTGAA | + |
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Preference number: 2 (lower is better) Translates to: KGSIRSIHKWEFPFQSSRWKLIL*FNSIFE Trigger: TTCAAAAATGGAGTTAAAGCACAGGATAAGCTTCCA...CCTAGAAGACTGGAATGGAAATTCCCATTTGTGGATGCTTCTAATAGAGCCCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR GCA 72 bp | GGTCCTGTGACGGTTCTATGCCCCAGTATGGGGGAATaGCAGGGCAAGGAAGCAGGAGTGGGTGGGCTGGTG | + |
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Preference number: 3 (lower is better) Translates to: GPVTVLCPSMGE*QGKEAGVGGLV Trigger: CACCAGCCCACCCACTCCTGCTTCCTTGCCCTGGCATTCCCCCATACTGGGGCATAGAACCGTCACAGGACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR TCA 72 bp | GTCACTCAACAGTGGGAGGAGAGACCCTTGGTCCTGTaGCGGTTCTATGCCCCAGTATGGGGGAATGCCAGG | + |
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Preference number: 3 (lower is better) Translates to: VTQQWEERPLVL*RFYAPVWGNAR Trigger: CCTGGCATTCCCCCATACTGGGGCATAGAACCGTCACAGGACCAAGGGTCTCTCCTCCCACTGTTGAGTGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR CCA 72 bp | GAGGCTCTGCCAGTGCCTGACAAGTACAGAAGTGGATaGTCACAGCCAACCATTGGATGGAGCACAGGGTCC | + |
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Preference number: 3 (lower is better) Translates to: EALPVPDKYRSG*SQPTIGWSTGS Trigger: GGACCCTGTGCTCCATCCAATGGTTGGCTGTGACCATCCACTTCTGTACTTGTCAGGCACTGGCAGAGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR GCA 72 bp | GAGGCAGGAACCTCTTTGAGGAGACCATCAGCTTTCTaGTCTCTGCCTGCTGTGCCTACCCTCACCATGGAA | + |
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Preference number: 3 (lower is better) Translates to: EAGTSLRRPSAF*SLPAVPTLTME Trigger: TTCCATGGTGAGGGTAGGCACAGCAGGCAGAGAGCAGAAAGCTGATGGTCTCCTCAAAGAGGTTCCTGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| 3UTR GCA 72 bp | AGCCTGATACTGCTGACTCCTGAGAGGCTCTGCCAGTaGCTGACAAGTACAGAAGTGGATGGTCACAGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: SLILLTPERLCQ*LTSTEVDGHSQ Trigger: TTGGCTGTGACCATCCACTTCTGTACTTGTCAGGCACTGGCAGAGCCTCTCAGGAGTCAGCAGTATCAGGCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| 3UTR CCA 72 bp | GAGACGCATGGCTCTAGCTGCATATGTAGCAGAGGATaGCCTAGTCACTCAACAGTGGGAGGAGAGACCCTT | + |
|
Preference number: 3 (lower is better) Translates to: ETHGSSCICSRG*PSHSTVGGETL Trigger: AAGGGTCTCTCCTCCCACTGTTGAGTGACTAGGCCATCCTCTGCTACATATGCAGCTAGAGCCATGCGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| 3UTR TCA 72 bp | AGGATGGAACTTGGGGACTTGGGCTTGGTATGCAAGTaGCCTACACCTAAGCCATATCCCCGGCCCAGTAAT | + |
|
Preference number: 3 (lower is better) Translates to: RMELGDLGLVCK*PTPKPYPRPSN Trigger: ATTACTGGGCCGGGGATATGGCTTAGGTGTAGGTCACTTGCATACCAAGCCCAAGTCCCCAAGTTCCATCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| 3UTR TCA 72 bp | AGGCTCTGTGCAGCCAGAGGTCAGGTGCTGTTTAAGTaGGCACTGTTTTCTGACAATCCAGGAGGACAACTC | + |
|
Preference number: 3 (lower is better) Translates to: RLCAARGQVLFK*ALFSDNPGGQL Trigger: GAGTTGTCCTCCTGGATTGTCAGAAAACAGTGCTCACTTAAACAGCACCTGACCTCTGGCTGCACAGAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| 3UTR TCA 72 bp | CCCCTCCACATCAACATTCTATCACATCTGGTGAGGTaGACACTTTCCGAGCAGTCCTTTGAGAGGCCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: PLHINILSHLVR*TLSEQSFERPG Trigger: ACCTGGCCTCTCAAAGGACTGCTCGGAAAGTGTTCACCTCACCAGATGTGATAGAATGTTGATGTGGAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| 3UTR CCA 72 bp | CTCCTTTCCACTTATTTTGGCAGGAGATGGGGTATCTaGGAGGCAGCCATTGTGCTCAGCACTTTGGAACTC | + |
|
Preference number: 3 (lower is better) Translates to: LLSTYFGRRWGI*EAAIVLSTLEL Trigger: GAGTTCCAAAGTGCTGAGCACAATGGCTGCCTCCCAGATACCCCATCTCCTGCCAAAATAAGTGGAAAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| 3UTR GCA 72 bp | AACTCCAGCACTGAAGAAGCCAAACAGTCCTCATGGTaGATGGGTGACAGGTTATGCTCAAATGTCAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: NSSTEEAKQSSW*MGDRLCSNVRG Trigger: GCCTCTGACATTTGAGCATAACCTGTCACCCATGCACCATGAGGACTGTTTGGCTTCTTCAGTGCTGGAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| 3UTR GCA 72 bp | TTGGCAGGAGATGGGGTATCTGGGAGGCAGCCATTGTaGTCAGCACTTTGGAACTCTGTGATGTATAGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: LAGDGVSGRQPL*SALWNSVMYSQ Trigger: TTGACTATACATCACAGAGTTCCAAAGTGCTGAGCACAATGGCTGCCTCCCAGATACCCCATCTCCTGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| 3UTR CCA 72 bp | CCAGCACTGAAGAAGCCAAACAGTCCTCATGGTGCATaGGTGACAGGTTATGCTCAAATGTCAGAGGCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: PALKKPNSPHGA*VTGYAQMSEAF Trigger: AAAGGCCTCTGACATTTGAGCATAACCTGTCACCCATGCACCATGAGGACTGTTTGGCTTCTTCAGTGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| 3UTR CCA 72 bp | GGCTTTTATCTCCTTTCCACTTATTTTGGCAGGAGATaGGGTATCTGGGAGGCAGCCATTGTGCTCAGCACT | + |
|
Preference number: 3 (lower is better) Translates to: GFYLLSTYFGRR*GIWEAAIVLST Trigger: AGTGCTGAGCACAATGGCTGCCTCCCAGATACCCCATCTCCTGCCAAAATAAGTGGAAAGGAGATAAAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| 3UTR TCA 72 bp | TCTTTCCCCTCCACATCAACATTCTATCACATCTGGTaGGGTGAACACTTTCCGAGCAGTCCTTTGAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: SFPSTSTFYHIW*GEHFPSSPLRG Trigger: GCCTCTCAAAGGACTGCTCGGAAAGTGTTCACCTCACCAGATGTGATAGAATGTTGATGTGGAGGGGAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| 3UTR-3UTR CAA 90 bp | GTCTGGAGAATGCAGCCTGTGTTCCAGTTTCGCAATTGCAGACTTCAAAATCTATTTCCGAGCAGTCCTTaGAGAGGCCAGGTAGACTTA | + |
|
Preference number: 3 (lower is better) Translates to: VWRMQPVFQFRNCRLQNLFPSSP*RGQVDL Trigger: TAAGTCTACCTGGCCTCTCAAAGGACTGCTCGGAAA...TAGATTTTGAAGTCTGCAATTGCGAAACTGGAACACAGGCTGCATTCTCCAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| 3UTR-3UTR CAA 90 bp | AATTGTTCCAGCATCGGGCTTTGCAGAGGACTCGTGGCATTGGGTGATAATGTCCTTCTACAGAACTTCTaGGCACCTTTCTTAGTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: NCSSIGLCRGLVALGDNVLLQNF*APFLVY Trigger: GTAGACTAAGAAAGGTGCCAAGAAGTTCTGTAGAAG...GACATTATCACCCAATGCCACGAGTCCTCTGCAAAGCCCGATGCTGGAACAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGCTCTATTAGAAGCATCCACAAATGGGAATTTCCATTCCAGTCTTCTAGGGAGGCAGGAACCTCTTaGAGGAGACCATCAGCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: KGSIRSIHKWEFPFQSSREAGTS*RRPSAF Trigger: GAAAGCTGATGGTCTCCTCAAAGAGGTTCCTGCCTC...CCTAGAAGACTGGAATGGAAATTCCCATTTGTGGATGCTTCTAATAGAGCCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| 3UTR GCA 72 bp | TCAAAGAAAACACATGGTGAGACGCATGGCTCTAGCTaGATATGTAGCAGAGGATGGCCTAGTCACTCAACA | + |
|
Preference number: 3 (lower is better) Translates to: SKKTHGETHGSS*ICSRGWPSHST Trigger: TGTTGAGTGACTAGGCCATCCTCTGCTACATATGCAGCTAGAGCCATGCGTCTCACCATGTGTTTTCTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| 3UTR CCA 72 bp | CTTTCTGCTCTCTGCCTGCTGTGCCTACCCTCACCATaGAAGCTTATCCTGTGCTTTAACTCCATTTTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: LSALCLLCLPSP*KLILCFNSIFE Trigger: TTCAAAAATGGAGTTAAAGCACAGGATAAGCTTCCATGGTGAGGGTAGGCACAGCAGGCAGAGAGCAGAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| 3UTR CCA 72 bp | ATGAACTCCAGCACTGAAGAAGCCAAACAGTCCTCATaGTGCATGGGTGACAGGTTATGCTCAAATGTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: MNSSTEEAKQSS*CMGDRLCSNVR Trigger: TCTGACATTTGAGCATAACCTGTCACCCATGCACCATGAGGACTGTTTGGCTTCTTCAGTGCTGGAGTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| 3UTR TCA 72 bp | GAAGGGATTTGCAGACTCATAGGAGGAACAATAATATaGACTGACCAGTACTCTCAGAGCTCCCTGGGACTA | + |
|
Preference number: 3 (lower is better) Translates to: EGICRLIGGTII*TDQYSQSSLGL Trigger: TAGTCCCAGGGAGCTCTGAGAGTACTGGTCAGTTCATATTATTGTTCCTCCTATGAGTCTGCAAATCCCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| 3UTR TCA 72 bp | TGGCTCTCAATCTACAACCTATGGATGCATAACAAATaGAAGCAGCAGTACTTGGCCTCAGGGAAAATGGCA | + |
|
Preference number: 3 (lower is better) Translates to: WLSIYNLWMHNK*KQQYLASGKMA Trigger: TGCCATTTTCCCTGAGGCCAAGTACTGCTGCTTTCATTTGTTATGCATCCATAGGTTGTAGATTGAGAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| 3UTR CCA 72 bp | ATGCTATTGTTTATTATAAGTGCTGAGGATGGAACTTaGGGACTTGGGCTTGGTATGCAAGTGACCTACACC | + |
|
Preference number: 3 (lower is better) Translates to: MLLFIISAEDGT*GLGLGMQVTYT Trigger: GGTGTAGGTCACTTGCATACCAAGCCCAAGTCCCCAAGTTCCATCCTCAGCACTTATAATAAACAATAGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| 3UTR GCA 72 bp | GTCACTTTTCTTGGCTCTCAATCTACAACCTATGGATaGATAACAAATGAAAGCAGCAGTACTTGGCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: VTFLGSQSTTYG*ITNESSSTWPQ Trigger: CTGAGGCCAAGTACTGCTGCTTTCATTTGTTATGCATCCATAGGTTGTAGATTGAGAGCCAAGAAAAGTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| 3UTR-3UTR CAA 90 bp | GTCTGGAGAATGCAGCCTGTGTTCCAGTTTCGCAATTGCAGACTTCAAAATCTAGCTTTAACTCCATTTTaGAAGGAGACTCTTAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: VWRMQPVFQFRNCRLQNLALTPF*KETLRR Trigger: CCTTCTAAGAGTCTCCTTCAAAAATGGAGTTAAAGC...TAGATTTTGAAGTCTGCAATTGCGAAACTGGAACACAGGCTGCATTCTCCAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| 3UTR-3UTR CAA 90 bp | GTCTGGAGAATGCAGCCTGTGTTCCAGTTTCGCAATTGCAGACTTCAAAATCTAGCATATGACTCTAGGTaGAGAGAGGAAAGATTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: VWRMQPVFQFRNCRLQNLAYDSR*REERLE Trigger: TTCTAATCTTTCCTCTCTCAACCTAGAGTCATATGC...TAGATTTTGAAGTCTGCAATTGCGAAACTGGAACACAGGCTGCATTCTCCAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| 3UTR TCA 72 bp | AGCAACAGACAGGCTAAGCGCACTACAGTTTGTACCTaGACATTTGCACAATACCTTTCTCAACAAACTCTA | + |
|
Preference number: 3 (lower is better) Translates to: SNRQAKRTTVCT*TFAQYLSQQTL Trigger: TAGAGTTTGTTGAGAAAGGTATTGTGCAAATGTTCAGGTACAAACTGTAGTGCGCTTAGCCTGTCTGTTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| 3UTR TCA 72 bp | ATTCTGAATATGAATATTTTGTCAGAGAGCTTTCCTTaGAAGATGCAGAAACCCACCTCCTACCCACACACC | + |
|
Preference number: 3 (lower is better) Translates to: ILNMNILSESFP*KMQKPTSYPHT Trigger: GGTGTGTGGGTAGGAGGTGGGTTTCTGCATCTTTCAAGGAAAGCTCTCTGACAAAATATTCATATTCAGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| 3UTR GCA 72 bp | GTCTGGAGAATGCAGCCTGTGTTCCAGTTTCGCAATTaGAGACTTCAAAATCTATTGCTTGAATCTATGGTA | + |
|
Preference number: 3 (lower is better) Translates to: VWRMQPVFQFRN*RLQNLLLESMV Trigger: TACCATAGATTCAAGCAATAGATTTTGAAGTCTGCAATTGCGAAACTGGAACACAGGCTGCATTCTCCAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| 3UTR TCA 72 bp | GGTCAGTACAGAAAGGATGTAAAGACTTCTATGGAATaGACTGACAAGTGGTCTTTAGCACTTACCTGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: GQYRKDVKTSME*TDKWSLALTCR Trigger: TCTACAGGTAAGTGCTAAAGACCACTTGTCAGTTCATTCCATAGAAGTCTTTACATCCTTTCTGTACTGACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| 3UTR CCA 72 bp | TCTCTTAAGATCTGTATCATGGAATCTCTATTTAGCTaGAATCTCGACTGTTTACTTTGGCTCTTAAACTCA | + |
|
Preference number: 3 (lower is better) Translates to: SLKICIMESLFS*NLDCLLWLLNS Trigger: TGAGTTTAAGAGCCAAAGTAAACAGTCGAGATTCCAGCTAAATAGAGATTCCATGATACAGATCTTAAGAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR TCA 90 bp | AATTGTTCCAGCATCGGGCTTTGCAGAGGACTCGTGGCATTGGGTGATAATGTCCCCCGCCGCCACCGGTaGCATTCCCTGCCGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NCSSIGLCRGLVALGDNVPRRHR*HSLPRL Trigger: CAGCCTCGGCAGGGAATGTCACCGGTGGCGGCGGGG...GACATTATCACCCAATGCCACGAGTCCTCTGCAAAGCCCGATGCTGGAACAATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR CCA 90 bp | AGCAGTCCTTTGAGAGGCCAGGTAGACTTAGGCTGCTCTGTGGGATTCAGCCTTTGCTCGCAAGGGTGGTaGGCGCGGGTCTGGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSPLRGQVDLGCSVGFSLCSQGW*ARVWRV Trigger: CACCCTCCAGACCCGCGCCCACCACCCTTGCGAGCA...AAGGCTGAATCCCACAGAGCAGCCTAAGTCTACCTGGCCTCTCAAAGGACTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR TCA 90 bp | AGCAGTCCTTTGAGAGGCCAGGTAGACTTAGGCTGCTCTGTGGGATTCAGCCTTAAGCCTGAGCGGTGGTaGCTACAGAGGTGGTCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SSPLRGQVDLGCSVGFSLKPERW*LQRWSA Trigger: CGCCGACCACCTCTGTAGTCACCACCGCTCAGGCTT...AAGGCTGAATCCCACAGAGCAGCCTAAGTCTACCTGGCCTCTCAAAGGACTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR CCA 90 bp | AATTGTTCCAGCATCGGGCTTTGCAGAGGACTCGTGGCATTGGGTGATAATGTCTCGGCAGGCTCCTCATaGCGCGCTCGGCTCCGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NCSSIGLCRGLVALGDNVSAGSS*RARLRH Trigger: ATGGCGGAGCCGAGCGCGCCATGAGGAGCCTGCCGA...GACATTATCACCCAATGCCACGAGTCCTCTGCAAAGCCCGATGCTGGAACAATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR TCA 90 bp | AATTGTTCCAGCATCGGGCTTTGCAGAGGACTCGTGGCATTGGGTGATAATGTCGGGTCTGGAGGGTGGTaGTTCCGTGGTGGGAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NCSSIGLCRGLVALGDNVGSGGW*FRGGSV Trigger: CACACTCCCACCACGGAATCACCACCCTCCAGACCC...GACATTATCACCCAATGCCACGAGTCCTCTGCAAAGCCCGATGCTGGAACAATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR TCA 90 bp | AGCAGTCCTTTGAGAGGCCAGGTAGACTTAGGCTGCTCTGTGGGATTCAGCCTTCCATGTGGACTGCAGTaGCATGGCAGGCAGAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: SSPLRGQVDLGCSVGFSLPCGLQ*HGRQRP Trigger: TGGTCTCTGCCTGCCATGTCACTGCAGTCCACATGG...AAGGCTGAATCCCACAGAGCAGCCTAAGTCTACCTGGCCTCTCAAAGGACTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR CCA 90 bp | AGCAGTCCTTTGAGAGGCCAGGTAGACTTAGGCTGCTCTGTGGGATTCAGCCTTGACCGGTTGTTGCACTaGCAAGGCAAGCAGCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSPLRGQVDLGCSVGFSLDRLLH*QGKQPV Trigger: GACAGGCTGCTTGCCTTGCCAGTGCAACAACCGGTC...AAGGCTGAATCCCACAGAGCAGCCTAAGTCTACCTGGCCTCTCAAAGGACTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR TCA 90 bp | AATTGTTCCAGCATCGGGCTTTGCAGAGGACTCGTGGCATTGGGTGATAATGTCGGAGTGCTGGAAGCCTaGGCGGTGGTGACTACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NCSSIGLCRGLVALGDNVGVLEA*AVVTTE Trigger: CTCTGTAGTCACCACCGCTCAGGCTTCCAGCACTCC...GACATTATCACCCAATGCCACGAGTCCTCTGCAAAGCCCGATGCTGGAACAATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR GCA 90 bp | AAGGGCTCTATTAGAAGCATCCACAAATGGGAATTTCCATTCCAGTCTTCTAGGGGCTGTGGAAGCGGCTaGGGCGGCCGCGCAGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: KGSIRSIHKWEFPFQSSRGCGSG*GGRAAQ Trigger: TTGTGCTGCGCGGCCGCCGCAGCCGCTTCCACAGCC...CCTAGAAGACTGGAATGGAAATTCCCATTTGTGGATGCTTCTAATAGAGCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR CCA 90 bp | GTCTGGAGAATGCAGCCTGTGTTCCAGTTTCGCAATTGCAGACTTCAAAATCTACTGTGCTCGCAAGGGTaGTGGGCGCGGGTCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VWRMQPVFQFRNCRLQNLLCSQG*WARVWR Trigger: CCTCCAGACCCGCGCCCACCACCCTTGCGAGCACAG...TAGATTTTGAAGTCTGCAATTGCGAAACTGGAACACAGGCTGCATTCTCCAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR GCA 90 bp | AGCAGTCCTTTGAGAGGCCAGGTAGACTTAGGCTGCTCTGTGGGATTCAGCCTTGCGATGGCACTGTTTTaGGGCATCAGGACTCGGATA | + |
|
Preference number: 4 (lower is better) Translates to: SSPLRGQVDLGCSVGFSLAMALF*GIRTRI Trigger: TATCCGAGTCCTGATGCCGCAAAACAGTGCCATCGC...AAGGCTGAATCCCACAGAGCAGCCTAAGTCTACCTGGCCTCTCAAAGGACTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR CCA 90 bp | AGCAGTCCTTTGAGAGGCCAGGTAGACTTAGGCTGCTCTGTGGGATTCAGCCTTTGGACTGCAGTGACATaGCAGGCAGAGACCAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSPLRGQVDLGCSVGFSLWTAVT*QAETNS Trigger: ACTGTTGGTCTCTGCCTGCCATGTCACTGCAGTCCA...AAGGCTGAATCCCACAGAGCAGCCTAAGTCTACCTGGCCTCTCAAAGGACTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR CCA 90 bp | AGCAGTCCTTTGAGAGGCCAGGTAGACTTAGGCTGCTCTGTGGGATTCAGCCTTGCTAACAGCTCCATGTaGACTGCAGTGACATGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSPLRGQVDLGCSVGFSLANSSM*TAVTWQ Trigger: CTGCCATGTCACTGCAGTCCACATGGAGCTGTTAGC...AAGGCTGAATCCCACAGAGCAGCCTAAGTCTACCTGGCCTCTCAAAGGACTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR GCA 90 bp | GTCTGGAGAATGCAGCCTGTGTTCCAGTTTCGCAATTGCAGACTTCAAAATCTATTGGGGTCCCTGGAGTaGTGGAAGCCTGAGCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VWRMQPVFQFRNCRLQNLLGSLE*WKPERW Trigger: CCACCGCTCAGGCTTCCAGCACTCCAGGGACCCCAA...TAGATTTTGAAGTCTGCAATTGCGAAACTGGAACACAGGCTGCATTCTCCAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR GCA 90 bp | AGCAGTCCTTTGAGAGGCCAGGTAGACTTAGGCTGCTCTGTGGGATTCAGCCTTCAATCCCGACACATCTaGATTGGGGATGCTGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: SSPLRGQVDLGCSVGFSLQSRHI*IGDAVM Trigger: CATGACAGCATCCCCAATGCAGATGTGTCGGGATTG...AAGGCTGAATCCCACAGAGCAGCCTAAGTCTACCTGGCCTCTCAAAGGACTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR GCA 90 bp | AATTGTTCCAGCATCGGGCTTTGCAGAGGACTCGTGGCATTGGGTGATAATGTCGTTGTCAGGGTCAGCTaGCCATTGGGAGCCACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NCSSIGLCRGLVALGDNVVVRVS*PLGATS Trigger: TGAAGTGGCTCCCAATGGGCAGCTGACCCTGACAAC...GACATTATCACCCAATGCCACGAGTCCTCTGCAAAGCCCGATGCTGGAACAATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR CCA 90 bp | GTCTGGAGAATGCAGCCTGTGTTCCAGTTTCGCAATTGCAGACTTCAAAATCTAGGCAGTTGGGGTCCCTaGAGTGCTGGAAGCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VWRMQPVFQFRNCRLQNLGSWGP*SAGSLS Trigger: GCTCAGGCTTCCAGCACTCCAGGGACCCCAACTGCC...TAGATTTTGAAGTCTGCAATTGCGAAACTGGAACACAGGCTGCATTCTCCAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR CCA 90 bp | AATTGTTCCAGCATCGGGCTTTGCAGAGGACTCGTGGCATTGGGTGATAATGTCCACTGCCCTGTGGTCTaGTTGCAGCGCTTTACATCC | + |
|
Preference number: 4 (lower is better) Translates to: NCSSIGLCRGLVALGDNVHCPVV*LQRFTS Trigger: GGATGTAAAGCGCTGCAACCAGACCACAGGGCAGTG...GACATTATCACCCAATGCCACGAGTCCTCTGCAAAGCCCGATGCTGGAACAATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR CCA 90 bp | AATTGTTCCAGCATCGGGCTTTGCAGAGGACTCGTGGCATTGGGTGATAATGTCGGGTCAGCTGCCCATTaGGAGCCACTTCATTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NCSSIGLCRGLVALGDNVGSAAH*EPLHWH Trigger: ATGCCAATGAAGTGGCTCCCAATGGGCAGCTGACCC...GACATTATCACCCAATGCCACGAGTCCTCTGCAAAGCCCGATGCTGGAACAATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR TCA 90 bp | AGCAGTCCTTTGAGAGGCCAGGTAGACTTAGGCTGCTCTGTGGGATTCAGCCTTAACCCAGTGGTGTTATaGAGGCAGTTGATGCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSPLRGQVDLGCSVGFSLNPVVL*RQLMHS Trigger: TGAGTGCATCAACTGCCTTCATAACACCACTGGGTT...AAGGCTGAATCCCACAGAGCAGCCTAAGTCTACCTGGCCTCTCAAAGGACTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR TCA 90 bp | AATTGTTCCAGCATCGGGCTTTGCAGAGGACTCGTGGCATTGGGTGATAATGTCAACAGGGGTGGGCACTaGTGTGGTCAAAGAGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: NCSSIGLCRGLVALGDNVNRGGH*CGQRGI Trigger: AATGCCTCTTTGACCACATCAGTGCCCACCCCTGTT...GACATTATCACCCAATGCCACGAGTCCTCTGCAAAGCCCGATGCTGGAACAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| 3UTR CAA 72 bp | TGTTCCAGCATCGGGCTTTGCAGAGGACTCGTGGCATaGGGTGATAATGTCTCCAGAGGAATGAAAACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CSSIGLCRGLVA*GDNVSRGMKTQ Trigger: CTGGGTTTTCATTCCTCTGGAGACATTATCACCCAATGCCACGAGTCCTCTGCAAAGCCCGATGCTGGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR TCA 90 bp | AGCAGTCCTTTGAGAGGCCAGGTAGACTTAGGCTGCTCTGTGGGATTCAGCCTTAGACAAGCACCTGTGTaGACATCACAACTATCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSPLRGQVDLGCSVGFSLRQAPV*TSQLSD Trigger: GTCTGATAGTTGTGATGTTCACACAGGTGCTTGTCT...AAGGCTGAATCCCACAGAGCAGCCTAAGTCTACCTGGCCTCTCAAAGGACTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR TCA 90 bp | AGCAGTCCTTTGAGAGGCCAGGTAGACTTAGGCTGCTCTGTGGGATTCAGCCTTTACATCAGCAAGAGCTaGGGTGCTGTTTTCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSPLRGQVDLGCSVGFSLYISKS*GAVFRR Trigger: TCTTCTGAAAACAGCACCTCAGCTCTTGCTGATGTA...AAGGCTGAATCCCACAGAGCAGCCTAAGTCTACCTGGCCTCTCAAAGGACTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR GCA 90 bp | AGCAGTCCTTTGAGAGGCCAGGTAGACTTAGGCTGCTCTGTGGGATTCAGCCTTCGCACTGTGTGCAGATaGTGTCAGAATTGTAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSPLRGQVDLGCSVGFSLRTVCR*CQNCNS Trigger: GCTATTACAATTCTGACAGCATCTGCACACAGTGCG...AAGGCTGAATCCCACAGAGCAGCCTAAGTCTACCTGGCCTCTCAAAGGACTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR CCA 90 bp | AATTGTTCCAGCATCGGGCTTTGCAGAGGACTCGTGGCATTGGGTGATAATGTCAATCACACTGCCCTGTaGTCTGGTTGCAGCGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: NCSSIGLCRGLVALGDNVNHTAL*SGCSAL Trigger: TAAAGCGCTGCAACCAGACCACAGGGCAGTGTGATT...GACATTATCACCCAATGCCACGAGTCCTCTGCAAAGCCCGATGCTGGAACAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR TCA 90 bp | AAGGGCTCTATTAGAAGCATCCACAAATGGGAATTTCCATTCCAGTCTTCTAGGGGGTCCACATGGCCATaGCATTCGCACTGTGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KGSIRSIHKWEFPFQSSRGSTWP*HSHCVQ Trigger: CTGCACACAGTGCGAATGTCATGGCCATGTGGACCC...CCTAGAAGACTGGAATGGAAATTCCCATTTGTGGATGCTTCTAATAGAGCCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR GCA 90 bp | AATTGTTCCAGCATCGGGCTTTGCAGAGGACTCGTGGCATTGGGTGATAATGTCGGTAAAAGCCCTCTTTaGAGGTGTCACAGTGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: NCSSIGLCRGLVALGDNVGKSPL*RCHSED Trigger: GTCTTCACTGTGACACCTGCAAAGAGGGCTTTTACC...GACATTATCACCCAATGCCACGAGTCCTCTGCAAAGCCCGATGCTGGAACAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR GCA 90 bp | GTCTGGAGAATGCAGCCTGTGTTCCAGTTTCGCAATTGCAGACTTCAAAATCTACAGCTCCATGTGGACTaGAGTGACATGGCAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VWRMQPVFQFRNCRLQNLQLHVD*SDMAGR Trigger: TCTGCCTGCCATGTCACTGCAGTCCACATGGAGCTG...TAGATTTTGAAGTCTGCAATTGCGAAACTGGAACACAGGCTGCATTCTCCAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| 3UTR CAA 72 bp | ATTTTGGCAGGAGATGGGGTATCTGGGAGGCAGCCATaGTGCTCAGCACTTTGGAACTCTGTGATGTATAGT | + |
|
Preference number: 4 (lower is better) Translates to: ILAGDGVSGRQP*CSALWNSVMYS Trigger: ACTATACATCACAGAGTTCCAAAGTGCTGAGCACAATGGCTGCCTCCCAGATACCCCATCTCCTGCCAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| 3UTR CAA 72 bp | GTAGGGGATGGTGGTGGTAAGGGAACAAAGGCATGGTaGACAAGTACAACATCCACCTTCAGAAATGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VGDGGGKGTKAW*TSTTSTFRNAQ Trigger: CTGTGCATTTCTGAAGGTGGATGTTGTACTTGTCAACCATGCCTTTGTTCCCTTACCACCACCATCCCCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR GCA 90 bp | GTCTGGAGAATGCAGCCTGTGTTCCAGTTTCGCAATTGCAGACTTCAAAATCTAGCCCTGTGGTCTGGTTaGAGCGCTTTACATCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VWRMQPVFQFRNCRLQNLALWSG*SALHPN Trigger: GTTTGGATGTAAAGCGCTGCAACCAGACCACAGGGC...TAGATTTTGAAGTCTGCAATTGCGAAACTGGAACACAGGCTGCATTCTCCAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR CCA 90 bp | AATTGTTCCAGCATCGGGCTTTGCAGAGGACTCGTGGCATTGGGTGATAATGTCCTTTGGAGTTTTAATTaGGTCCACATGGCCATGACA | + |
|
Preference number: 4 (lower is better) Translates to: NCSSIGLCRGLVALGDNVLWSFN*VHMAMT Trigger: TGTCATGGCCATGTGGACCCAATTAAAACTCCAAAG...GACATTATCACCCAATGCCACGAGTCCTCTGCAAAGCCCGATGCTGGAACAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR CCA 90 bp | AAGGGCTCTATTAGAAGCATCCACAAATGGGAATTTCCATTCCAGTCTTCTAGGCCGACACATCTGCATTaGGGATGCTGTCATGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: KGSIRSIHKWEFPFQSSRPTHLH*GCCHGS Trigger: GCTACCATGACAGCATCCCCAATGCAGATGTGTCGG...CCTAGAAGACTGGAATGGAAATTCCCATTTGTGGATGCTTCTAATAGAGCCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR GCA 90 bp | GTCTGGAGAATGCAGCCTGTGTTCCAGTTTCGCAATTGCAGACTTCAAAATCTAACTGCAAAGATAGTCTaGAGGGTTGTGGGGGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VWRMQPVFQFRNCRLQNLTAKIV*RVVGAK Trigger: TTTTGCCCCCACAACCCTGCAGACTATCTTTGCAGT...TAGATTTTGAAGTCTGCAATTGCGAAACTGGAACACAGGCTGCATTCTCCAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR CCA 90 bp | AAGGGCTCTATTAGAAGCATCCACAAATGGGAATTTCCATTCCAGTCTTCTAGGGGGTGGGCACTGATGTaGTCAAAGAGGCATTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KGSIRSIHKWEFPFQSSRGWALM*SKRHWK Trigger: TTTCCAATGCCTCTTTGACCACATCAGTGCCCACCC...CCTAGAAGACTGGAATGGAAATTCCCATTTGTGGATGCTTCTAATAGAGCCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR TCA 90 bp | AAGGGCTCTATTAGAAGCATCCACAAATGGGAATTTCCATTCCAGTCTTCTAGGTGTTATGAAGGCAGTTaGTGCACTCACCACTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KGSIRSIHKWEFPFQSSRCYEGS*CTHHSQ Trigger: CTGAGAGTGGTGAGTGCATCAACTGCCTTCATAACA...CCTAGAAGACTGGAATGGAAATTCCCATTTGTGGATGCTTCTAATAGAGCCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR GCA 90 bp | AATTGTTCCAGCATCGGGCTTTGCAGAGGACTCGTGGCATTGGGTGATAATGTCGATAAAATCCTTCTTTaGATTCTTCACAGTGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NCSSIGLCRGLVALGDNVDKILL*ILHSVP Trigger: GGGAACACTGTGAAGAATGCAAAGAAGGATTTTATC...GACATTATCACCCAATGCCACGAGTCCTCTGCAAAGCCCGATGCTGGAACAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR CCA 90 bp | AATTGTTCCAGCATCGGGCTTTGCAGAGGACTCGTGGCATTGGGTGATAATGTCATGATGATGTTAAACTaGGTCCATGATACATCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NCSSIGLCRGLVALGDNVMMMLN*VHDTSA Trigger: TGCTGATGTATCATGGACCCAGTTTAACATCATCAT...GACATTATCACCCAATGCCACGAGTCCTCTGCAAAGCCCGATGCTGGAACAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR CCA 90 bp | AAGGGCTCTATTAGAAGCATCCACAAATGGGAATTTCCATTCCAGTCTTCTAGGTGGGAGCCACTTCATTaGCATCGTCCTCTAACAATC | + |
|
Preference number: 4 (lower is better) Translates to: KGSIRSIHKWEFPFQSSRWEPLH*HRPLTI Trigger: GATTGTTAGAGGACGATGCCAATGAAGTGGCTCCCA...CCTAGAAGACTGGAATGGAAATTCCCATTTGTGGATGCTTCTAATAGAGCCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| 3UTR CAA 72 bp | GACAGGCTAAGCGCACTACAGTTTGTACCTGAACATTaGCACAATACCTTTCTCAACAAACTCTACCTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: DRLSALQFVPEH*HNTFLNKLYLG Trigger: GCCTAGGTAGAGTTTGTTGAGAAAGGTATTGTGCAAATGTTCAGGTACAAACTGTAGTGCGCTTAGCCTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR GCA 90 bp | AAGGGCTCTATTAGAAGCATCCACAAATGGGAATTTCCATTCCAGTCTTCTAGGGAACAGTTACACATATaGTCTGGGGGAGGAGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: KGSIRSIHKWEFPFQSSREQLHI*SGGGEV Trigger: TACTTCTCCTCCCCCAGAGCATATGTGTAACTGTTC...CCTAGAAGACTGGAATGGAAATTCCCATTTGTGGATGCTTCTAATAGAGCCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR GCA 90 bp | AAGGGCTCTATTAGAAGCATCCACAAATGGGAATTTCCATTCCAGTCTTCTAGGGACATTCGCACTGTGTaGAGATGCTGTCAGAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: KGSIRSIHKWEFPFQSSRDIRTV*RCCQNC Trigger: ACAATTCTGACAGCATCTGCACACAGTGCGAATGTC...CCTAGAAGACTGGAATGGAAATTCCCATTTGTGGATGCTTCTAATAGAGCCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR GCA 90 bp | GTCTGGAGAATGCAGCCTGTGTTCCAGTTTCGCAATTGCAGACTTCAAAATCTATTCAGAAGAGCTTACTaGAAAGATAGTCTGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VWRMQPVFQFRNCRLQNLFRRAY*KDSLQG Trigger: ACCCTGCAGACTATCTTTGCAGTAAGCTCTTCTGAA...TAGATTTTGAAGTCTGCAATTGCGAAACTGGAACACAGGCTGCATTCTCCAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR CCA 90 bp | AAGGGCTCTATTAGAAGCATCCACAAATGGGAATTTCCATTCCAGTCTTCTAGGACACCCACTTTGCATTaGCAATTCCCAGAACTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: KGSIRSIHKWEFPFQSSRTPTLH*QFPELL Trigger: TAACAGTTCTGGGAATTGCCAATGCAAAGTGGGTGT...CCTAGAAGACTGGAATGGAAATTCCCATTTGTGGATGCTTCTAATAGAGCCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR CCA 90 bp | GTCTGGAGAATGCAGCCTGTGTTCCAGTTTCGCAATTGCAGACTTCAAAATCTAAGGCTTGCAAATCTTTaGAGTTTTAATTGGGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VWRMQPVFQFRNCRLQNLRLANL*SFNWVH Trigger: GTGGACCCAATTAAAACTCCAAAGATTTGCAAGCCT...TAGATTTTGAAGTCTGCAATTGCGAAACTGGAACACAGGCTGCATTCTCCAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR CCA 90 bp | GTCTGGAGAATGCAGCCTGTGTTCCAGTTTCGCAATTGCAGACTTCAAAATCTATTGAGTTTCCGATTTTaGTACTCTCGGTACATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VWRMQPVFQFRNCRLQNLLSFRF*YSRYMY Trigger: GTACATGTACCGAGAGTACCAAAATCGGAAACTCAA...TAGATTTTGAAGTCTGCAATTGCGAAACTGGAACACAGGCTGCATTCTCCAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| 3UTR CAA 72 bp | TTCAGGTTAATCACCATGTTCCTGCTGCTTAGCCATTaGCTCAGAGTGATAGCAAAAGACAAATTAACCGTC | + |
|
Preference number: 4 (lower is better) Translates to: FRLITMFLLLSH*LRVIAKDKLTV Trigger: GACGGTTAATTTGTCTTTTGCTATCACTCTGAGCAAATGGCTAAGCAGCAGGAACATGGTGATTAACCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR CCA 90 bp | GTCTGGAGAATGCAGCCTGTGTTCCAGTTTCGCAATTGCAGACTTCAAAATCTAAGAACCTTCAGGAGTTaGAACAATAACTTCTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VWRMQPVFQFRNCRLQNLRTFRS*NNNFLL Trigger: AAGCAAGAAGTTATTGTTCCAACTCCTGAAGGTTCT...TAGATTTTGAAGTCTGCAATTGCGAAACTGGAACACAGGCTGCATTCTCCAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| 3UTR CAA 72 bp | TATTCTGAATATGAATATTTTGTCAGAGAGCTTTCCTaGAAAGATGCAGAAACCCACCTCCTACCCACACAC | + |
|
Preference number: 4 (lower is better) Translates to: YSEYEYFVRELS*KDAETHLLPTH Trigger: GTGTGTGGGTAGGAGGTGGGTTTCTGCATCTTTCAAGGAAAGCTCTCTGACAAAATATTCATATTCAGAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| 3UTR CAA 72 bp | GTGTTCCAGTTTCGCAATTGCAGACTTCAAAATCTATaGCTTGAATCTATGGTAAGTCAAAGAGCATATGAC | + |
|
Preference number: 4 (lower is better) Translates to: VFQFRNCRLQNL*LESMVSQRAYD Trigger: GTCATATGCTCTTTGACTTACCATAGATTCAAGCAATAGATTTTGAAGTCTGCAATTGCGAAACTGGAACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| 3UTR CAA 72 bp | TATTTTGATAGAAATCTCAGTGAACAGCACATAAGTTaGATAGAAATCTCAGGAAGTGGCACAGAAGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: YFDRNLSEQHIS*IEISGSGTEDK Trigger: TTTGTCTTCTGTGCCACTTCCTGAGATTTCTATCAAACTTATGTGCTGTTCACTGAGATTTCTATCAAAATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| 3UTR CAA 72 bp | TTATTGTTGAGAATAGCTTTTGCTATCCTAGGTTTTTaGTTATTCCAGATGAATGGATGCCAACAAGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLLRIAFAILGF*LFQMNGCQQEL Trigger: AAGCTCTTGTTGGCATCCATTCATCTGGAATAACAAAAAACCTAGGATAGCAAAAGCTATTCTCAACAATAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS TCA 90 bp | GGCTGGGCGACGGGACCACCTGCCCCTCGGCCCCGCCGCCACCGGTaGCATTCCCTGCCGAGGCTGTGGAAGCGGCTGCGGCGGCCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GWATGPPAPRPRRHR*HSLPRLWKRLRRPR Trigger: GCGCGGCCGCCGCAGCCGCTTCCACAGCCTCGGCAGGGAATGTCACCGGTGGCGGCGGGGCCGAGGGGCAGGTGGTCCCGTCGCCCAGCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037881.3 ENSMUST00000107359.9 |
||
| CDS GCA 90 bp | CTGCTGGCTTGGTCCCGAAGCCCCGGGCTGGGCGACGGGACCACCTaGCCCTCGGCCCCGCCGCCACCGGTGACATTCCCTGCCGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LLAWSRSPGLGDGTT*PSAPPPPVTFPAEA Trigger: AGCCTCGGCAGGGAATGTCACCGGTGGCGGCGGGGCCGAGGGGCAGGTGGTCCCGTCGCCCAGCCCGGGGCTTCGGGACCAAGCCAGCAG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037881.3 ENSMUST00000107359.9 |
||
| CDS TCA 90 bp | GCCAACTGTGCTCGCAAGGGTGGTGGGCGCGGGTCTGGAGGGTGGTaGTTCCGTGGTGGGAGTGTGTCCGTCCTCCGAAGGGGTGGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: ANCARKGGGRGSGGW*FRGGSVSVLRRGGG Trigger: CCCGCCACCCCTTCGGAGGACGGACACACTCCCACCACGGAATCACCACCCTCCAGACCCGCGCCCACCACCCTTGCGAGCACAGTTGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037881.3 ENSMUST00000107359.9 |
||
| CDS CCA 90 bp | TCGCAAGGGTGGTGGGCGCGGGTCTGGAGGGTGGTGATTCCGTGGTaGGAGTGTGTCCGTCCTCCGAAGGGGTGGCGGGCGAGAGGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SQGWWARVWRVVIPW*ECVRPPKGWRARGP Trigger: TGGACCTCTCGCCCGCCACCCCTTCGGAGGACGGACACACTCCCACCACGGAATCACCACCCTCCAGACCCGCGCCCACCACCCTTGCGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037881.3 ENSMUST00000107359.9 |
||
| CDS CCA 90 bp | TGCTCGCAAGGGTGGTGGGCGCGGGTCTGGAGGGTGGTGATTCCGTaGTGGGAGTGTGTCCGTCCTCCGAAGGGGTGGCGGGCGAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: CSQGWWARVWRVVIP*WECVRPPKGWRARG Trigger: ACCTCTCGCCCGCCACCCCTTCGGAGGACGGACACACTCCCACCACGGAATCACCACCCTCCAGACCCGCGCCCACCACCCTTGCGAGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037881.3 ENSMUST00000107359.9 |
||
| CDS CCA 90 bp | TCGGCGGCTGGCCAACTGTGCTCGCAAGGGTGGTGGGCGCGGGTCTaGAGGGTGGTGATTCCGTGGTGGGAGTGTGTCCGTCCTCCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SAAGQLCSQGWWARV*RVVIPWWECVRPPK Trigger: CTTCGGAGGACGGACACACTCCCACCACGGAATCACCACCCTCCAGACCCGCGCCCACCACCCTTGCGAGCACAGTTGGCCAGCCGCCGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037881.3 ENSMUST00000107359.9 |
||
| CDS TCA 90 bp | CTGTCCGGGGACTCGGCAGTTGGGGTCCCTGGAGTGCTGGAAGCCTaGGCGGTGGTGACTACAGAGGTGGTCGGCGGCTGGCCAACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LSGDSAVGVPGVLEA*AVVTTEVVGGWPTV Trigger: CACAGTTGGCCAGCCGCCGACCACCTCTGTAGTCACCACCGCTCAGGCTTCCAGCACTCCAGGGACCCCAACTGCCGAGTCCCCGGACAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037881.3 ENSMUST00000107359.9 |
||
| CDS CCA 90 bp | CTACAGAGGTGGTCGGCGGCTGGCCAACTGTGCTCGCAAGGGTGGTaGGCGCGGGTCTGGAGGGTGGTGATTCCGTGGTGGGAGTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LQRWSAAGQLCSQGW*ARVWRVVIPWWECV Trigger: GACACACTCCCACCACGGAATCACCACCCTCCAGACCCGCGCCCACCACCCTTGCGAGCACAGTTGGCCAGCCGCCGACCACCTCTGTAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037881.3 ENSMUST00000107359.9 |
||
| CDS TCA 90 bp | ACTCGGCAGTTGGGGTCCCTGGAGTGCTGGAAGCCTGAGCGGTGGTaGCTACAGAGGTGGTCGGCGGCTGGCCAACTGTGCTCGCAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TRQLGSLECWKPERW*LQRWSAAGQLCSQG Trigger: CCCTTGCGAGCACAGTTGGCCAGCCGCCGACCACCTCTGTAGTCACCACCGCTCAGGCTTCCAGCACTCCAGGGACCCCAACTGCCGAGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037881.3 ENSMUST00000107359.9 |
||
| CDS-3UTR CAA 90 bp | AGCAGTCCTTTGAGAGGCCAGGTAGACTTAGGCTGCTCTGTGGGATTCAGCCTTGGGGGTGGCAGCGGGTaGTGCGCTGGTGCGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSPLRGQVDLGCSVGFSLGGGSG*CAGAKR Trigger: CCTCTTCGCACCAGCGCACAACCCGCTGCCACCCCC...AAGGCTGAATCCCACAGAGCAGCCTAAGTCTACCTGGCCTCTCAAAGGACTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR CAA 90 bp | AGCAGTCCTTTGAGAGGCCAGGTAGACTTAGGCTGCTCTGTGGGATTCAGCCTTCCGGGGACTCGGCAGTaGGGGTCCCTGGAGTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSPLRGQVDLGCSVGFSLPGTRQ*GSLECW Trigger: CCAGCACTCCAGGGACCCCAACTGCCGAGTCCCCGG...AAGGCTGAATCCCACAGAGCAGCCTAAGTCTACCTGGCCTCTCAAAGGACTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS CCA 90 bp | CTTTACATCCAAACTTCCAACCTCAGAACAGTTACACATATGCTCTaGGGGAGGAGAAGTAGGGGCTTCGGTGACAGGTGCGGTGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LYIQTSNLRTVTHML*GRRSRGFGDRCGGR Trigger: CCGCCCACCGCACCTGTCACCGAAGCCCCTACTTCTCCTCCCCCAGAGCATATGTGTAACTGTTCTGAGGTTGGAAGTTTGGATGTAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037881.3 ENSMUST00000107359.9 |
||
| CDS GCA 90 bp | CTCCAACTCTCCAGATTCAATGGTGCAATTGCCTGTAGAAGTCACTaGGGAACACGGGCAGCGATGGCACTGTTTTGCGGCATCAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: LQLSRFNGAIACRSH*GTRAAMALFCGIRT Trigger: AGTCCTGATGCCGCAAAACAGTGCCATCGCTGCCCGTGTTCCGCAGTGACTTCTACAGGCAATTGCACCATTGAATCTGGAGAGTTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR CAA 90 bp | AGCAGTCCTTTGAGAGGCCAGGTAGACTTAGGCTGCTCTGTGGGATTCAGCCTTCCGGTGACACCCACTTaGCATTGGCAATTCCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SSPLRGQVDLGCSVGFSLPVTPT*HWQFPE Trigger: TTCTGGGAATTGCCAATGCAAAGTGGGTGTCACCGG...AAGGCTGAATCCCACAGAGCAGCCTAAGTCTACCTGGCCTCTCAAAGGACTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR CAA 90 bp | AATTGTTCCAGCATCGGGCTTTGCAGAGGACTCGTGGCATTGGGTGATAATGTCAGGGTCAGCTGCCCATaGGGAGCCACTTCATTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: NCSSIGLCRGLVALGDNVRVSCP*GATSLA Trigger: TGCCAATGAAGTGGCTCCCAATGGGCAGCTGACCCT...GACATTATCACCCAATGCCACGAGTCCTCTGCAAAGCCCGATGCTGGAACAATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR CAA 90 bp | AATTGTTCCAGCATCGGGCTTTGCAGAGGACTCGTGGCATTGGGTGATAATGTCTGCCCTGTGGTCTGGTaGCAGCGCTTTACATCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: NCSSIGLCRGLVALGDNVCPVVW*QRFTSK Trigger: TTTGGATGTAAAGCGCTGCAACCAGACCACAGGGCA...GACATTATCACCCAATGCCACGAGTCCTCTGCAAAGCCCGATGCTGGAACAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR CAA 90 bp | AATTGTTCCAGCATCGGGCTTTGCAGAGGACTCGTGGCATTGGGTGATAATGTCTGTCCATCTTGGCATTaGTCACACATGGAGCCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: NCSSIGLCRGLVALGDNVCPSWH*SHMEPV Trigger: CACCGGCTCCATGTGTGACAAATGCCAAGATGGACA...GACATTATCACCCAATGCCACGAGTCCTCTGCAAAGCCCGATGCTGGAACAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR CAA 90 bp | AATTGTTCCAGCATCGGGCTTTGCAGAGGACTCGTGGCATTGGGTGATAATGTCCAACTATCAGACCGGTaGTTGCACTGGCAAGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: NCSSIGLCRGLVALGDNVQLSDR*LHWQGK Trigger: CTTGCCTTGCCAGTGCAACAACCGGTCTGATAGTTG...GACATTATCACCCAATGCCACGAGTCCTCTGCAAAGCCCGATGCTGGAACAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR CAA 90 bp | AGCAGTCCTTTGAGAGGCCAGGTAGACTTAGGCTGCTCTGTGGGATTCAGCCTTTTGGGAGCCACTTCATaGGCATCGTCCTCTAACAAT | + |
|
Preference number: 5 (lower is better) Translates to: SSPLRGQVDLGCSVGFSLLGATS*ASSSNN Trigger: ATTGTTAGAGGACGATGCCAATGAAGTGGCTCCCAA...AAGGCTGAATCCCACAGAGCAGCCTAAGTCTACCTGGCCTCTCAAAGGACTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS CCA 90 bp | CACAGTGAAGACCCTGATAACCCACATGACAATCACACTGCCCTGTaGTCTGGTTGCAGCGCTTTACATCCAAACTTCCAACCTCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: HSEDPDNPHDNHTAL*SGCSALHPNFQPQN Trigger: GTTCTGAGGTTGGAAGTTTGGATGTAAAGCGCTGCAACCAGACCACAGGGCAGTGTGATTGTCATGTGGGTTATCAGGGTCTTCACTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037881.3 ENSMUST00000107359.9 |
||
| CDS GCA 90 bp | ATGGCAGGCAGAGACCAACAGTGTGATTCAGGTAAAAGCCCTCTTTaGAGGTGTCACAGTGAAGACCCTGATAACCCACATGACAATCAC | + |
|
Preference number: 5 (lower is better) Translates to: MAGRDQQCDSGKSPL*RCHSEDPDNPHDNH Trigger: GTGATTGTCATGTGGGTTATCAGGGTCTTCACTGTGACACCTGCAAAGAGGGCTTTTACCTGAATCACACTGTTGGTCTCTGCCTGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037881.3 ENSMUST00000107359.9 |
||
| CDS CCA 90 bp | GATGCACTCACCACTCTCAGGCTTGCAAATCTTTGGAGTTTTAATTaGGTCCACATGGCCATGACATTCGCACTGTGTGCAGATGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: DALTTLRLANLWSFN*VHMAMTFALCADAV Trigger: GACAGCATCTGCACACAGTGCGAATGTCATGGCCATGTGGACCCAATTAAAACTCCAAAGATTTGCAAGCCTGAGAGTGGTGAGTGCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR CAA 90 bp | GTCTGGAGAATGCAGCCTGTGTTCCAGTTTCGCAATTGCAGACTTCAAAATCTAAGCGATGGCACTGTTTaGCGGCATCAGGACTCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: VWRMQPVFQFRNCRLQNLSDGTV*RHQDSD Trigger: ATCCGAGTCCTGATGCCGCAAAACAGTGCCATCGCT...TAGATTTTGAAGTCTGCAATTGCGAAACTGGAACACAGGCTGCATTCTCCAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR CAA 90 bp | AATTGTTCCAGCATCGGGCTTTGCAGAGGACTCGTGGCATTGGGTGATAATGTCGATTCAATGGTGCAATaGCCTGTAGAAGTCACTGCG | + |
|
Preference number: 5 (lower is better) Translates to: NCSSIGLCRGLVALGDNVDSMVQ*PVEVTA Trigger: CGCAGTGACTTCTACAGGCAATTGCACCATTGAATC...GACATTATCACCCAATGCCACGAGTCCTCTGCAAAGCCCGATGCTGGAACAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS GCA 90 bp | TTAGACAAGCACCTGTGTGAACATCACAACTATCAGACCGGTTGTTaGACTGGCAAGGCAAGCAGCCTGTCTTACCAAAGCCATAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: LDKHLCEHHNYQTGC*TGKASSLSYQSHNV Trigger: GACATTATGGCTTTGGTAAGACAGGCTGCTTGCCTTGCCAGTGCAACAACCGGTCTGATAGTTGTGATGTTCACACAGGTGCTTGTCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR CAA 90 bp | AATTGTTCCAGCATCGGGCTTTGCAGAGGACTCGTGGCATTGGGTGATAATGTCGCCATAATGTCCATCTaGGCATTTGTCACACATGGA | + |
|
Preference number: 5 (lower is better) Translates to: NCSSIGLCRGLVALGDNVAIMSI*AFVTHG Trigger: TCCATGTGTGACAAATGCCAAGATGGACATTATGGC...GACATTATCACCCAATGCCACGAGTCCTCTGCAAAGCCCGATGCTGGAACAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR CAA 90 bp | AATTGTTCCAGCATCGGGCTTTGCAGAGGACTCGTGGCATTGGGTGATAATGTCGTCCAAAAGGGAGCATaGAGTTTCCGATTTTGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: NCSSIGLCRGLVALGDNVVQKGA*SFRFWY Trigger: GTACCAAAATCGGAAACTCAATGCTCCCTTTTGGAC...GACATTATCACCCAATGCCACGAGTCCTCTGCAAAGCCCGATGCTGGAACAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS TCA 90 bp | TGTTCCCCTTTACTATTTTCCTGGCAGTTTAGACAAGCACCTGTGTaGACATCACAACTATCAGACCGGTTGTTGCACTGGCAAGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: CSPLLFSWQFRQAPV*TSQLSDRLLHWQGK Trigger: CTTGCCTTGCCAGTGCAACAACCGGTCTGATAGTTGTGATGTTCACACAGGTGCTTGTCTAAACTGCCAGGAAAATAGTAAAGGGGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS CCA 90 bp | ATGAAGGCAGTTGATGCACTCACCACTCTCAGGCTTGCAAATCTTTaGAGTTTTAATTGGGTCCACATGGCCATGACATTCGCACTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: MKAVDALTTLRLANL*SFNWVHMAMTFALC Trigger: ACACAGTGCGAATGTCATGGCCATGTGGACCCAATTAAAACTCCAAAGATTTGCAAGCCTGAGAGTGGTGAGTGCATCAACTGCCTTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR CAA 90 bp | AATTGTTCCAGCATCGGGCTTTGCAGAGGACTCGTGGCATTGGGTGATAATGTCTCACCACTCTCAGGCTaGCAAATCTTTGGAGTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: NCSSIGLCRGLVALGDNVSPLSG*QIFGVL Trigger: TAAAACTCCAAAGATTTGCAAGCCTGAGAGTGGTGA...GACATTATCACCCAATGCCACGAGTCCTCTGCAAAGCCCGATGCTGGAACAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS CCA 90 bp | TCTTTCAGCTCGATGGTCCAAAAGGGAGCATTGAGTTTCCGATTTTaGTACTCTCGGTACATGTACACAGCTCCTACAAATCCCATTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SFSSMVQKGALSFRF*YSRYMYTAPTNPIS Trigger: GCTAATGGGATTTGTAGGAGCTGTGTACATGTACCGAGAGTACCAAAATCGGAAACTCAATGCTCCCTTTTGGACCATCGAGCTGAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR CAA 90 bp | AATTGTTCCAGCATCGGGCTTTGCAGAGGACTCGTGGCATTGGGTGATAATGTCATTGAGTTTCCGATTTaGGTACTCTCGGTACATGTA | + |
|
Preference number: 5 (lower is better) Translates to: NCSSIGLCRGLVALGDNVIEFPI*VLSVHV Trigger: TACATGTACCGAGAGTACCAAAATCGGAAACTCAAT...GACATTATCACCCAATGCCACGAGTCCTCTGCAAAGCCCGATGCTGGAACAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR CAA 90 bp | GTCTGGAGAATGCAGCCTGTGTTCCAGTTTCGCAATTGCAGACTTCAAAATCTACTGCTGAAACTGATATaGTCTTCTTTCAGCTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: VWRMQPVFQFRNCRLQNLLLKLI*SSFSSM Trigger: CATCGAGCTGAAAGAAGACAATATCAGTTTCAGCAG...TAGATTTTGAAGTCTGCAATTGCGAAACTGGAACACAGGCTGCATTCTCCAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR CAA 90 bp | AAGGGCTCTATTAGAAGCATCCACAAATGGGAATTTCCATTCCAGTCTTCTAGGGTAACCATCTTTACATaGGTCACATGTAGGCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: KGSIRSIHKWEFPFQSSRVTIFT*VTCRLQ Trigger: TTGGAGCCTACATGTGACCAATGTAAAGATGGTTAC...CCTAGAAGACTGGAATGGAAATTCCCATTTGTGGATGCTTCTAATAGAGCCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS-3UTR CAA 90 bp | GTCTGGAGAATGCAGCCTGTGTTCCAGTTTCGCAATTGCAGACTTCAAAATCTATGGAACAATAACTTCTaGCTTGATGCAGTTTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VWRMQPVFQFRNCRLQNLWNNNF*LDAVSL Trigger: CAGAGAAACTGCATCAAGCAAGAAGTTATTGTTCCA...TAGATTTTGAAGTCTGCAATTGCGAAACTGGAACACAGGCTGCATTCTCCAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS GCA 72 bp | TGGTCCCGAAGCCCCGGGCTGGGCGACGGGACCACCTaGCCCTCGGCCCCGCCGCCACCGGTGACATTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: WSRSPGLGDGTT*PSAPPPPVTFP Trigger: AGGGAATGTCACCGGTGGCGGCGGGGCCGAGGGGCAGGTGGTCCCGTCGCCCAGCCCGGGGCTTCGGGACCA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037881.3 ENSMUST00000107359.9 |
||
| CDS GCA 72 bp | ACCGGTGACATTCCCTGCCGAGGCTGTGGAAGCGGCTaGGGCGGCCGCGCAGCACAACAGGGCGAGGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: TGDIPCRGCGSG*GGRAAQQGEAA Trigger: GGCGGCCTCGCCCTGTTGTGCTGCGCGGCCGCCGCAGCCGCTTCCACAGCCTCGGCAGGGAATGTCACCGGT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037881.3 ENSMUST00000107359.9 |
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| CDS CCA 72 bp | GTGGGAGCCGCGGTCTTAGGGAAGGGGCTGCTGGCTTaGTCCCGAAGCCCCGGGCTGGGCGACGGGACCACC | + |
|
Preference number: 6 (lower is better) Translates to: VGAAVLGKGLLA*SRSPGLGDGTT Trigger: GGTGGTCCCGTCGCCCAGCCCGGGGCTTCGGGACCAAGCCAGCAGCCCCTTCCCTAAGACCGCGGCTCCCAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037881.3 ENSMUST00000107359.9 |
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| CDS CAA 72 bp | GGTGGGAGCCGCGGTCTTAGGGAAGGGGCTGCTGGCTaGGTCCCGAAGCCCCGGGCTGGGCGACGGGACCAC | + |
|
Preference number: 6 (lower is better) Translates to: GGSRGLREGAAG*VPKPRAGRRDH Trigger: GTGGTCCCGTCGCCCAGCCCGGGGCTTCGGGACCAAGCCAGCAGCCCCTTCCCTAAGACCGCGGCTCCCACC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037881.3 ENSMUST00000107359.9 |
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| CDS CAA 90 bp | GGTGGCGGGCGAGAGGTCCAGAGCCGGGAAGGGGGTGGCAGCGGGTaGTGCGCTGGTGCGAAGAGGAGGAATGATCTCCGGGGAGCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: GGGREVQSREGGGSG*CAGAKRRNDLRGAG Trigger: GCCGGCTCCCCGGAGATCATTCCTCCTCTTCGCACCAGCGCACAACCCGCTGCCACCCCCTTCCCGGCTCTGGACCTCTCGCCCGCCACC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037881.3 ENSMUST00000107359.9 |
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| CDS CCA 72 bp | GGGTGGCGGGCGAGAGGTCCAGAGCCGGGAAGGGGGTaGCAGCGGGTTGTGCGCTGGTGCGAAGAGGAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: GWRARGPEPGRG*QRVVRWCEEEE Trigger: TTCCTCCTCTTCGCACCAGCGCACAACCCGCTGCCACCCCCTTCCCGGCTCTGGACCTCTCGCCCGCCACCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037881.3 ENSMUST00000107359.9 |
||
| CDS CCA 72 bp | TGGTCGGCGGCTGGCCAACTGTGCTCGCAAGGGTGGTaGGCGCGGGTCTGGAGGGTGGTGATTCCGTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: WSAAGQLCSQGW*ARVWRVVIPWW Trigger: CCACCACGGAATCACCACCCTCCAGACCCGCGCCCACCACCCTTGCGAGCACAGTTGGCCAGCCGCCGACCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037881.3 ENSMUST00000107359.9 |
||
| CDS CCA 72 bp | AGGTGGTCGGCGGCTGGCCAACTGTGCTCGCAAGGGTaGTGGGCGCGGGTCTGGAGGGTGGTGATTCCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RWSAAGQLCSQG*WARVWRVVIPW Trigger: CCACGGAATCACCACCCTCCAGACCCGCGCCCACCACCCTTGCGAGCACAGTTGGCCAGCCGCCGACCACCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037881.3 ENSMUST00000107359.9 |
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| CDS TCA 72 bp | GCTCGCAAGGGTGGTGGGCGCGGGTCTGGAGGGTGGTaGTTCCGTGGTGGGAGTGTGTCCGTCCTCCGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: ARKGGGRGSGGW*FRGGSVSVLRR Trigger: CCTTCGGAGGACGGACACACTCCCACCACGGAATCACCACCCTCCAGACCCGCGCCCACCACCCTTGCGAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037881.3 ENSMUST00000107359.9 |
||
| CDS TCA 72 bp | GACTCGGCAGTTGGGGTCCCTGGAGTGCTGGAAGCCTaGGCGGTGGTGACTACAGAGGTGGTCGGCGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: DSAVGVPGVLEA*AVVTTEVVGGW Trigger: CCAGCCGCCGACCACCTCTGTAGTCACCACCGCTCAGGCTTCCAGCACTCCAGGGACCCCAACTGCCGAGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037881.3 ENSMUST00000107359.9 |
||
| CDS GCA 72 bp | GAGGTCCAGAGCCGGGAAGGGGGTGGCAGCGGGTTGTaGGCTGGTGCGAAGAGGAGGAATGATCTCCGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: EVQSREGGGSGL*AGAKRRNDLRG Trigger: TCCCCGGAGATCATTCCTCCTCTTCGCACCAGCGCACAACCCGCTGCCACCCCCTTCCCGGCTCTGGACCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037881.3 ENSMUST00000107359.9 |
||
| CDS CCA 72 bp | GGCCAACTGTGCTCGCAAGGGTGGTGGGCGCGGGTCTaGAGGGTGGTGATTCCGTGGTGGGAGTGTGTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: GQLCSQGWWARV*RVVIPWWECVR Trigger: ACGGACACACTCCCACCACGGAATCACCACCCTCCAGACCCGCGCCCACCACCCTTGCGAGCACAGTTGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037881.3 ENSMUST00000107359.9 |
||
| CDS CAA 72 bp | CGAGAGGTCCAGAGCCGGGAAGGGGGTGGCAGCGGGTaGTGCGCTGGTGCGAAGAGGAGGAATGATCTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: REVQSREGGGSG*CAGAKRRNDLR Trigger: CCGGAGATCATTCCTCCTCTTCGCACCAGCGCACAACCCGCTGCCACCCCCTTCCCGGCTCTGGACCTCTCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037881.3 ENSMUST00000107359.9 |
||
| CDS TCA 72 bp | TTGGGGTCCCTGGAGTGCTGGAAGCCTGAGCGGTGGTaGCTACAGAGGTGGTCGGCGGCTGGCCAACTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LGSLECWKPERW*LQRWSAAGQLC Trigger: GCACAGTTGGCCAGCCGCCGACCACCTCTGTAGTCACCACCGCTCAGGCTTCCAGCACTCCAGGGACCCCAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037881.3 ENSMUST00000107359.9 |
||
| CDS CAA 72 bp | CGCTACTGTTGCTGCTTCTGTCCGGGGACTCGGCAGTaGGGGTCCCTGGAGTGCTGGAAGCCTGAGCGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RYCCCFCPGTRQ*GSLECWKPERW Trigger: CCACCGCTCAGGCTTCCAGCACTCCAGGGACCCCAACTGCCGAGTCCCCGGACAGAAGCAGCAACAGTAGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037881.3 ENSMUST00000107359.9 |
||
| CDS GCA 72 bp | CTCTGGGGGAGGAGAAGTAGGGGCTTCGGTGACAGGTaGGGTGGGCGGGACTCCGCTACTGTTGCTGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LWGRRSRGFGDR*GGRDSATVAAS Trigger: AGAAGCAGCAACAGTAGCGGAGTCCCGCCCACCGCACCTGTCACCGAAGCCCCTACTTCTCCTCCCCCAGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037881.3 ENSMUST00000107359.9 |
||
| CDS CCA 72 bp | GCTGCTTCTGTCCGGGGACTCGGCAGTTGGGGTCCCTaGAGTGCTGGAAGCCTGAGCGGTGGTGACTACAGA | + |
|
Preference number: 6 (lower is better) Translates to: AASVRGLGSWGP*SAGSLSGGDYR Trigger: TCTGTAGTCACCACCGCTCAGGCTTCCAGCACTCCAGGGACCCCAACTGCCGAGTCCCCGGACAGAAGCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037881.3 ENSMUST00000107359.9 |
||
| CDS CCA 72 bp | GCTACTGTTGCTGCTTCTGTCCGGGGACTCGGCAGTTaGGGTCCCTGGAGTGCTGGAAGCCTGAGCGGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: ATVAASVRGLGS*GPWSAGSLSGG Trigger: ACCACCGCTCAGGCTTCCAGCACTCCAGGGACCCCAACTGCCGAGTCCCCGGACAGAAGCAGCAACAGTAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037881.3 ENSMUST00000107359.9 |
||
| CDS CAA 72 bp | GTTGTCAGGGTCAGCTGCCCATTGGGAGCCACTTCATaGGCATCGTCCTCTAACAATCCCGACACATCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: VVRVSCPLGATS*ASSSNNPDTSA Trigger: TGCAGATGTGTCGGGATTGTTAGAGGACGATGCCAATGAAGTGGCTCCCAATGGGCAGCTGACCCTGACAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS GCA 72 bp | AGTCACTGCGGAACACGGGCAGCGATGGCACTGTTTTaGGGCATCAGGACTCGGATAAAATCCTTCTTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SHCGTRAAMALF*GIRTRIKSFFA Trigger: TGCAAAGAAGGATTTTATCCGAGTCCTGATGCCGCAAAACAGTGCCATCGCTGCCCGTGTTCCGCAGTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS CCA 72 bp | TTGTCAGGGTCAGCTGCCCATTGGGAGCCACTTCATTaGCATCGTCCTCTAACAATCCCGACACATCTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: LSGSAAHWEPLH*HRPLTIPTHLH Trigger: ATGCAGATGTGTCGGGATTGTTAGAGGACGATGCCAATGAAGTGGCTCCCAATGGGCAGCTGACCCTGACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS CAA 72 bp | AAGTCACTGCGGAACACGGGCAGCGATGGCACTGTTTaGCGGCATCAGGACTCGGATAAAATCCTTCTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: KSLRNTGSDGTV*RHQDSDKILLC Trigger: GCAAAGAAGGATTTTATCCGAGTCCTGATGCCGCAAAACAGTGCCATCGCTGCCCGTGTTCCGCAGTGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS CAA 72 bp | CATGTAGGCTCCAACTCTCCAGATTCAATGGTGCAATaGCCTGTAGAAGTCACTGCGGAACACGGGCAGCGA | + |
|
Preference number: 6 (lower is better) Translates to: HVGSNSPDSMVQ*PVEVTAEHGQR Trigger: TCGCTGCCCGTGTTCCGCAGTGACTTCTACAGGCAATTGCACCATTGAATCTGGAGAGTTGGAGCCTACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS CAA 90 bp | CATTGGTCACATGTAGGCTCCAACTCTCCAGATTCAATGGTGCAATaGCCTGTAGAAGTCACTGCGGAACACGGGCAGCGATGGCACTGT | + |
|
Preference number: 6 (lower is better) Translates to: HWSHVGSNSPDSMVQ*PVEVTAEHGQRWHC Trigger: ACAGTGCCATCGCTGCCCGTGTTCCGCAGTGACTTCTACAGGCAATTGCACCATTGAATCTGGAGAGTTGGAGCCTACATGTGACCAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS CAA 90 bp | CTGGCAAGGCAAGCAGCCTGTCTTACCAAAGCCATAATGTCCATCTaGGCATTTGTCACACATGGAGCCGGTGACACCCACTTTGCATTG | + |
|
Preference number: 6 (lower is better) Translates to: LARQAACLTKAIMSI*AFVTHGAGDTHFAL Trigger: CAATGCAAAGTGGGTGTCACCGGCTCCATGTGTGACAAATGCCAAGATGGACATTATGGCTTTGGTAAGACAGGCTGCTTGCCTTGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
||
| CDS TCA 72 bp | TCTAGGCATTTCTCGCACCAGAACCCAGTGGTGTTATaGAGGCAGTTGATGCACTCACCACTCTCAGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SRHFSHQNPVVL*RQLMHSPLSGL Trigger: CAAGCCTGAGAGTGGTGAGTGCATCAACTGCCTTCATAACACCACTGGGTTCTGGTGCGAGAAATGCCTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| CDS GCA 72 bp | CACCTGTGTGAACATCACAACTATCAGACCGGTTGTTaGACTGGCAAGGCAAGCAGCCTGTCTTACCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: HLCEHHNYQTGC*TGKASSLSYQS Trigger: GCTTTGGTAAGACAGGCTGCTTGCCTTGCCAGTGCAACAACCGGTCTGATAGTTGTGATGTTCACACAGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| CDS TCA 72 bp | TCTCGCACCAGAACCCAGTGGTGTTATGAAGGCAGTTaGTGCACTCACCACTCTCAGGCTTGCAAATCTTTG | + |
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Preference number: 6 (lower is better) Translates to: SRTRTQWCYEGS*CTHHSQACKSL Trigger: CAAAGATTTGCAAGCCTGAGAGTGGTGAGTGCATCAACTGCCTTCATAACACCACTGGGTTCTGGTGCGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| CDS CCA 72 bp | GACCCTGATAACCCACATGACAATCACACTGCCCTGTaGTCTGGTTGCAGCGCTTTACATCCAAACTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: DPDNPHDNHTAL*SGCSALHPNFQ Trigger: TTGGAAGTTTGGATGTAAAGCGCTGCAACCAGACCACAGGGCAGTGTGATTGTCATGTGGGTTATCAGGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037881.3 ENSMUST00000107359.9 |
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| CDS CAA 72 bp | TGGCATTTGTCACACATGGAGCCGGTGACACCCACTTaGCATTGGCAATTCCCAGAACTGTTACAGAGGATG | + |
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Preference number: 6 (lower is better) Translates to: WHLSHMEPVTPT*HWQFPELLQRM Trigger: CATCCTCTGTAACAGTTCTGGGAATTGCCAATGCAAAGTGGGTGTCACCGGCTCCATGTGTGACAAATGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| CDS CCA 72 bp | ACCACTCTCAGGCTTGCAAATCTTTGGAGTTTTAATTaGGTCCACATGGCCATGACATTCGCACTGTGTGCA | + |
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Preference number: 6 (lower is better) Translates to: TTLRLANLWSFN*VHMAMTFALCA Trigger: TGCACACAGTGCGAATGTCATGGCCATGTGGACCCAATTAAAACTCCAAAGATTTGCAAGCCTGAGAGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| CDS CCA 72 bp | GTTGATGCACTCACCACTCTCAGGCTTGCAAATCTTTaGAGTTTTAATTGGGTCCACATGGCCATGACATTC | + |
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Preference number: 6 (lower is better) Translates to: VDALTTLRLANL*SFNWVHMAMTF Trigger: GAATGTCATGGCCATGTGGACCCAATTAAAACTCCAAAGATTTGCAAGCCTGAGAGTGGTGAGTGCATCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| CDS CAA 72 bp | CTCGATGGTCCAAAAGGGAGCATTGAGTTTCCGATTTaGGTACTCTCGGTACATGTACACAGCTCCTACAAA | + |
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Preference number: 6 (lower is better) Translates to: LDGPKGSIEFPI*VLSVHVHSSYK Trigger: TTTGTAGGAGCTGTGTACATGTACCGAGAGTACCAAAATCGGAAACTCAATGCTCCCTTTTGGACCATCGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| CDS TCA 72 bp | TTACTATTTTCCTGGCAGTTTAGACAAGCACCTGTGTaGACATCACAACTATCAGACCGGTTGTTGCACTGG | + |
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Preference number: 6 (lower is better) Translates to: LLFSWQFRQAPV*TSQLSDRLLHW Trigger: CCAGTGCAACAACCGGTCTGATAGTTGTGATGTTCACACAGGTGCTTGTCTAAACTGCCAGGAAAATAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| CDS TCA 72 bp | CAAATCTTTGGAGTTTTAATTGGGTCCACATGGCCATaGCATTCGCACTGTGTGCAGATGCTGTCAGAATTG | + |
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Preference number: 6 (lower is better) Translates to: QIFGVLIGSTWP*HSHCVQMLSEL Trigger: CAATTCTGACAGCATCTGCACACAGTGCGAATGTCATGGCCATGTGGACCCAATTAAAACTCCAAAGATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| CDS TCA 72 bp | TGTCTTCTTTCAGCTCGATGGTCCAAAAGGGAGCATTaGGTTTCCGATTTTGGTACTCTCGGTACATGTACA | + |
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Preference number: 6 (lower is better) Translates to: CLLSARWSKREH*VSDFGTLGTCT Trigger: TGTACATGTACCGAGAGTACCAAAATCGGAAACTCAATGCTCCCTTTTGGACCATCGAGCTGAAAGAAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| CDS CCA 72 bp | TCGATGGTCCAAAAGGGAGCATTGAGTTTCCGATTTTaGTACTCTCGGTACATGTACACAGCTCCTACAAAT | + |
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Preference number: 6 (lower is better) Translates to: SMVQKGALSFRF*YSRYMYTAPTN Trigger: ATTTGTAGGAGCTGTGTACATGTACCGAGAGTACCAAAATCGGAAACTCAATGCTCCCTTTTGGACCATCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| CDS CAA 72 bp | TTGTCTTCTTTCAGCTCGATGGTCCAAAAGGGAGCATaGAGTTTCCGATTTTGGTACTCTCGGTACATGTAC | + |
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Preference number: 6 (lower is better) Translates to: LSSFSSMVQKGA*SFRFWYSRYMY Trigger: GTACATGTACCGAGAGTACCAAAATCGGAAACTCAATGCTCCCTTTTGGACCATCGAGCTGAAAGAAGACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| CDS CAA 90 bp | AAACTGATATTGTCTTCTTTCAGCTCGATGGTCCAAAAGGGAGCATaGAGTTTCCGATTTTGGTACTCTCGGTACATGTACACAGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: KLILSSFSSMVQKGA*SFRFWYSRYMYTAP Trigger: AGGAGCTGTGTACATGTACCGAGAGTACCAAAATCGGAAACTCAATGCTCCCTTTTGGACCATCGAGCTGAAAGAAGACAATATCAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| CDS GCA 72 bp | GGTCCACATGGCCATGACATTCGCACTGTGTGCAGATaGTGTCAGAATTGTAATAGCCATTTTCACATTTAT | + |
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Preference number: 6 (lower is better) Translates to: GPHGHDIRTVCR*CQNCNSHFHIY Trigger: ATAAATGTGAAAATGGCTATTACAATTCTGACAGCATCTGCACACAGTGCGAATGTCATGGCCATGTGGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| CDS CAA 72 bp | TTTATTGCAGTTCTGGCCTGTGTAACCATCTTTACATaGGTCACATGTAGGCTCCAACTCTCCAGATTCAAT | + |
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Preference number: 6 (lower is better) Translates to: FIAVLACVTIFT*VTCRLQLSRFN Trigger: ATTGAATCTGGAGAGTTGGAGCCTACATGTGACCAATGTAAAGATGGTTACACAGGCCAGAACTGCAATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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| CDS CAA 72 bp | AATGGTAGAACCTTCAGGAGTTGGAACAATAACTTCTaGCTTGATGCAGTTTCTCTGAAGATCTCGAACATA | + |
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Preference number: 6 (lower is better) Translates to: NGRTFRSWNNNF*LDAVSLKISNI Trigger: TATGTTCGAGATCTTCAGAGAAACTGCATCAAGCAAGAAGTTATTGTTCCAACTCCTGAAGGTTCTACCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107359.9 |
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