RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MEGF6 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000057751

Ensembl transcript IDs: ENSMUST00000030897.15, ENSMUST00000128700.3, ENSMUST00000152159.8

Found 378 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGTGGGGCCTTGTCTATTCCCACCTTGGTCCCATCCCAGGTCGCTaGAGAGGGCCAGGATTCCACAGCACAGCCTGCAGGGTCCCCATG +
Preference number: 1 (lower is better)
Translates to: RWGLVYSHLGPIPGR*RGPGFHSTACRVPM
Trigger: CATGGGGACCCTGCAGGCTGTGCTGTGGAATCCTGGCCCTCTTCAGCGACCTGGGATGGGACCAAGGTGGGAATAGACAAGGCCCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR CCA 90 bp CCAGAAGGACCTGGCAGGCAGGTGGGGCCTTGTCTATTCCCACCTTaGTCCCATCCCAGGTCGCTGAAGAGGGCCAGGATTCCACAGCAC +
Preference number: 1 (lower is better)
Translates to: PEGPGRQVGPCLFPP*SHPRSLKRARIPQH
Trigger: GTGCTGTGGAATCCTGGCCCTCTTCAGCGACCTGGGATGGGACCAAGGTGGGAATAGACAAGGCCCCACCTGCCTGCCAGGTCCTTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR CCA 90 bp CGGCCTTTGAAGTGTCCCTGGAGGTTTCAGCTGCCTCGGATGCAGTaGGAGAGGGAGGAGGCAGCCACCACCCAGATCCAAAACAAGGGG +
Preference number: 1 (lower is better)
Translates to: RPLKCPWRFQLPRMQ*EREEAATTQIQNKG
Trigger: CCCCTTGTTTTGGATCTGGGTGGTGGCTGCCTCCTCCCTCTCCCACTGCATCCGAGGCAGCTGAAACCTCCAGGGACACTTCAAAGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR TCA 90 bp AGGGAGGAGGCAGCCACCACCCAGATCCAAAACAAGGGGCTTGAGTaGGAGCAGAGGCCTGGCTCCTGTGATGCTGCCTGTCCATCACTG +
Preference number: 1 (lower is better)
Translates to: REEAATTQIQNKGLE*EQRPGSCDAACPSL
Trigger: CAGTGATGGACAGGCAGCATCACAGGAGCCAGGCCTCTGCTCTCACTCAAGCCCCTTGTTTTGGATCTGGGTGGTGGCTGCCTCCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR CCA 90 bp TGGACTACATTTCCAGGTAAACAGTTGGCTGGCTGCAGCAGTCCATaGCCTAGCACCAGAAGGACCTGGCAGGCAGGTGGGGCCTTGTCT +
Preference number: 1 (lower is better)
Translates to: WTTFPGKQLAGCSSP*PSTRRTWQAGGALS
Trigger: AGACAAGGCCCCACCTGCCTGCCAGGTCCTTCTGGTGCTAGGCCATGGACTGCTGCAGCCAGCCAACTGTTTACCTGGAAATGTAGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR CCA 90 bp ATGCTGCCTGTCCATCACTGTGTTGAGGCAGGGGGTCAGCTGGCTTaGTTAAGCATGGATTTCCTTCCACACTACCCCTGCCCTGCTCCC +
Preference number: 1 (lower is better)
Translates to: MLPVHHCVEAGGQLA*LSMDFLPHYPCPAP
Trigger: GGGAGCAGGGCAGGGGTAGTGTGGAAGGAAATCCATGCTTAACCAAGCCAGCTGACCCCCTGCCTCAACACAGTGATGGACAGGCAGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR GCA 90 bp ACAGAGGGGTACAGGAGGTTCCCATTCAAGAACCCTCAGGCCACCTaGTCTTGGAAGGACCCACGGAGTCTACAGAAAGCACAGAAACCC +
Preference number: 1 (lower is better)
Translates to: TEGYRRFPFKNPQAT*SWKDPRSLQKAQKP
Trigger: GGGTTTCTGTGCTTTCTGTAGACTCCGTGGGTCCTTCCAAGAGCAGGTGGCCTGAGGGTTCTTGAATGGGAACCTCCTGTACCCCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR CCA 90 bp GGGTACAGGAGGTTCCCATTCAAGAACCCTCAGGCCACCTGCTCTTaGAAGGACCCACGGAGTCTACAGAAAGCACAGAAACCCAGGCAA +
Preference number: 1 (lower is better)
Translates to: GYRRFPFKNPQATCS*KDPRSLQKAQKPRQ
Trigger: TTGCCTGGGTTTCTGTGCTTTCTGTAGACTCCGTGGGTCCTTCCAAGAGCAGGTGGCCTGAGGGTTCTTGAATGGGAACCTCCTGTACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR CCA 90 bp TGGAAGGACCCACGGAGTCTACAGAAAGCACAGAAACCCAGGCAATaGGGACACCACTGTGCCTTTAACTCACTGGGTTTTACAAAACCC +
Preference number: 1 (lower is better)
Translates to: WKDPRSLQKAQKPRQ*GHHCAFNSLGFTKP
Trigger: GGGTTTTGTAAAACCCAGTGAGTTAAAGGCACAGTGGTGTCCCCATTGCCTGGGTTTCTGTGCTTTCTGTAGACTCCGTGGGTCCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR CAA 90 bp AGTCCATGGCCTAGCACCAGAAGGACCTGGCAGGCAGGTGGGGCCTaGTCTATTCCCACCTTGGTCCCATCCCAGGTCGCTGAAGAGGGC +
Preference number: 2 (lower is better)
Translates to: SPWPSTRRTWQAGGA*SIPTLVPSQVAEEG
Trigger: GCCCTCTTCAGCGACCTGGGATGGGACCAAGGTGGGAATAGACAAGGCCCCACCTGCCTGCCAGGTCCTTCTGGTGCTAGGCCATGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR CAA 90 bp GGGAGAGGGAGGAGGCAGCCACCACCCAGATCCAAAACAAGGGGCTaGAGTGAGAGCAGAGGCCTGGCTCCTGTGATGCTGCCTGTCCAT +
Preference number: 2 (lower is better)
Translates to: GRGRRQPPPRSKTRG*SESRGLAPVMLPVH
Trigger: ATGGACAGGCAGCATCACAGGAGCCAGGCCTCTGCTCTCACTCAAGCCCCTTGTTTTGGATCTGGGTGGTGGCTGCCTCCTCCCTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR-3UTR TCA 90 bp TGGCCGACTGACTTGCTCCCCACTACTGGCCACACCACTGCGGCCTTTGAAGTGCCAAAACAAGGGGCTTaGGTGAGAGCAGAGGCCTGG +
Preference number: 2 (lower is better)
Translates to: WPTDLLPTTGHTTAAFEVPKQGA*VRAEAW
Trigger: CCAGGCCTCTGCTCTCACTCAAGCCCCTTGTTTTGG...CACTTCAAAGGCCGCAGTGGTGTGGCCAGTAGTGGGGAGCAAGTCAGTCGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR-3UTR TCA 90 bp TTTCCAGGTAAACAGTTGGCTGGCTGCAGCAGTCCATGGCCTAGCACCAGAAGGAGGCCTTCTTCCCCATaGCCATGGAGCCCGGGTGTG +
Preference number: 2 (lower is better)
Translates to: FPGKQLAGCSSPWPSTRRRPSSP*PWSPGV
Trigger: CACACCCGGGCTCCATGGTCATGGGGAAGAAGGCCT...CCTTCTGGTGCTAGGCCATGGACTGCTGCAGCCAGCCAACTGTTTACCTGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR-3UTR CCA 90 bp CCATACTGCCTGCTTCACATTCACACAACGCTCCACCCCACTCTCTGCTCCATCGACCTGGCAGGCAGGTaGGGCCTTGTCTATTCCCAC +
Preference number: 2 (lower is better)
Translates to: PYCLLHIHTTLHPTLCSIDLAGR*GLVYSH
Trigger: GTGGGAATAGACAAGGCCCCACCTGCCTGCCAGGTC...GATGGAGCAGAGAGTGGGGTGGAGCGTTGTGTGAATGTGAAGCAGGCAGTATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR CAA 90 bp GGGGTACAGGAGGTTCCCATTCAAGAACCCTCAGGCCACCTGCTCTaGGAAGGACCCACGGAGTCTACAGAAAGCACAGAAACCCAGGCA +
Preference number: 2 (lower is better)
Translates to: GVQEVPIQEPSGHLL*EGPTESTESTETQA
Trigger: TGCCTGGGTTTCTGTGCTTTCTGTAGACTCCGTGGGTCCTTCCAAGAGCAGGTGGCCTGAGGGTTCTTGAATGGGAACCTCCTGTACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR-3UTR CCA 90 bp GAAGGACCCACGGAGTCTACAGAAAGCACAGAAACCCAGGCAATGGGGACACCACTTGATCCCACTTGCTaGAGACCCCACAGGCCACTG +
Preference number: 2 (lower is better)
Translates to: EGPTESTESTETQAMGTPLDPTC*RPHRPL
Trigger: CAGTGGCCTGTGGGGTCTCCAGCAAGTGGGATCAAG...TGGTGTCCCCATTGCCTGGGTTTCTGTGCTTTCTGTAGACTCCGTGGGTCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR-3UTR CCA 90 bp ACACAACGCTCCACCCCACTCTCTGCTCCATCCCTCTGCTTTAACCTAAGTCTCCTTGCTCCCCACTACTaGCCACACCACTGCGGCCTT +
Preference number: 2 (lower is better)
Translates to: TQRSTPLSAPSLCFNLSLLAPHY*PHHCGL
Trigger: AAGGCCGCAGTGGTGTGGCCAGTAGTGGGGAGCAAG...GAGACTTAGGTTAAAGCAGAGGGATGGAGCAGAGAGTGGGGTGGAGCGTTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR-3UTR TCA 90 bp AGGGGGTCAGCTGGCTTGGTTAAGCATGGATTTCCTTCCACACTACCCCTGCCCTGGAACAATTCACCTTaGCAGGCACTGCCTCATGCC +
Preference number: 2 (lower is better)
Translates to: RGSAGLVKHGFPSTLPLPWNNSP*QALPHA
Trigger: GGCATGAGGCAGTGCCTGTCAAGGTGAATTGTTCCA...GGGCAGGGGTAGTGTGGAAGGAAATCCATGCTTAACCAAGCCAGCTGACCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR-3UTR TCA 90 bp AGGGGGTCAGCTGGCTTGGTTAAGCATGGATTTCCTTCCACACTACCCCTGCCCGGGTGTGTGGCTATATaGCTATCCATAGCTGTCCAC +
Preference number: 2 (lower is better)
Translates to: RGSAGLVKHGFPSTLPLPGCVAI*LSIAVH
Trigger: GTGGACAGCTATGGATAGTCATATAGCCACACACCC...GGGCAGGGGTAGTGTGGAAGGAAATCCATGCTTAACCAAGCCAGCTGACCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR-3UTR CCA 90 bp ACACAACGCTCCACCCCACTCTCTGCTCCATCCCTCTGCTTTAACCTAAGTCTCGCCCAGCCGACTTCCTaGATTCCTTGTGTCCAAAGG +
Preference number: 2 (lower is better)
Translates to: TQRSTPLSAPSLCFNLSLAQPTS*IPCVQR
Trigger: CCTTTGGACACAAGGAATCCAGGAAGTCGGCTGGGC...GAGACTTAGGTTAAAGCAGAGGGATGGAGCAGAGAGTGGGGTGGAGCGTTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR-3UTR CCA 90 bp GGTGCTTTAGAATTCCTCCTTCGTCCCCATACTGCCTGCTTCACATTCACACAAAGCACCAGAAGGACCTaGCAGGCAGGTGGGGCCTTG +
Preference number: 2 (lower is better)
Translates to: GALEFLLRPHTACFTFTQSTRRT*QAGGAL
Trigger: CAAGGCCCCACCTGCCTGCCAGGTCCTTCTGGTGCT...TTGTGTGAATGTGAAGCAGGCAGTATGGGGACGAAGGAGGAATTCTAAAGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR-3UTR CCA 90 bp ACACAACGCTCCACCCCACTCTCTGCTCCATCCCTCTGCTTTAACCTAAGTCTCCCTTTGAAGTGTCCCTaGAGGTTTCAGCTGCCTCGG +
Preference number: 2 (lower is better)
Translates to: TQRSTPLSAPSLCFNLSLPLKCP*RFQLPR
Trigger: CCGAGGCAGCTGAAACCTCCAGGGACACTTCAAAGG...GAGACTTAGGTTAAAGCAGAGGGATGGAGCAGAGAGTGGGGTGGAGCGTTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR-3UTR GCA 90 bp CTGGAGGTGTCTCAGGCATCAATGTGTTCTCTGGAACAATTCACCTTGACAGGCACCCTTGATCCCACTTaGTGGAGACCCCACAGGCCA +
Preference number: 2 (lower is better)
Translates to: LEVSQASMCSLEQFTLTGTLDPT*WRPHRP
Trigger: TGGCCTGTGGGGTCTCCAGCAAGTGGGATCAAGGGT...GCCTGTCAAGGTGAATTGTTCCAGAGAACACATTGATGCCTGAGACACCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR-3UTR CCA 90 bp GAAGGACCCACGGAGTCTACAGAAAGCACAGAAACCCAGGCAATGGGGACACCATTCCAGGTAAACAGTTaGCTGGCTGCAGCAGTCCAT +
Preference number: 2 (lower is better)
Translates to: EGPTESTESTETQAMGTPFQVNS*LAAAVH
Trigger: ATGGACTGCTGCAGCCAGCCAACTGTTTACCTGGAA...TGGTGTCCCCATTGCCTGGGTTTCTGTGCTTTCTGTAGACTCCGTGGGTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR CAA 90 bp ATGGATTTCCTTCCACACTACCCCTGCCCTGCTCCCTCTGGGACATaGTTCTGTAGTCTCTGGAGGTGTCTCAGGCATCAATGTGTTCTC +
Preference number: 2 (lower is better)
Translates to: MDFLPHYPCPAPSGT*FCSLWRCLRHQCVL
Trigger: GAGAACACATTGATGCCTGAGACACCTCCAGAGACTACAGAACAATGTCCCAGAGGGAGCAGGGCAGGGGTAGTGTGGAAGGAAATCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR-3UTR CCA 90 bp AGGGGGTCAGCTGGCTTGGTTAAGCATGGATTTCCTTCCACACTACCCCTGCCCTTGTTCTGTAGTCTCTaGAGGTGTCTCAGGCATCAA +
Preference number: 2 (lower is better)
Translates to: RGSAGLVKHGFPSTLPLPLFCSL*RCLRHQ
Trigger: TTGATGCCTGAGACACCTCCAGAGACTACAGAACAA...GGGCAGGGGTAGTGTGGAAGGAAATCCATGCTTAACCAAGCCAGCTGACCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR-3UTR CCA 90 bp CTGAAGCATTACATTACATGCATGTCATTACAGAGGGGTACAGGAGGTTCCCATCAGAAACCCAGGCAATaGGGACACCACTGTGCCTTT +
Preference number: 2 (lower is better)
Translates to: LKHYITCMSLQRGTGGSHQKPRQ*GHHCAF
Trigger: AAAGGCACAGTGGTGTCCCCATTGCCTGGGTTTCTG...ATGGGAACCTCCTGTACCCCTCTGTAATGACATGCATGTAATGTAATGCTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR-3UTR CAA 90 bp CTGCTGGCTACAGCTGCTGCCTCTCTGCCTGTCACAGGACCGGTGATGCCCTGTAGAGGCCTGGGTCCCTaGGGCTGGAACACAGTAGTG +
Preference number: 3 (lower is better)
Translates to: LLATAAASLPVTGPVMPCRGLGP*GWNTVV
Trigger: CACTACTGTGTTCCAGCCCAAGGGACCCAGGCCTCT...ACAGGGCATCACCGGTCCTGTGACAGGCAGAGAGGCAGCAGCTGTAGCCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR CCA 72 bp CCTGGCAGGCAGGTGGGGCCTTGTCTATTCCCACCTTaGTCCCATCCCAGGTCGCTGAAGAGGGCCAGGATT +
Preference number: 3 (lower is better)
Translates to: PGRQVGPCLFPP*SHPRSLKRARI
Trigger: AATCCTGGCCCTCTTCAGCGACCTGGGATGGGACCAAGGTGGGAATAGACAAGGCCCCACCTGCCTGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR CCA 72 bp GGCTGCAGCAGTCCATGGCCTAGCACCAGAAGGACCTaGCAGGCAGGTGGGGCCTTGTCTATTCCCACCTTG +
Preference number: 3 (lower is better)
Translates to: GCSSPWPSTRRT*QAGGALSIPTL
Trigger: CAAGGTGGGAATAGACAAGGCCCCACCTGCCTGCCAGGTCCTTCTGGTGCTAGGCCATGGACTGCTGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR-3UTR CAA 90 bp TGGCCGACTGACTTGCTCCCCACTACTGGCCACACCACTGCGGCCTTTGAAGTGTCAGGCCACCTGCTCTaGGAAGGACCCACGGAGTCT +
Preference number: 3 (lower is better)
Translates to: WPTDLLPTTGHTTAAFEVSGHLL*EGPTES
Trigger: AGACTCCGTGGGTCCTTCCAAGAGCAGGTGGCCTGA...CACTTCAAAGGCCGCAGTGGTGTGGCCAGTAGTGGGGAGCAAGTCAGTCGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR TCA 72 bp CTTGCTCCCCACTACTGGCCACACCACTGCGGCCTTTaGAGTGTCCCTGGAGGTTTCAGCTGCCTCGGATGC +
Preference number: 3 (lower is better)
Translates to: LAPHYWPHHCGL*SVPGGFSCLGC
Trigger: GCATCCGAGGCAGCTGAAACCTCCAGGGACACTTCAAAGGCCGCAGTGGTGTGGCCAGTAGTGGGGAGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR GCA 72 bp CCCTTGATCCCACTTGCTGGAGACCCCACAGGCCACTaGCTAAGTTCTGGGGTCAGGCAGCTTCCAGCTGAC +
Preference number: 3 (lower is better)
Translates to: PLIPLAGDPTGH*LSSGVRQLPAD
Trigger: GTCAGCTGGAAGCTGCCTGACCCCAGAACTTAGGCAGTGGCCTGTGGGGTCTCCAGCAAGTGGGATCAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR GCA 72 bp GCCTCTCTATCTCCTACCTCTGCTGGCTACAGCTGCTaGCTCTCTGCCTGTCACAGGACCGGTGATGCCCTG +
Preference number: 3 (lower is better)
Translates to: ASLSPTSAGYSC*LSACHRTGDAL
Trigger: CAGGGCATCACCGGTCCTGTGACAGGCAGAGAGGCAGCAGCTGTAGCCAGCAGAGGTAGGAGATAGAGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR GCA 72 bp TGGGCCTCTCTATCTCCTACCTCTGCTGGCTACAGCTaGTGCCTCTCTGCCTGTCACAGGACCGGTGATGCC +
Preference number: 3 (lower is better)
Translates to: WASLSPTSAGYS*CLSACHRTGDA
Trigger: GGCATCACCGGTCCTGTGACAGGCAGAGAGGCAGCAGCTGTAGCCAGCAGAGGTAGGAGATAGAGAGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR CCA 72 bp CTACTGGCCACACCACTGCGGCCTTTGAAGTGTCCCTaGAGGTTTCAGCTGCCTCGGATGCAGTGGGAGAGG +
Preference number: 3 (lower is better)
Translates to: LLATPLRPLKCP*RFQLPRMQWER
Trigger: CCTCTCCCACTGCATCCGAGGCAGCTGAAACCTCCAGGGACACTTCAAAGGCCGCAGTGGTGTGGCCAGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR TCA 72 bp CTTGTCTATTCCCACCTTGGTCCCATCCCAGGTCGCTaGAGAGGGCCAGGATTCCACAGCACAGCCTGCAGG +
Preference number: 3 (lower is better)
Translates to: LVYSHLGPIPGR*RGPGFHSTACR
Trigger: CCTGCAGGCTGTGCTGTGGAATCCTGGCCCTCTTCAGCGACCTGGGATGGGACCAAGGTGGGAATAGACAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR CCA 72 bp TTTCCAGGTAAACAGTTGGCTGGCTGCAGCAGTCCATaGCCTAGCACCAGAAGGACCTGGCAGGCAGGTGGG +
Preference number: 3 (lower is better)
Translates to: FPGKQLAGCSSP*PSTRRTWQAGG
Trigger: CCCACCTGCCTGCCAGGTCCTTCTGGTGCTAGGCCATGGACTGCTGCAGCCAGCCAACTGTTTACCTGGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR-3UTR CAA 90 bp TGGCCGACTGACTTGCTCCCCACTACTGGCCACACCACTGCGGCCTTTGAAGTGTTGTCTATTCCCACCTaGGTCCCATCCCAGGTCGCT +
Preference number: 3 (lower is better)
Translates to: WPTDLLPTTGHTTAAFEVLSIPT*VPSQVA
Trigger: AGCGACCTGGGATGGGACCAAGGTGGGAATAGACAA...CACTTCAAAGGCCGCAGTGGTGTGGCCAGTAGTGGGGAGCAAGTCAGTCGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR-3UTR CAA 90 bp TGGCCGACTGACTTGCTCCCCACTACTGGCCACACCACTGCGGCCTTTGAAGTGTCCAAAACAAGGGGCTaGAGTGAGAGCAGAGGCCTG +
Preference number: 3 (lower is better)
Translates to: WPTDLLPTTGHTTAAFEVSKTRG*SESRGL
Trigger: CAGGCCTCTGCTCTCACTCAAGCCCCTTGTTTTGGA...CACTTCAAAGGCCGCAGTGGTGTGGCCAGTAGTGGGGAGCAAGTCAGTCGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR CCA 72 bp CCATGTAAACAGTGGCCCGAAGCCCAGCCGACTTCCTaGATTCCTTGTGTCCAAAGGAGGCCTTCTTCCCCA +
Preference number: 3 (lower is better)
Translates to: PCKQWPEAQPTS*IPCVQRRPSSP
Trigger: TGGGGAAGAAGGCCTCCTTTGGACACAAGGAATCCAGGAAGTCGGCTGGGCTTCGGGCCACTGTTTACATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR TCA 72 bp CTCTGCTTTAACCTAAGTCTCTATACAGTGGCCGACTaGCTTGCTCCCCACTACTGGCCACACCACTGCGGC +
Preference number: 3 (lower is better)
Translates to: LCFNLSLYTVAD*LAPHYWPHHCG
Trigger: GCCGCAGTGGTGTGGCCAGTAGTGGGGAGCAAGTCAGTCGGCCACTGTATAGAGACTTAGGTTAAAGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR CCA 72 bp GTCCATCACTGTGTTGAGGCAGGGGGTCAGCTGGCTTaGTTAAGCATGGATTTCCTTCCACACTACCCCTGC +
Preference number: 3 (lower is better)
Translates to: VHHCVEAGGQLA*LSMDFLPHYPC
Trigger: GCAGGGGTAGTGTGGAAGGAAATCCATGCTTAACCAAGCCAGCTGACCCCCTGCCTCAACACAGTGATGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR GCA 72 bp TACAGGAGGTTCCCATTCAAGAACCCTCAGGCCACCTaGTCTTGGAAGGACCCACGGAGTCTACAGAAAGCA +
Preference number: 3 (lower is better)
Translates to: YRRFPFKNPQAT*SWKDPRSLQKA
Trigger: TGCTTTCTGTAGACTCCGTGGGTCCTTCCAAGAGCAGGTGGCCTGAGGGTTCTTGAATGGGAACCTCCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR-3UTR CAA 90 bp ATGCTGCCTGTCCATCACTGTGTTGAGGCAGGGGGTCAGCTGGCTTGGTTAAGCGGTTTTACAAAACCCTaGATCCCACTTGCTGGAGAC +
Preference number: 3 (lower is better)
Translates to: MLPVHHCVEAGGQLAWLSGFTKP*IPLAGD
Trigger: GTCTCCAGCAAGTGGGATCAAGGGTTTTGTAAAACC...GCTTAACCAAGCCAGCTGACCCCCTGCCTCAACACAGTGATGGACAGGCAGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR GCA 72 bp ATCCATGGCTTTCCAGAAGAGGTGTGGATCCAAAAGTaGCACCTCTATCTTAGTCACCAGCAGAGGCCTGGG +
Preference number: 3 (lower is better)
Translates to: IHGFPEEVWIQK*HLYLSHQQRPG
Trigger: CCCAGGCCTCTGCTGGTGACTAAGATAGAGGTGGCACTTTTGGATCCACACCTCTTCTGGAAAGCCATGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR GCA 72 bp GGTGCTTTAGAATTCCTCCTTCGTCCCCATACTGCCTaGTTCACATTCACACAACGCTCCACCCCACTCTCT +
Preference number: 3 (lower is better)
Translates to: GALEFLLRPHTA*FTFTQRSTPLS
Trigger: AGAGAGTGGGGTGGAGCGTTGTGTGAATGTGAAGCAGGCAGTATGGGGACGAAGGAGGAATTCTAAAGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR CCA 72 bp AGGTTCCCATTCAAGAACCCTCAGGCCACCTGCTCTTaGAAGGACCCACGGAGTCTACAGAAAGCACAGAAA +
Preference number: 3 (lower is better)
Translates to: RFPFKNPQATCS*KDPRSLQKAQK
Trigger: TTTCTGTGCTTTCTGTAGACTCCGTGGGTCCTTCCAAGAGCAGGTGGCCTGAGGGTTCTTGAATGGGAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR CCA 72 bp TGCCCTGCTCCCTCTGGGACATTGTTCTGTAGTCTCTaGAGGTGTCTCAGGCATCAATGTGTTCTCTGGAAC +
Preference number: 3 (lower is better)
Translates to: CPAPSGTLFCSL*RCLRHQCVLWN
Trigger: GTTCCAGAGAACACATTGATGCCTGAGACACCTCCAGAGACTACAGAACAATGTCCCAGAGGGAGCAGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR TCA 72 bp CTCAGGCATCAATGTGTTCTCTGGAACAATTCACCTTaGCAGGCACTGCCTCATGCCCTAGAGCTGGAAGTC +
Preference number: 3 (lower is better)
Translates to: LRHQCVLWNNSP*QALPHALELEV
Trigger: GACTTCCAGCTCTAGGGCATGAGGCAGTGCCTGTCAAGGTGAATTGTTCCAGAGAACACATTGATGCCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR CCA 72 bp CCACGGAGTCTACAGAAAGCACAGAAACCCAGGCAATaGGGACACCACTGTGCCTTTAACTCACTGGGTTTT +
Preference number: 3 (lower is better)
Translates to: PRSLQKAQKPRQ*GHHCAFNSLGF
Trigger: AAAACCCAGTGAGTTAAAGGCACAGTGGTGTCCCCATTGCCTGGGTTTCTGTGCTTTCTGTAGACTCCGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR CCA 72 bp CTGTCCACAGCAATCCATGGCTTTCCAGAAGAGGTGTaGATCCAAAAGTGCCACCTCTATCTTAGTCACCAG +
Preference number: 3 (lower is better)
Translates to: LSTAIHGFPEEV*IQKCHLYLSHQ
Trigger: CTGGTGACTAAGATAGAGGTGGCACTTTTGGATCCACACCTCTTCTGGAAAGCCATGGATTGCTGTGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR TCA 72 bp ACCTGTGGTTTAGAAGGAAAATTTCAGTTCTCCTCATaGTGGCCATGTAGGAAGTGTGCCGTGAGGTCTCTT +
Preference number: 3 (lower is better)
Translates to: TCGLEGKFQFSS*WPCRKCAVRSL
Trigger: AAGAGACCTCACGGCACACTTCCTACATGGCCATCATGAGGAGAACTGAAATTTTCCTTCTAAACCACAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR TCA 72 bp GGCTCTTCCCAAAAATATTTCCAAATTAGACATGGGTaGACCTGTGGGCATGGTGATAGTTTAGCTGGATAT +
Preference number: 3 (lower is better)
Translates to: GSSQKYFQIRHG*TCGHGDSLAGY
Trigger: ATATCCAGCTAAACTATCACCATGCCCACAGGTTCACCCATGTCTAATTTGGAAATATTTTTGGGAAGAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR TCA 90 bp CTGCTGGCTACAGCTGCTGCCTCTCTGCCTGTCACAGGACCGGTGATGCCCTGTACATACGCAGGCCCCTaGAGCAGGGTGGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: LLATAAASLPVTGPVMPCTYAGP*SRVAGP
Trigger: TGGGCCTGCCACCCTGCTTCAGGGGCCTGCGTATGT...ACAGGGCATCACCGGTCCTGTGACAGGCAGAGAGGCAGCAGCTGTAGCCAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp CACCAGCAGAGGCCTGGGTCCCTTGGGCTGGAACACAGTAGTGGGCCTCTGTGGCGGACAAAGGGCAGCTaGCCATCCAGGTCCACCACG +
Preference number: 4 (lower is better)
Translates to: HQQRPGSLGLEHSSGPLWRTKGS*PSRSTT
Trigger: CGTGGTGGACCTGGATGGCCAGCTGCCCTTTGTCCG...CCACAGAGGCCCACTACTGTGTTCCAGCCCAAGGGACCCAGGCCTCTGCTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp TGGCCGACTGACTTGCTCCCCACTACTGGCCACACCACTGCGGCCTTTGAAGTGAGTCTGGGCACAGTGTaGGCCCCAGCGGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: WPTDLLPTTGHTTAAFEVSLGTV*APAASW
Trigger: CCAGCTGGCCGCTGGGGCCCACACTGTGCCCAGACT...CACTTCAAAGGCCGCAGTGGTGTGGCCAGTAGTGGGGAGCAAGTCAGTCGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR GCA 90 bp CACCAGCAGAGGCCTGGGTCCCTTGGGCTGGAACACAGTAGTGGGCCTCTGTGGAGTTGCAGGGGTGGATaGAGTCAGGCCCCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: HQQRPGSLGLEHSSGPLWSCRGG*SQAPSV
Trigger: GACACTGGGGGCCTGACTGCATCCACCCCTGCAACT...CCACAGAGGCCCACTACTGTGTTCCAGCCCAAGGGACCCAGGCCTCTGCTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp ATCTTAGTCACCAGCAGAGGCCTGGGTCCCTTGGGCTGGAACACAGTAGTGGGCGGGTGGCAGCCACAGTaGGCAAGGCCCCGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: ILVTSRGLGPLGWNTVVGGWQPQ*ARPRSS
Trigger: GGAACTCCGGGGCCTTGCCCACTGTGGCTGCCACCC...GCCCACTACTGTGTTCCAGCCCAAGGGACCCAGGCCTCTGCTGGTGACTAAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp ATCTTAGTCACCAGCAGAGGCCTGGGTCCCTTGGGCTGGAACACAGTAGTGGGCTCGCAGCGCTCGCCCTaGAAGCCGGCCTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: ILVTSRGLGPLGWNTVVGSQRSP*KPALQE
Trigger: CTCCTGCAAGGCCGGCTTCCAGGGCGAGCGCTGCGA...GCCCACTACTGTGTTCCAGCCCAAGGGACCCAGGCCTCTGCTGGTGACTAAGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp TGGCCGACTGACTTGCTCCCCACTACTGGCCACACCACTGCGGCCTTTGAAGTGCCCACTGGGCACTCTTaGCCACAGTCCTCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: WPTDLLPTTGHTTAAFEVPTGHS*PQSSPW
Trigger: CCAGGGGGAGGACTGTGGCCAAGAGTGCCCAGTGGG...CACTTCAAAGGCCGCAGTGGTGTGGCCAGTAGTGGGGAGCAAGTCAGTCGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR TCA 90 bp TGGCCGACTGACTTGCTCCCCACTACTGGCCACACCACTGCGGCCTTTGAAGTGGTGACTACAGCCGTGTaGGCAGCCTCCGTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: WPTDLLPTTGHTTAAFEVVTTAV*AASVAS
Trigger: GCTGGCAACGGAGGCTGCTCACACGGCTGTAGTCAC...CACTTCAAAGGCCGCAGTGGTGTGGCCAGTAGTGGGGAGCAAGTCAGTCGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR GCA 90 bp CACCAGCAGAGGCCTGGGTCCCTTGGGCTGGAACACAGTAGTGGGCCTCTGTGGGCCGGAAGCCGGGTTTaGACTCACAGAGGTAAGAGC +
Preference number: 4 (lower is better)
Translates to: HQQRPGSLGLEHSSGPLWAGSRV*THRGKS
Trigger: GCTCTTACCTCTGTGAGTGCAAACCCGGCTTCCGGC...CCACAGAGGCCCACTACTGTGTTCCAGCCCAAGGGACCCAGGCCTCTGCTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR GCA 90 bp CTGCTGGCTACAGCTGCTGCCTCTCTGCCTGTCACAGGACCGGTGATGCCCTGTGGTCCCAAACCAGCCTaGTGGGCAAGCATCCTGGCA +
Preference number: 4 (lower is better)
Translates to: LLATAAASLPVTGPVMPCGPKPA*WASILA
Trigger: TGCCAGGATGCTTGCCCAGCAGGCTGGTTTGGGACC...ACAGGGCATCACCGGTCCTGTGACAGGCAGAGAGGCAGCAGCTGTAGCCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp CTGCTGGCTACAGCTGCTGCCTCTCTGCCTGTCACAGGACCGGTGATGCCCTGTTCTGGGCACGTGCACTaGCCCAAGATGGGGTCACAG +
Preference number: 4 (lower is better)
Translates to: LLATAAASLPVTGPVMPCSGHVH*PKMGSQ
Trigger: CTGTGACCCCATCTTGGGCCAGTGCACGTGCCCAGA...ACAGGGCATCACCGGTCCTGTGACAGGCAGAGAGGCAGCAGCTGTAGCCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp GGAAGGACCCACGGAGTCTACAGAAAGCACAGAAACCCAGGCAATGGGGACACCGGCGTGCTCACAGTGTaGCCCCATCCAGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: GRTHGVYRKHRNPGNGDTGVLTV*PHPAQG
Trigger: CCCCTGGGCTGGATGGGGCCACACTGTGAGCACGCC...GGTGTCCCCATTGCCTGGGTTTCTGTGCTTTCTGTAGACTCCGTGGGTCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp ATCTTAGTCACCAGCAGAGGCCTGGGTCCCTTGGGCTGGAACACAGTAGTGGGCTCCTGCACGCCCTGGTaGGCAAAGGCAGAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: ILVTSRGLGPLGWNTVVGSCTPW*AKAEAA
Trigger: AGCGGCCTCTGCCTTTGCCCACCAGGGCGTGCAGGA...GCCCACTACTGTGTTCCAGCCCAAGGGACCCAGGCCTCTGCTGGTGACTAAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR CAA 72 bp CCTAGCACCAGAAGGACCTGGCAGGCAGGTGGGGCCTaGTCTATTCCCACCTTGGTCCCATCCCAGGTCGCT +
Preference number: 4 (lower is better)
Translates to: PSTRRTWQAGGA*SIPTLVPSQVA
Trigger: AGCGACCTGGGATGGGACCAAGGTGGGAATAGACAAGGCCCCACCTGCCTGCCAGGTCCTTCTGGTGCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR TCA 90 bp TGGCCGACTGACTTGCTCCCCACTACTGGCCACACCACTGCGGCCTTTGAAGTGAGCCAGGACAGCACCTaGACACAGTGCGAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: WPTDLLPTTGHTTAAFEVSQDST*TQCEPL
Trigger: CAGAGGCTCGCACTGTGTTCAGGTGCTGTCCTGGCT...CACTTCAAAGGCCGCAGTGGTGTGGCCAGTAGTGGGGAGCAAGTCAGTCGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR TCA 90 bp CCATACTGCCTGCTTCACATTCACACAACGCTCCACCCCACTCTCTGCTCCATCAGGCTCTCTGGCAGCTaGGGCCAGTCCACCCAGGGG +
Preference number: 4 (lower is better)
Translates to: PYCLLHIHTTLHPTLCSIRLSGS*GQSTQG
Trigger: CCCCTGGGTGGACTGGCCTCAGCTGCCAGAGAGCCT...GATGGAGCAGAGAGTGGGGTGGAGCGTTGTGTGAATGTGAAGCAGGCAGTATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp GTTCCCATTCAAGAACCCTCAGGCCACCTGCTCTTGGAAGGACCCACGGAGTCTCCCAGCACCGCAATGTaGGGCAGGGGCCGGACAAAG +
Preference number: 4 (lower is better)
Translates to: VPIQEPSGHLLLEGPTESPSTAM*GRGRTK
Trigger: CTTTGTCCGGCCCCTGCCCCACATTGCGGTGCTGGG...AGACTCCGTGGGTCCTTCCAAGAGCAGGTGGCCTGAGGGTTCTTGAATGGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp AGGGGGTCAGCTGGCTTGGTTAAGCATGGATTTCCTTCCACACTACCCCTGCCCACACGTGGGCACAGCTaGGGCCGAAGCGACCCTGTG +
Preference number: 4 (lower is better)
Translates to: RGSAGLVKHGFPSTLPLPTRGHS*GRSDPV
Trigger: CACAGGGTCGCTTCGGCCCCAGCTGTGCCCACGTGT...GGGCAGGGGTAGTGTGGAAGGAAATCCATGCTTAACCAAGCCAGCTGACCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp TGGCCGACTGACTTGCTCCCCACTACTGGCCACACCACTGCGGCCTTTGAAGTGCACAGGGCACACCCGTaGGGCAGTTACACTGCTGCA +
Preference number: 4 (lower is better)
Translates to: WPTDLLPTTGHTTAAFEVHRAHP*GSYTAA
Trigger: TGCAGCAGTGTAACTGCCCCACGGGTGTGCCCTGTG...CACTTCAAAGGCCGCAGTGGTGTGGCCAGTAGTGGGGAGCAAGTCAGTCGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR TCA 90 bp TTTCCAGGTAAACAGTTGGCTGGCTGCAGCAGTCCATGGCCTAGCACCAGAAGGCCAGAGTGCAGGAGCTaGTGGCCAGGCAGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: FPGKQLAGCSSPWPSTRRPECRS*WPGRSC
Trigger: GCAGGACCTGCCTGGCCATCAGCTCCTGCACTCTGG...CCTTCTGGTGCTAGGCCATGGACTGCTGCAGCCAGCCAACTGTTTACCTGGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR TCA 90 bp CACCAGCAGAGGCCTGGGTCCCTTGGGCTGGAACACAGTAGTGGGCCTCTGTGGGTGAGCTGTACACACTaGTGCTGGCAGCCACCATTT +
Preference number: 4 (lower is better)
Translates to: HQQRPGSLGLEHSSGPLWVSCTH*CWQPPF
Trigger: AAATGGTGGCTGCCAGCATCAGTGTGTACAGCTCAC...CCACAGAGGCCCACTACTGTGTTCCAGCCCAAGGGACCCAGGCCTCTGCTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR TCA 90 bp CTGCTGGCTACAGCTGCTGCCTCTCTGCCTGTCACAGGACCGGTGATGCCCTGTCAGGTCCCACCATTCTaGCAGATGCAGGGAGAGCTA +
Preference number: 4 (lower is better)
Translates to: LLATAAASLPVTGPVMPCQVPPF*QMQGEL
Trigger: TAGCTCTCCCTGCATCTGTCAGAATGGTGGGACCTG...ACAGGGCATCACCGGTCCTGTGACAGGCAGAGAGGCAGCAGCTGTAGCCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR TCA 90 bp GAAGGACCCACGGAGTCTACAGAAAGCACAGAAACCCAGGCAATGGGGACACCAGCCCCCGTGACATGGTaGCAGGTGGCACCTTTCCGG +
Preference number: 4 (lower is better)
Translates to: EGPTESTESTETQAMGTPAPVTW*QVAPFR
Trigger: CCGGAAAGGTGCCACCTGTCACCATGTCACGGGGGC...TGGTGTCCCCATTGCCTGGGTTTCTGTGCTTTCTGTAGACTCCGTGGGTCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR TCA 90 bp CCATACTGCCTGCTTCACATTCACACAACGCTCCACCCCACTCTCTGCTCCATCAGAGGCAGGCCCCCGTaGCATGGTGACAGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: PYCLLHIHTTLHPTLCSIRGRPP*HGDRWH
Trigger: GTGCCACCTGTCACCATGTCACGGGGGCCTGCCTCT...GATGGAGCAGAGAGTGGGGTGGAGCGTTGTGTGAATGTGAAGCAGGCAGTATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR GCA 90 bp GTTCCCATTCAAGAACCCTCAGGCCACCTGCTCTTGGAAGGACCCACGGAGTCTCCTGGAAGCCGGCCTTaGAGGAGCAGCTGCCATCCT +
Preference number: 4 (lower is better)
Translates to: VPIQEPSGHLLLEGPTESPGSRP*RSSCHP
Trigger: AGGATGGCAGCTGCTCCTGCAAGGCCGGCTTCCAGG...AGACTCCGTGGGTCCTTCCAAGAGCAGGTGGCCTGAGGGTTCTTGAATGGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR GCA 90 bp AGGGGGTCAGCTGGCTTGGTTAAGCATGGATTTCCTTCCACACTACCCCTGCCCCCCCGGCGGAGCAGTTaGAGGCACTGCCACAGTCTA +
Preference number: 4 (lower is better)
Translates to: RGSAGLVKHGFPSTLPLPPRRSS*RHCHSL
Trigger: TAGACTGTGGCAGTGCCTGCAACTGCTCCGCCGGGG...GGGCAGGGGTAGTGTGGAAGGAAATCCATGCTTAACCAAGCCAGCTGACCCCCT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp GAAGGACCCACGGAGTCTACAGAAAGCACAGAAACCCAGGCAATGGGGACACCAGCTTGCACACAAGGCTaGCGGTGGCCCACCAGGGTC +
Preference number: 4 (lower is better)
Translates to: EGPTESTESTETQAMGTPACTQG*RWPTRV
Trigger: GACCCTGGTGGGCCACCGCCAGCCTTGTGTGCAAGC...TGGTGTCCCCATTGCCTGGGTTTCTGTGCTTTCTGTAGACTCCGTGGGTCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp TGGCCGACTGACTTGCTCCCCACTACTGGCCACACCACTGCGGCCTTTGAAGTGCAGTGCGAGCCTCTGTaGCATACACCTGCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: WPTDLLPTTGHTTAAFEVQCEPL*HTPACS
Trigger: GCTACAGGCAGGTGTATGCCACAGAGGCTCGCACTG...CACTTCAAAGGCCGCAGTGGTGTGGCCAGTAGTGGGGAGCAAGTCAGTCGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp ATCTTAGTCACCAGCAGAGGCCTGGGTCCCTTGGGCTGGAACACAGTAGTGGGCACGGTTTCTGCAGCCTaGCCCAAAGGAGCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: ILVTSRGLGPLGWNTVVGTVSAA*PKGAWL
Trigger: GAGCCAGGCTCCTTTGGGCCAGGCTGCAGAAACCGT...GCCCACTACTGTGTTCCAGCCCAAGGGACCCAGGCCTCTGCTGGTGACTAAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp GTTCCCATTCAAGAACCCTCAGGCCACCTGCTCTTGGAAGGACCCACGGAGTCTGTCACAGGCCACACCTaGCCGGCAGGTGCAACGGTT +
Preference number: 4 (lower is better)
Translates to: VPIQEPSGHLLLEGPTESVTGHT*PAGATV
Trigger: AACCGTTGCACCTGCCGGCCAGGTGTGGCCTGTGAC...AGACTCCGTGGGTCCTTCCAAGAGCAGGTGGCCTGAGGGTTCTTGAATGGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp TGGCCGACTGACTTGCTCCCCACTACTGGCCACACCACTGCGGCCTTTGAAGTGCGTCCAGTGGCCGGATaGCAATGCCCATCATTGGCA +
Preference number: 4 (lower is better)
Translates to: WPTDLLPTTGHTTAAFEVRPVAG*QCPSLA
Trigger: TGCCAATGATGGGCATTGCCATCCGGCCACTGGACG...CACTTCAAAGGCCGCAGTGGTGTGGCCAGTAGTGGGGAGCAAGTCAGTCGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp AAGTGCCACCTCTATCTTAGTCACCAGCAGAGGCCTGGGTCCCTTGGGCTGGAACAGGCCCCACTGACATaGTCACAGGTGGCCCCATGC +
Preference number: 4 (lower is better)
Translates to: KCHLYLSHQQRPGSLGLEQAPLT*SQVAPC
Trigger: GCATGGGGCCACCTGTGACCATGTCAGTGGGGCCTG...TTCCAGCCCAAGGGACCCAGGCCTCTGCTGGTGACTAAGATAGAGGTGGCACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR CAA 72 bp ACTTGCTCCCCACTACTGGCCACACCACTGCGGCCTTaGAAGTGTCCCTGGAGGTTTCAGCTGCCTCGGATG +
Preference number: 4 (lower is better)
Translates to: TCSPLLATPLRP*KCPWRFQLPRM
Trigger: CATCCGAGGCAGCTGAAACCTCCAGGGACACTTCAAAGGCCGCAGTGGTGTGGCCAGTAGTGGGGAGCAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR TCA 90 bp CCATACTGCCTGCTTCACATTCACACAACGCTCCACCCCACTCTCTGCTCCATCGTGTTGAGGCAGCCATaGGCACACTGGGCCAGACCC +
Preference number: 4 (lower is better)
Translates to: PYCLLHIHTTLHPTLCSIVLRQP*AHWARP
Trigger: GGGTCTGGCCCAGTGTGCTCATGGCTGCCTCAACAC...GATGGAGCAGAGAGTGGGGTGGAGCGTTGTGTGAATGTGAAGCAGGCAGTATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR TCA 90 bp ATCTTAGTCACCAGCAGAGGCCTGGGTCCCTTGGGCTGGAACACAGTAGTGGGCAGGACCCCTGAGTGTTaGGGCAGCCATGAGCACACT +
Preference number: 4 (lower is better)
Translates to: ILVTSRGLGPLGWNTVVGRTPEC*GSHEHT
Trigger: AGTGTGCTCATGGCTGCCTCAACACTCAGGGGTCCT...GCCCACTACTGTGTTCCAGCCCAAGGGACCCAGGCCTCTGCTGGTGACTAAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR TCA 90 bp CCATACTGCCTGCTTCACATTCACACAACGCTCCACCCCACTCTCTGCTCCATCCTGACGCAGGGGCTCTaGCACTTGTCCCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: PYCLLHIHTTLHPTLCSILTQGL*HLSPVQ
Trigger: CTGGACTGGGGACAAGTGTCAGAGCCCCTGCGTCAG...GATGGAGCAGAGAGTGGGGTGGAGCGTTGTGTGAATGTGAAGCAGGCAGTATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR TCA 90 bp GCTCCCTCTGGGACATTGTTCTGTAGTCTCTGGAGGTGTCTCAGGCATCAATGTCACAGCCAGGCCCAGTaGAGCCGGGTGGACAGTGGC +
Preference number: 4 (lower is better)
Translates to: APSGTLFCSLWRCLRHQCHSQAQ*SRVDSG
Trigger: GCCACTGTCCACCCGGCTTCACTGGGCCTGGCTGTG...ACATTGATGCCTGAGACACCTCCAGAGACTACAGAACAATGTCCCAGAGGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR GCA 90 bp GAAGGACCCACGGAGTCTACAGAAAGCACAGAAACCCAGGCAATGGGGACACCATTGGCCAACACACCATaGCTGCTGCCCGCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: EGPTESTESTETQAMGTPLANTP*LLPAAR
Trigger: TCGGGCTGCGGGCAGCAGGCATGGTGTGTTGGCCAA...TGGTGTCCCCATTGCCTGGGTTTCTGTGCTTTCTGTAGACTCCGTGGGTCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR GCA 90 bp ATCTTAGTCACCAGCAGAGGCCTGGGTCCCTTGGGCTGGAACACAGTAGTGGGCGTGTTGGCACACACCTaGTGGCAGCACGGAGAGTTG +
Preference number: 4 (lower is better)
Translates to: ILVTSRGLGPLGWNTVVGVLAHT*WQHGEL
Trigger: CAACTCTCCGTGCTGCCAGCAGGTGTGTGCCAACAC...GCCCACTACTGTGTTCCAGCCCAAGGGACCCAGGCCTCTGCTGGTGACTAAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR GCA 90 bp ATGCTGCCTGTCCATCACTGTGTTGAGGCAGGGGGTCAGCTGGCTTGGTTAAGCAGTCCTTGCCAAAGGTaGCAGGCTGGCAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: MLPVHHCVEAGGQLAWLSSPCQR*QAGRPA
Trigger: AGCAGGCCTGCCAGCCTGGCACCTTTGGCAAGGACT...GCTTAACCAAGCCAGCTGACCCCCTGCCTCAACACAGTGATGGACAGGCAGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR GCA 90 bp TGGCCGACTGACTTGCTCCCCACTACTGGCCACACCACTGCGGCCTTTGAAGTGACAGGCCCCCATTCCTaGAGGCACACTTGTGTTCAC +
Preference number: 4 (lower is better)
Translates to: WPTDLLPTTGHTTAAFEVTGPHS*RHTCVH
Trigger: GTGAACACAAGTGTGCCTGCAGGAATGGGGGCCTGT...CACTTCAAAGGCCGCAGTGGTGTGGCCAGTAGTGGGGAGCAAGTCAGTCGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp GGAAGGACCCACGGAGTCTACAGAAAGCACAGAAACCCAGGCAATGGGGACACCGTCCTGCCATCTGTGTaGAGCCGGAAGCCGGGTTTG +
Preference number: 4 (lower is better)
Translates to: GRTHGVYRKHRNPGNGDTVLPSV*SRKPGL
Trigger: CAAACCCGGCTTCCGGCTCCACACAGATGGCAGGAC...GGTGTCCCCATTGCCTGGGTTTCTGTGCTTTCTGTAGACTCCGTGGGTCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp AAGTGCCACCTCTATCTTAGTCACCAGCAGAGGCCTGGGTCCCTTGGGCTGGAAAGCAAGCTGGTAACCTaGGTGGCAGCCACAGTGGGC +
Preference number: 4 (lower is better)
Translates to: KCHLYLSHQQRPGSLGLESKLVT*VAATVG
Trigger: GCCCACTGTGGCTGCCACCCAGGTTACCAGCTTGCT...TTCCAGCCCAAGGGACCCAGGCCTCTGCTGGTGACTAAGATAGAGGTGGCACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp TTTCCAGGTAAACAGTTGGCTGGCTGCAGCAGTCCATGGCCTAGCACCAGAAGGCAGCCATCCTCACAGTaGGCTCCACTGACGCCTGGG +
Preference number: 4 (lower is better)
Translates to: FPGKQLAGCSSPWPSTRRQPSSQ*APLTPG
Trigger: CCCAGGCGTCAGTGGAGCCCACTGTGAGGATGGCTG...CCTTCTGGTGCTAGGCCATGGACTGCTGCAGCCAGCCAACTGTTTACCTGGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp ATCTTAGTCACCAGCAGAGGCCTGGGTCCCTTGGGCTGGAACACAGTAGTGGGCTCTCAGGGTCGCAGCTaGCACCATGCTCACATGCAG +
Preference number: 4 (lower is better)
Translates to: ILVTSRGLGPLGWNTVVGSQGRS*HHAHMQ
Trigger: CTGCATGTGAGCATGGTGCCAGCTGCGACCCTGAGA...GCCCACTACTGTGTTCCAGCCCAAGGGACCCAGGCCTCTGCTGGTGACTAAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp TTTCCAGGTAAACAGTTGGCTGGCTGCAGCAGTCCATGGCCTAGCACCAGAAGGCCCAAACCAGCCTGCTaGGCAAGCATCCTGGCAGCG +
Preference number: 4 (lower is better)
Translates to: FPGKQLAGCSSPWPSTRRPKPAC*ASILAA
Trigger: CGCTGCCAGGATGCTTGCCCAGCAGGCTGGTTTGGG...CCTTCTGGTGCTAGGCCATGGACTGCTGCAGCCAGCCAACTGTTTACCTGGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp GAAGGACCCACGGAGTCTACAGAAAGCACAGAAACCCAGGCAATGGGGACACCACAGCCAGGAGCACAGTaGCACTGCCCAAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: EGPTESTESTETQAMGTPQPGAQ*HCPRTG
Trigger: CCCTGTCCTTGGGCAGTGCCACTGTGCTCCTGGCTG...TGGTGTCCCCATTGCCTGGGTTTCTGTGCTTTCTGTAGACTCCGTGGGTCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp CCATACTGCCTGCTTCACATTCACACAACGCTCCACCCCACTCTCTGCTCCATCGCAGGCTCCCGTGGCTaGATCGCAGGTCCCACCATT +
Preference number: 4 (lower is better)
Translates to: PYCLLHIHTTLHPTLCSIAGSRG*IAGPTI
Trigger: AATGGTGGGACCTGCGATCCAGCCACGGGAGCCTGC...GATGGAGCAGAGAGTGGGGTGGAGCGTTGTGTGAATGTGAAGCAGGCAGTATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp GTTCCCATTCAAGAACCCTCAGGCCACCTGCTCTTGGAAGGACCCACGGAGTCTTCGCAGAACTGGCCATaGAAGCCAGCAGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: VPIQEPSGHLLLEGPTESSQNWP*KPAGQR
Trigger: CCTCTGCCCTGCTGGCTTCCATGGCCAGTTCTGCGA...AGACTCCGTGGGTCCTTCCAAGAGCAGGTGGCCTGAGGGTTCTTGAATGGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR TCA 90 bp TTTCCAGGTAAACAGTTGGCTGGCTGCAGCAGTCCATGGCCTAGCACCAGAAGGTGTTCGCAGCCGCTGTaGCCAGAGGCACACTCGTCA +
Preference number: 4 (lower is better)
Translates to: FPGKQLAGCSSPWPSTRRCSQPL*PEAHSS
Trigger: TGACGAGTGTGCCTCTGGTCACAGCGGCTGCGAACA...CCTTCTGGTGCTAGGCCATGGACTGCTGCAGCCAGCCAACTGTTTACCTGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR TCA 90 bp ATCTTAGTCACCAGCAGAGGCCTGGGTCCCTTGGGCTGGAACACAGTAGTGGGCAAGTCTCATTGCAGATaGTCCCGGTCCAGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: ILVTSRGLGPLGWNTVVGKSHCR*SRSSPL
Trigger: CAGAGGGCTGGACCGGGATCATCTGCAATGAGACTT...GCCCACTACTGTGTTCCAGCCCAAGGGACCCAGGCCTCTGCTGGTGACTAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR GCA 90 bp TGGCCGACTGACTTGCTCCCCACTACTGGCCACACCACTGCGGCCTTTGAAGTGCATCTTGGCACGTTTTaGCATCACCCTGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: WPTDLLPTTGHTTAAFEVHLGTF*HHPAAG
Trigger: ACCAGCTGCAGGGTGATGGCAAAACGTGCCAAGATG...CACTTCAAAGGCCGCAGTGGTGTGGCCAGTAGTGGGGAGCAAGTCAGTCGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR GCA 90 bp CCATACTGCCTGCTTCACATTCACACAACGCTCCACCCCACTCTCTGCTCCATCTCCCATGGCCTGCACTaGAGTTGCAGGGGTGGATGC +
Preference number: 4 (lower is better)
Translates to: PYCLLHIHTTLHPTLCSISHGLH*SCRGGC
Trigger: GCATCCACCCCTGCAACTGCAGTGCAGGCCATGGGA...GATGGAGCAGAGAGTGGGGTGGAGCGTTGTGTGAATGTGAAGCAGGCAGTATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR GCA 90 bp TGGCCGACTGACTTGCTCCCCACTACTGGCCACACCACTGCGGCCTTTGAAGTGAGGTGGGCTCACAGCTaGCATTGTTCTGACAGGAAC +
Preference number: 4 (lower is better)
Translates to: WPTDLLPTTGHTTAAFEVRWAHS*HCSDRN
Trigger: GTTCCTGTCAGAACAATGGCAGCTGTGAGCCCACCT...CACTTCAAAGGCCGCAGTGGTGTGGCCAGTAGTGGGGAGCAAGTCAGTCGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR GCA 90 bp TTTCCAGGTAAACAGTTGGCTGGCTGCAGCAGTCCATGGCCTAGCACCAGAAGGGCTTCATGGCCTTGCTaGTGGAGTGCTGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: FPGKQLAGCSSPWPSTRRASWPC*WSAGVL
Trigger: CAGCACCCCAGCACTCCAGCAGCAAGGCCATGAAGC...CCTTCTGGTGCTAGGCCATGGACTGCTGCAGCCAGCCAACTGTTTACCTGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp ACACAACGCTCCACCCCACTCTCTGCTCCATCCCTCTGCTTTAACCTAAGTCTCGAGAGGCAGCCTTCCTaGCCAGGCTTCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: TQRSTPLSAPSLCFNLSLERQPS*PGFWLQ
Trigger: CTGGAGCCAGAAGCCTGGCCAGGAAGGCTGCCTCTC...GAGACTTAGGTTAAAGCAGAGGGATGGAGCAGAGAGTGGGGTGGAGCGTTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp AAGTGCCACCTCTATCTTAGTCACCAGCAGAGGCCTGGGTCCCTTGGGCTGGAATGCCGTAGAAGCCCTTaGGGCAGCCATCCTCACAGT +
Preference number: 4 (lower is better)
Translates to: KCHLYLSHQQRPGSLGLECRRSP*GSHPHS
Trigger: ACTGTGAGGATGGCTGCCCCAAGGGCTTCTACGGCA...TTCCAGCCCAAGGGACCCAGGCCTCTGCTGGTGACTAAGATAGAGGTGGCACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp CTGCTGGCTACAGCTGCTGCCTCTCTGCCTGTCACAGGACCGGTGATGCCCTGTGGCAATGCCCATCATTaGCACAAGCACACCTCATCT +
Preference number: 4 (lower is better)
Translates to: LLATAAASLPVTGPVMPCGNAHH*HKHTSS
Trigger: AGATGAGGTGTGCTTGTGCCAATGATGGGCATTGCC...ACAGGGCATCACCGGTCCTGTGACAGGCAGAGAGGCAGCAGCTGTAGCCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp TTTCCAGGTAAACAGTTGGCTGGCTGCAGCAGTCCATGGCCTAGCACCAGAAGGCTGTCACAGGCTCTCTaGCAGCTGAGGCCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: FPGKQLAGCSSPWPSTRRLSQAL*QLRPVH
Trigger: GTGGACTGGCCTCAGCTGCCAGAGAGCCTGTGACAG...CCTTCTGGTGCTAGGCCATGGACTGCTGCAGCCAGCCAACTGTTTACCTGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp GTTCCCATTCAAGAACCCTCAGGCCACCTGCTCTTGGAAGGACCCACGGAGTCTGCGTCACAGTTCCCATaGCCTGCACTGCAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: VPIQEPSGHLLLEGPTESASQFP*PALQLQ
Trigger: CTGCAACTGCAGTGCAGGCCATGGGAACTGTGACGC...AGACTCCGTGGGTCCTTCCAAGAGCAGGTGGCCTGAGGGTTCTTGAATGGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp GCTCCCTCTGGGACATTGTTCTGTAGTCTCTGGAGGTGTCTCAGGCATCAATGTTCCCCTCCAGCCAGCTaGGCAGGTACAGGCCCCACT +
Preference number: 4 (lower is better)
Translates to: APSGTLFCSLWRCLRHQCSPPAS*AGTGPT
Trigger: AGTGGGGCCTGTACCTGCCCAGCTGGCTGGAGGGGA...ACATTGATGCCTGAGACACCTCCAGAGACTACAGAACAATGTCCCAGAGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp CCATACTGCCTGCTTCACATTCACACAACGCTCCACCCCACTCTCTGCTCCATCTGGCAACCAGATCCATaGAAGCCGGCAGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: PYCLLHIHTTLHPTLCSIWQPDP*KPAGQV
Trigger: CACCTGCCCTGCCGGCTTCCATGGATCTGGTTGCCA...GATGGAGCAGAGAGTGGGGTGGAGCGTTGTGTGAATGTGAAGCAGGCAGTATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR CAA 72 bp ACAGTGGCCCGAAGCCCAGCCGACTTCCTGGATTCCTaGTGTCCAAAGGAGGCCTTCTTCCCCATGACCATG +
Preference number: 4 (lower is better)
Translates to: TVARSPADFLDS*CPKEAFFPMTM
Trigger: CATGGTCATGGGGAAGAAGGCCTCCTTTGGACACAAGGAATCCAGGAAGTCGGCTGGGCTTCGGGCCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR TCA 90 bp TTTCCAGGTAAACAGTTGGCTGGCTGCAGCAGTCCATGGCCTAGCACCAGAAGGCTGCCATTGGTAGCATaGCACAGGCCCCCATTCCTG +
Preference number: 4 (lower is better)
Translates to: FPGKQLAGCSSPWPSTRRLPLVA*HRPPFL
Trigger: CAGGAATGGGGGCCTGTGTCATGCTACCAATGGCAG...CCTTCTGGTGCTAGGCCATGGACTGCTGCAGCCAGCCAACTGTTTACCTGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR GCA 90 bp GTTCCCATTCAAGAACCCTCAGGCCACCTGCTCTTGGAAGGACCCACGGAGTCTGGTCAGCTTCTGTTCTaGACACACGTGGGGCATGCT +
Preference number: 4 (lower is better)
Translates to: VPIQEPSGHLLLEGPTESGQLLF*THVGHA
Trigger: AGCATGCCCCACGTGTGTGCAGAACAGAAGCTGACC...AGACTCCGTGGGTCCTTCCAAGAGCAGGTGGCCTGAGGGTTCTTGAATGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR GCA 90 bp CTCCCTCTGGGACATTGTTCTGTAGTCTCTGGAGGTGTCTCAGGCATCAATGTGCGGCACTGGCAGCGGTaGTGTGTCACGGTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: LPLGHCSVVSGGVSGINVRHWQR*CVTVSC
Trigger: ACAGCTCACCGTGACACAGCACCGCTGCCAGTGCCG...CACATTGATGCCTGAGACACCTCCAGAGACTACAGAACAATGTCCCAGAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR GCA 90 bp CTGCTGGCTACAGCTGCTGCCTCTCTGCCTGTCACAGGACCGGTGATGCCCTGTACCCAGCTCATAGCCTaGGTGACACACACACTTAAA +
Preference number: 4 (lower is better)
Translates to: LLATAAASLPVTGPVMPCTQLIA*VTHTLK
Trigger: TTTAAGTGTGTGTGTCACGCAGGCTATGAGCTGGGT...ACAGGGCATCACCGGTCCTGTGACAGGCAGAGAGGCAGCAGCTGTAGCCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR GCA 90 bp TTTCCAGGTAAACAGTTGGCTGGCTGCAGCAGTCCATGGCCTAGCACCAGAAGGAGGTGCAACGGTTTCTaGAGCCTGGCCCAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: FPGKQLAGCSSPWPSTRRRCNGF*SLAQRS
Trigger: GCTCCTTTGGGCCAGGCTGCAGAAACCGTTGCACCT...CCTTCTGGTGCTAGGCCATGGACTGCTGCAGCCAGCCAACTGTTTACCTGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR GCA 90 bp ATCTTAGTCACCAGCAGAGGCCTGGGTCCCTTGGGCTGGAACACAGTAGTGGGCAATGCTGACAGTTCTTaGCATACAGGCCAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: ILVTSRGLGPLGWNTVVGNADSS*HTGQQG
Trigger: GCCCTGCTGGCCTGTATGGCAAGAACTGTCAGCATT...GCCCACTACTGTGTTCCAGCCCAAGGGACCCAGGCCTCTGCTGGTGACTAAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp AGGGGGTCAGCTGGCTTGGTTAAGCATGGATTTCCTTCCACACTACCCCTGCCCCCTCACAGCCCCCGTTaGCATTGGCACATTCATCCA +
Preference number: 4 (lower is better)
Translates to: RGSAGLVKHGFPSTLPLPPHSPR*HWHIHP
Trigger: TGGATGAATGTGCCAATGCCAACGGGGGCTGTGAGG...GGGCAGGGGTAGTGTGGAAGGAAATCCATGCTTAACCAAGCCAGCTGACCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR TCA 90 bp ATCTTAGTCACCAGCAGAGGCCTGGGTCCCTTGGGCTGGAACACAGTAGTGGGCAGACAAACTTCTCAGTaGGAGTGTGTTCTCCCCGCA +
Preference number: 4 (lower is better)
Translates to: ILVTSRGLGPLGWNTVVGRQTSQ*ECVLPA
Trigger: TGCGGGGAGAACACACTCTCACTGAGAAGTTTGTCT...GCCCACTACTGTGTTCCAGCCCAAGGGACCCAGGCCTCTGCTGGTGACTAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR TCA 90 bp GTTCCCATTCAAGAACCCTCAGGCCACCTGCTCTTGGAAGGACCCACGGAGTCTGCAGGAGCAGGAACCTaGGCAGTTCACACCAAATGT +
Preference number: 4 (lower is better)
Translates to: VPIQEPSGHLLLEGPTESAGAGT*AVHTKC
Trigger: ACATTTGGTGTGAACTGCTCAGGTTCCTGCTCCTGC...AGACTCCGTGGGTCCTTCCAAGAGCAGGTGGCCTGAGGGTTCTTGAATGGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR TCA 90 bp ATCCATAGCTGTCCACAGCAATCCATGGCTTTCCAGAAGAGGTGTGGATCCAAAGCAGGGCAGATCTCTTaGCAGCCGAGCCCCCAACGG +
Preference number: 4 (lower is better)
Translates to: IHSCPQQSMAFQKRCGSKAGQIS*QPSPQR
Trigger: CCGTTGGGGGCTCGGCTGTCAAGAGATCTGCCCTGC...TTTGGATCCACACCTCTTCTGGAAAGCCATGGATTGCTGTGGACAGCTATGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR GCA 90 bp CTGGAGGTGTCTCAGGCATCAATGTGTTCTCTGGAACAATTCACCTTGACAGGCTGGCCAGGCAGGTCCTaGCATCTGTGTGGAGCCGGA +
Preference number: 4 (lower is better)
Translates to: LEVSQASMCSLEQFTLTGWPGRS*HLCGAG
Trigger: TCCGGCTCCACACAGATGGCAGGACCTGCCTGGCCA...GCCTGTCAAGGTGAATTGTTCCAGAGAACACATTGATGCCTGAGACACCTCCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR GCA 90 bp CTGAAGCATTACATTACATGCATGTCATTACAGAGGGGTACAGGAGGTTCCCATGGGGCGTGCAGCCCCTaGGGTCCTCATCCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: LKHYITCMSLQRGTGGSHGACSP*GPHPAG
Trigger: ACCGGCTGGATGAGGACCGCAGGGGCTGCACGCCCC...ATGGGAACCTCCTGTACCCCTCTGTAATGACATGCATGTAATGTAATGCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR GCA 90 bp GCTCCCTCTGGGACATTGTTCTGTAGTCTCTGGAGGTGTCTCAGGCATCAATGTGGCCTGCACTGCAGTTaGAGGGGTGGATGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: APSGTLFCSLWRCLRHQCGLHCS*RGGCSQ
Trigger: CTGACTGCATCCACCCCTGCAACTGCAGTGCAGGCC...ACATTGATGCCTGAGACACCTCCAGAGACTACAGAACAATGTCCCAGAGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR GCA 90 bp GCTCCCTCTGGGACATTGTTCTGTAGTCTCTGGAGGTGTCTCAGGCATCAATGTGGTGCTCACAGTCCTTaGCAAAGGTGCCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: APSGTLFCSLWRCLRHQCGAHSP*QRCQAG
Trigger: GCCAGCCTGGCACCTTTGGCAAGGACTGTGAGCACC...ACATTGATGCCTGAGACACCTCCAGAGACTACAGAACAATGTCCCAGAGGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR GCA 90 bp CTCCCTCTGGGACATTGTTCTGTAGTCTCTGGAGGTGTCTCAGGCATCAATGTGTCCCGGGAGGACAGATaGAAGTCCCCGACACTGGGT +
Preference number: 4 (lower is better)
Translates to: LPLGHCSVVSGGVSGINVSREDR*KSPTLG
Trigger: ACCCAGTGTCGGGGACTTGCATCTGTCCTCCCGGGA...CACATTGATGCCTGAGACACCTCCAGAGACTACAGAACAATGTCCCAGAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR GCA 90 bp ACACAACGCTCCACCCCACTCTCTGCTCCATCCCTCTGCTTTAACCTAAGTCTCGTGGGGCAGTTACACTaGTGCAGGCAGCCATCTCCA +
Preference number: 4 (lower is better)
Translates to: TQRSTPLSAPSLCFNLSLVGQLH*CRQPSP
Trigger: TGGAGATGGCTGCCTGCAGCAGTGTAACTGCCCCAC...GAGACTTAGGTTAAAGCAGAGGGATGGAGCAGAGAGTGGGGTGGAGCGTTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp ATCCATAGCTGTCCACAGCAATCCATGGCTTTCCAGAAGAGGTGTGGATCCAAACCCAGTCCAGCCAGTTaGGCAGCGGCAGTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: IHSCPQQSMAFQKRCGSKPSPAS*AAAVAS
Trigger: ACTGGCCACTGCCGCTGCCCAACTGGCTGGACTGGG...TTTGGATCCACACCTCTTCTGGAAAGCCATGGATTGCTGTGGACAGCTATGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp CTCCCTCTGGGACATTGTTCTGTAGTCTCTGGAGGTGTCTCAGGCATCAATGTGCACTCTCCAGAGACATaGTGGCAGGAGGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: LPLGHCSVVSGGVSGINVHSPET*WQEAPG
Trigger: GCCTGGTGCCTCCTGCCACCATGTCTCTGGAGAGTG...CACATTGATGCCTGAGACACCTCCAGAGACTACAGAACAATGTCCCAGAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp ATCCATAGCTGTCCACAGCAATCCATGGCTTTCCAGAAGAGGTGTGGATCCAAAGGTTCCTGCACGCCCTaGTGGGCAAAGGCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: IHSCPQQSMAFQKRCGSKGSCTP*WAKAEA
Trigger: GGCCTCTGCCTTTGCCCACCAGGGCGTGCAGGAACC...TTTGGATCCACACCTCTTCTGGAAAGCCATGGATTGCTGTGGACAGCTATGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR TCA 90 bp AGGGGGTCAGCTGGCTTGGTTAAGCATGGATTTCCTTCCACACTACCCCTGCCCTCATGGCCGAAGGAGTaGTCCAAGCAGACAAACTTC +
Preference number: 4 (lower is better)
Translates to: RGSAGLVKHGFPSTLPLPSWPKE*SKQTNF
Trigger: GAAGTTTGTCTGCTTGGATCACTCCTTCGGCCATGA...GGGCAGGGGTAGTGTGGAAGGAAATCCATGCTTAACCAAGCCAGCTGACCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR TCA 90 bp GGTGCTTTAGAATTCCTCCTTCGTCCCCATACTGCCTGCTTCACATTCACACAAAGGTACAGGCCCCACTaGCATGGTCACAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: GALEFLLRPHTACFTFTQRYRPH*HGHRWP
Trigger: GGGCCACCTGTGACCATGTCAGTGGGGCCTGTACCT...TTGTGTGAATGTGAAGCAGGCAGTATGGGGACGAAGGAGGAATTCTAAAGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR GCA 90 bp CTGAAGCATTACATTACATGCATGTCATTACAGAGGGGTACAGGAGGTTCCCATCGCCTGCCATCCTCCTaGAGCTGGTACTGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: LKHYITCMSLQRGTGGSHRLPSS*SWYWGR
Trigger: CCGGCCCCAGTACCAGCTGCAGGAGGATGGCAGGCG...ATGGGAACCTCCTGTACCCCTCTGTAATGACATGCATGTAATGTAATGCTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR GCA 90 bp CTCCCTCTGGGACATTGTTCTGTAGTCTCTGGAGGTGTCTCAGGCATCAATGTGGCATACAGCCACCATTaGCGTCTGCACAGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: LPLGHCSVVSGGVSGINVAYSHH*RLHRGF
Trigger: GAAGCCCCTGTGCAGACGGCAATGGTGGCTGTATGC...CACATTGATGCCTGAGACACCTCCAGAGACTACAGAACAATGTCCCAGAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR GCA 90 bp AGGGGGTCAGCTGGCTTGGTTAAGCATGGATTTCCTTCCACACTACCCCTGCCCAGTTCCTGGCATGTATaGATACAGCCACCATTGCCG +
Preference number: 4 (lower is better)
Translates to: RGSAGLVKHGFPSTLPLPSSWHV*IQPPLP
Trigger: CGGCAATGGTGGCTGTATGCATACATGCCAGGAACT...GGGCAGGGGTAGTGTGGAAGGAAATCCATGCTTAACCAAGCCAGCTGACCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR GCA 90 bp ACACAACGCTCCACCCCACTCTCTGCTCCATCCCTCTGCTTTAACCTAAGTCTCGTGGCCGGATGGCAATaGCCATCATTGGCACAAGCA +
Preference number: 4 (lower is better)
Translates to: TQRSTPLSAPSLCFNLSLVAGWQ*PSLAQA
Trigger: TGCTTGTGCCAATGATGGGCATTGCCATCCGGCCAC...GAGACTTAGGTTAAAGCAGAGGGATGGAGCAGAGAGTGGGGTGGAGCGTTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp CTGAAGCATTACATTACATGCATGTCATTACAGAGGGGTACAGGAGGTTCCCATTCCTGCAGCTGGTACTaGGGCCGGCACTGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: LKHYITCMSLQRGTGGSHSCSWY*GRHWQR
Trigger: CCGCTGCCAGTGCCGGCCCCAGTACCAGCTGCAGGA...ATGGGAACCTCCTGTACCCCTCTGTAATGACATGCATGTAATGTAATGCTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp GGTGCTTTAGAATTCCTCCTTCGTCCCCATACTGCCTGCTTCACATTCACACAACTCCCCAGTCTTCCCTaGTGGGCACAGACACTCCCC +
Preference number: 4 (lower is better)
Translates to: GALEFLLRPHTACFTFTQLPSLP*WAQTLP
Trigger: GGGGAGTGTCTGTGCCCACCAGGGAAGACTGGGGAG...TTGTGTGAATGTGAAGCAGGCAGTATGGGGACGAAGGAGGAATTCTAAAGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp GGTGCTTTAGAATTCCTCCTTCGTCCCCATACTGCCTGCTTCACATTCACACAACTGCAGTTGCAGGGGTaGATGCAGTCAGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: GALEFLLRPHTACFTFTQLQLQG*MQSGPQ
Trigger: CTGGGGGCCTGACTGCATCCACCCCTGCAACTGCAG...TTGTGTGAATGTGAAGCAGGCAGTATGGGGACGAAGGAGGAATTCTAAAGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp CTGGAGGTGTCTCAGGCATCAATGTGTTCTCTGGAACAATTCACCTTGACAGGCCCCAGTGAAGCCGGGTaGACAGTGGCACTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: LEVSQASMCSLEQFTLTGPSEAG*TVALSR
Trigger: TCTGGAGAGTGCCACTGTCCACCCGGCTTCACTGGG...GCCTGTCAAGGTGAATTGTTCCAGAGAACACATTGATGCCTGAGACACCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR CAA 72 bp GAGGTTCCCATTCAAGAACCCTCAGGCCACCTGCTCTaGGAAGGACCCACGGAGTCTACAGAAAGCACAGAA +
Preference number: 4 (lower is better)
Translates to: EVPIQEPSGHLL*EGPTESTESTE
Trigger: TTCTGTGCTTTCTGTAGACTCCGTGGGTCCTTCCAAGAGCAGGTGGCCTGAGGGTTCTTGAATGGGAACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR TCA 90 bp ATGCTGCCTGTCCATCACTGTGTTGAGGCAGGGGGTCAGCTGGCTTGGTTAAGCACAAGATCTTGTGTGTaGCTGCTCACAAAGGCAGTC +
Preference number: 4 (lower is better)
Translates to: MLPVHHCVEAGGQLAWLSTRSCV*LLTKAV
Trigger: GACTGCCTTTGTGAGCAGTCACACACAAGATCTTGT...GCTTAACCAAGCCAGCTGACCCCCTGCCTCAACACAGTGATGGACAGGCAGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR TCA 90 bp CCATACTGCCTGCTTCACATTCACACAACGCTCCACCCCACTCTCTGCTCCATCCAGAGACAGGAATGCTaGCAGTTCTTGCCATACAGG +
Preference number: 4 (lower is better)
Translates to: PYCLLHIHTTLHPTLCSIQRQEC*QFLPYR
Trigger: CCTGTATGGCAAGAACTGTCAGCATTCCTGTCTCTG...GATGGAGCAGAGAGTGGGGTGGAGCGTTGTGTGAATGTGAAGCAGGCAGTATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR GCA 90 bp GGTGCTTTAGAATTCCTCCTTCGTCCCCATACTGCCTGCTTCACATTCACACAAACAGTTCCCATGGCCTaGACTGCAGTTGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: GALEFLLRPHTACFTFTQTVPMA*TAVAGV
Trigger: CACCCCTGCAACTGCAGTGCAGGCCATGGGAACTGT...TTGTGTGAATGTGAAGCAGGCAGTATGGGGACGAAGGAGGAATTCTAAAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR GCA 90 bp ATCCATAGCTGTCCACAGCAATCCATGGCTTTCCAGAAGAGGTGTGGATCCAAAGTCACATGTGGTTCCTaGACGCCCTGGTGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: IHSCPQQSMAFQKRCGSKVTCGS*TPWWAK
Trigger: CTTTGCCCACCAGGGCGTGCAGGAACCACATGTGAC...TTTGGATCCACACCTCTTCTGGAAAGCCATGGATTGCTGTGGACAGCTATGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR GCA 90 bp ATCCATAGCTGTCCACAGCAATCCATGGCTTTCCAGAAGAGGTGTGGATCCAAAGCCTTGCTGCTGGAGTaGTGGGGTGCTGGTCTGATA +
Preference number: 4 (lower is better)
Translates to: IHSCPQQSMAFQKRCGSKALLLE*WGAGLI
Trigger: TATCAGACCAGCACCCCAGCACTCCAGCAGCAAGGC...TTTGGATCCACACCTCTTCTGGAAAGCCATGGATTGCTGTGGACAGCTATGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp CTCCCTCTGGGACATTGTTCTGTAGTCTCTGGAGGTGTCTCAGGCATCAATGTGAGCCCCCGTTGGCATTaGCACATTCATCCACATCTG +
Preference number: 4 (lower is better)
Translates to: LPLGHCSVVSGGVSGINVSPRWH*HIHPHL
Trigger: CAGATGTGGATGAATGTGCCAATGCCAACGGGGGCT...CACATTGATGCCTGAGACACCTCCAGAGACTACAGAACAATGTCCCAGAGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp AGGGGGTCAGCTGGCTTGGTTAAGCATGGATTTCCTTCCACACTACCCCTGCCCCTTCCCAAAAGTGTCTaGAGGACAAGTCTCATTGCA +
Preference number: 4 (lower is better)
Translates to: RGSAGLVKHGFPSTLPLPLPKSV*RTSLIA
Trigger: TGCAATGAGACTTGTCCTCCAGACACTTTTGGGAAG...GGGCAGGGGTAGTGTGGAAGGAAATCCATGCTTAACCAAGCCAGCTGACCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp ATCCATAGCTGTCCACAGCAATCCATGGCTTTCCAGAAGAGGTGTGGATCCAAACCCAAAGGTGAGAGGTaGGCAAGTCTGGGCACAGTG +
Preference number: 4 (lower is better)
Translates to: IHSCPQQSMAFQKRCGSKPKGER*ASLGTV
Trigger: CACTGTGCCCAGACTTGCCCACCTCTCACCTTTGGG...TTTGGATCCACACCTCTTCTGGAAAGCCATGGATTGCTGTGGACAGCTATGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp GGTGCTTTAGAATTCCTCCTTCGTCCCCATACTGCCTGCTTCACATTCACACAAGTTGGGCAGCGGCAGTaGCCAGTAAGACGGTCACAT +
Preference number: 4 (lower is better)
Translates to: GALEFLLRPHTACFTFTQVGQRQ*PVRRSH
Trigger: ATGTGACCGTCTTACTGGCCACTGCCGCTGCCCAAC...TTGTGTGAATGTGAAGCAGGCAGTATGGGGACGAAGGAGGAATTCTAAAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp CTCCCTCTGGGACATTGTTCTGTAGTCTCTGGAGGTGTCTCAGGCATCAATGTGAATTTGTTCACAGCCTaGCCCATAGCGCCCAGATGG +
Preference number: 4 (lower is better)
Translates to: LPLGHCSVVSGGVSGINVNLFTA*PIAPRW
Trigger: CCATCTGGGCGCTATGGGCCAGGCTGTGAACAAATT...CACATTGATGCCTGAGACACCTCCAGAGACTACAGAACAATGTCCCAGAGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR TCA 90 bp GAAGGACCCACGGAGTCTACAGAAAGCACAGAAACCCAGGCAATGGGGACACCAACAACCACCATTGTGTaGTCGACATTCATCCACATC +
Preference number: 4 (lower is better)
Translates to: EGPTESTESTETQAMGTPTTTIV*STFIHI
Trigger: GATGTGGATGAATGTCGATCACACAATGGTGGTTGT...TGGTGTCCCCATTGCCTGGGTTTCTGTGCTTTCTGTAGACTCCGTGGGTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR TCA 90 bp CTGAAGCATTACATTACATGCATGTCATTACAGAGGGGTACAGGAGGTTCCCATAAAGGCAGAGGCCGCTaGTGGGATCACAGGGCACAC +
Preference number: 4 (lower is better)
Translates to: LKHYITCMSLQRGTGGSHKGRGR*WDHRAH
Trigger: GTGTGCCCTGTGATCCCATCAGCGGCCTCTGCCTTT...ATGGGAACCTCCTGTACCCCTCTGTAATGACATGCATGTAATGTAATGCTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR GCA 90 bp CTGGAGGTGTCTCAGGCATCAATGTGTTCTCTGGAACAATTCACCTTGACAGGCCCTTGCAGGAGCAGCTaGCATCCTTCGAGTTACAAG +
Preference number: 4 (lower is better)
Translates to: LEVSQASMCSLEQFTLTGPCRSS*HPSSYK
Trigger: CTTGTAACTCGAAGGATGGCAGCTGCTCCTGCAAGG...GCCTGTCAAGGTGAATTGTTCCAGAGAACACATTGATGCCTGAGACACCTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR GCA 90 bp CTCCCTCTGGGACATTGTTCTGTAGTCTCTGGAGGTGTCTCAGGCATCAATGTGCAAAGCGGCCTCTTCTaGAATCTAGGTCACATGTGG +
Preference number: 4 (lower is better)
Translates to: LPLGHCSVVSGGVSGINVQSGLF*NLGHMW
Trigger: CCACATGTGACCTAGATTGCAGAAGAGGCCGCTTTG...CACATTGATGCCTGAGACACCTCCAGAGACTACAGAACAATGTCCCAGAGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp GGTGCTTTAGAATTCCTCCTTCGTCCCCATACTGCCTGCTTCACATTCACACAAACCAAATGTCCCCACTaGGCACTCTTGGCCACAGTC +
Preference number: 4 (lower is better)
Translates to: GALEFLLRPHTACFTFTQTKCPH*ALLATV
Trigger: GACTGTGGCCAAGAGTGCCCAGTGGGGACATTTGGT...TTGTGTGAATGTGAAGCAGGCAGTATGGGGACGAAGGAGGAATTCTAAAGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR TCA 90 bp ACACAACGCTCCACCCCACTCTCTGCTCCATCCCTCTGCTTTAACCTAAGTCTCCGCAGGTCCCACCATTaGGACACTTACAAATTTGTT +
Preference number: 4 (lower is better)
Translates to: TQRSTPLSAPSLCFNLSLRRSHH*DTYKFV
Trigger: AACAAATTTGTAAGTGTCTCAATGGTGGGACCTGCG...GAGACTTAGGTTAAAGCAGAGGGATGGAGCAGAGAGTGGGGTGGAGCGTTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR GCA 90 bp ATCCATAGCTGTCCACAGCAATCCATGGCTTTCCAGAAGAGGTGTGGATCCAAACATCTTCACAGGCTTTaGGGTCTGCAGCAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: IHSCPQQSMAFQKRCGSKHLHRL*GLQQAG
Trigger: ACCAGCTTGCTGCAGACCGCAAAGCCTGTGAAGATG...TTTGGATCCACACCTCTTCTGGAAAGCCATGGATTGCTGTGGACAGCTATGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR GCA 90 bp GGTGCTTTAGAATTCCTCCTTCGTCCCCATACTGCCTGCTTCACATTCACACAATCTTACGACAGTGTTTaGCGTAGAAGCCCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: GALEFLLRPHTACFTFTQSYDSV*RRSPWG
Trigger: GCCCCAAGGGCTTCTACGGCAAACACTGTCGTAAGA...TTGTGTGAATGTGAAGCAGGCAGTATGGGGACGAAGGAGGAATTCTAAAGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CCA 90 bp CTGGAGGTGTCTCAGGCATCAATGTGTTCTCTGGAACAATTCACCTTGACAGGCATCTTGGAAGAGTTGTaGAAGCTCATCCCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: LEVSQASMCSLEQFTLTGILEEL*KLIPQH
Trigger: GTGCTGGGGGATGAGCTTCCACAACTCTTCCAAGAT...GCCTGTCAAGGTGAATTGTTCCAGAGAACACATTGATGCCTGAGACACCTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR GCA 90 bp ATCCATAGCTGTCCACAGCAATCCATGGCTTTCCAGAAGAGGTGTGGATCCAAATATAGTACACAGTCCTaGGCTCTTGGCCAACACACC +
Preference number: 4 (lower is better)
Translates to: IHSCPQQSMAFQKRCGSKYSTQS*ALGQHT
Trigger: GGTGTGTTGGCCAAGAGCGCAGGACTGTGTACTATA...TTTGGATCCACACCTCTTCTGGAAAGCCATGGATTGCTGTGGACAGCTATGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
3UTR CAA 72 bp ATAAATATGGTCTGGACTACATTTCCAGGTAAACAGTaGGCTGGCTGCAGCAGTCCATGGCCTAGCACCAGA +
Preference number: 4 (lower is better)
Translates to: INMVWTTFPGKQ*AGCSSPWPSTR
Trigger: TCTGGTGCTAGGCCATGGACTGCTGCAGCCAGCCAACTGTTTACCTGGAAATGTAGTCCAGACCATATTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR GCA 90 bp CTGAAGCATTACATTACATGCATGTCATTACAGAGGGGTACAGGAGGTTCCCATAGCAGTTGCAGGCACTaGCACAGTCTAACCCAAAGA +
Preference number: 4 (lower is better)
Translates to: LKHYITCMSLQRGTGGSHSSCRH*HSLTQR
Trigger: TCTTTGGGTTAGACTGTGGCAGTGCCTGCAACTGCT...ATGGGAACCTCCTGTACCCCTCTGTAATGACATGCATGTAATGTAATGCTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS CCA 90 bp GGCTGGCGGTGGCCCACCAGGGTCAGCTTCTGTTCTGCACACACGTaGGGCATGCTCGGCTGCAGCGGGCGCGGGGGTAGCGGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: GWRWPTRVSFCSAHT*GMLGCSGRGGSGWE
Trigger: CTCCCAGCCGCTACCCCCGCGCCCGCTGCAGCCGAGCATGCCCCACGTGTGTGCAGAACAGAAGCTGACCCTGGTGGGCCACCGCCAGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS GCA 90 bp ACCAGGGTCAGCTTCTGTTCTGCACACACGTGGGGCATGCTCGGCTaGAGCGGGCGCGGGGGTAGCGGCTGGGAGGCTGCAGGCACGGCG +
Preference number: 5 (lower is better)
Translates to: TRVSFCSAHTWGMLG*SGRGGSGWEAAGTA
Trigger: CGCCGTGCCTGCAGCCTCCCAGCCGCTACCCCCGCGCCCGCTGCAGCCGAGCATGCCCCACGTGTGTGCAGAACAGAAGCTGACCCTGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS GCA 90 bp GGTGGCCCACCAGGGTCAGCTTCTGTTCTGCACACACGTGGGGCATaGTCGGCTGCAGCGGGCGCGGGGGTAGCGGCTGGGAGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: GGPPGSASVLHTRGA*SAAAGAGVAAGRLQ
Trigger: CTGCAGCCTCCCAGCCGCTACCCCCGCGCCCGCTGCAGCCGAGCATGCCCCACGTGTGTGCAGAACAGAAGCTGACCCTGGTGGGCCACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS CCA 90 bp TGGCCGGCAGGTGCAACGGTTTCTGCAGCCTGGCCCAAAGGAGCCTaGCTCGCACTCCGCCTCGCAGCGCTCGCCCTGGAAGCCGGCCTT +
Preference number: 5 (lower is better)
Translates to: WPAGATVSAAWPKGA*LALRLAALALEAGL
Trigger: AAGGCCGGCTTCCAGGGCGAGCGCTGCGAGGCGGAGTGCGAGCCAGGCTCCTTTGGGCCAGGCTGCAGAAACCGTTGCACCTGCCGGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CCA 90 bp GTCACAGGCCACACCTGGCCGGCAGGTGCAACGGTTTCTGCAGCCTaGCCCAAAGGAGCCTGGCTCGCACTCCGCCTCGCAGCGCTCGCC +
Preference number: 5 (lower is better)
Translates to: VTGHTWPAGATVSAA*PKGAWLALRLAALA
Trigger: GGCGAGCGCTGCGAGGCGGAGTGCGAGCCAGGCTCCTTTGGGCCAGGCTGCAGAAACCGTTGCACCTGCCGGCCAGGTGTGGCCTGTGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS GCA 90 bp CCGTCTGCACAGGGGCTTCTCCGGACACAGCGCCTGCCATCCTCCTaGAGCTGGTACTGGGGCCGGCACTGGCAGCGGTGCTGTGTCACG +
Preference number: 5 (lower is better)
Translates to: PSAQGLLRTQRLPSS*SWYWGRHWQRCCVT
Trigger: CGTGACACAGCACCGCTGCCAGTGCCGGCCCCAGTACCAGCTGCAGGAGGATGGCAGGCGCTGTGTCCGGAGAAGCCCCTGTGCAGACGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CCA 90 bp GCACAGGGGCTTCTCCGGACACAGCGCCTGCCATCCTCCTGCAGCTaGTACTGGGGCCGGCACTGGCAGCGGTGCTGTGTCACGGTGAGC +
Preference number: 5 (lower is better)
Translates to: AQGLLRTQRLPSSCS*YWGRHWQRCCVTVS
Trigger: GCTCACCGTGACACAGCACCGCTGCCAGTGCCGGCCCCAGTACCAGCTGCAGGAGGATGGCAGGCGCTGTGTCCGGAGAAGCCCCTGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CCA 90 bp GGCCCAGGGAGGGCAAGCAAGGTGACAGAAACGGCCATAGAGGCCTaGGTCACAGAGGCAGGCCCCATAGAGGCGGTGGCACCGGCCCCG +
Preference number: 5 (lower is better)
Translates to: GPGRASKVTETAIEA*VTEAGPIEAVAPAP
Trigger: CGGGGCCGGTGCCACCGCCTCTATGGGGCCTGCCTCTGTGACCCAGGCCTCTATGGCCGTTTCTGTCACCTTGCTTGCCCTCCCTGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS TCA 90 bp ATGCCTGCTGCCCGCAGCCCGACCTCCACACAGGCACTACGCGGCTaGAGGCTTGCACACAAGGCTGGCGGTGGCCCACCAGGGTCAGCT +
Preference number: 5 (lower is better)
Translates to: MPAARSPTSTQALRG*RLAHKAGGGPPGSA
Trigger: AGCTGACCCTGGTGGGCCACCGCCAGCCTTGTGTGCAAGCCTTCAGCCGCGTAGTGCCTGTGTGGAGGTCGGGCTGCGGGCAGCAGGCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS GCA 90 bp AGCCACCATTGCCGTCTGCACAGGGGCTTCTCCGGACACAGCGCCTaGCATCCTCCTGCAGCTGGTACTGGGGCCGGCACTGGCAGCGGT +
Preference number: 5 (lower is better)
Translates to: SHHCRLHRGFSGHSA*HPPAAGTGAGTGSG
Trigger: ACCGCTGCCAGTGCCGGCCCCAGTACCAGCTGCAGGAGGATGGCAGGCGCTGTGTCCGGAGAAGCCCCTGTGCAGACGGCAATGGTGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS GCA 90 bp TCACAGGGTCACAGGCCACACCTGGCCGGCAGGTGCAACGGTTTCTaGAGCCTGGCCCAAAGGAGCCTGGCTCGCACTCCGCCTCGCAGC +
Preference number: 5 (lower is better)
Translates to: SQGHRPHLAGRCNGF*SLAQRSLARTPPRS
Trigger: GCTGCGAGGCGGAGTGCGAGCCAGGCTCCTTTGGGCCAGGCTGCAGAAACCGTTGCACCTGCCGGCCAGGTGTGGCCTGTGACCCTGTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CCA 90 bp TGGCAGGCCTGCTCACAGCCAGGCCCAGTGAAGCCGGGTGGACAGTaGCACTCTCCAGAGACATGGTGGCAGGAGGCACCAGGCGGGCAG +
Preference number: 5 (lower is better)
Translates to: WQACSQPGPVKPGGQ*HSPETWWQEAPGGQ
Trigger: CTGCCCGCCTGGTGCCTCCTGCCACCATGTCTCTGGAGAGTGCCACTGTCCACCCGGCTTCACTGGGCCTGGCTGTGAGCAGGCCTGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS CCA 90 bp GCCAGGCTGGCAGGCCTGCTCACAGCCAGGCCCAGTGAAGCCGGGTaGACAGTGGCACTCTCCAGAGACATGGTGGCAGGAGGCACCAGG +
Preference number: 5 (lower is better)
Translates to: ARLAGLLTARPSEAG*TVALSRDMVAGGTR
Trigger: CCTGGTGCCTCCTGCCACCATGTCTCTGGAGAGTGCCACTGTCCACCCGGCTTCACTGGGCCTGGCTGTGAGCAGGCCTGCCAGCCTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS CCA 90 bp GGTCACATGCCGCCCCTTGCCCGCATGTACACACGTGGGCACAGCTaGGGCCGAAGCGACCCTGTGGACAGGCAAGGCTACAGTCGGCCC +
Preference number: 5 (lower is better)
Translates to: GHMPPLARMYTRGHS*GRSDPVDRQGYSRP
Trigger: GGGCCGACTGTAGCCTTGCCTGTCCACAGGGTCGCTTCGGCCCCAGCTGTGCCCACGTGTGTACATGCGGGCAAGGGGCGGCATGTGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030897.15
ENSMUST00000128700.3
ENSMUST00000152159.8
CDS CCA 90 bp GGGCTTCTCCGGACACAGCGCCTGCCATCCTCCTGCAGCTGGTACTaGGGCCGGCACTGGCAGCGGTGCTGTGTCACGGTGAGCTGTACA +
Preference number: 5 (lower is better)
Translates to: GLLRTQRLPSSCSWY*GRHWQRCCVTVSCT
Trigger: TGTACAGCTCACCGTGACACAGCACCGCTGCCAGTGCCGGCCCCAGTACCAGCTGCAGGAGGATGGCAGGCGCTGTGTCCGGAGAAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CCA 90 bp GGCCCAAAGGAGCCTGGCTCGCACTCCGCCTCGCAGCGCTCGCCCTaGAAGCCGGCCTTGCAGGAGCAGCTGCCATCCTTCGAGTTACAA +
Preference number: 5 (lower is better)
Translates to: GPKEPGSHSASQRSP*KPALQEQLPSFELQ
Trigger: TTGTAACTCGAAGGATGGCAGCTGCTCCTGCAAGGCCGGCTTCCAGGGCGAGCGCTGCGAGGCGGAGTGCGAGCCAGGCTCCTTTGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CCA 90 bp CCCGCATGTACACACGTGGGCACAGCTGGGGCCGAAGCGACCCTGTaGACAGGCAAGGCTACAGTCGGCCCCAAGGAACCCAGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: PACTHVGTAGAEATL*TGKATVGPKEPSRA
Trigger: TGCCCTGCTGGGTTCCTTGGGGCCGACTGTAGCCTTGCCTGTCCACAGGGTCGCTTCGGCCCCAGCTGTGCCCACGTGTGTACATGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030897.15
ENSMUST00000128700.3
ENSMUST00000152159.8
CDS CCA 90 bp CCCGACACTGGGTCACATGCCGCCCCTTGCCCGCATGTACACACGTaGGCACAGCTGGGGCCGAAGCGACCCTGTGGACAGGCAAGGCTA +
Preference number: 5 (lower is better)
Translates to: PDTGSHAAPCPHVHT*AQLGPKRPCGQARL
Trigger: TAGCCTTGCCTGTCCACAGGGTCGCTTCGGCCCCAGCTGTGCCCACGTGTGTACATGCGGGCAAGGGGCGGCATGTGACCCAGTGTCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030897.15
ENSMUST00000128700.3
ENSMUST00000152159.8
CDS CCA 90 bp GCAACCAGCCCCATGGTGTCCAGGAAGGCACTTCTGGGCACAGTGTaGGCCCCAGCGGCCAGCTGGGCAGATGCACGAGCCAGTGACAGC +
Preference number: 5 (lower is better)
Translates to: ATSPMVSRKALLGTV*APAASWADARASDS
Trigger: GCTGTCACTGGCTCGTGCATCTGCCCAGCTGGCCGCTGGGGCCCACACTGTGCCCAGAAGTGCCTTCCTGGACACCATGGGGCTGGTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152159.8
CDS CCA 90 bp CAGTTGAGCCGGCAACCAGCCCCATGGTGTCCAGGAAGGCACTTCTaGGCACAGTGTGGGCCCCAGCGGCCAGCTGGGCAGATGCACGAG +
Preference number: 5 (lower is better)
Translates to: QLSRQPAPWCPGRHF*AQCGPQRPAGQMHE
Trigger: CTCGTGCATCTGCCCAGCTGGCCGCTGGGGCCCACACTGTGCCCAGAAGTGCCTTCCTGGACACCATGGGGCTGGTTGCCGGCTCAACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152159.8
CDS-3UTR CAA 90 bp CACCAGCAGAGGCCTGGGTCCCTTGGGCTGGAACACAGTAGTGGGCCTCTGTGGCCCCACTGGGCACTCTaGGCCACAGTCCTCCCCCTG +
Preference number: 5 (lower is better)
Translates to: HQQRPGSLGLEHSSGPLWPHWAL*ATVLPL
Trigger: CAGGGGGAGGACTGTGGCCAAGAGTGCCCAGTGGGG...CCACAGAGGCCCACTACTGTGTTCCAGCCCAAGGGACCCAGGCCTCTGCTGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS TCA 90 bp TCAGGGTCGCAGCTGGCACCATGCTCACATGCAGGGCAGATCTCTTaGCAGCCGAGCCCCCAACGGCCCTCGGGACAGTCGGCTCCACAG +
Preference number: 5 (lower is better)
Translates to: SGSQLAPCSHAGQIS*QPSPQRPSGQSAPQ
Trigger: CTGTGGAGCCGACTGTCCCGAGGGCCGTTGGGGGCTCGGCTGTCAAGAGATCTGCCCTGCATGTGAGCATGGTGCCAGCTGCGACCCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS TCA 90 bp GCCCATAGCGCCCAGATGGGCATCCCTGCTCACAGCCAGGCCCAGTaGAGCCGGGTGGACAGTGGCACTCTCCAGAGACATGGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: AHSAQMGIPAHSQAQ*SRVDSGTLQRHGGR
Trigger: CCTGCCACCATGTCTCTGGAGAGTGCCACTGTCCACCCGGCTTCACTGGGCCTGGCTGTGAGCAGGGATGCCCATCTGGGCGCTATGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128700.3
ENSMUST00000152159.8
CDS GCA 90 bp TGCCCGCAGCCCGACCTCCACACAGGCACTACGCGGCTGAAGGCTTaGACACAAGGCTGGCGGTGGCCCACCAGGGTCAGCTTCTGTTCT +
Preference number: 5 (lower is better)
Translates to: CPQPDLHTGTTRLKA*TQGWRWPTRVSFCS
Trigger: AGAACAGAAGCTGACCCTGGTGGGCCACCGCCAGCCTTGTGTGCAAGCCTTCAGCCGCGTAGTGCCTGTGTGGAGGTCGGGCTGCGGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS GCA 90 bp AGGGCAGCTGGCCATCCAGGTCCACCACGGATTCTTCTAGGGGCGTaGAGCCCCTGCGGTCCTCATCCAGCCGGTAGCCAGCCTCACAGA +
Preference number: 5 (lower is better)
Translates to: RAAGHPGPPRILLGA*SPCGPHPAGSQPHR
Trigger: TCTGTGAGGCTGGCTACCGGCTGGATGAGGACCGCAGGGGCTGCACGCCCCTAGAAGAATCCGTGGTGGACCTGGATGGCCAGCTGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CCA 90 bp GGGTGGATGCAGTCAGGCCCCCAGTGTCCACTGTCACAGGCTCTCTaGCAGCTGAGGCCAGTCCACCCAGGGGCACAGCTACAGCGTCCA +
Preference number: 5 (lower is better)
Translates to: GWMQSGPQCPLSQAL*QLRPVHPGAQLQRP
Trigger: TGGACGCTGTAGCTGTGCCCCTGGGTGGACTGGCCTCAGCTGCCAGAGAGCCTGTGACAGTGGACACTGGGGGCCTGACTGCATCCACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS TCA 90 bp CCAGAGACATGGTGGCAGGAGGCACCAGGCGGGCAGTGGCAACGCTaGGCACAGGCCTCTCCAAACCAGCCACGTGGACAGGCCTGTTCA +
Preference number: 5 (lower is better)
Translates to: PETWWQEAPGGQWQR*AQASPNQPRGQACS
Trigger: TGAACAGGCCTGTCCACGTGGCTGGTTTGGAGAGGCCTGTGCTCAGCGTTGCCACTGCCCGCCTGGTGCCTCCTGCCACCATGTCTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS GCA 90 bp GGCCATCCAGGTCCACCACGGATTCTTCTAGGGGCGTGCAGCCCCTaGGGTCCTCATCCAGCCGGTAGCCAGCCTCACAGAAGCACTGGA +
Preference number: 5 (lower is better)
Translates to: GHPGPPRILLGACSP*GPHPAGSQPHRSTG
Trigger: TCCAGTGCTTCTGTGAGGCTGGCTACCGGCTGGATGAGGACCGCAGGGGCTGCACGCCCCTAGAAGAATCCGTGGTGGACCTGGATGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS GCA 90 bp CGGCGTCACAGTTCCCATGGCCTGCACTGCAGTTGCAGGGGTGGATaGAGTCAGGCCCCCAGTGTCCACTGTCACAGGCTCTCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: RRHSSHGLHCSCRGG*SQAPSVHCHRLSGS
Trigger: GCTGCCAGAGAGCCTGTGACAGTGGACACTGGGGGCCTGACTGCATCCACCCCTGCAACTGCAGTGCAGGCCATGGGAACTGTGACGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS GCA 90 bp GACACAGGCCCCCATTCCTGCAGGCACACTTGTGTTCACAGCCCTTaGCAAACCGGTCCTGGGGACAGCCGCGCTCACAATGGCCTCCCG +
Preference number: 5 (lower is better)
Translates to: DTGPHSCRHTCVHSP*QTGPGDSRAHNGLP
Trigger: CGGGAGGCCATTGTGAGCGCGGCTGTCCCCAGGACCGGTTTGGCAAGGGCTGTGAACACAAGTGTGCCTGCAGGAATGGGGGCCTGTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000030897.15
ENSMUST00000128700.3
ENSMUST00000152159.8
CDS CCA 90 bp ATGGCCTCCCGTCTTCCCGGGAGGACAGATGCAAGTCCCCGACACTaGGTCACATGCCGCCCCTTGCCCGCATGTACACACGTGGGCACA +
Preference number: 5 (lower is better)
Translates to: MASRLPGRTDASPRH*VTCRPLPACTHVGT
Trigger: TGTGCCCACGTGTGTACATGCGGGCAAGGGGCGGCATGTGACCCAGTGTCGGGGACTTGCATCTGTCCTCCCGGGAAGACGGGAGGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030897.15
ENSMUST00000128700.3
ENSMUST00000152159.8
CDS CCA 90 bp TCACAGCCCTTGCCAAACCGGTCCTGGGGACAGCCGCGCTCACAATaGCCTCCCGTCTTCCCGGGAGGACAGATGCAAGTCCCCGACACT +
Preference number: 5 (lower is better)
Translates to: SQPLPNRSWGQPRSQ*PPVFPGGQMQVPDT
Trigger: AGTGTCGGGGACTTGCATCTGTCCTCCCGGGAAGACGGGAGGCCATTGTGAGCGCGGCTGTCCCCAGGACCGGTTTGGCAAGGGCTGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030897.15
ENSMUST00000128700.3
ENSMUST00000152159.8
CDS TCA 90 bp GGCCGGCACTGGCAGCGGTGCTGTGTCACGGTGAGCTGTACACACTaGTGCTGGCAGCCACCATTTCCCAGAGTGCAGGAGCTGATGGCC +
Preference number: 5 (lower is better)
Translates to: GRHWQRCCVTVSCTH*CWQPPFPRVQELMA
Trigger: GGCCATCAGCTCCTGCACTCTGGGAAATGGTGGCTGCCAGCATCAGTGTGTACAGCTCACCGTGACACAGCACCGCTGCCAGTGCCGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS TCA 90 bp GCAGCTGGTACTGGGGCCGGCACTGGCAGCGGTGCTGTGTCACGGTaGGCTGTACACACTGATGCTGGCAGCCACCATTTCCCAGAGTGC +
Preference number: 5 (lower is better)
Translates to: AAGTGAGTGSGAVSR*AVHTDAGSHHFPEC
Trigger: GCACTCTGGGAAATGGTGGCTGCCAGCATCAGTGTGTACAGCTCACCGTGACACAGCACCGCTGCCAGTGCCGGCCCCAGTACCAGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS TCA 90 bp CTGACAGTCGGTGCCATGGTAACCAGCAGCACATACGCAGGCCCCTaGAGCAGGGTGGCAGGCCCAGGTCTCACCAGGACATTGGCACGG +
Preference number: 5 (lower is better)
Translates to: LTVGAMVTSSTYAGP*SRVAGPGLTRTLAR
Trigger: CCGTGCCAATGTCCTGGTGAGACCTGGGCCTGCCACCCTGCTTCAGGGGCCTGCGTATGTGCTGCTGGTTACCATGGCACCGACTGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS TCA 90 bp CGCAGAACTGGCCATGGAAGCCAGCAGGGCAGAGGCACCGGCCACTaGCAGGGTCACAGGGAGCGCCCTGTTGACACTCGCAAACTCTCT +
Preference number: 5 (lower is better)
Translates to: RRTGHGSQQGRGTGH*QGHRERPVDTRKLS
Trigger: AGAGAGTTTGCGAGTGTCAACAGGGCGCTCCCTGTGACCCTGTCAGTGGCCGGTGCCTCTGCCCTGCTGGCTTCCATGGCCAGTTCTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000128700.3
CDS TCA 90 bp CACATGTGGTTCCTGCACGCCCTGGTGGGCAAAGGCAGAGGCCGCTaGTGGGATCACAGGGCACACCCGTGGGGCAGTTACACTGCTGCA +
Preference number: 5 (lower is better)
Translates to: HMWFLHALVGKGRGR*WDHRAHPWGSYTAA
Trigger: TGCAGCAGTGTAACTGCCCCACGGGTGTGCCCTGTGATCCCATCAGCGGCCTCTGCCTTTGCCCACCAGGGCGTGCAGGAACCACATGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS GCA 90 bp GCCCCGGAGTTCCTGGCATGTATGCATACAGCCACCATTGCCGTCTaGACAGGGGCTTCTCCGGACACAGCGCCTGCCATCCTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: APEFLACMHTATIAV*TGASPDTAPAILLQ
Trigger: CTGCAGGAGGATGGCAGGCGCTGTGTCCGGAGAAGCCCCTGTGCAGACGGCAATGGTGGCTGTATGCATACATGCCAGGAACTCCGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS GCA 90 bp GGGCAAGGCCCCGGAGTTCCTGGCATGTATGCATACAGCCACCATTaGCGTCTGCACAGGGGCTTCTCCGGACACAGCGCCTGCCATCCT +
Preference number: 5 (lower is better)
Translates to: GQGPGVPGMYAYSHH*RLHRGFSGHSACHP
Trigger: AGGATGGCAGGCGCTGTGTCCGGAGAAGCCCCTGTGCAGACGGCAATGGTGGCTGTATGCATACATGCCAGGAACTCCGGGGCCTTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS GCA 90 bp GGGTGGCAGCCACAGTGGGCAAGGCCCCGGAGTTCCTGGCATGTATaGATACAGCCACCATTGCCGTCTGCACAGGGGCTTCTCCGGACA +
Preference number: 5 (lower is better)
Translates to: GWQPQWARPRSSWHV*IQPPLPSAQGLLRT
Trigger: TGTCCGGAGAAGCCCCTGTGCAGACGGCAATGGTGGCTGTATGCATACATGCCAGGAACTCCGGGGCCTTGCCCACTGTGGCTGCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS GCA 90 bp CTGGCTCGCACTCCGCCTCGCAGCGCTCGCCCTGGAAGCCGGCCTTaGAGGAGCAGCTGCCATCCTTCGAGTTACAAGATCTTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: LARTPPRSARPGSRP*RSSCHPSSYKILCV
Trigger: CACACACAAGATCTTGTAACTCGAAGGATGGCAGCTGCTCCTGCAAGGCCGGCTTCCAGGGCGAGCGCTGCGAGGCGGAGTGCGAGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CCA 90 bp GACCTCCACACAGGCACTACGCGGCTGAAGGCTTGCACACAAGGCTaGCGGTGGCCCACCAGGGTCAGCTTCTGTTCTGCACACACGTGG +
Preference number: 5 (lower is better)
Translates to: DLHTGTTRLKACTQG*RWPTRVSFCSAHTW
Trigger: CCACGTGTGTGCAGAACAGAAGCTGACCCTGGTGGGCCACCGCCAGCCTTGTGTGCAAGCCTTCAGCCGCGTAGTGCCTGTGTGGAGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS CCA 90 bp CACCCACGGTGTTGCAGCACGGGCCCTCACAGCCCCCGTTGGCATTaGCACATTCATCCACATCTGAGAGGCAGCCTTCCTGGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: HPRCCSTGPHSPRWH*HIHPHLRGSLPGQA
Trigger: AGCCTGGCCAGGAAGGCTGCCTCTCAGATGTGGATGAATGTGCCAATGCCAACGGGGGCTGTGAGGGCCCGTGCTGCAACACCGTGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS CCA 90 bp GTCTGTAGCCGGCGAAGCAGCTACACTCATACCCACCGGGGGTGTTaGCACACACCTGCTGGCAGCACGGAGAGTTGGCGCAGTCGTCGA +
Preference number: 5 (lower is better)
Translates to: VCSRRSSYTHTHRGC*HTPAGSTESWRSRR
Trigger: TCGACGACTGCGCCAACTCTCCGTGCTGCCAGCAGGTGTGTGCCAACACCCCCGGTGGGTATGAGTGTAGCTGCTTCGCCGGCTACAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CCA 90 bp CTGACGGCGTCACAGTTCCCATGGCCTGCACTGCAGTTGCAGGGGTaGATGCAGTCAGGCCCCCAGTGTCCACTGTCACAGGCTCTCTGG +
Preference number: 5 (lower is better)
Translates to: LTASQFPWPALQLQG*MQSGPQCPLSQALW
Trigger: CCAGAGAGCCTGTGACAGTGGACACTGGGGGCCTGACTGCATCCACCCCTGCAACTGCAGTGCAGGCCATGGGAACTGTGACGCCGTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CCA 90 bp TTCCTGCAGGCACACTTGTGTTCACAGCCCTTGCCAAACCGGTCCTaGGGACAGCCGCGCTCACAATGGCCTCCCGTCTTCCCGGGAGGA +
Preference number: 5 (lower is better)
Translates to: FLQAHLCSQPLPNRS*GQPRSQWPPVFPGG
Trigger: TCCTCCCGGGAAGACGGGAGGCCATTGTGAGCGCGGCTGTCCCCAGGACCGGTTTGGCAAGGGCTGTGAACACAAGTGTGCCTGCAGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030897.15
ENSMUST00000128700.3
ENSMUST00000152159.8
CDS-3UTR CAA 90 bp CACCAGCAGAGGCCTGGGTCCCTTGGGCTGGAACACAGTAGTGGGCCTCTGTGGTGGCAGCACGGAGAGTaGGCGCAGTCGTCGATGTCA +
Preference number: 5 (lower is better)
Translates to: HQQRPGSLGLEHSSGPLWWQHGE*AQSSMS
Trigger: TGACATCGACGACTGCGCCAACTCTCCGTGCTGCCA...CCACAGAGGCCCACTACTGTGTTCCAGCCCAAGGGACCCAGGCCTCTGCTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS GCA 90 bp GGCACTCGTTCTCACAGGCCAAGCCGGTCCAACCCTCTGGGCACGTaGACTGGCCCAAGATGGGGTCACAGTTCCCTCCATTTCGGCAGA +
Preference number: 5 (lower is better)
Translates to: GTRSHRPSRSNPLGT*TGPRWGHSSLHFGR
Trigger: TCTGCCGAAATGGAGGGAACTGTGACCCCATCTTGGGCCAGTGCACGTGCCCAGAGGGTTGGACCGGCTTGGCCTGTGAGAACGAGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000128700.3
CDS GCA 90 bp AGCCTGGCCCATAGCGCCCAGATGGGCATCGTTGCTGACAGTCGGTaGCATGGTAACCAGCAGCACATACGCAGGCCCCTGAAGCAGGGT +
Preference number: 5 (lower is better)
Translates to: SLAHSAQMGIVADSR*HGNQQHIRRPLKQG
Trigger: ACCCTGCTTCAGGGGCCTGCGTATGTGCTGCTGGTTACCATGGCACCGACTGTCAGCAACGATGCCCATCTGGGCGCTATGGGCCAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS GCA 90 bp AGAAGCCAGGGCCACAGAGGCAAGCGCCGGAGGTGGGCTCACAGCTaGCATTGTTCTGACAGGAACACTCCAGGAGGCAGGCAGCACCAT +
Preference number: 5 (lower is better)
Translates to: RSQGHRGKRRRWAHS*HCSDRNTPGGRQHH
Trigger: ATGGTGCTGCCTGCCTCCTGGAGTGTTCCTGTCAGAACAATGGCAGCTGTGAGCCCACCTCCGGCGCTTGCCTCTGTGGCCCTGGCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030897.15
ENSMUST00000128700.3
ENSMUST00000152159.8
CDS CCA 90 bp CACATCTTGGCACGTTTTGCCATCACCCTGCAGCTGGTAGCCGGGTaGGCAGCGACAGTAAAAGCCACCCACGGTGTTGCAGCACGGGCC +
Preference number: 5 (lower is better)
Translates to: HILARFAITLQLVAG*AATVKATHGVAARA
Trigger: GGCCCGTGCTGCAACACCGTGGGTGGCTTTTACTGTCGCTGCCCACCCGGCTACCAGCTGCAGGGTGATGGCAAAACGTGCCAAGATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS CCA 90 bp TCATCTTGGAAGAGTTGTGGAAGCTCATCCCCCAGCACCGCAATGTaGGGCAGGGGCCGGACAAAGGGCAGCTGGCCATCCAGGTCCACC +
Preference number: 5 (lower is better)
Translates to: SSWKSCGSSSPSTAM*GRGRTKGSWPSRST
Trigger: GGTGGACCTGGATGGCCAGCTGCCCTTTGTCCGGCCCCTGCCCCACATTGCGGTGCTGGGGGATGAGCTTCCACAACTCTTCCAAGATGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CCA 90 bp GTGGCCGGATGGCAATGCCCATCATTGGCACAAGCACACCTCATCTaGCAGCCGGTCCCAAACCAGCCTGCTGGGCAAGCATCCTGGCAG +
Preference number: 5 (lower is better)
Translates to: VAGWQCPSLAQAHLI*QPVPNQPAGQASWQ
Trigger: CTGCCAGGATGCTTGCCCAGCAGGCTGGTTTGGGACCGGCTGCCAGATGAGGTGTGCTTGTGCCAATGATGGGCATTGCCATCCGGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CCA 90 bp GGGCACAGCTACAGCGTCCAGTGGCCGGATGGCAATGCCCATCATTaGCACAAGCACACCTCATCTGGCAGCCGGTCCCAAACCAGCCTG +
Preference number: 5 (lower is better)
Translates to: GHSYSVQWPDGNAHH*HKHTSSGSRSQTSL
Trigger: CAGGCTGGTTTGGGACCGGCTGCCAGATGAGGTGTGCTTGTGCCAATGATGGGCATTGCCATCCGGCCACTGGACGCTGTAGCTGTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS TCA 90 bp AGGGCAGGTGCACAGGGGCCCTGTGCTAGTGTGACTACAGCCGTGTaGGCAGCCTCCGTTGCCAGCCTCGCAGCTGTTCACAATCTCCAT +
Preference number: 5 (lower is better)
Translates to: RAGAQGPCASVTTAV*AASVASLAAVHNLH
Trigger: ATGGAGATTGTGAACAGCTGCGAGGCTGGCAACGGAGGCTGCTCACACGGCTGTAGTCACACTAGCACAGGGCCCCTGTGCACCTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS GCA 90 bp GCGAAGCAGCTACACTCATACCCACCGGGGGTGTTGGCACACACCTaGTGGCAGCACGGAGAGTTGGCGCAGTCGTCGATGTCAATGCAG +
Preference number: 5 (lower is better)
Translates to: AKQLHSYPPGVLAHT*WQHGELAQSSMSMQ
Trigger: CTGCATTGACATCGACGACTGCGCCAACTCTCCGTGCTGCCAGCAGGTGTGTGCCAACACCCCCGGTGGGTATGAGTGTAGCTGCTTCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS GCA 90 bp CACAATCACAGCGCAGGGCACAGCCCGGCCCAAAGCGGCCTCTTCTaGAATCTAGGTCACATGTGGTTCCTGCACGCCCTGGTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: HNHSAGHSPAQSGLF*NLGHMWFLHALVGK
Trigger: TTTGCCCACCAGGGCGTGCAGGAACCACATGTGACCTAGATTGCAGAAGAGGCCGCTTTGGGCCGGGCTGTGCCCTGCGCTGTGATTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS CCA 90 bp AAAAGCCACCCACGGTGTTGCAGCACGGGCCCTCACAGCCCCCGTTaGCATTGGCACATTCATCCACATCTGAGAGGCAGCCTTCCTGGC +
Preference number: 5 (lower is better)
Translates to: KSHPRCCSTGPHSPR*HWHIHPHLRGSLPG
Trigger: GCCAGGAAGGCTGCCTCTCAGATGTGGATGAATGTGCCAATGCCAACGGGGGCTGTGAGGGCCCGTGCTGCAACACCGTGGGTGGCTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS CCA 90 bp ACCCACCGGGGGTGTTGGCACACACCTGCTGGCAGCACGGAGAGTTaGCGCAGTCGTCGATGTCAATGCAGGTCTTCTGGTCCTCATCCA +
Preference number: 5 (lower is better)
Translates to: THRGCWHTPAGSTES*RSRRCQCRSSGPHP
Trigger: TGGATGAGGACCAGAAGACCTGCATTGACATCGACGACTGCGCCAACTCTCCGTGCTGCCAGCAGGTGTGTGCCAACACCCCCGGTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CCA 90 bp AGGCCAAGCCGGTCCAACCCTCTGGGCACGTGCACTGGCCCAAGATaGGGTCACAGTTCCCTCCATTTCGGCAGAGACAGGAATGCTGAC +
Preference number: 5 (lower is better)
Translates to: RPSRSNPLGTCTGPR*GHSSLHFGRDRNAD
Trigger: GTCAGCATTCCTGTCTCTGCCGAAATGGAGGGAACTGTGACCCCATCTTGGGCCAGTGCACGTGCCCAGAGGGTTGGACCGGCTTGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS CCA 90 bp TCGTTCTCACAGGCCAAGCCGGTCCAACCCTCTGGGCACGTGCACTaGCCCAAGATGGGGTCACAGTTCCCTCCATTTCGGCAGAGACAG +
Preference number: 5 (lower is better)
Translates to: SFSQAKPVQPSGHVH*PKMGSQFPPFRQRQ
Trigger: CTGTCTCTGCCGAAATGGAGGGAACTGTGACCCCATCTTGGGCCAGTGCACGTGCCCAGAGGGTTGGACCGGCTTGGCCTGTGAGAACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000128700.3
CDS CCA 90 bp TCCAGGAAGGCACTCGTTCTCACAGGCCAAGCCGGTCCAACCCTCTaGGCACGTGCACTGGCCCAAGATGGGGTCACAGTTCCCTCCATT +
Preference number: 5 (lower is better)
Translates to: SRKALVLTGQAGPTL*ARALAQDGVTVPSI
Trigger: AATGGAGGGAACTGTGACCCCATCTTGGGCCAGTGCACGTGCCCAGAGGGTTGGACCGGCTTGGCCTGTGAGAACGAGTGCCTTCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000128700.3
CDS CCA 90 bp GTGCCCCCATTAAGGCAACTGCAGTTGAGCCGGCAACCAGCCCCATaGTGTCCAGGAAGGCACTCGTTCTCACAGGCCAAGCCGGTCCAA +
Preference number: 5 (lower is better)
Translates to: VPPLRQLQLSRQPAP*CPGRHSFSQAKPVQ
Trigger: TTGGACCGGCTTGGCCTGTGAGAACGAGTGCCTTCCTGGACACCATGGGGCTGGTTGCCGGCTCAACTGCAGTTGCCTTAATGGGGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000128700.3
CDS CCA 90 bp GGCATGGGTAGCAGTTCCTCCACAGATAGCGATAGTGAGTGCTGGTaGCACTCCCCAGGCTGCCCAGAAGCCACCAGAGCATTGCCAGCC +
Preference number: 5 (lower is better)
Translates to: GMGSSSSTDSDSECW*HSPGCPEATRALPA
Trigger: GGCTGGCAATGCTCTGGTGGCTTCTGGGCAGCCTGGGGAGTGCCACCAGCACTCACTATCGCTATCTGTGGAGGAACTGCTACCCATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152159.8
CDS GCA 90 bp TGGCCAGGCAGGTCCTGCCATCTGTGTGGAGCCGGAAGCCGGGTTTaGACTCACAGAGGTAAGAGCCGGGGGTATTCACACACCTGTGTT +
Preference number: 5 (lower is better)
Translates to: WPGRSCHLCGAGSRV*THRGKSRGYSHTCV
Trigger: AACACAGGTGTGTGAATACCCCCGGCTCTTACCTCTGTGAGTGCAAACCCGGCTTCCGGCTCCACACAGATGGCAGGACCTGCCTGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS GCA 90 bp CAGACCCAAGGCACATTCGTCCACATCTTCACAGGCTTTGCGGTCTaGAGCAAGCTGGTAACCTGGGTGGCAGCCACAGTGGGCAAGGCC +
Preference number: 5 (lower is better)
Translates to: QTQGTFVHIFTGFAV*SKLVTWVAATVGKA
Trigger: GGCCTTGCCCACTGTGGCTGCCACCCAGGTTACCAGCTTGCTGCAGACCGCAAAGCCTGTGAAGATGTGGACGAATGTGCCTTGGGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS GCA 90 bp CCGCCTCGCAGCGCTCGCCCTGGAAGCCGGCCTTGCAGGAGCAGCTaGCATCCTTCGAGTTACAAGATCTTGTGTGTGACTGCTCACAAA +
Preference number: 5 (lower is better)
Translates to: PPRSARPGSRPCRSS*HPSSYKILCVTAHK
Trigger: TTTGTGAGCAGTCACACACAAGATCTTGTAACTCGAAGGATGGCAGCTGCTCCTGCAAGGCCGGCTTCCAGGGCGAGCGCTGCGAGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CCA 90 bp GAAACAGGTACAAATCTGGCTGCAGTTAAGCCCAAAGGTGAGAGGTaGGCAAGTCTGGGCACAGTGTGGGCCCCAGCGGCCAGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: ETGTNLAAVKPKGER*ASLGTVWAPAASWA
Trigger: TGCCCAGCTGGCCGCTGGGGCCCACACTGTGCCCAGACTTGCCCACCTCTCACCTTTGGGCTTAACTGCAGCCAGATTTGTACCTGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS CCA 90 bp AAGCTTGACCATAGAAGCCAGGGCCACAGAGGCAAGCGCCGGAGGTaGGCTCACAGCTGCCATTGTTCTGACAGGAACACTCCAGGAGGC +
Preference number: 5 (lower is better)
Translates to: KLDHRSQGHRGKRRR*AHSCHCSDRNTPGG
Trigger: GCCTCCTGGAGTGTTCCTGTCAGAACAATGGCAGCTGTGAGCCCACCTCCGGCGCTTGCCTCTGTGGCCCTGGCTTCTATGGTCAAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030897.15
ENSMUST00000128700.3
ENSMUST00000152159.8
CDS CCA 90 bp CTGGTCATTGGTGCTCACGGGGTAGCCGGTCTGGCTCAGGTGGCATaGGTAGCAGTTCCTCCACAGATAGCGATAGTGAGTGCTGGTGGC +
Preference number: 5 (lower is better)
Translates to: LVIGAHGVAGLAQVA*VAVPPQIAIVSAGG
Trigger: GCCACCAGCACTCACTATCGCTATCTGTGGAGGAACTGCTACCCATGCCACCTGAGCCAGACCGGCTACCCCGTGAGCACCAATGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152159.8
CDS GCA 90 bp CTCGATCCGGTAACACTGCCGGCCATCAGCACCCAGCTCATAGCCTaGGTGACACACACACTTAAAGGACCCCTGAGTGTTGAGGCAGCC +
Preference number: 5 (lower is better)
Translates to: LDPVTLPAISTQLIA*VTHTLKGPLSVEAA
Trigger: GGCTGCCTCAACACTCAGGGGTCCTTTAAGTGTGTGTGTCACGCAGGCTATGAGCTGGGTGCTGATGGCCGGCAGTGTTACCGGATCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS GCA 90 bp ACACCTGCTGGCAGCACGGAGAGTTGGCGCAGTCGTCGATGTCAATaGAGGTCTTCTGGTCCTCATCCAGCTCATAACCACGAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: TPAGSTESWRSRRCQ*RSSGPHPAHNHEGR
Trigger: CCTGCCCTCGTGGTTATGAGCTGGATGAGGACCAGAAGACCTGCATTGACATCGACGACTGCGCCAACTCTCCGTGCTGCCAGCAGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS GCA 90 bp ATTGGCACAAGCACACCTCATCTGGCAGCCGGTCCCAAACCAGCCTaGTGGGCAAGCATCCTGGCAGCGGCTACCAACAAAACCAGGAAG +
Preference number: 5 (lower is better)
Translates to: IGTSTPHLAAGPKPA*WASILAAATNKTRK
Trigger: CTTCCTGGTTTTGTTGGTAGCCGCTGCCAGGATGCTTGCCCAGCAGGCTGGTTTGGGACCGGCTGCCAGATGAGGTGTGCTTGTGCCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS GCA 90 bp TCAGGTGGCATGGGTAGCAGTTCCTCCACAGATAGCGATAGTGAGTaGTGGTGGCACTCCCCAGGCTGCCCAGAAGCCACCAGAGCATTG +
Preference number: 5 (lower is better)
Translates to: SGGMGSSSSTDSDSE*WWHSPGCPEATRAL
Trigger: CAATGCTCTGGTGGCTTCTGGGCAGCCTGGGGAGTGCCACCAGCACTCACTATCGCTATCTGTGGAGGAACTGCTACCCATGCCACCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152159.8
CDS-3UTR CAA 90 bp GAAGGACCCACGGAGTCTACAGAAAGCACAGAAACCCAGGCAATGGGGACACCAGGGTGCTCACAGTCCTaGCCAAAGGTGCCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: EGPTESTESTETQAMGTPGCSQS*PKVPGW
Trigger: CCAGCCTGGCACCTTTGGCAAGGACTGTGAGCACCC...TGGTGTCCCCATTGCCTGGGTTTCTGTGCTTTCTGTAGACTCCGTGGGTCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CAA 90 bp TGGCCGACTGACTTGCTCCCCACTACTGGCCACACCACTGCGGCCTTTGAAGTGGGTGTCTTCACAAGCTaGACCATAGAAGCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: WPTDLLPTTGHTTAAFEVGVFTS*TIEARA
Trigger: GGCCCTGGCTTCTATGGTCAAGCTTGTGAAGACACC...CACTTCAAAGGCCGCAGTGGTGTGGCCAGTAGTGGGGAGCAAGTCAGTCGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS TCA 90 bp AAGATGGGGTCACAGTTCCCTCCATTTCGGCAGAGACAGGAATGCTaGCAGTTCTTGCCATACAGGCCAGCAGGGCAGGCCTGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: KMGSQFPPFRQRQEC*QFLPYRPAGQACRQ
Trigger: CTGCCTGCAGGCCTGCCCTGCTGGCCTGTATGGCAAGAACTGTCAGCATTCCTGTCTCTGCCGAAATGGAGGGAACTGTGACCCCATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS CCA 90 bp CACCATTGTGTGATCGACATTCATCCACATCTGGCCTCTGGTCATTaGTGCTCACGGGGTAGCCGGTCTGGCTCAGGTGGCATGGGTAGC +
Preference number: 5 (lower is better)
Translates to: HHCVIDIHPHLASGH*CSRGSRSGSGGMGS
Trigger: GCTACCCATGCCACCTGAGCCAGACCGGCTACCCCGTGAGCACCAATGACCAGAGGCCAGATGTGGATGAATGTCGATCACACAATGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152159.8
CDS-3UTR CAA 90 bp GAAGGACCCACGGAGTCTACAGAAAGCACAGAAACCCAGGCAATGGGGACACCATGGCCTGCACTGCAGTaGCAGGGGTGGATGCAGTCA +
Preference number: 5 (lower is better)
Translates to: EGPTESTESTETQAMGTPWPALQ*QGWMQS
Trigger: TGACTGCATCCACCCCTGCAACTGCAGTGCAGGCCA...TGGTGTCCCCATTGCCTGGGTTTCTGTGCTTTCTGTAGACTCCGTGGGTCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CAA 90 bp GGAAGGACCCACGGAGTCTACAGAAAGCACAGAAACCCAGGCAATGGGGACACCTTAAGGCAACTGCAGTaGAGCCGGCAACCAGCCCCA +
Preference number: 5 (lower is better)
Translates to: GRTHGVYRKHRNPGNGDTLRQLQ*SRQPAP
Trigger: TGGGGCTGGTTGCCGGCTCAACTGCAGTTGCCTTAA...GGTGTCCCCATTGCCTGGGTTTCTGTGCTTTCTGTAGACTCCGTGGGTCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS GCA 90 bp CATTGTGTGATCGACATTCATCCACATCTGGCCTCTGGTCATTGGTaGTCACGGGGTAGCCGGTCTGGCTCAGGTGGCATGGGTAGCAGT +
Preference number: 5 (lower is better)
Translates to: HCVIDIHPHLASGHW*SRGSRSGSGGMGSS
Trigger: ACTGCTACCCATGCCACCTGAGCCAGACCGGCTACCCCGTGAGCACCAATGACCAGAGGCCAGATGTGGATGAATGTCGATCACACAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152159.8
CDS CCA 90 bp CACAGCCCGGCCCAAAGCGGCCTCTTCTGCAATCTAGGTCACATGTaGTTCCTGCACGCCTGTCTTCACAAGCTTGACCATAGAAGCCAG +
Preference number: 5 (lower is better)
Translates to: HSPAQSGLFCNLGHM*FLHACLHKLDHRSQ
Trigger: CTGGCTTCTATGGTCAAGCTTGTGAAGACAGGCGTGCAGGAACCACATGTGACCTAGATTGCAGAAGAGGCCGCTTTGGGCCGGGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152159.8
CDS-3UTR CAA 90 bp GGAAGGACCCACGGAGTCTACAGAAAGCACAGAAACCCAGGCAATGGGGACACCACATCTTCACAGGCTTaGCGGTCTGCAGCAAGCTGG +
Preference number: 5 (lower is better)
Translates to: GRTHGVYRKHRNPGNGDTTSSQA*RSAASW
Trigger: CCAGCTTGCTGCAGACCGCAAAGCCTGTGAAGATGT...GGTGTCCCCATTGCCTGGGTTTCTGTGCTTTCTGTAGACTCCGTGGGTCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CAA 90 bp GGTGCTTTAGAATTCCTCCTTCGTCCCCATACTGCCTGCTTCACATTCACACAACCCTGGAAGCCGGCCTaGCAGGAGCAGCTGCCATCC +
Preference number: 5 (lower is better)
Translates to: GALEFLLRPHTACFTFTQPWKPA*QEQLPS
Trigger: GGATGGCAGCTGCTCCTGCAAGGCCGGCTTCCAGGG...TTGTGTGAATGTGAAGCAGGCAGTATGGGGACGAAGGAGGAATTCTAAAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CAA 90 bp ATCCATAGCTGTCCACAGCAATCCATGGCTTTCCAGAAGAGGTGTGGATCCAAAGCCCCGGCGGAGCAGTaGCAGGCACTGCCACAGTCT +
Preference number: 5 (lower is better)
Translates to: IHSCPQQSMAFQKRCGSKAPAEQ*QALPQS
Trigger: AGACTGTGGCAGTGCCTGCAACTGCTCCGCCGGGGC...TTTGGATCCACACCTCTTCTGGAAAGCCATGGATTGCTGTGGACAGCTATGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CAA 90 bp TTTCCAGGTAAACAGTTGGCTGGCTGCAGCAGTCCATGGCCTAGCACCAGAAGGTTGTGTTCACAGCCCTaGCCAAACCGGTCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: FPGKQLAGCSSPWPSTRRLCSQP*PNRSWG
Trigger: TCCCCAGGACCGGTTTGGCAAGGGCTGTGAACACAA...CCTTCTGGTGCTAGGCCATGGACTGCTGCAGCCAGCCAACTGTTTACCTGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS GCA 90 bp CAGGAGCAGCTGCCATCCTTCGAGTTACAAGATCTTGTGTGTGACTaGTCACAAAGGCAGTCCTCAGAACAGCCCGGTCCAAAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: QEQLPSFELQDLVCD*SQRQSSEQPGPKAQ
Trigger: CTGGGCCTTTGGACCGGGCTGTTCTGAGGACTGCCTTTGTGAGCAGTCACACACAAGATCTTGTAACTCGAAGGATGGCAGCTGCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CCA 90 bp ATCGCAGGTCCCACCATTGAGACACTTACAAATTTGTTCACAGCCTaGCCCATAGCGCCCAGATGGGCATCGTTGCTGACAGTCGGTGCC +
Preference number: 5 (lower is better)
Translates to: IAGPTIETLTNLFTA*PIAPRWASLLTVGA
Trigger: GGCACCGACTGTCAGCAACGATGCCCATCTGGGCGCTATGGGCCAGGCTGTGAACAAATTTGTAAGTGTCTCAATGGTGGGACCTGCGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CAA 90 bp GCTCCCTCTGGGACATTGTTCTGTAGTCTCTGGAGGTGTCTCAGGCATCAATGTCCCTCACAGCCCCCGTaGGCATTGGCACATTCATCC +
Preference number: 5 (lower is better)
Translates to: APSGTLFCSLWRCLRHQCPSQPP*ALAHSS
Trigger: GGATGAATGTGCCAATGCCAACGGGGGCTGTGAGGG...ACATTGATGCCTGAGACACCTCCAGAGACTACAGAACAATGTCCCAGAGGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CAA 90 bp GGTGCTTTAGAATTCCTCCTTCGTCCCCATACTGCCTGCTTCACATTCACACAATACCCACCGGGGGTGTaGGCACACACCTGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: GALEFLLRPHTACFTFTQYPPGV*AHTCWQ
Trigger: CTGCCAGCAGGTGTGTGCCAACACCCCCGGTGGGTA...TTGTGTGAATGTGAAGCAGGCAGTATGGGGACGAAGGAGGAATTCTAAAGCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CAA 90 bp GAAGGACCCACGGAGTCTACAGAAAGCACAGAAACCCAGGCAATGGGGACACCATTCCTGCAGGCACACTaGTGTTCACAGCCCTTGCCA +
Preference number: 5 (lower is better)
Translates to: EGPTESTESTETQAMGTPFLQAH*CSQPLP
Trigger: TGGCAAGGGCTGTGAACACAAGTGTGCCTGCAGGAA...TGGTGTCCCCATTGCCTGGGTTTCTGTGCTTTCTGTAGACTCCGTGGGTCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CAA 90 bp GAAGGACCCACGGAGTCTACAGAAAGCACAGAAACCCAGGCAATGGGGACACCATGGCAATGCCCATCATaGGCACAAGCACACCTCATC +
Preference number: 5 (lower is better)
Translates to: EGPTESTESTETQAMGTPWQCPS*AQAHLI
Trigger: GATGAGGTGTGCTTGTGCCAATGATGGGCATTGCCA...TGGTGTCCCCATTGCCTGGGTTTCTGTGCTTTCTGTAGACTCCGTGGGTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS GCA 90 bp AACCACCATTGTGTGATCGACATTCATCCACATCTTGGCACGTTTTaGCATCACCCTGCAGCTGGTAGCCGGGTGGGCAGCGACAGTAAA +
Preference number: 5 (lower is better)
Translates to: NHHCVIDIHPHLGTF*HHPAAGSRVGSDSK
Trigger: TTTACTGTCGCTGCCCACCCGGCTACCAGCTGCAGGGTGATGGCAAAACGTGCCAAGATGTGGATGAATGTCGATCACACAATGGTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CAA 90 bp CTCCCTCTGGGACATTGTTCTGTAGTCTCTGGAGGTGTCTCAGGCATCAATGTGCAGCCCCCGTTGGCATaGGCACATTCATCCACATCT +
Preference number: 5 (lower is better)
Translates to: LPLGHCSVVSGGVSGINVQPPLA*AHSSTS
Trigger: AGATGTGGATGAATGTGCCAATGCCAACGGGGGCTG...CACATTGATGCCTGAGACACCTCCAGAGACTACAGAACAATGTCCCAGAGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CAA 90 bp CCATACTGCCTGCTTCACATTCACACAACGCTCCACCCCACTCTCTGCTCCATCAGCCCCATAGTCATCTaGGAAGAGTTGTGGAAGCTC +
Preference number: 5 (lower is better)
Translates to: PYCLLHIHTTLHPTLCSISPIVI*EELWKL
Trigger: GAGCTTCCACAACTCTTCCAAGATGACTATGGGGCT...GATGGAGCAGAGAGTGGGGTGGAGCGTTGTGTGAATGTGAAGCAGGCAGTATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CAA 90 bp GAAGGACCCACGGAGTCTACAGAAAGCACAGAAACCCAGGCAATGGGGACACCATCGCAAGAGGCCCCATaGAAACAGGTACAAATCTGG +
Preference number: 5 (lower is better)
Translates to: EGPTESTESTETQAMGTPSQEAP*KQVQIW
Trigger: CCAGATTTGTACCTGTTTCAATGGGGCCTCTTGCGA...TGGTGTCCCCATTGCCTGGGTTTCTGTGCTTTCTGTAGACTCCGTGGGTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CAA 90 bp AAGTGCCACCTCTATCTTAGTCACCAGCAGAGGCCTGGGTCCCTTGGGCTGGAAGAGACACTTACAAATTaGTTCACAGCCTGGCCCATA +
Preference number: 5 (lower is better)
Translates to: KCHLYLSHQQRPGSLGLEETLTN*FTAWPI
Trigger: TATGGGCCAGGCTGTGAACAAATTTGTAAGTGTCTC...TTCCAGCCCAAGGGACCCAGGCCTCTGCTGGTGACTAAGATAGAGGTGGCACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CAA 90 bp GGTGCTTTAGAATTCCTCCTTCGTCCCCATACTGCCTGCTTCACATTCACACAAACATCTTGGCACGTTTaGCCATCACCCTGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: GALEFLLRPHTACFTFTQTSWHV*PSPCSW
Trigger: CCAGCTGCAGGGTGATGGCAAAACGTGCCAAGATGT...TTGTGTGAATGTGAAGCAGGCAGTATGGGGACGAAGGAGGAATTCTAAAGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS-3UTR CAA 90 bp GAAGGACCCACGGAGTCTACAGAAAGCACAGAAACCCAGGCAATGGGGACACCATCGCAGGTCCCACCATaGAGACACTTACAAATTTGT +
Preference number: 5 (lower is better)
Translates to: EGPTESTESTETQAMGTPSQVPP*RHLQIC
Trigger: ACAAATTTGTAAGTGTCTCAATGGTGGGACCTGCGA...TGGTGTCCCCATTGCCTGGGTTTCTGTGCTTTCTGTAGACTCCGTGGGTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS GCA 72 bp CCAGGGTCAGCTTCTGTTCTGCACACACGTGGGGCATaGTCGGCTGCAGCGGGCGCGGGGGTAGCGGCTGGG +
Preference number: 6 (lower is better)
Translates to: PGSASVLHTRGA*SAAAGAGVAAG
Trigger: CCCAGCCGCTACCCCCGCGCCCGCTGCAGCCGAGCATGCCCCACGTGTGTGCAGAACAGAAGCTGACCCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS GCA 72 bp CAGGGGCTTCTCCGGACACAGCGCCTGCCATCCTCCTaGAGCTGGTACTGGGGCCGGCACTGGCAGCGGTGC +
Preference number: 6 (lower is better)
Translates to: QGLLRTQRLPSS*SWYWGRHWQRC
Trigger: GCACCGCTGCCAGTGCCGGCCCCAGTACCAGCTGCAGGAGGATGGCAGGCGCTGTGTCCGGAGAAGCCCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CCA 72 bp GAGCCTGGCTCGCACTCCGCCTCGCAGCGCTCGCCCTaGAAGCCGGCCTTGCAGGAGCAGCTGCCATCCTTC +
Preference number: 6 (lower is better)
Translates to: EPGSHSASQRSP*KPALQEQLPSF
Trigger: GAAGGATGGCAGCTGCTCCTGCAAGGCCGGCTTCCAGGGCGAGCGCTGCGAGGCGGAGTGCGAGCCAGGCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS GCA 72 bp AGCTTCTGTTCTGCACACACGTGGGGCATGCTCGGCTaGAGCGGGCGCGGGGGTAGCGGCTGGGAGGCTGCA +
Preference number: 6 (lower is better)
Translates to: SFCSAHTWGMLG*SGRGGSGWEAA
Trigger: TGCAGCCTCCCAGCCGCTACCCCCGCGCCCGCTGCAGCCGAGCATGCCCCACGTGTGTGCAGAACAGAAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS GCA 72 bp AGGCTGGCGGTGGCCCACCAGGGTCAGCTTCTGTTCTaGACACACGTGGGGCATGCTCGGCTGCAGCGGGCG +
Preference number: 6 (lower is better)
Translates to: RLAVAHQGQLLF*THVGHARLQRA
Trigger: CGCCCGCTGCAGCCGAGCATGCCCCACGTGTGTGCAGAACAGAAGCTGACCCTGGTGGGCCACCGCCAGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS CCA 72 bp TGGCCCACCAGGGTCAGCTTCTGTTCTGCACACACGTaGGGCATGCTCGGCTGCAGCGGGCGCGGGGGTAGC +
Preference number: 6 (lower is better)
Translates to: WPTRVSFCSAHT*GMLGCSGRGGS
Trigger: GCTACCCCCGCGCCCGCTGCAGCCGAGCATGCCCCACGTGTGTGCAGAACAGAAGCTGACCCTGGTGGGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS CCA 72 bp CGGCAACCAGCCCCATGGTGTCCAGGAAGGCACTTCTaGGCACAGTGTGGGCCCCAGCGGCCAGCTGGGCAG +
Preference number: 6 (lower is better)
Translates to: RQPAPWCPGRHF*AQCGPQRPAGQ
Trigger: CTGCCCAGCTGGCCGCTGGGGCCCACACTGTGCCCAGAAGTGCCTTCCTGGACACCATGGGGCTGGTTGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152159.8
CDS GCA 72 bp TGCCGTCTGCACAGGGGCTTCTCCGGACACAGCGCCTaGCATCCTCCTGCAGCTGGTACTGGGGCCGGCACT +
Preference number: 6 (lower is better)
Translates to: CRLHRGFSGHSA*HPPAAGTGAGT
Trigger: AGTGCCGGCCCCAGTACCAGCTGCAGGAGGATGGCAGGCGCTGTGTCCGGAGAAGCCCCTGTGCAGACGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS GCA 72 bp CACAGGCCACACCTGGCCGGCAGGTGCAACGGTTTCTaGAGCCTGGCCCAAAGGAGCCTGGCTCGCACTCCG +
Preference number: 6 (lower is better)
Translates to: HRPHLAGRCNGF*SLAQRSLARTP
Trigger: CGGAGTGCGAGCCAGGCTCCTTTGGGCCAGGCTGCAGAAACCGTTGCACCTGCCGGCCAGGTGTGGCCTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CCA 72 bp GGTGCAACGGTTTCTGCAGCCTGGCCCAAAGGAGCCTaGCTCGCACTCCGCCTCGCAGCGCTCGCCCTGGAA +
Preference number: 6 (lower is better)
Translates to: GATVSAAWPKGA*LALRLAALALE
Trigger: TTCCAGGGCGAGCGCTGCGAGGCGGAGTGCGAGCCAGGCTCCTTTGGGCCAGGCTGCAGAAACCGTTGCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CCA 72 bp CCGCCCCTTGCCCGCATGTACACACGTGGGCACAGCTaGGGCCGAAGCGACCCTGTGGACAGGCAAGGCTAC +
Preference number: 6 (lower is better)
Translates to: PPLARMYTRGHS*GRSDPVDRQGY
Trigger: GTAGCCTTGCCTGTCCACAGGGTCGCTTCGGCCCCAGCTGTGCCCACGTGTGTACATGCGGGCAAGGGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030897.15
ENSMUST00000128700.3
ENSMUST00000152159.8
CDS CCA 72 bp GGGTCACATGCCGCCCCTTGCCCGCATGTACACACGTaGGCACAGCTGGGGCCGAAGCGACCCTGTGGACAG +
Preference number: 6 (lower is better)
Translates to: GSHAAPCPHVHT*AQLGPKRPCGQ
Trigger: CTGTCCACAGGGTCGCTTCGGCCCCAGCTGTGCCCACGTGTGTACATGCGGGCAAGGGGCGGCATGTGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030897.15
ENSMUST00000128700.3
ENSMUST00000152159.8
CDS GCA 72 bp ACAGTCCTGCGCTCTTGGCCAACACACCATGCCTGCTaGCCGCAGCCCGACCTCCACACAGGCACTACGCGG +
Preference number: 6 (lower is better)
Translates to: TVLRSWPTHHAC*PQPDLHTGTTR
Trigger: CCGCGTAGTGCCTGTGTGGAGGTCGGGCTGCGGGCAGCAGGCATGGTGTGTTGGCCAAGAGCGCAGGACTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS GCA 72 bp GGCCATCCAGGTCCACCACGGATTCTTCTAGGGGCGTaGAGCCCCTGCGGTCCTCATCCAGCCGGTAGCCAG +
Preference number: 6 (lower is better)
Translates to: GHPGPPRILLGA*SPCGPHPAGSQ
Trigger: CTGGCTACCGGCTGGATGAGGACCGCAGGGGCTGCACGCCCCTAGAAGAATCCGTGGTGGACCTGGATGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CCA 72 bp GCAAGTCTGGGCACAGTGTGGGCCCCAGCGGCCAGCTaGGCAGATGCACGAGCCAGTGACAGCATCACAGGG +
Preference number: 6 (lower is better)
Translates to: ASLGTVWAPAAS*ADARASDSITG
Trigger: CCCTGTGATGCTGTCACTGGCTCGTGCATCTGCCCAGCTGGCCGCTGGGGCCCACACTGTGCCCAGACTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS CCA 72 bp ACACACGTGGGCACAGCTGGGGCCGAAGCGACCCTGTaGACAGGCAAGGCTACAGTCGGCCCCAAGGAACCC +
Preference number: 6 (lower is better)
Translates to: THVGTAGAEATL*TGKATVGPKEP
Trigger: GGGTTCCTTGGGGCCGACTGTAGCCTTGCCTGTCCACAGGGTCGCTTCGGCCCCAGCTGTGCCCACGTGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030897.15
ENSMUST00000128700.3
ENSMUST00000152159.8
CDS CCA 72 bp GCACTTCTGGGCACAGTGTGGGCCCCAGCGGCCAGCTaGGCAGATGCACGAGCCAGTGACAGCATCACAGGG +
Preference number: 6 (lower is better)
Translates to: ALLGTVWAPAAS*ADARASDSITG
Trigger: CCCTGTGATGCTGTCACTGGCTCGTGCATCTGCCCAGCTGGCCGCTGGGGCCCACACTGTGCCCAGAAGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152159.8
CDS CAA 90 bp CTCAGGGTCGCAGCTGGCACCATGCTCACATGCAGGGCAGATCTCTaGACAGCCGAGCCCCCAACGGCCCTCGGGACAGTCGGCTCCACA +
Preference number: 6 (lower is better)
Translates to: LRVAAGTMLTCRADL*TAEPPTALGTVGST
Trigger: TGTGGAGCCGACTGTCCCGAGGGCCGTTGGGGGCTCGGCTGTCAAGAGATCTGCCCTGCATGTGAGCATGGTGCCAGCTGCGACCCTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS TCA 72 bp CAGCTGGCACCATGCTCACATGCAGGGCAGATCTCTTaGCAGCCGAGCCCCCAACGGCCCTCGGGACAGTCG +
Preference number: 6 (lower is better)
Translates to: QLAPCSHAGQIS*QPSPQRPSGQS
Trigger: CGACTGTCCCGAGGGCCGTTGGGGGCTCGGCTGTCAAGAGATCTGCCCTGCATGTGAGCATGGTGCCAGCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS TCA 72 bp TTCCTGCACGCCCTGGTGGGCAAAGGCAGAGGCCGCTaGTGGGATCACAGGGCACACCCGTGGGGCAGTTAC +
Preference number: 6 (lower is better)
Translates to: FLHALVGKGRGR*WDHRAHPWGSY
Trigger: GTAACTGCCCCACGGGTGTGCCCTGTGATCCCATCAGCGGCCTCTGCCTTTGCCCACCAGGGCGTGCAGGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS GCA 72 bp GGTCCACCACGGATTCTTCTAGGGGCGTGCAGCCCCTaGGGTCCTCATCCAGCCGGTAGCCAGCCTCACAGA +
Preference number: 6 (lower is better)
Translates to: GPPRILLGACSP*GPHPAGSQPHR
Trigger: TCTGTGAGGCTGGCTACCGGCTGGATGAGGACCGCAGGGGCTGCACGCCCCTAGAAGAATCCGTGGTGGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS GCA 72 bp GATAGCGATAGTGAGTGCTGGTGGCACTCCCCAGGCTaGCCAGAAGCCACCAGAGCATTGCCAGCCCGCCCC +
Preference number: 6 (lower is better)
Translates to: DSDSECWWHSPG*PEATRALPARP
Trigger: GGGGCGGGCTGGCAATGCTCTGGTGGCTTCTGGGCAGCCTGGGGAGTGCCACCAGCACTCACTATCGCTATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152159.8
CDS CCA 72 bp ACAGTCGGCTCCACAGTCCTCCCCAGTCTTCCCTGGTaGGCACAGACACTCCCCCGTGACTCGGTGACAGGG +
Preference number: 6 (lower is better)
Translates to: TVGSTVLPSLPW*AQTLPRDSVTG
Trigger: CCCTGTCACCGAGTCACGGGGGAGTGTCTGTGCCCACCAGGGAAGACTGGGGAGGACTGTGGAGCCGACTGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CCA 72 bp GGGACAGTCGGCTCCACAGTCCTCCCCAGTCTTCCCTaGTGGGCACAGACACTCCCCCGTGACTCGGTGACA +
Preference number: 6 (lower is better)
Translates to: GTVGSTVLPSLP*WAQTLPRDSVT
Trigger: TGTCACCGAGTCACGGGGGAGTGTCTGTGCCCACCAGGGAAGACTGGGGAGGACTGTGGAGCCGACTGTCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CCA 72 bp CTGCAGTTAAGCCCAAAGGTGAGAGGTGGGCAAGTCTaGGCACAGTGTGGGCCCCAGCGGCCAGCTGGGCAG +
Preference number: 6 (lower is better)
Translates to: LQLSPKVRGGQV*AQCGPQRPAGQ
Trigger: CTGCCCAGCTGGCCGCTGGGGCCCACACTGTGCCCAGACTTGCCCACCTCTCACCTTTGGGCTTAACTGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS CAA 72 bp CCGGCGAAGCAGCTACACTCATACCCACCGGGGGTGTaGGCACACACCTGCTGGCAGCACGGAGAGTTGGCG +
Preference number: 6 (lower is better)
Translates to: PAKQLHSYPPGV*AHTCWQHGELA
Trigger: CGCCAACTCTCCGTGCTGCCAGCAGGTGTGTGCCAACACCCCCGGTGGGTATGAGTGTAGCTGCTTCGCCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CAA 72 bp GCAGCTGGCACCATGCTCACATGCAGGGCAGATCTCTaGACAGCCGAGCCCCCAACGGCCCTCGGGACAGTC +
Preference number: 6 (lower is better)
Translates to: AAGTMLTCRADL*TAEPPTALGTV
Trigger: GACTGTCCCGAGGGCCGTTGGGGGCTCGGCTGTCAAGAGATCTGCCCTGCATGTGAGCATGGTGCCAGCTGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS TCA 72 bp GCACAGGGGCCCTGTGCTAGTGTGACTACAGCCGTGTaGGCAGCCTCCGTTGCCAGCCTCGCAGCTGTTCAC +
Preference number: 6 (lower is better)
Translates to: AQGPCASVTTAV*AASVASLAAVH
Trigger: GTGAACAGCTGCGAGGCTGGCAACGGAGGCTGCTCACACGGCTGTAGTCACACTAGCACAGGGCCCCTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS TCA 72 bp GGTGCCATGGTAACCAGCAGCACATACGCAGGCCCCTaGAGCAGGGTGGCAGGCCCAGGTCTCACCAGGACA +
Preference number: 6 (lower is better)
Translates to: GAMVTSSTYAGP*SRVAGPGLTRT
Trigger: TGTCCTGGTGAGACCTGGGCCTGCCACCCTGCTTCAGGGGCCTGCGTATGTGCTGCTGGTTACCATGGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS TCA 72 bp GCCCAGATGGGCATCCCTGCTCACAGCCAGGCCCAGTaGAGCCGGGTGGACAGTGGCACTCTCCAGAGACAT +
Preference number: 6 (lower is better)
Translates to: AQMGIPAHSQAQ*SRVDSGTLQRH
Trigger: ATGTCTCTGGAGAGTGCCACTGTCCACCCGGCTTCACTGGGCCTGGCTGTGAGCAGGGATGCCCATCTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128700.3
ENSMUST00000152159.8
CDS GCA 72 bp TACACAGTCCTGCGCTCTTGGCCAACACACCATGCCTaGTGCCCGCAGCCCGACCTCCACACAGGCACTACG +
Preference number: 6 (lower is better)
Translates to: YTVLRSWPTHHA*CPQPDLHTGTT
Trigger: CGTAGTGCCTGTGTGGAGGTCGGGCTGCGGGCAGCAGGCATGGTGTGTTGGCCAAGAGCGCAGGACTGTGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS GCA 72 bp ACTCCGCCTCGCAGCGCTCGCCCTGGAAGCCGGCCTTaGAGGAGCAGCTGCCATCCTTCGAGTTACAAGATC +
Preference number: 6 (lower is better)
Translates to: TPPRSARPGSRP*RSSCHPSSYKI
Trigger: GATCTTGTAACTCGAAGGATGGCAGCTGCTCCTGCAAGGCCGGCTTCCAGGGCGAGCGCTGCGAGGCGGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS GCA 72 bp CATCACAGGGGGCCCCGGCGGAGCAGTTGCAGGCACTaGCACAGTCTAACCCAAAGAAGCCAGCAGGACAGG +
Preference number: 6 (lower is better)
Translates to: HHRGPRRSSCRH*HSLTQRSQQDR
Trigger: CCTGTCCTGCTGGCTTCTTTGGGTTAGACTGTGGCAGTGCCTGCAACTGCTCCGCCGGGGCCCCCTGTGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS GCA 72 bp TGGCAGGCCCAGGTCTCACCAGGACATTGGCACGGGTaGTCACAGTCCTTGCCAAAGGTGCCAGGCTGGCAG +
Preference number: 6 (lower is better)
Translates to: WQAQVSPGHWHG*SQSLPKVPGWQ
Trigger: CTGCCAGCCTGGCACCTTTGGCAAGGACTGTGAGCACCCGTGCCAATGTCCTGGTGAGACCTGGGCCTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS GCA 72 bp GGGAGGACAGATGCAAGTCCCCGACACTGGGTCACATaGCGCCCCTTGCCCGCATGTACACACGTGGGCACA +
Preference number: 6 (lower is better)
Translates to: GRTDASPRHWVT*RPLPACTHVGT
Trigger: TGTGCCCACGTGTGTACATGCGGGCAAGGGGCGGCATGTGACCCAGTGTCGGGGACTTGCATCTGTCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030897.15
ENSMUST00000128700.3
ENSMUST00000152159.8
CDS CCA 72 bp GGCCAGTCCACCCAGGGGCACAGCTACAGCGTCCAGTaGCCGGATGGCAATGCCCATCATTGGCACAAGCAC +
Preference number: 6 (lower is better)
Translates to: GQSTQGHSYSVQ*PDGNAHHWHKH
Trigger: GTGCTTGTGCCAATGATGGGCATTGCCATCCGGCCACTGGACGCTGTAGCTGTGCCCCTGGGTGGACTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CCA 72 bp CAGGCCAAGCCGGTCCAACCCTCTGGGCACGTGCACTaGCCCAAGATGGGGTCACAGTTCCCTCCATTTCGG +
Preference number: 6 (lower is better)
Translates to: QAKPVQPSGHVH*PKMGSQFPPFR
Trigger: CCGAAATGGAGGGAACTGTGACCCCATCTTGGGCCAGTGCACGTGCCCAGAGGGTTGGACCGGCTTGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000128700.3
CDS CAA 72 bp CACTCCGCCTCGCAGCGCTCGCCCTGGAAGCCGGCCTaGCAGGAGCAGCTGCCATCCTTCGAGTTACAAGAT +
Preference number: 6 (lower is better)
Translates to: HSASQRSPWKPA*QEQLPSFELQD
Trigger: ATCTTGTAACTCGAAGGATGGCAGCTGCTCCTGCAAGGCCGGCTTCCAGGGCGAGCGCTGCGAGGCGGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CAA 90 bp TGGGCAAGGCCCCGGAGTTCCTGGCATGTATGCATACAGCCACCATaGCCGTCTGCACAGGGGCTTCTCCGGACACAGCGCCTGCCATCC +
Preference number: 6 (lower is better)
Translates to: WARPRSSWHVCIQPP*PSAQGLLRTQRLPS
Trigger: GGATGGCAGGCGCTGTGTCCGGAGAAGCCCCTGTGCAGACGGCAATGGTGGCTGTATGCATACATGCCAGGAACTCCGGGGCCTTGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CAA 90 bp CCTGGCTCGCACTCCGCCTCGCAGCGCTCGCCCTGGAAGCCGGCCTaGCAGGAGCAGCTGCCATCCTTCGAGTTACAAGATCTTGTGTGT +
Preference number: 6 (lower is better)
Translates to: PGSHSASQRSPWKPA*QEQLPSFELQDLVC
Trigger: ACACACAAGATCTTGTAACTCGAAGGATGGCAGCTGCTCCTGCAAGGCCGGCTTCCAGGGCGAGCGCTGCGAGGCGGAGTGCGAGCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CAA 90 bp GGGGCACAGCTACAGCGTCCAGTGGCCGGATGGCAATGCCCATCATaGGCACAAGCACACCTCATCTGGCAGCCGGTCCCAAACCAGCCT +
Preference number: 6 (lower is better)
Translates to: GAQLQRPVAGWQCPS*AQAHLIWQPVPNQP
Trigger: AGGCTGGTTTGGGACCGGCTGCCAGATGAGGTGTGCTTGTGCCAATGATGGGCATTGCCATCCGGCCACTGGACGCTGTAGCTGTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CAA 90 bp ATGCTCACACCTGCACTTCTGCTCGCAGCCGGGCCCAAAGTAGCCTaGGCGACACCACTGCTCACACTGCGGACCTTCGTAGCCAGCCTC +
Preference number: 6 (lower is better)
Translates to: MLTPALLLAAGPKVA*ATPLLTLRTFVASL
Trigger: GAGGCTGGCTACGAAGGTCCGCAGTGTGAGCAGTGGTGTCGCCAAGGCTACTTTGGGCCCGGCTGCGAGCAGAAGTGCAGGTGTGAGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CAA 90 bp ATGCACGAGCCAGTGACAGCATCACAGGGGGCCCCGGCGGAGCAGTaGCAGGCACTGCCACAGTCTAACCCAAAGAAGCCAGCAGGACAG +
Preference number: 6 (lower is better)
Translates to: MHEPVTASQGAPAEQ*QALPQSNPKKPAGQ
Trigger: CTGTCCTGCTGGCTTCTTTGGGTTAGACTGTGGCAGTGCCTGCAACTGCTCCGCCGGGGCCCCCTGTGATGCTGTCACTGGCTCGTGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CAA 90 bp GCAACCAGATCCATGGAAGCCGGCAGGGCAGGTGTCTTCACAAGCTaGACCATAGAAGCCAGGGCCACAGAGGCAAGCGCCGGAGGTGGG +
Preference number: 6 (lower is better)
Translates to: ATRSMEAGRAGVFTS*TIEARATEASAGGG
Trigger: CCCACCTCCGGCGCTTGCCTCTGTGGCCCTGGCTTCTATGGTCAAGCTTGTGAAGACACCTGCCCTGCCGGCTTCCATGGATCTGGTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000128700.3
CDS TCA 72 bp ACTGGGGCCGGCACTGGCAGCGGTGCTGTGTCACGGTaGGCTGTACACACTGATGCTGGCAGCCACCATTTC +
Preference number: 6 (lower is better)
Translates to: TGAGTGSGAVSR*AVHTDAGSHHF
Trigger: GAAATGGTGGCTGCCAGCATCAGTGTGTACAGCTCACCGTGACACAGCACCGCTGCCAGTGCCGGCCCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS GCA 72 bp ATAGTACACAGTCCTGCGCTCTTGGCCAACACACCATaGCTGCTGCCCGCAGCCCGACCTCCACACAGGCAC +
Preference number: 6 (lower is better)
Translates to: IVHSPALLANTP*LLPAARPPHRH
Trigger: GTGCCTGTGTGGAGGTCGGGCTGCGGGCAGCAGGCATGGTGTGTTGGCCAAGAGCGCAGGACTGTGTACTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS GCA 72 bp CCCGGAGTTCCTGGCATGTATGCATACAGCCACCATTaGCGTCTGCACAGGGGCTTCTCCGGACACAGCGCC +
Preference number: 6 (lower is better)
Translates to: PGVPGMYAYSHH*RLHRGFSGHSA
Trigger: GGCGCTGTGTCCGGAGAAGCCCCTGTGCAGACGGCAATGGTGGCTGTATGCATACATGCCAGGAACTCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS GCA 72 bp CTACACTCATACCCACCGGGGGTGTTGGCACACACCTaGTGGCAGCACGGAGAGTTGGCGCAGTCGTCGATG +
Preference number: 6 (lower is better)
Translates to: LHSYPPGVLAHT*WQHGELAQSSM
Trigger: CATCGACGACTGCGCCAACTCTCCGTGCTGCCAGCAGGTGTGTGCCAACACCCCCGGTGGGTATGAGTGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS GCA 72 bp TCCAGTCTCAGGGTCGCAGCTGGCACCATGCTCACATaGAGGGCAGATCTCTTGACAGCCGAGCCCCCAACG +
Preference number: 6 (lower is better)
Translates to: SSLRVAAGTMLT*RADLLTAEPPT
Trigger: CGTTGGGGGCTCGGCTGTCAAGAGATCTGCCCTGCATGTGAGCATGGTGCCAGCTGCGACCCTGAGACTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS GCA 72 bp AGTTCCCATGGCCTGCACTGCAGTTGCAGGGGTGGATaGAGTCAGGCCCCCAGTGTCCACTGTCACAGGCTC +
Preference number: 6 (lower is better)
Translates to: SSHGLHCSCRGG*SQAPSVHCHRL
Trigger: GAGCCTGTGACAGTGGACACTGGGGGCCTGACTGCATCCACCCCTGCAACTGCAGTGCAGGCCATGGGAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS GCA 72 bp TCTCACAGGCCAAGCCGGTCCAACCCTCTGGGCACGTaGACTGGCCCAAGATGGGGTCACAGTTCCCTCCAT +
Preference number: 6 (lower is better)
Translates to: SHRPSRSNPLGT*TGPRWGHSSLH
Trigger: ATGGAGGGAACTGTGACCCCATCTTGGGCCAGTGCACGTGCCCAGAGGGTTGGACCGGCTTGGCCTGTGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000128700.3
CDS CCA 72 bp ACAGGCACTACGCGGCTGAAGGCTTGCACACAAGGCTaGCGGTGGCCCACCAGGGTCAGCTTCTGTTCTGCA +
Preference number: 6 (lower is better)
Translates to: TGTTRLKACTQG*RWPTRVSFCSA
Trigger: TGCAGAACAGAAGCTGACCCTGGTGGGCCACCGCCAGCCTTGTGTGCAAGCCTTCAGCCGCGTAGTGCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS CCA 72 bp CCACGGTGTTGCAGCACGGGCCCTCACAGCCCCCGTTaGCATTGGCACATTCATCCACATCTGAGAGGCAGC +
Preference number: 6 (lower is better)
Translates to: PRCCSTGPHSPR*HWHIHPHLRGS
Trigger: GCTGCCTCTCAGATGTGGATGAATGTGCCAATGCCAACGGGGGCTGTGAGGGCCCGTGCTGCAACACCGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS CCA 72 bp CGGTCCAACCCTCTGGGCACGTGCACTGGCCCAAGATaGGGTCACAGTTCCCTCCATTTCGGCAGAGACAGG +
Preference number: 6 (lower is better)
Translates to: RSNPLGTCTGPR*GHSSLHFGRDR
Trigger: CCTGTCTCTGCCGAAATGGAGGGAACTGTGACCCCATCTTGGGCCAGTGCACGTGCCCAGAGGGTTGGACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000128700.3
CDS CCA 72 bp GCACTCGTTCTCACAGGCCAAGCCGGTCCAACCCTCTaGGCACGTGCACTGGCCCAAGATGGGGTCACAGTT +
Preference number: 6 (lower is better)
Translates to: ALVLTGQAGPTL*ARALAQDGVTV
Trigger: AACTGTGACCCCATCTTGGGCCAGTGCACGTGCCCAGAGGGTTGGACCGGCTTGGCCTGTGAGAACGAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000128700.3
CDS CCA 72 bp GCAGGGGCTCTGACACTTGTCCCCAGTCCAGCCAGTTaGGCAGCGGCAGTGGCCAGTAAGACGGTCACATGT +
Preference number: 6 (lower is better)
Translates to: AGALTLVPSPAS*AAAVASKTVTC
Trigger: ACATGTGACCGTCTTACTGGCCACTGCCGCTGCCCAACTGGCTGGACTGGGGACAAGTGTCAGAGCCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS CCA 72 bp GAAGCAGGGTGGCAGGCCCAGGTCTCACCAGGACATTaGCACGGGTGCTCACAGTCCTTGCCAAAGGTGCCA +
Preference number: 6 (lower is better)
Translates to: EAGWQAQVSPGH*HGCSQSLPKVP
Trigger: TGGCACCTTTGGCAAGGACTGTGAGCACCCGTGCCAATGTCCTGGTGAGACCTGGGCCTGCCACCCTGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS CCA 72 bp GCACACTTGTGTTCACAGCCCTTGCCAAACCGGTCCTaGGGACAGCCGCGCTCACAATGGCCTCCCGTCTTC +
Preference number: 6 (lower is better)
Translates to: AHLCSQPLPNRS*GQPRSQWPPVF
Trigger: GAAGACGGGAGGCCATTGTGAGCGCGGCTGTCCCCAGGACCGGTTTGGCAAGGGCTGTGAACACAAGTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030897.15
ENSMUST00000128700.3
ENSMUST00000152159.8
CDS CAA 72 bp CCCACGGTGTTGCAGCACGGGCCCTCACAGCCCCCGTaGGCATTGGCACATTCATCCACATCTGAGAGGCAG +
Preference number: 6 (lower is better)
Translates to: PTVLQHGPSQPP*ALAHSSTSERQ
Trigger: CTGCCTCTCAGATGTGGATGAATGTGCCAATGCCAACGGGGGCTGTGAGGGCCCGTGCTGCAACACCGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS CAA 72 bp CCCCGGAGTTCCTGGCATGTATGCATACAGCCACCATaGCCGTCTGCACAGGGGCTTCTCCGGACACAGCGC +
Preference number: 6 (lower is better)
Translates to: PRSSWHVCIQPP*PSAQGLLRTQR
Trigger: GCGCTGTGTCCGGAGAAGCCCCTGTGCAGACGGCAATGGTGGCTGTATGCATACATGCCAGGAACTCCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CAA 72 bp CCTGCACTTCTGCTCGCAGCCGGGCCCAAAGTAGCCTaGGCGACACCACTGCTCACACTGCGGACCTTCGTA +
Preference number: 6 (lower is better)
Translates to: PALLLAAGPKVA*ATPLLTLRTFV
Trigger: TACGAAGGTCCGCAGTGTGAGCAGTGGTGTCGCCAAGGCTACTTTGGGCCCGGCTGCGAGCAGAAGTGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CAA 72 bp CCCCCATTCCTGCAGGCACACTTGTGTTCACAGCCCTaGCCAAACCGGTCCTGGGGACAGCCGCGCTCACAA +
Preference number: 6 (lower is better)
Translates to: PPFLQAHLCSQP*PNRSWGQPRSQ
Trigger: TTGTGAGCGCGGCTGTCCCCAGGACCGGTTTGGCAAGGGCTGTGAACACAAGTGTGCCTGCAGGAATGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000030897.15
ENSMUST00000128700.3
ENSMUST00000152159.8
CDS CAA 90 bp TACCCACCGGGGGTGTTGGCACACACCTGCTGGCAGCACGGAGAGTaGGCGCAGTCGTCGATGTCAATGCAGGTCTTCTGGTCCTCATCC +
Preference number: 6 (lower is better)
Translates to: YPPGVLAHTCWQHGE*AQSSMSMQVFWSSS
Trigger: GGATGAGGACCAGAAGACCTGCATTGACATCGACGACTGCGCCAACTCTCCGTGCTGCCAGCAGGTGTGTGCCAACACCCCCGGTGGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS GCA 72 bp GGGGCACAGCTACAGCGTCCAGTGGCCGGATGGCAATaGCCATCATTGGCACAAGCACACCTCATCTGGCAG +
Preference number: 6 (lower is better)
Translates to: GAQLQRPVAGWQ*PSLAQAHLIWQ
Trigger: CTGCCAGATGAGGTGTGCTTGTGCCAATGATGGGCATTGCCATCCGGCCACTGGACGCTGTAGCTGTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CCA 72 bp GCACGTTTTGCCATCACCCTGCAGCTGGTAGCCGGGTaGGCAGCGACAGTAAAAGCCACCCACGGTGTTGCA +
Preference number: 6 (lower is better)
Translates to: ARFAITLQLVAG*AATVKATHGVA
Trigger: TGCAACACCGTGGGTGGCTTTTACTGTCGCTGCCCACCCGGCTACCAGCTGCAGGGTGATGGCAAAACGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS CCA 72 bp CAGCCGGTCCCAAACCAGCCTGCTGGGCAAGCATCCTaGCAGCGGCTACCAACAAAACCAGGAAGACACAGG +
Preference number: 6 (lower is better)
Translates to: QPVPNQPAGQAS*QRLPTKPGRHR
Trigger: CCTGTGTCTTCCTGGTTTTGTTGGTAGCCGCTGCCAGGATGCTTGCCCAGCAGGCTGGTTTGGGACCGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CCA 72 bp ACAAATCTGGCTGCAGTTAAGCCCAAAGGTGAGAGGTaGGCAAGTCTGGGCACAGTGTGGGCCCCAGCGGCC +
Preference number: 6 (lower is better)
Translates to: TNLAAVKPKGER*ASLGTVWAPAA
Trigger: GGCCGCTGGGGCCCACACTGTGCCCAGACTTGCCCACCTCTCACCTTTGGGCTTAACTGCAGCCAGATTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS CCA 72 bp CACTTGTCCCCAGTCCAGCCAGTTGGGCAGCGGCAGTaGCCAGTAAGACGGTCACATGTGCCCCCATTAAGG +
Preference number: 6 (lower is better)
Translates to: HLSPVQPVGQRQ*PVRRSHVPPLR
Trigger: CCTTAATGGGGGCACATGTGACCGTCTTACTGGCCACTGCCGCTGCCCAACTGGCTGGACTGGGGACAAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000030897.15
ENSMUST00000128700.3
ENSMUST00000152159.8
CDS CCA 72 bp GCCCAAAGCGGCCTCTTCTGCAATCTAGGTCACATGTaGTTCCTGCACGCCCTGGTGGGCAAAGGCAGAGGC +
Preference number: 6 (lower is better)
Translates to: AQSGLFCNLGHM*FLHALVGKGRG
Trigger: GCCTCTGCCTTTGCCCACCAGGGCGTGCAGGAACCACATGTGACCTAGATTGCAGAAGAGGCCGCTTTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS CCA 72 bp ACAGGGGCTCTGACACTTGTCCCCAGTCCAGCCAGTTaGGCAGCGGCAGTGGCCAGTAAGACGGTCACATGT +
Preference number: 6 (lower is better)
Translates to: TGALTLVPSPAS*AAAVASKTVTC
Trigger: ACATGTGACCGTCTTACTGGCCACTGCCGCTGCCCAACTGGCTGGACTGGGGACAAGTGTCAGAGCCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000128700.3
ENSMUST00000152159.8
CDS CAA 72 bp GGGGTGTTGGCACACACCTGCTGGCAGCACGGAGAGTaGGCGCAGTCGTCGATGTCAATGCAGGTCTTCTGG +
Preference number: 6 (lower is better)
Translates to: GVLAHTCWQHGE*AQSSMSMQVFW
Trigger: CCAGAAGACCTGCATTGACATCGACGACTGCGCCAACTCTCCGTGCTGCCAGCAGGTGTGTGCCAACACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CAA 72 bp CTCCGCCACAGCCTCCTCCTCAGCCCCATAGTCATCTaGGAAGAGTTGTGGAAGCTCATCCCCCAGCACCGC +
Preference number: 6 (lower is better)
Translates to: LRHSLLLSPIVI*EELWKLIPQHR
Trigger: GCGGTGCTGGGGGATGAGCTTCCACAACTCTTCCAAGATGACTATGGGGCTGAGGAGGAGGCTGTGGCGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CAA 72 bp CTACAGCGTCCAGTGGCCGGATGGCAATGCCCATCATaGGCACAAGCACACCTCATCTGGCAGCCGGTCCCA +
Preference number: 6 (lower is better)
Translates to: LQRPVAGWQCPS*AQAHLIWQPVP
Trigger: TGGGACCGGCTGCCAGATGAGGTGTGCTTGTGCCAATGATGGGCATTGCCATCCGGCCACTGGACGCTGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CAA 72 bp TCCATGGAAGCCGGCAGGGCAGGTGTCTTCACAAGCTaGACCATAGAAGCCAGGGCCACAGAGGCAAGCGCC +
Preference number: 6 (lower is better)
Translates to: SMEAGRAGVFTS*TIEARATEASA
Trigger: GGCGCTTGCCTCTGTGGCCCTGGCTTCTATGGTCAAGCTTGTGAAGACACCTGCCCTGCCGGCTTCCATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000128700.3
CDS CAA 90 bp GGCATACACCTGCCTGTAGCTCATATAGTACACAGTCCTGCGCTCTaGGCCAACACACCATGCCTGCTGCCCGCAGCCCGACCTCCACAC +
Preference number: 6 (lower is better)
Translates to: GIHLPVAHIVHSPAL*ANTPCLLPAARPPH
Trigger: GTGTGGAGGTCGGGCTGCGGGCAGCAGGCATGGTGTGTTGGCCAAGAGCGCAGGACTGTGTACTATATGAGCTACAGGCAGGTGTATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS TCA 72 bp ACAGCCCCCGTTGGCATTGGCACATTCATCCACATCTaGGAGGCAGCCTTCCTGGCCAGGCTTCTGGCTCCA +
Preference number: 6 (lower is better)
Translates to: TAPVGIGTFIHI*EAAFLARLLAP
Trigger: TGGAGCCAGAAGCCTGGCCAGGAAGGCTGCCTCTCAGATGTGGATGAATGTGCCAATGCCAACGGGGGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS GCA 72 bp AGGTCCTGCCATCTGTGTGGAGCCGGAAGCCGGGTTTaGACTCACAGAGGTAAGAGCCGGGGGTATTCACAC +
Preference number: 6 (lower is better)
Translates to: RSCHLCGAGSRV*THRGKSRGYSH
Trigger: GTGTGAATACCCCCGGCTCTTACCTCTGTGAGTGCAAACCCGGCTTCCGGCTCCACACAGATGGCAGGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS GCA 72 bp ATGGGTAGCAGTTCCTCCACAGATAGCGATAGTGAGTaGTGGTGGCACTCCCCAGGCTGCCCAGAAGCCACC +
Preference number: 6 (lower is better)
Translates to: MGSSSSTDSDSE*WWHSPGCPEAT
Trigger: GGTGGCTTCTGGGCAGCCTGGGGAGTGCCACCAGCACTCACTATCGCTATCTGTGGAGGAACTGCTACCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152159.8
CDS CCA 72 bp TGTTGCAGCACGGGCCCTCACAGCCCCCGTTGGCATTaGCACATTCATCCACATCTGAGAGGCAGCCTTCCT +
Preference number: 6 (lower is better)
Translates to: CCSTGPHSPRWH*HIHPHLRGSLP
Trigger: AGGAAGGCTGCCTCTCAGATGTGGATGAATGTGCCAATGCCAACGGGGGCTGTGAGGGCCCGTGCTGCAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS CCA 72 bp GGGTGTTGGCACACACCTGCTGGCAGCACGGAGAGTTaGCGCAGTCGTCGATGTCAATGCAGGTCTTCTGGT +
Preference number: 6 (lower is better)
Translates to: GCWHTPAGSTES*RSRRCQCRSSG
Trigger: ACCAGAAGACCTGCATTGACATCGACGACTGCGCCAACTCTCCGTGCTGCCAGCAGGTGTGTGCCAACACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CCA 72 bp TGGCAATGCCCATCATTGGCACAAGCACACCTCATCTaGCAGCCGGTCCCAAACCAGCCTGCTGGGCAAGCA +
Preference number: 6 (lower is better)
Translates to: WQCPSLAQAHLI*QPVPNQPAGQA
Trigger: TGCTTGCCCAGCAGGCTGGTTTGGGACCGGCTGCCAGATGAGGTGTGCTTGTGCCAATGATGGGCATTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CCA 72 bp TACAGCGTCCAGTGGCCGGATGGCAATGCCCATCATTaGCACAAGCACACCTCATCTGGCAGCCGGTCCCAA +
Preference number: 6 (lower is better)
Translates to: YSVQWPDGNAHH*HKHTSSGSRSQ
Trigger: TTGGGACCGGCTGCCAGATGAGGTGTGCTTGTGCCAATGATGGGCATTGCCATCCGGCCACTGGACGCTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CCA 72 bp CATAGAAGCCAGGGCCACAGAGGCAAGCGCCGGAGGTaGGCTCACAGCTGCCATTGTTCTGACAGGAACACT +
Preference number: 6 (lower is better)
Translates to: HRSQGHRGKRRR*AHSCHCSDRNT
Trigger: AGTGTTCCTGTCAGAACAATGGCAGCTGTGAGCCCACCTCCGGCGCTTGCCTCTGTGGCCCTGGCTTCTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030897.15
ENSMUST00000128700.3
ENSMUST00000152159.8
CDS CCA 72 bp AGCAGTTCCTCCACAGATAGCGATAGTGAGTGCTGGTaGCACTCCCCAGGCTGCCCAGAAGCCACCAGAGCA +
Preference number: 6 (lower is better)
Translates to: SSSSTDSDSECW*HSPGCPEATRA
Trigger: TGCTCTGGTGGCTTCTGGGCAGCCTGGGGAGTGCCACCAGCACTCACTATCGCTATCTGTGGAGGAACTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152159.8
CDS CCA 72 bp GGTAGCAGTTCCTCCACAGATAGCGATAGTGAGTGCTaGTGGCACTCCCCAGGCTGCCCAGAAGCCACCAGA +
Preference number: 6 (lower is better)
Translates to: GSSSSTDSDSEC*WHSPGCPEATR
Trigger: TCTGGTGGCTTCTGGGCAGCCTGGGGAGTGCCACCAGCACTCACTATCGCTATCTGTGGAGGAACTGCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152159.8
CDS CCA 72 bp GGTGCTCACGGGGTAGCCGGTCTGGCTCAGGTGGCATaGGTAGCAGTTCCTCCACAGATAGCGATAGTGAGT +
Preference number: 6 (lower is better)
Translates to: GAHGVAGLAQVA*VAVPPQIAIVS
Trigger: ACTCACTATCGCTATCTGTGGAGGAACTGCTACCCATGCCACCTGAGCCAGACCGGCTACCCCGTGAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152159.8
CDS CCA 72 bp GTGATCGACATTCATCCACATCTGGCCTCTGGTCATTaGTGCTCACGGGGTAGCCGGTCTGGCTCAGGTGGC +
Preference number: 6 (lower is better)
Translates to: VIDIHPHLASGH*CSRGSRSGSGG
Trigger: GCCACCTGAGCCAGACCGGCTACCCCGTGAGCACCAATGACCAGAGGCCAGATGTGGATGAATGTCGATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152159.8
CDS CAA 90 bp TGGCCAGTAAGACGGTCACATGTGCCCCCATTAAGGCAACTGCAGTaGAGCCGGCAACCAGCCCCATGGTGTCCAGGAAGGCACTCGTTC +
Preference number: 6 (lower is better)
Translates to: WPVRRSHVPPLRQLQ*SRQPAPWCPGRHSF
Trigger: GAACGAGTGCCTTCCTGGACACCATGGGGCTGGTTGCCGGCTCAACTGCAGTTGCCTTAATGGGGGCACATGTGACCGTCTTACTGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000128700.3
CDS CAA 90 bp TGGCCAGTAAGACGGTCACATGTGCCCCCATTAAGGCAACTGCAGTaGAGCCGGCAACCAGCCCCATGGTGTCCAGGAAGGCACTTCTGG +
Preference number: 6 (lower is better)
Translates to: WPVRRSHVPPLRQLQ*SRQPAPWCPGRHFW
Trigger: CCAGAAGTGCCTTCCTGGACACCATGGGGCTGGTTGCCGGCTCAACTGCAGTTGCCTTAATGGGGGCACATGTGACCGTCTTACTGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000152159.8
CDS CAA 90 bp TCCCGTGGCTGGATCGCAGGTCCCACCATTGAGACACTTACAAATTaGTTCACAGCCTGGCCCATAGCGCCCAGATGGGCATCCCTGCTC +
Preference number: 6 (lower is better)
Translates to: SRGWIAGPTIETLTN*FTAWPIAPRWASLL
Trigger: GAGCAGGGATGCCCATCTGGGCGCTATGGGCCAGGCTGTGAACAAATTTGTAAGTGTCTCAATGGTGGGACCTGCGATCCAGCCACGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128700.3
ENSMUST00000152159.8
CDS TCA 72 bp GGCCGAAGGAGTGATCCAAGCAGACAAACTTCTCAGTaGGAGTGTGTTCTCCCCGCAGCTCCGCCACAGCCT +
Preference number: 6 (lower is better)
Translates to: GRRSDPSRQTSQ*ECVLPAAPPQP
Trigger: AGGCTGTGGCGGAGCTGCGGGGAGAACACACTCTCACTGAGAAGTTTGTCTGCTTGGATCACTCCTTCGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS GCA 72 bp GGCACATTCGTCCACATCTTCACAGGCTTTGCGGTCTaGAGCAAGCTGGTAACCTGGGTGGCAGCCACAGTG +
Preference number: 6 (lower is better)
Translates to: GTFVHIFTGFAV*SKLVTWVAATV
Trigger: CACTGTGGCTGCCACCCAGGTTACCAGCTTGCTGCAGACCGCAAAGCCTGTGAAGATGTGGACGAATGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS GCA 72 bp GACCCAAGGCACATTCGTCCACATCTTCACAGGCTTTaGGGTCTGCAGCAAGCTGGTAACCTGGGTGGCAGC +
Preference number: 6 (lower is better)
Translates to: DPRHIRPHLHRL*GLQQAGNLGGS
Trigger: GCTGCCACCCAGGTTACCAGCTTGCTGCAGACCGCAAAGCCTGTGAAGATGTGGACGAATGTGCCTTGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS GCA 72 bp AGCGCTCGCCCTGGAAGCCGGCCTTGCAGGAGCAGCTaGCATCCTTCGAGTTACAAGATCTTGTGTGTGACT +
Preference number: 6 (lower is better)
Translates to: SARPGSRPCRSS*HPSSYKILCVT
Trigger: AGTCACACACAAGATCTTGTAACTCGAAGGATGGCAGCTGCTCCTGCAAGGCCGGCTTCCAGGGCGAGCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CCA 72 bp TTAAGGCAACTGCAGTTGAGCCGGCAACCAGCCCCATaGTGTCCAGGAAGGCACTCGTTCTCACAGGCCAAG +
Preference number: 6 (lower is better)
Translates to: LRQLQLSRQPAP*CPGRHSFSQAK
Trigger: CTTGGCCTGTGAGAACGAGTGCCTTCCTGGACACCATGGGGCTGGTTGCCGGCTCAACTGCAGTTGCCTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000128700.3
CDS CAA 72 bp AGCCTCCTCCTCAGCCCCATAGTCATCTTGGAAGAGTaGTGGAAGCTCATCCCCCAGCACCGCAATGTGGGG +
Preference number: 6 (lower is better)
Translates to: SLLLSPIVILEE*WKLIPQHRNVG
Trigger: CCCCACATTGCGGTGCTGGGGGATGAGCTTCCACAACTCTTCCAAGATGACTATGGGGCTGAGGAGGAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CAA 72 bp GTCACATGTGGTTCCTGCACGCCTGTCTTCACAAGCTaGACCATAGAAGCCAGGGCCACAGAGGCAAGCGCC +
Preference number: 6 (lower is better)
Translates to: VTCGSCTPVFTS*TIEARATEASA
Trigger: GGCGCTTGCCTCTGTGGCCCTGGCTTCTATGGTCAAGCTTGTGAAGACAGGCGTGCAGGAACCACATGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152159.8
CDS CAA 90 bp AGCCGGCCTTGCAGGAGCAGCTGCCATCCTTCGAGTTACAAGATCTaGTGTGTGACTGCTCACAAAGGCAGTCCTCAGAACAGCCCGGTC +
Preference number: 6 (lower is better)
Translates to: SRPCRSSCHPSSYKI*CVTAHKGSPQNSPV
Trigger: GACCGGGCTGTTCTGAGGACTGCCTTTGTGAGCAGTCACACACAAGATCTTGTAACTCGAAGGATGGCAGCTGCTCCTGCAAGGCCGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CAA 90 bp TCCCGTGGCTGGATCGCAGGTCCCACCATTGAGACACTTACAAATTaGTTCACAGCCTGGCCCATAGCGCCCAGATGGGCATCGTTGCTG +
Preference number: 6 (lower is better)
Translates to: SRGWIAGPTIETLTN*FTAWPIAPRWASLL
Trigger: CAGCAACGATGCCCATCTGGGCGCTATGGGCCAGGCTGTGAACAAATTTGTAAGTGTCTCAATGGTGGGACCTGCGATCCAGCCACGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS TCA 72 bp TCACAGTTCCCTCCATTTCGGCAGAGACAGGAATGCTaGCAGTTCTTGCCATACAGGCCAGCAGGGCAGGCC +
Preference number: 6 (lower is better)
Translates to: SQFPPFRQRQEC*QFLPYRPAGQA
Trigger: GGCCTGCCCTGCTGGCCTGTATGGCAAGAACTGTCAGCATTCCTGTCTCTGCCGAAATGGAGGGAACTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS GCA 72 bp TGTGTGATCGACATTCATCCACATCTTGGCACGTTTTaGCATCACCCTGCAGCTGGTAGCCGGGTGGGCAGC +
Preference number: 6 (lower is better)
Translates to: CVIDIHPHLGTF*HHPAAGSRVGS
Trigger: GCTGCCCACCCGGCTACCAGCTGCAGGGTGATGGCAAAACGTGCCAAGATGTGGATGAATGTCGATCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS GCA 72 bp GGCAGCACGGAGAGTTGGCGCAGTCGTCGATGTCAATaGAGGTCTTCTGGTCCTCATCCAGCTCATAACCAC +
Preference number: 6 (lower is better)
Translates to: GSTESWRSRRCQ*RSSGPHPAHNH
Trigger: GTGGTTATGAGCTGGATGAGGACCAGAAGACCTGCATTGACATCGACGACTGCGCCAACTCTCCGTGCTGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS GCA 72 bp TTAGTGCTTCATGGCCTTGCTGCTGGAGTGCTGGGGTaGTGGTCTGATAGAGGACAGCTGTGTGGGCACTTC +
Preference number: 6 (lower is better)
Translates to: LVLHGLAAGVLG*WSDRGQLCGHF
Trigger: GAAGTGCCCACACAGCTGTCCTCTATCAGACCAGCACCCCAGCACTCCAGCAGCAAGGCCATGAAGCACTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS GCA 72 bp GTAACACTGCCGGCCATCAGCACCCAGCTCATAGCCTaGGTGACACACACACTTAAAGGACCCCTGAGTGTT +
Preference number: 6 (lower is better)
Translates to: VTLPAISTQLIA*VTHTLKGPLSV
Trigger: AACACTCAGGGGTCCTTTAAGTGTGTGTGTCACGCAGGCTATGAGCTGGGTGCTGATGGCCGGCAGTGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CCA 72 bp ACAAATTTGTTCACAGCCTGGCCCATAGCGCCCAGATaGGCATCGTTGCTGACAGTCGGTGCCATGGTAACC +
Preference number: 6 (lower is better)
Translates to: TNLFTAWPIAPR*ASLLTVGAMVT
Trigger: GGTTACCATGGCACCGACTGTCAGCAACGATGCCCATCTGGGCGCTATGGGCCAGGCTGTGAACAAATTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS CAA 72 bp TGGCACTGCCCAAGGACAGGGTCGCAAGAGGCCCCATaGAAACAGGTACAAATCTGGCTGCAGTTAAGCCCA +
Preference number: 6 (lower is better)
Translates to: WHCPRTGSQEAP*KQVQIWLQLSP
Trigger: TGGGCTTAACTGCAGCCAGATTTGTACCTGTTTCAATGGGGCCTCTTGCGACCCTGTCCTTGGGCAGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS CCA 72 bp GCCCAAAGCGGCCTCTTCTGCAATCTAGGTCACATGTaGTTCCTGCACGCCTGTCTTCACAAGCTTGACCAT +
Preference number: 6 (lower is better)
Translates to: AQSGLFCNLGHM*FLHACLHKLDH
Trigger: ATGGTCAAGCTTGTGAAGACAGGCGTGCAGGAACCACATGTGACCTAGATTGCAGAAGAGGCCGCTTTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152159.8
CDS CCA 72 bp CCCACCATTGAGACACTTACAAATTTGTTCACAGCCTaGCCCATAGCGCCCAGATGGGCATCGTTGCTGACA +
Preference number: 6 (lower is better)
Translates to: PTIETLTNLFTA*PIAPRWASLLT
Trigger: TGTCAGCAACGATGCCCATCTGGGCGCTATGGGCCAGGCTGTGAACAAATTTGTAAGTGTCTCAATGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030897.15
CDS CCA 72 bp GATGCAGGGAGAGCTACAGTTCTTCCCAAAAGTGTCTaGAGGACAAGTCTCATTGCAGATGATCCCGGTCCA +
Preference number: 6 (lower is better)
Translates to: DAGRATVLPKSV*RTSLIADDPGP
Trigger: TGGACCGGGATCATCTGCAATGAGACTTGTCCTCCAGACACTTTTGGGAAGAACTGTAGCTCTCCCTGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8
CDS CAA 72 bp TGCAGGAGCAGCTGCCATCCTTCGAGTTACAAGATCTaGTGTGTGACTGCTCACAAAGGCAGTCCTCAGAAC +
Preference number: 6 (lower is better)
Translates to: CRSSCHPSSYKI*CVTAHKGSPQN
Trigger: GTTCTGAGGACTGCCTTTGTGAGCAGTCACACACAAGATCTTGTAACTCGAAGGATGGCAGCTGCTCCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030897.15
ENSMUST00000152159.8