RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MEGF11 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000036466

Ensembl transcript IDs: ENSMUST00000068967.11, ENSMUST00000093829.9, ENSMUST00000118485.8, ENSMUST00000124881.2, ENSMUST00000164113.8

Found 569 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGCAAGTGACTCAACAAGAGTGGTGCCAACTTCTCTTGACTTGCTaGTCTAGCCATCCCACCTCTTGCTGGGTACTTTGTGCAGAGTGT +
Preference number: 1 (lower is better)
Translates to: GQVTQQEWCQLLLTC*SSHPTSCWVLCAEC
Trigger: ACACTCTGCACAAAGTACCCAGCAAGAGGTGGGATGGCTAGAGCAGCAAGTCAAGAGAAGTTGGCACCACTCTTGTTGAGTCACTTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR GCA 90 bp AGAGGGCAAGTGACTCAACAAGAGTGGTGCCAACTTCTCTTGACTTaGTGCTCTAGCCATCCCACCTCTTGCTGGGTACTTTGTGCAGAG +
Preference number: 1 (lower is better)
Translates to: RGQVTQQEWCQLLLT*CSSHPTSCWVLCAE
Trigger: CTCTGCACAAAGTACCCAGCAAGAGGTGGGATGGCTAGAGCAGCAAGTCAAGAGAAGTTGGCACCACTCTTGTTGAGTCACTTGCCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR GCA 90 bp TGGTGCCAACTTCTCTTGACTTGCTGCTCTAGCCATCCCACCTCTTaGTGGGTACTTTGTGCAGAGTGTAGTTGGCAAGAGAGAAGTGAG +
Preference number: 1 (lower is better)
Translates to: WCQLLLTCCSSHPTS*WVLCAECSWQERSE
Trigger: CTCACTTCTCTCTTGCCAACTACACTCTGCACAAAGTACCCAGCAAGAGGTGGGATGGCTAGAGCAGCAAGTCAAGAGAAGTTGGCACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR GCA 90 bp CAGCATTTAAACCTAGGGCCTAATCCAGGGGCTGGACTTGGTGCTTaGTTTTTGGCTTCACCTGTAGACTTCCTAGAGGAATGGTCCACC +
Preference number: 1 (lower is better)
Translates to: QHLNLGPNPGAGLGA*FLASPVDFLEEWST
Trigger: GGTGGACCATTCCTCTAGGAAGTCTACAGGTGAAGCCAAAAAGCAAGCACCAAGTCCAGCCCCTGGATTAGGCCCTAGGTTTAAATGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
3UTR GCA 90 bp CACTGGGTATCATTTGCATTTCTTGTGCCCCAGAAAGGCAGCAGGTaGAGGGTAGTTTTCCTTGTCAGTACAATGACAGAAGGCCTCTGG +
Preference number: 1 (lower is better)
Translates to: HWVSFAFLVPQKGSR*RVVFLVSTMTEGLW
Trigger: CCAGAGGCCTTCTGTCATTGTACTGACAAGGAAAACTACCCTGCACCTGCTGCCTTTCTGGGGCACAAGAAATGCAAATGATACCCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
3UTR CCA 90 bp TGCCAACTTCTCTTGACTTGCTGCTCTAGCCATCCCACCTCTTGCTaGGTACTTTGTGCAGAGTGTAGTTGGCAAGAGAGAAGTGAGGTT +
Preference number: 1 (lower is better)
Translates to: CQLLLTCCSSHPTSC*VLCAECSWQERSEV
Trigger: AACCTCACTTCTCTCTTGCCAACTACACTCTGCACAAAGTACCCAGCAAGAGGTGGGATGGCTAGAGCAGCAAGTCAAGAGAAGTTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR TCA 90 bp AGTTATTGTACATGCAGGGTAGGGGAAGAAGATAAAGCCTGGGATTaGGACGCCATTTCTGCTTGCTGGTTGGACTTCGCCATGCTTCTT +
Preference number: 1 (lower is better)
Translates to: SYCTCRVGEEDKAWD*DAISACWLDFAMLL
Trigger: AAGAAGCATGGCGAAGTCCAACCAGCAAGCAGAAATGGCGTCTCAATCCCAGGCTTTATCTTCTTCCCCTACCCTGCATGTACAATAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR GCA 90 bp GGAAGGGCAACCCTGAGACAAAGTTTCTCCTCAGGTTCCTTCAAATaGAACCAAACAGAAGGATGTGGTATGGAGATAGAGTGTGTGGAG +
Preference number: 1 (lower is better)
Translates to: GRATLRQSFSSGSFK*NQTEGCGMEIECVE
Trigger: CTCCACACACTCTATCTCCATACCACATCCTTCTGTTTGGTTGCATTTGAAGGAACCTGAGGAGAAACTTTGTCTCAGGGTTGCCCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
3UTR TCA 90 bp AGCATCTTAGTTCTCTGGTGCACACAGAATGACTCAAGTATTGGGTaGACCAATGCAATGCAGCCAGGCCAGGATTGGCATTCGTTATTC +
Preference number: 1 (lower is better)
Translates to: SILVLWCTQNDSSIG*TNAMQPGQDWHSLF
Trigger: GAATAACGAATGCCAATCCTGGCCTGGCTGCATTGCATTGGTTCACCCAATACTTGAGTCATTCTGTGTGCACCAGAGAACTAAGATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR GCA 90 bp GAGTGTAGTTGGCAAGAGAGAAGTGAGGTTTGGAATTTGCATGATTaGAGTTTGCCAGGTAGCAGTTATTGTACATGCAGGGTAGGGGAA +
Preference number: 1 (lower is better)
Translates to: ECSWQERSEVWNLHD*SLPGSSYCTCRVGE
Trigger: TTCCCCTACCCTGCATGTACAATAACTGCTACCTGGCAAACTGCAATCATGCAAATTCCAAACCTCACTTCTCTCTTGCCAACTACACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR TCA 90 bp TCTGGATATAGCTGGAGTTATGACCTCGGCCTTCTTGGACCACACTaGCTGTGGGCTCTAAGGAATATAGTGAAAAATGAGTTCAGAGAA +
Preference number: 1 (lower is better)
Translates to: SGYSWSYDLGLLGPH*LWALRNIVKNEFRE
Trigger: TTCTCTGAACTCATTTTTCACTATATTCCTTAGAGCCCACAGTCAGTGTGGTCCAAGAAGGCCGAGGTCATAACTCCAGCTATATCCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
3UTR GCA 90 bp TTTGTGCAGAGTGTAGTTGGCAAGAGAGAAGTGAGGTTTGGAATTTaGATGATTGCAGTTTGCCAGGTAGCAGTTATTGTACATGCAGGG +
Preference number: 1 (lower is better)
Translates to: FVQSVVGKREVRFGI*MIAVCQVAVIVHAG
Trigger: CCCTGCATGTACAATAACTGCTACCTGGCAAACTGCAATCATGCAAATTCCAAACCTCACTTCTCTCTTGCCAACTACACTCTGCACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR CCA 90 bp CTACTTTTATCAGTTGTGATTTGTAAGCAAGGTGGCACAAGATTCTaGTTTCCTGCATTAGAGGGAAGGGCAACCCTGAGACAAAGTTTC +
Preference number: 1 (lower is better)
Translates to: LLLSVVICKQGGTRF*FPALEGRATLRQSF
Trigger: GAAACTTTGTCTCAGGGTTGCCCTTCCCTCTAATGCAGGAAACCAGAATCTTGTGCCACCTTGCTTACAAATCACAACTGATAAAAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
3UTR CCA 90 bp TGGGTACTTTGTGCAGAGTGTAGTTGGCAAGAGAGAAGTGAGGTTTaGAATTTGCATGATTGCAGTTTGCCAGGTAGCAGTTATTGTACA +
Preference number: 1 (lower is better)
Translates to: WVLCAECSWQERSEV*NLHDCSLPGSSYCT
Trigger: TGTACAATAACTGCTACCTGGCAAACTGCAATCATGCAAATTCCAAACCTCACTTCTCTCTTGCCAACTACACTCTGCACAAAGTACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR CCA 90 bp ATGCACACATGCAGCATTCATGTATGTGTTCCTCTAATGTCATACTaGCTTATGCCTGGAGTGAAACGAGCAGAGATTTGCTTACATATT +
Preference number: 1 (lower is better)
Translates to: MHTCSIHVCVPLMSY*LMPGVKRAEICLHI
Trigger: AATATGTAAGCAAATCTCTGCTCGTTTCACTCCAGGCATAAGCCAGTATGACATTAGAGGAACACATACATGAATGCTGCATGTGTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR CCA 90 bp TTTCCGCTTTGGATTTGTATTAACAGTAGTCGAAGTGTTGTATACTaGCTCTCCACCCTCACAGTTTCTACTTTTATCAGTTGTGATTTG +
Preference number: 1 (lower is better)
Translates to: FPLWICINSSRSVVY*LSTLTVSTFISCDL
Trigger: CAAATCACAACTGATAAAAGTAGAAACTGTGAGGGTGGAGAGCCAGTATACAACACTTCGACTACTGTTAATACAAATCCAAAGCGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
3UTR TCA 90 bp TTTCCTTGTCAGTACAATGACAGAAGGCCTCTGGGGCAGGCAGATTaGTTTTATTTCAGATTTATAATCAGTTTAACTCATACTAATTGG +
Preference number: 1 (lower is better)
Translates to: FPCQYNDRRPLGQAD*FYFRFIISLTHTNW
Trigger: CCAATTAGTATGAGTTAAACTGATTATAAATCTGAAATAAAATCAATCTGCCTGCCCCAGAGGCCTTCTGTCATTGTACTGACAAGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
3UTR CAA 90 bp GCCCGAAGAGGGCAAGTGACTCAACAAGAGTGGTGCCAACTTCTCTaGACTTGCTGCTCTAGCCATCCCACCTCTTGCTGGGTACTTTGT +
Preference number: 2 (lower is better)
Translates to: ARRGQVTQQEWCQLL*TCCSSHPTSCWVLC
Trigger: ACAAAGTACCCAGCAAGAGGTGGGATGGCTAGAGCAGCAAGTCAAGAGAAGTTGGCACCACTCTTGTTGAGTCACTTGCCCTCTTCGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR-3UTR GCA 90 bp GCCCGAAGAGGGCAAGTGACTCAACAAGAGTGGTGCCAACTTCTCTTGACTTGCAATGGAATACATATTTaGCCACTTCAGGCGGTGGGC +
Preference number: 2 (lower is better)
Translates to: ARRGQVTQQEWCQLLLTCNGIHI*PLQAVG
Trigger: GCCCACCGCCTGAAGTGGGCAAATATGTATTCCATT...GCAAGTCAAGAGAAGTTGGCACCACTCTTGTTGAGTCACTTGCCCTCTTCGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR CAA 90 bp TTAAACCTAGGGCCTAATCCAGGGGCTGGACTTGGTGCTTGCTTTTaGGCTTCACCTGTAGACTTCCTAGAGGAATGGTCCACCTTGTAT +
Preference number: 2 (lower is better)
Translates to: LNLGPNPGAGLGACF*ASPVDFLEEWSTLY
Trigger: ATACAAGGTGGACCATTCCTCTAGGAAGTCTACAGGTGAAGCCAAAAAGCAAGCACCAAGTCCAGCCCCTGGATTAGGCCCTAGGTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
3UTR-3UTR TCA 90 bp GCTGGGTACTTTGTGCAGAGTGTAGTTGGCAAGAGAGAAGTGAGGTTTGGAATTAGGGAAGGGCAACCCTaGGACAAAGTTTCTCCTCAG +
Preference number: 2 (lower is better)
Translates to: AGYFVQSVVGKREVRFGIREGQP*DKVSPQ
Trigger: CTGAGGAGAAACTTTGTCTCAGGGTTGCCCTTCCCT...AATTCCAAACCTCACTTCTCTCTTGCCAACTACACTCTGCACAAAGTACCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
3UTR-3UTR CCA 90 bp CTTTTTGGCTTCACCTGTAGACTTCCTAGAGGAATGGTCCACCTTGTATGTAGTCGTAGACATCTGTCTTaGCTTCCCTGCTCTTGGGCG +
Preference number: 2 (lower is better)
Translates to: LFGFTCRLPRGMVHLVCSRRHLS*LPCSWA
Trigger: CGCCCAAGAGCAGGGAAGCCAAGACAGATGTCTACG...ACTACATACAAGGTGGACCATTCCTCTAGGAAGTCTACAGGTGAAGCCAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
3UTR-3UTR TCA 90 bp GCAGATCTTTCCAAATTGACTATAGAATGCACAGCGCACATGTTGAGGCTGACCCTTCTTGGACCACACTaGCTGTGGGCTCTAAGGAAT +
Preference number: 2 (lower is better)
Translates to: ADLSKLTIECTAHMLRLTLLGPH*LWALRN
Trigger: ATTCCTTAGAGCCCACAGTCAGTGTGGTCCAAGAAG...GGTCAGCCTCAACATGTGCGCTGTGCATTCTATAGTCAATTTGGAAAGATCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
3UTR-3UTR GCA 90 bp GAGTGCTACACTTGGAGAGTTGTTAGAGCTCTGCTCCCACTCTGTGTCTCTCTTATTAGGATGGAGGCTTaGTTAAGAGAGGGAAAAACC +
Preference number: 2 (lower is better)
Translates to: ECYTWRVVRALLPLCVSLIRMEA*LREGKT
Trigger: GGTTTTTCCCTCTCTTAAGCAAGCCTCCATCCTAAT...AAGAGAGACACAGAGTGGGAGCAGAGCTCTAACAACTCTCCAAGTGTAGCACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
3UTR-3UTR TCA 90 bp CAGAAAGGCAGCAGGTGCAGGGTAGTTTTCCTTGTCAGTACAATGACAGAAGGCGATGATCTACATTTCTaGAGACATTTAGCTGGCATC +
Preference number: 2 (lower is better)
Translates to: QKGSRCRVVFLVSTMTEGDDLHF*RHLAGI
Trigger: GATGCCAGCTAAATGTCTTCAGAAATGTAGATCATC...GCCTTCTGTCATTGTACTGACAAGGAAAACTACCCTGCACCTGCTGCCTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
3UTR-3UTR GCA 90 bp GCAGATCTTTCCAAATTGACTATAGAATGCACAGCGCACATGTTGAGGCTGACCCCTAAGACAGTGTACTaGCAGAATCCTAGTTTGCTC +
Preference number: 2 (lower is better)
Translates to: ADLSKLTIECTAHMLRLTPKTVY*QNPSLL
Trigger: GAGCAAACTAGGATTCTGGCAGTACACTGTCTTAGG...GGTCAGCCTCAACATGTGCGCTGTGCATTCTATAGTCAATTTGGAAAGATCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
3UTR-3UTR CCA 90 bp CTAAGAGAGACGCTTATCCCTCTTACTGCTTTTCCTGGAAGGGCCCATGGGCAGTTCTATTTAACTTGTTaGGGAGAAAAACTGTGGGTA +
Preference number: 2 (lower is better)
Translates to: LRETLIPLTAFPGRAHGQFYLTC*GEKLWV
Trigger: TACCCACAGTTTTTCTCCCCAACAAGTTAAATAGAA...CTGCCCATGGGCCCTTCCAGGAAAAGCAGTAAGAGGGATAAGCGTCTCTCTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
3UTR CAA 90 bp AGTTGGCAAGAGAGAAGTGAGGTTTGGAATTTGCATGATTGCAGTTaGCCAGGTAGCAGTTATTGTACATGCAGGGTAGGGGAAGAAGAT +
Preference number: 2 (lower is better)
Translates to: SWQERSEVWNLHDCS*PGSSYCTCRVGEED
Trigger: ATCTTCTTCCCCTACCCTGCATGTACAATAACTGCTACCTGGCAAACTGCAATCATGCAAATTCCAAACCTCACTTCTCTCTTGCCAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR CAA 90 bp CTTTGTGCAGAGTGTAGTTGGCAAGAGAGAAGTGAGGTTTGGAATTaGCATGATTGCAGTTTGCCAGGTAGCAGTTATTGTACATGCAGG +
Preference number: 2 (lower is better)
Translates to: LCAECSWQERSEVWN*HDCSLPGSSYCTCR
Trigger: CCTGCATGTACAATAACTGCTACCTGGCAAACTGCAATCATGCAAATTCCAAACCTCACTTCTCTCTTGCCAACTACACTCTGCACAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR-3UTR TCA 90 bp ACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGATTGTCTTCTTGGGCTTGTTTTCACTTaGGATGCTGCACTGTTGCCC +
Preference number: 2 (lower is better)
Translates to: THSSRHSVLIFQVMDCLLGLVFT*DAALLP
Trigger: GGGCAACAGTGCAGCATCTCAAGTGAAAACAAGCCC...AAGAAGACAATCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
3UTR-3UTR CCA 90 bp TTACCTATTGTTACCTGTGCAGTGGAAGTTATGGACTTCTCTGGACAGGAGATTGGTGGCACAAGATTCTaGTTTCCTGCATTAGAGGGA +
Preference number: 2 (lower is better)
Translates to: LPIVTCAVEVMDFSGQEIGGTRF*FPALEG
Trigger: TCCCTCTAATGCAGGAAACCAGAATCTTGTGCCACC...AATCTCCTGTCCAGAGAAGTCCATAACTTCCACTGCACAGGTAACAATAGGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
3UTR-3UTR CCA 90 bp TCTGTTTTGCCTACTATTACTGATAGGGCAGAAGAAAGTGAACCTGTCTTGATTGACATCCTAGAGGTGTaGGTCTTACTGGGGGAGGTT +
Preference number: 2 (lower is better)
Translates to: SVLPTITDRAEESEPVLIDILEV*VLLGEV
Trigger: AACCTCCCCCAGTAAGACCCACACCTCTAGGATGTC...AATCAAGACAGGTTCACTTTCTTCTGCCCTATCAGTAATAGTAGGCAAAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
3UTR-3UTR CCA 90 bp CAGTGGAAGTTATGGACTTCTCTGGACAGGAGATTAAAAGCACCAACTAATGGACAGCCAGGCCAGGATTaGCATTCGTTATTCTTGAAC +
Preference number: 2 (lower is better)
Translates to: QWKLWTSLDRRLKAPTNGQPGQD*HSLFLN
Trigger: GTTCAAGAATAACGAATGCCAATCCTGGCCTGGCTG...TCCATTAGTTGGTGCTTTTAATCTCCTGTCCAGAGAAGTCCATAACTTCCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR-3UTR CCA 90 bp CTTTATTGGACACCCAAGATAACCTTGTTAGATAATAAGACAGGCATGAGTCAATGGCTTCCCTGCTCTTaGGCGCAGAGATCTCTTGAG +
Preference number: 2 (lower is better)
Translates to: LYWTPKITLLDNKTGMSQWLPCS*AQRSLE
Trigger: CTCAAGAGATCTCTGCGCCCAAGAGCAGGGAAGCCA...TTGACTCATGCCTGTCTTATTATCTAACAAGGTTATCTTGGGTGTCCAATAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
3UTR CAA 90 bp CATTCTAGAGTGAGTGAAACTGCTGCTCTTTTCCCCCTTTCTGTTTaGCCTACTATTACTGATAGGGCAGAAGAAAGTGAACCTGTCTTG +
Preference number: 2 (lower is better)
Translates to: HSRVSETAALFPLSV*PTITDRAEESEPVL
Trigger: CAAGACAGGTTCACTTTCTTCTGCCCTATCAGTAATAGTAGGCAAAACAGAAAGGGGGAAAAGAGCAGCAGTTTCACTCACTCTAGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR-3UTR GCA 90 bp GATAGGATTTGCCTTTGTGAACAGACTTTCTTGAACAGTTACCCCAGTCCCGTTGCCAGAATCCTAGTTTaGTCAACAACAAGAGATTCA +
Preference number: 2 (lower is better)
Translates to: DRICLCEQTFLNSYPSPVARILV*STTRDS
Trigger: TGAATCTCTTGTTGTTGAGCAAACTAGGATTCTGGC...AACGGGACTGGGGTAACTGTTCAAGAAAGTCTGTTCACAAAGGCAAATCCTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
3UTR-3UTR GCA 90 bp CTTTATTGGACACCCAAGATAACCTTGTTAGATAATAAGACAGGCATGAGTCAACAGAAAGGCAGCAGGTaGAGGGTAGTTTTCCTTGTC +
Preference number: 2 (lower is better)
Translates to: LYWTPKITLLDNKTGMSQQKGSR*RVVFLV
Trigger: GACAAGGAAAACTACCCTGCACCTGCTGCCTTTCTG...TTGACTCATGCCTGTCTTATTATCTAACAAGGTTATCTTGGGTGTCCAATAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
3UTR-3UTR GCA 90 bp ATCCGACTTTATTGGACACCCAAGATAACCTTGTTAGATAATAAGACAGGCATGGCTGGACTTGGTGCTTaGTTTTTGGCTTCACCTGTA +
Preference number: 2 (lower is better)
Translates to: IRLYWTPKITLLDNKTGMAGLGA*FLASPV
Trigger: TACAGGTGAAGCCAAAAAGCAAGCACCAAGTCCAGC...CATGCCTGTCTTATTATCTAACAAGGTTATCTTGGGTGTCCAATAAAGTCGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
3UTR-3UTR CCA 90 bp CAGTGGAAGTTATGGACTTCTCTGGACAGGAGATTAAAAGCACCAACTAATGGACCAAACAGAAGGATGTaGTATGGAGATAGAGTGTGT +
Preference number: 2 (lower is better)
Translates to: QWKLWTSLDRRLKAPTNGPNRRM*YGDRVC
Trigger: ACACACTCTATCTCCATACCACATCCTTCTGTTTGG...TCCATTAGTTGGTGCTTTTAATCTCCTGTCCAGAGAAGTCCATAACTTCCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
3UTR-3UTR CCA 90 bp TCTGTTTTGCCTACTATTACTGATAGGGCAGAAGAAAGTGAACCTGTCTTGATTCGAAGTGTTGTATACTaGCTCTCCACCCTCACAGTT +
Preference number: 2 (lower is better)
Translates to: SVLPTITDRAEESEPVLIRSVVY*LSTLTV
Trigger: AACTGTGAGGGTGGAGAGCCAGTATACAACACTTCG...AATCAAGACAGGTTCACTTTCTTCTGCCCTATCAGTAATAGTAGGCAAAACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
3UTR-3UTR CCA 90 bp CTTTCTGTTTTGCCTACTATTACTGATAGGGCAGAAGAAAGTGAACCTGTCTTGTACCCCAGTCCCGTTTaGAAGTGTTTCTTTCAATCC +
Preference number: 2 (lower is better)
Translates to: LSVLPTITDRAEESEPVLYPSPV*KCFFQS
Trigger: GGATTGAAAGAAACACTTCCAAACGGGACTGGGGTA...CAAGACAGGTTCACTTTCTTCTGCCCTATCAGTAATAGTAGGCAAAACAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR-3UTR CCA 90 bp CAGTGGAAGTTATGGACTTCTCTGGACAGGAGATTAAAAGCACCAACTAATGGAAGCATCTTAGTTCTCTaGTGCACACAGAATGACTCA +
Preference number: 2 (lower is better)
Translates to: QWKLWTSLDRRLKAPTNGSILVL*CTQNDS
Trigger: TGAGTCATTCTGTGTGCACCAGAGAACTAAGATGCT...TCCATTAGTTGGTGCTTTTAATCTCCTGTCCAGAGAAGTCCATAACTTCCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR CAA 90 bp CTTAGGTCTACCAATATTTCCTACTGTTTCTATTTTATAAGGCTTTaGGGAGCGTTCACTATTGCTGATGGCTCGCTTCCATGCACACAT +
Preference number: 2 (lower is better)
Translates to: LRSTNISYCFYFIRL*GAFTIADGSLPCTH
Trigger: ATGTGTGCATGGAAGCGAGCCATCAGCAATAGTGAACGCTCCCAAAAGCCTTATAAAATAGAAACAGTAGGAAATATTGGTAGACCTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR-3UTR GCA 90 bp CTTTATTGGACACCCAAGATAACCTTGTTAGATAATAAGACAGGCATGAGTCAACATTTGCATTTCTTGTaGCCCAGAAAGGCAGCAGGT +
Preference number: 2 (lower is better)
Translates to: LYWTPKITLLDNKTGMSQHLHFL*PRKAAG
Trigger: ACCTGCTGCCTTTCTGGGGCACAAGAAATGCAAATG...TTGACTCATGCCTGTCTTATTATCTAACAAGGTTATCTTGGGTGTCCAATAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
3UTR-3UTR CCA 90 bp CTTTATTGGACACCCAAGATAACCTTGTTAGATAATAAGACAGGCATGAGTCAAATGACAGAAGGCCTCTaGGGCAGGCAGATTGATTTT +
Preference number: 2 (lower is better)
Translates to: LYWTPKITLLDNKTGMSQMTEGL*GRQIDF
Trigger: AAAATCAATCTGCCTGCCCCAGAGGCCTTCTGTCAT...TTGACTCATGCCTGTCTTATTATCTAACAAGGTTATCTTGGGTGTCCAATAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
3UTR-3UTR GCA 90 bp AACGGCCATTCTGATTGTTTTCGTTTTCCGCTTTGGATTTGTATTAACAGTAGTTGTTTTCACTTGAGATaGTGCACTGTTGCCCTGGTT +
Preference number: 2 (lower is better)
Translates to: NGHSDCFRFPLWICINSSCFHLR*CTVALV
Trigger: AACCAGGGCAACAGTGCAGCATCTCAAGTGAAAACA...ACTACTGTTAATACAAATCCAAAGCGGAAAACGAAAACAATCAGAATGGCCGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
3UTR CAA 90 bp TTAACTTCCAACTTGTCCCTTCTGTTCTTAATTCTTGTGAAGAATTaGGGGATTAACCATTCAGAGTTGTCCAAGCCTCCGTTTACCTAT +
Preference number: 2 (lower is better)
Translates to: LTSNLSLLFLILVKN*GINHSELSKPPFTY
Trigger: ATAGGTAAACGGAGGCTTGGACAACTCTGAATGGTTAATCCCCAAATTCTTCACAAGAATTAAGAACAGAAGGGACAAGTTGGAAGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR-3UTR TCA 90 bp CTATTGTTACCTGTGCAGTGGAAGTTATGGACTTCTCTGGACAGGAGATTAAAATACTTTTATCAGTTGTaGTTTGTAAGCAAGGTGGCA +
Preference number: 2 (lower is better)
Translates to: LLLPVQWKLWTSLDRRLKYFYQL*FVSKVA
Trigger: TGCCACCTTGCTTACAAATCACAACTGATAAAAGTA...TTTTAATCTCCTGTCCAGAGAAGTCCATAACTTCCACTGCACAGGTAACAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
3UTR-3UTR GCA 90 bp CTTTATTGGACACCCAAGATAACCTTGTTAGATAATAAGACAGGCATGAGTCAAACACTGGGTATCATTTaGATTTCTTGTGCCCCAGAA +
Preference number: 2 (lower is better)
Translates to: LYWTPKITLLDNKTGMSQTLGII*ISCAPE
Trigger: TTCTGGGGCACAAGAAATGCAAATGATACCCAGTGT...TTGACTCATGCCTGTCTTATTATCTAACAAGGTTATCTTGGGTGTCCAATAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
3UTR-3UTR TCA 90 bp CTTCCCATCCGACTTTATTGGACACCCAAGATAACCTTGTTAGATAATAAGACACTGGGGCAGGCAGATTaGTTTTATTTCAGATTTATA +
Preference number: 2 (lower is better)
Translates to: LPIRLYWTPKITLLDNKTLGQAD*FYFRFI
Trigger: TATAAATCTGAAATAAAATCAATCTGCCTGCCCCAG...TGTCTTATTATCTAACAAGGTTATCTTGGGTGTCCAATAAAGTCGGATGGGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
3UTR-3UTR GCA 90 bp TGCCCTTTCCCTTCTCTGTATAGCCTGACTGAACTATGTTACTTGAAATGTTGTAACATAAGTGTGCCATaGCCACATTTGTGTAATATT +
Preference number: 2 (lower is better)
Translates to: CPFPSLYSLTELCYLKCCNISVP*PHLCNI
Trigger: AATATTACACAAATGTGGGCATGGCACACTTATGTT...ACAACATTTCAAGTAACATAGTTCAGTCAGGCTATACAGAGAAGGGAAAGGGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR CCA 72 bp CTGTGGCGTAGACATCTGTCTTGGCTTCCCTGCTCTTaGGCGCAGAGATCTCTTGAGGGTGAGGGCCATACA +
Preference number: 3 (lower is better)
Translates to: LWRRHLSWLPCS*AQRSLEGEGHT
Trigger: TGTATGGCCCTCACCCTCAAGAGATCTCTGCGCCCAAGAGCAGGGAAGCCAAGACAGATGTCTACGCCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
3UTR GCA 72 bp GCAGAGCACACTAAGAGAGACGCTTATCCCTCTTACTaGTTTTCCTGGAAGGGCCCATGGGCAGGGCTCTGT +
Preference number: 3 (lower is better)
Translates to: AEHTKRDAYPSY*FSWKGPWAGLC
Trigger: ACAGAGCCCTGCCCATGGGCCCTTCCAGGAAAAGCAGTAAGAGGGATAAGCGTCTCTCTTAGTGTGCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
3UTR CCA 72 bp TTCCTGGAAGGGCCCATGGGCAGGGCTCTGTCTTACTaGGAGGAGGTCATAGTGACCAGGAATATGGCTGTT +
Preference number: 3 (lower is better)
Translates to: FLEGPMGRALSY*EEVIVTRNMAV
Trigger: AACAGCCATATTCCTGGTCACTATGACCTCCTCCCAGTAAGACAGAGCCCTGCCCATGGGCCCTTCCAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
3UTR TCA 72 bp ACATGCAGGGTAGGGGAAGAAGATAAAGCCTGGGATTaGGACGCCATTTCTGCTTGCTGGTTGGACTTCGCC +
Preference number: 3 (lower is better)
Translates to: TCRVGEEDKAWD*DAISACWLDFA
Trigger: GGCGAAGTCCAACCAGCAAGCAGAAATGGCGTCTCAATCCCAGGCTTTATCTTCTTCCCCTACCCTGCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR-3UTR CAA 90 bp GCCCGAAGAGGGCAAGTGACTCAACAAGAGTGGTGCCAACTTCTCTTGACTTGCTGTGTGGAGGAGGGCTaGTTTTCACTTGAGATGCTG +
Preference number: 3 (lower is better)
Translates to: ARRGQVTQQEWCQLLLTCCVEEG*FSLEML
Trigger: CAGCATCTCAAGTGAAAACAAGCCCTCCTCCACACA...GCAAGTCAAGAGAAGTTGGCACCACTCTTGTTGAGTCACTTGCCCTCTTCGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
3UTR GCA 72 bp CTTCTCTTGACTTGCTGCTCTAGCCATCCCACCTCTTaGTGGGTACTTTGTGCAGAGTGTAGTTGGCAAGAG +
Preference number: 3 (lower is better)
Translates to: LLLTCCSSHPTS*WVLCAECSWQE
Trigger: CTCTTGCCAACTACACTCTGCACAAAGTACCCAGCAAGAGGTGGGATGGCTAGAGCAGCAAGTCAAGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR GCA 72 bp AACCTAGGGCCTAATCCAGGGGCTGGACTTGGTGCTTaGTTTTTGGCTTCACCTGTAGACTTCCTAGAGGAA +
Preference number: 3 (lower is better)
Translates to: NLGPNPGAGLGA*FLASPVDFLEE
Trigger: TTCCTCTAGGAAGTCTACAGGTGAAGCCAAAAAGCAAGCACCAAGTCCAGCCCCTGGATTAGGCCCTAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
3UTR-3UTR CAA 90 bp GCCCGAAGAGGGCAAGTGACTCAACAAGAGTGGTGCCAACTTCTCTTGACTTGCGTTTCCTTTTCCTTCTaGGAAGGCTTGAGGAACCTA +
Preference number: 3 (lower is better)
Translates to: ARRGQVTQQEWCQLLLTCVSFSF*EGLRNL
Trigger: TAGGTTCCTCAAGCCTTCCAAGAAGGAAAAGGAAAC...GCAAGTCAAGAGAAGTTGGCACCACTCTTGTTGAGTCACTTGCCCTCTTCGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR TCA 72 bp GTTCTCTGGTGCACACAGAATGACTCAAGTATTGGGTaGACCAATGCAATGCAGCCAGGCCAGGATTGGCAT +
Preference number: 3 (lower is better)
Translates to: VLWCTQNDSSIG*TNAMQPGQDWH
Trigger: ATGCCAATCCTGGCCTGGCTGCATTGCATTGGTTCACCCAATACTTGAGTCATTCTGTGTGCACCAGAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR CCA 72 bp AAGCCTGGGATTGAGACGCCATTTCTGCTTGCTGGTTaGACTTCGCCATGCTTCTTCATCCTTGCTTCACAA +
Preference number: 3 (lower is better)
Translates to: KPGIETPFLLAG*TSPCFFILASQ
Trigger: TTGTGAAGCAAGGATGAAGAAGCATGGCGAAGTCCAACCAGCAAGCAGAAATGGCGTCTCAATCCCAGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR-3UTR CAA 90 bp TTGGGAGCGTTCACTATTGCTGATGGCTCGCTTCCATGCACACATGCAGCATTCAGAATGACTCAAGTATaGGGTGAACCAATGCAATGC +
Preference number: 3 (lower is better)
Translates to: LGAFTIADGSLPCTHAAFRMTQV*GEPMQC
Trigger: GCATTGCATTGGTTCACCCAATACTTGAGTCATTCT...GAATGCTGCATGTGTGCATGGAAGCGAGCCATCAGCAATAGTGAACGCTCCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR-3UTR CAA 90 bp GCTGGGTACTTTGTGCAGAGTGTAGTTGGCAAGAGAGAAGTGAGGTTTGGAATTGCCTCCGTTTACCTATaGTTACCTGTGCAGTGGAAG +
Preference number: 3 (lower is better)
Translates to: AGYFVQSVVGKREVRFGIASVYL*LPVQWK
Trigger: CTTCCACTGCACAGGTAACAATAGGTAAACGGAGGC...AATTCCAAACCTCACTTCTCTCTTGCCAACTACACTCTGCACAAAGTACCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR-3UTR CAA 90 bp GCCCGAAGAGGGCAAGTGACTCAACAAGAGTGGTGCCAACTTCTCTTGACTTGCATTTCAAGTCATGGATaGTCTTCTTTCAGAGTCAGA +
Preference number: 3 (lower is better)
Translates to: ARRGQVTQQEWCQLLLTCISSHG*SSFRVR
Trigger: TCTGACTCTGAAAGAAGACAATCCATGACTTGAAAT...GCAAGTCAAGAGAAGTTGGCACCACTCTTGTTGAGTCACTTGCCCTCTTCGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR CCA 72 bp TCAGTTGTGATTTGTAAGCAAGGTGGCACAAGATTCTaGTTTCCTGCATTAGAGGGAAGGGCAACCCTGAGA +
Preference number: 3 (lower is better)
Translates to: SVVICKQGGTRF*FPALEGRATLR
Trigger: TCTCAGGGTTGCCCTTCCCTCTAATGCAGGAAACCAGAATCTTGTGCCACCTTGCTTACAAATCACAACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
3UTR TCA 72 bp CAATGCAGCCAGGCCAGGATTGGCATTCGTTATTCTTaGACTTTGACTTGGCAAAATTTGGTAAGGCTGGCA +
Preference number: 3 (lower is better)
Translates to: QCSQARIGIRYS*TLTWQNLVRLA
Trigger: TGCCAGCCTTACCAAATTTTGCCAAGTCAAAGTTCAAGAATAACGAATGCCAATCCTGGCCTGGCTGCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR-3UTR CAA 90 bp TTAAGAACATGGGATGGCACAAAGGTGACCATTAACTTCCAACTTGTCCCTTCTTGTGAACAGACTTTCTaGAACAGTTACCCCAGTCCC +
Preference number: 3 (lower is better)
Translates to: LRTWDGTKVTINFQLVPSCEQTF*NSYPSP
Trigger: GGGACTGGGGTAACTGTTCAAGAAAGTCTGTTCACA...AGAAGGGACAAGTTGGAAGTTAATGGTCACCTTTGTGCCATCCCATGTTCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR-3UTR CAA 90 bp TGCCCTTTCCCTTCTCTGTATAGCCTGACTGAACTATGTTACTTGAAATGTTGTGCCTCCGTTTACCTATaGTTACCTGTGCAGTGGAAG +
Preference number: 3 (lower is better)
Translates to: CPFPSLYSLTELCYLKCCASVYL*LPVQWK
Trigger: CTTCCACTGCACAGGTAACAATAGGTAAACGGAGGC...ACAACATTTCAAGTAACATAGTTCAGTCAGGCTATACAGAGAAGGGAAAGGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR TCA 72 bp CTATTTTATAAGGCTTTTGGGAGCGTTCACTATTGCTaGTGGCTCGCTTCCATGCACACATGCAGCATTCAT +
Preference number: 3 (lower is better)
Translates to: LFYKAFGSVHYC*WLASMHTCSIH
Trigger: ATGAATGCTGCATGTGTGCATGGAAGCGAGCCATCAGCAATAGTGAACGCTCCCAAAAGCCTTATAAAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR GCA 72 bp TGGCAAGAGAGAAGTGAGGTTTGGAATTTGCATGATTaGAGTTTGCCAGGTAGCAGTTATTGTACATGCAGG +
Preference number: 3 (lower is better)
Translates to: WQERSEVWNLHD*SLPGSSYCTCR
Trigger: CCTGCATGTACAATAACTGCTACCTGGCAAACTGCAATCATGCAAATTCCAAACCTCACTTCTCTCTTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR CCA 72 bp GTCCAAGCCTCCGTTTACCTATTGTTACCTGTGCAGTaGAAGTTATGGACTTCTCTGGACAGGAGATTAAAA +
Preference number: 3 (lower is better)
Translates to: VQASVYLLLPVQ*KLWTSLDRRLK
Trigger: TTTTAATCTCCTGTCCAGAGAAGTCCATAACTTCCACTGCACAGGTAACAATAGGTAAACGGAGGCTTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR TCA 72 bp GCTCTCCACCCTCACAGTTTCTACTTTTATCAGTTGTaGTTTGTAAGCAAGGTGGCACAAGATTCTGGTTTC +
Preference number: 3 (lower is better)
Translates to: ALHPHSFYFYQL*FVSKVAQDSGF
Trigger: GAAACCAGAATCTTGTGCCACCTTGCTTACAAATCACAACTGATAAAAGTAGAAACTGTGAGGGTGGAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
3UTR TCA 72 bp AGGTTGATAGGATTTGCCTTTGTGAACAGACTTTCTTaGACAGTTACCCCAGTCCCGTTTGGAAGTGTTTCT +
Preference number: 3 (lower is better)
Translates to: RLIGFAFVNRLS*TVTPVPFGSVS
Trigger: AGAAACACTTCCAAACGGGACTGGGGTAACTGTTCAAGAAAGTCTGTTCACAAAGGCAAATCCTATCAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
3UTR TCA 72 bp CACAAAGATAACAGAGCACTTGTGGCCCTGAAACACTaGGGTGAGTCTCTTCACTACGTTTCTTTATACATG +
Preference number: 3 (lower is better)
Translates to: HKDNRALVALKH*GESLHYVSLYM
Trigger: CATGTATAAAGAAACGTAGTGAAGAGACTCACCTCAGTGTTTCAGGGCCACAAGTGCTCTGTTATCTTTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR CCA 72 bp TCCGTTTACCTATTGTTACCTGTGCAGTGGAAGTTATaGACTTCTCTGGACAGGAGATTAAAAGCACCAACT +
Preference number: 3 (lower is better)
Translates to: SVYLLLPVQWKL*TSLDRRLKAPT
Trigger: AGTTGGTGCTTTTAATCTCCTGTCCAGAGAAGTCCATAACTTCCACTGCACAGGTAACAATAGGTAAACGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR-3UTR CAA 90 bp ATACCAATTCCCTTAGATACTGAAACAGATGTTGAGGATAACAACAATCAACAGAGGGCTTGTTTTCACTaGAGATGCTGCACTGTTGCC +
Preference number: 3 (lower is better)
Translates to: IPIPLDTETDVEDNNNQQRACFH*RCCTVA
Trigger: GGCAACAGTGCAGCATCTCAAGTGAAAACAAGCCCT...CTGTTGATTGTTGTTATCCTCAACATCTGTTTCAGTATCTAAGGGAATTGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
3UTR-3UTR CAA 90 bp TACTGTTTCTATTTTATAAGGCTTTTGGGAGCGTTCACTATTGCTGATGGCTCGAGAATGACTCAAGTATaGGGTGAACCAATGCAATGC +
Preference number: 3 (lower is better)
Translates to: YCFYFIRLLGAFTIADGSRMTQV*GEPMQC
Trigger: GCATTGCATTGGTTCACCCAATACTTGAGTCATTCT...CGAGCCATCAGCAATAGTGAACGCTCCCAAAAGCCTTATAAAATAGAAACAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR-3UTR CAA 90 bp TGGACACCCAAGATAACCTTGTTAGATAATAAGACAGGCATGAGTCAACAGGCATCTGGGGCAGGCAGATaGATTTTATTTCAGATTTAT +
Preference number: 3 (lower is better)
Translates to: WTPKITLLDNKTGMSQQASGAGR*ILFQIY
Trigger: ATAAATCTGAAATAAAATCAATCTGCCTGCCCCAGA...TGCCTGTTGACTCATGCCTGTCTTATTATCTAACAAGGTTATCTTGGGTGTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
3UTR-3UTR CAA 90 bp CTTTATTGGACACCCAAGATAACCTTGTTAGATAATAAGACAGGCATGAGTCAATATCATTTGCATTTCTaGTGCCCCAGAAAGGCAGCA +
Preference number: 3 (lower is better)
Translates to: LYWTPKITLLDNKTGMSQYHLHF*CPRKAA
Trigger: TGCTGCCTTTCTGGGGCACAAGAAATGCAAATGATA...TTGACTCATGCCTGTCTTATTATCTAACAAGGTTATCTTGGGTGTCCAATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
3UTR-3UTR CAA 90 bp ATTCCCTTAGATACTGAAACAGATGTTGAGGATAACAACAATCAACAGCACATAATTAGCATTGTTGCCTaGGTGGGAGGGAAGAAAGTT +
Preference number: 3 (lower is better)
Translates to: IPLDTETDVEDNNNQQHIISIVA*VGGKKV
Trigger: AACTTTCTTCCCTCCCACCAAGGCAACAATGCTAAT...TATGTGCTGTTGATTGTTGTTATCCTCAACATCTGTTTCAGTATCTAAGGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
3UTR CCA 72 bp TGGATTTGTATTAACAGTAGTCGAAGTGTTGTATACTaGCTCTCCACCCTCACAGTTTCTACTTTTATCAGT +
Preference number: 3 (lower is better)
Translates to: WICINSSRSVVY*LSTLTVSTFIS
Trigger: ACTGATAAAAGTAGAAACTGTGAGGGTGGAGAGCCAGTATACAACACTTCGACTACTGTTAATACAAATCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
3UTR CCA 72 bp TTTACTCACTCTAGACTCTTAATCCTCTTAAGAACATaGGATGGCACAAAGGTGACCATTAACTTCCAACTT +
Preference number: 3 (lower is better)
Translates to: FTHSRLLILLRT*DGTKVTINFQL
Trigger: AAGTTGGAAGTTAATGGTCACCTTTGTGCCATCCCATGTTCTTAAGAGGATTAAGAGTCTAGAGTGAGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR CCA 72 bp GTAAACGGCCATTCTGATTGTTTTCGTTTTCCGCTTTaGATTTGTATTAACAGTAGTCGAAGTGTTGTATAC +
Preference number: 3 (lower is better)
Translates to: VNGHSDCFRFPL*ICINSSRSVVY
Trigger: GTATACAACACTTCGACTACTGTTAATACAAATCCAAAGCGGAAAACGAAAACAATCAGAATGGCCGTTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
3UTR TCA 72 bp GATTGTGGCTGTTATAATTTGCTGGGGCATACCAAATaGACAGAGACCAAGATTAATATTAGAACAGTTCAT +
Preference number: 3 (lower is better)
Translates to: DCGCYNLLGHTK*TETKINIRTVH
Trigger: ATGAACTGTTCTAATATTAATCTTGGTCTCTGTTCATTTGGTATGCCCCAGCAAATTATAACAGCCACAATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp TCCTGTGGCGTAGACATCTGTCTTGGCTTCCCTGCTCTTGGGCGCAGAGATCTCTGGCAGCCCTTGCCGTaGGTACCAGGAGCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: SCGVDICLGFPALGRRDLWQPLP*VPGAQS
Trigger: ACTCTGCGCTCCTGGTACTCACGGCAAGGGCTGCCA...GAGATCTCTGCGCCCAAGAGCAGGGAAGCCAAGACAGATGTCTACGCCACAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR GCA 90 bp ACAGAGTTCCAGAGCTCCCTGCCTAGCTCACGTGTCCCAGCATTTAAACCTAGGAGAGGCACTCGCCAGTaGGCGGGTCACAGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: TEFQSSLPSSRVPAFKPRRGTRQ*AGHSWR
Trigger: GCGCCAGCTGTGACCCGCGCACTGGCGAGTGCCTCT...CCTAGGTTTAAATGCTGGGACACGTGAGCTAGGCAGGGAGCTCTGGAACTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR GCA 90 bp TCCTGTGGCGTAGACATCTGTCTTGGCTTCCCTGCTCTTGGGCGCAGAGATCTCGGGACCATAGGTCCCTaGAGCACAGGGGACGGCACA +
Preference number: 4 (lower is better)
Translates to: SCGVDICLGFPALGRRDLGTIGP*STGDGT
Trigger: TGTGCCGTCCCCTGTGCTGCAGGGACCTATGGTCCC...GAGATCTCTGCGCCCAAGAGCAGGGAAGCCAAGACAGATGTCTACGCCACAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR GCA 90 bp CTAAGAGAGACGCTTATCCCTCTTACTGCTTTTCCTGGAAGGGCCCATGGGCAGCAGGGCCCCCTGCTGTaGACGCAGAGGGGACAAGGC +
Preference number: 4 (lower is better)
Translates to: LRETLIPLTAFPGRAHGQQGPLL*TQRGQG
Trigger: GCCTTGTCCCCTCTGCGTGCACAGCAGGGGGCCCTG...CTGCCCATGGGCCCTTCCAGGAAAAGCAGTAAGAGGGATAAGCGTCTCTCTTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
CDS-3UTR GCA 90 bp GCCCGAAGAGGGCAAGTGACTCAACAAGAGTGGTGCCAACTTCTCTTGACTTGCCAGGGCCCCCTGCTGTaGACGCAGAGGGGACAAGGC +
Preference number: 4 (lower is better)
Translates to: ARRGQVTQQEWCQLLLTCQGPLL*TQRGQG
Trigger: GCCTTGTCCCCTCTGCGTGCACAGCAGGGGGCCCTG...GCAAGTCAAGAGAAGTTGGCACCACTCTTGTTGAGTCACTTGCCCTCTTCGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp TCCCAGCATTTAAACCTAGGGCCTAATCCAGGGGCTGGACTTGGTGCTTGCTTTGGTGGCAGGGCCCCCTaGTGTGCACGCAGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: SQHLNLGPNPGAGLGACFGGRAP*CARRGD
Trigger: GTCCCCTCTGCGTGCACAGCAGGGGGCCCTGCCACC...AAAGCAAGCACCAAGTCCAGCCCCTGGATTAGGCCCTAGGTTTAAATGCTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR GCA 90 bp TTGGGAGCGTTCACTATTGCTGATGGCTCGCTTCCATGCACACATGCAGCATTCAGAGGCACTCGCCAGTaGGCGGGTCACAGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: LGAFTIADGSLPCTHAAFRGTRQ*AGHSWR
Trigger: GCGCCAGCTGTGACCCGCGCACTGGCGAGTGCCTCT...GAATGCTGCATGTGTGCATGGAAGCGAGCCATCAGCAATAGTGAACGCTCCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp CTAGGGCCTAATCCAGGGGCTGGACTTGGTGCTTGCTTTTTGGCTTCACCTGTATGCTCCCGTCCAGCCTaGAGGGCAGGCACATTCGCC +
Preference number: 4 (lower is better)
Translates to: LGPNPGAGLGACFLASPVCSRPA*RAGTFA
Trigger: GGCGAATGTGCCTGCCCTCCAGGCTGGACGGGAGCA...TACAGGTGAAGCCAAAAAGCAAGCACCAAGTCCAGCCCCTGGATTAGGCCCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CCA 90 bp CAGAAAGGCAGCAGGTGCAGGGTAGTTTTCCTTGTCAGTACAATGACAGAAGGCGTCCCCCAGCCAGCCTaGGGTGCAGGCACAGGACCC +
Preference number: 4 (lower is better)
Translates to: QKGSRCRVVFLVSTMTEGVPQPA*GAGTGP
Trigger: GGGTCCTGTGCCTGCACCCCAGGCTGGCTGGGGGAC...GCCTTCTGTCATTGTACTGACAAGGAAAACTACCCTGCACCTGCTGCCTTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR TCA 90 bp AGCAGGTGCAGGGTAGTTTTCCTTGTCAGTACAATGACAGAAGGCCTCTGGGGCACAGCTGCAGGACACTaGACAGTTGGGGCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: SRCRVVFLVSTMTEGLWGTAAGH*TVGAPA
Trigger: CGCTGGGGCCCCAACTGTTCAGTGTCCTGCAGCTGT...GCCCCAGAGGCCTTCTGTCATTGTACTGACAAGGAAAACTACCCTGCACCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR GCA 90 bp CTAGGGCCTAATCCAGGGGCTGGACTTGGTGCTTGCTTTTTGGCTTCACCTGTACCAGCCAGCCTGGGGTaGAGGCACAGGACCCATCAA +
Preference number: 4 (lower is better)
Translates to: LGPNPGAGLGACFLASPVPASLG*RHRTHQ
Trigger: TTGATGGGTCCTGTGCCTGCACCCCAGGCTGGCTGG...TACAGGTGAAGCCAAAAAGCAAGCACCAAGTCCAGCCCCTGGATTAGGCCCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR GCA 90 bp AGACATCTGTCTTGGCTTCCCTGCTCTTGGGCGCAGAGATCTCTTGAGGGTGAGACAGCACCCACTGAGTaGCGCTCTGCTCCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: RHLSWLPCSWAQRSLEGETAPTE*RSAPRA
Trigger: AGCTCTGGGAGCAGAGCGGCACTCAGTGGGTGCTGT...CTCACCCTCAAGAGATCTCTGCGCCCAAGAGCAGGGAAGCCAAGACAGATGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR GCA 90 bp TCCTGTGGCGTAGACATCTGTCTTGGCTTCCCTGCTCTTGGGCGCAGAGATCTCGTAGGGGGTCCAGCCTaGTGTGTCTCTGTCAAGGGA +
Preference number: 4 (lower is better)
Translates to: SCGVDICLGFPALGRRDLVGGPA*CVSVKG
Trigger: TCCCTTGACAGAGACACAGCAGGCTGGACCCCCTAC...GAGATCTCTGCGCCCAAGAGCAGGGAAGCCAAGACAGATGTCTACGCCACAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR TCA 90 bp AGCAGGTGCAGGGTAGTTTTCCTTGTCAGTACAATGACAGAAGGCCTCTGGGGCTCCACAAGTGCCTGGTaGGTGTGGCTCAGCATGGCG +
Preference number: 4 (lower is better)
Translates to: SRCRVVFLVSTMTEGLWGSTSAW*VWLSMA
Trigger: CGCCATGCTGAGCCACACTCACCAGGCACTTGTGGA...GCCCCAGAGGCCTTCTGTCATTGTACTGACAAGGAAAACTACCCTGCACCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR GCA 90 bp CTAAGAGAGACGCTTATCCCTCTTACTGCTTTTCCTGGAAGGGCCCATGGGCAGCACAGCGGCCGTGCATaGACTCCTCGGTACACAGAG +
Preference number: 4 (lower is better)
Translates to: LRETLIPLTAFPGRAHGQHSGRA*TPRYTE
Trigger: CTCTGTGTACCGAGGAGTGCATGCACGGCCGCTGTG...CTGCCCATGGGCCCTTCCAGGAAAAGCAGTAAGAGGGATAAGCGTCTCTCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
CDS-3UTR CCA 90 bp ACAGAGTTCCAGAGCTCCCTGCCTAGCTCACGTGTCCCAGCATTTAAACCTAGGCACTGGCCTCCATGGTaGCAGGGACAGTCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: TEFQSSLPSSRVPAFKPRHWPPW*QGQSWL
Trigger: TAGCCAGGACTGTCCCTGCCACCATGGAGGCCAGTG...CCTAGGTTTAAATGCTGGGACACGTGAGCTAGGCAGGGAGCTCTGGAACTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CCA 90 bp CTAAGAGAGACGCTTATCCCTCTTACTGCTTTTCCTGGAAGGGCCCATGGGCAGTCACACTGGCCTCCATaGTGGCAGGGACAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LRETLIPLTAFPGRAHGQSHWPP*WQGQSW
Trigger: CCAGGACTGTCCCTGCCACCATGGAGGCCAGTGTGA...CTGCCCATGGGCCCTTCCAGGAAAAGCAGTAAGAGGGATAAGCGTCTCTCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
CDS-3UTR CCA 90 bp CATTTAAACCTAGGGCCTAATCCAGGGGCTGGACTTGGTGCTTGCTTTTTGGCTGGCCCCAGGTCCCACTaGGACAAGGCAGGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: HLNLGPNPGAGLGACFLAGPRSH*DKAGSS
Trigger: ACTGCTCCCTGCCTTGTCCCAGTGGGACCTGGGGCC...AGCCAAAAAGCAAGCACCAAGTCCAGCCCCTGGATTAGGCCCTAGGTTTAAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CCA 90 bp CTAGGGCCTAATCCAGGGGCTGGACTTGGTGCTTGCTTTTTGGCTTCACCTGTAAGGACACTGAACAGTTaGGGCCCCAGCGACCTGGAG +
Preference number: 4 (lower is better)
Translates to: LGPNPGAGLGACFLASPVRTLNS*GPSDLE
Trigger: CTCCAGGTCGCTGGGGCCCCAACTGTTCAGTGTCCT...TACAGGTGAAGCCAAAAAGCAAGCACCAAGTCCAGCCCCTGGATTAGGCCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CCA 90 bp CTAGGGCCTAATCCAGGGGCTGGACTTGGTGCTTGCTTTTTGGCTTCACCTGTACAGATACCACTGATGTaGTGGCAGGGCCCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LGPNPGAGLGACFLASPVQIPLM*WQGPLL
Trigger: CAGCAGGGGGCCCTGCCACCACATCAGTGGTATCTG...TACAGGTGAAGCCAAAAAGCAAGCACCAAGTCCAGCCCCTGGATTAGGCCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR TCA 90 bp TCCCAGCATTTAAACCTAGGGCCTAATCCAGGGGCTGGACTTGGTGCTTGCTTTAGGCACATTCGCCAGTaGTGTGGTGGCAGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: SQHLNLGPNPGAGLGACFRHIRQ*CGGRCL
Trigger: GAGGCACCTGCCACCACATCACTGGCGAATGTGCCT...AAAGCAAGCACCAAGTCCAGCCCCTGGATTAGGCCCTAGGTTTAAATGCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR TCA 90 bp GCCCGAAGAGGGCAAGTGACTCAACAAGAGTGGTGCCAACTTCTCTTGACTTGCAAGTGCAGCTCCCGGTaGTACTGTGGCAGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: ARRGQVTQQEWCQLLLTCKCSSR*YCGSQH
Trigger: GTGCTGACTGCCACAGTATCACCGGGAGCTGCACTT...GCAAGTCAAGAGAAGTTGGCACCACTCTTGTTGAGTCACTTGCCCTCTTCGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp CTAAGAGAGACGCTTATCCCTCTTACTGCTTTTCCTGGAAGGGCCCATGGGCAGCACACACCTCTCCCATaGAGCCTGGAGCACAAGTGC +
Preference number: 4 (lower is better)
Translates to: LRETLIPLTAFPGRAHGQHTPLP*SLEHKC
Trigger: GCACTTGTGCTCCAGGCTTCATGGGAGAGGTGTGTG...CTGCCCATGGGCCCTTCCAGGAAAAGCAGTAAGAGGGATAAGCGTCTCTCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
CDS-3UTR GCA 90 bp CTAGGGCCTAATCCAGGGGCTGGACTTGGTGCTTGCTTTTTGGCTTCACCTGTAACCCATCAAAGGGGCTaGAGGCAGCTCCATTGGCAC +
Preference number: 4 (lower is better)
Translates to: LGPNPGAGLGACFLASPVTHQRG*RQLHWH
Trigger: GTGCCAATGGAGCTGCCTGCAGCCCCTTTGATGGGT...TACAGGTGAAGCCAAAAAGCAAGCACCAAGTCCAGCCCCTGGATTAGGCCCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR GCA 90 bp GACTTTCTTGAACAGTTACCCCAGTCCCGTTTGGAAGTGTTTCTTTCAATCCAGGGTGGCAGGGCCCCCTaGTGTGCACGCAGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: DFLEQLPQSRLEVFLSIQGGRAP*CARRGD
Trigger: GTCCCCTCTGCGTGCACAGCAGGGGGCCCTGCCACC...CTGGATTGAAAGAAACACTTCCAAACGGGACTGGGGTAACTGTTCAAGAAAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp GACTTTCTTGAACAGTTACCCCAGTCCCGTTTGGAAGTGTTTCTTTCAATCCAGCCCCATCCTCGGCGCTaGAGCTCGCCCCGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: DFLEQLPQSRLEVFLSIQPHPRR*SSPRCG
Trigger: GCCACAACGGGGCGAGCTGCAGCGCCGAGGATGGGG...CTGGATTGAAAGAAACACTTCCAAACGGGACTGGGGTAACTGTTCAAGAAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
CDS-3UTR GCA 90 bp CATTTAAACCTAGGGCCTAATCCAGGGGCTGGACTTGGTGCTTGCTTTTTGGCTCGGCCTTTCTCTTTCTaGCGCCTCCGTCGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: HLNLGPNPGAGLGACFLARPFSF*RLRRQA
Trigger: TGCCTGGCGACGGAGGCGGCAGAAAGAGAAAGGCCG...AGCCAAAAAGCAAGCACCAAGTCCAGCCCCTGGATTAGGCCCTAGGTTTAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CCA 90 bp TCCCAGCATTTAAACCTAGGGCCTAATCCAGGGGCTGGACTTGGTGCTTGCTTTTCACACTGGCCTCCATaGTGGCAGGGACAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SQHLNLGPNPGAGLGACFSHWPP*WQGQSW
Trigger: CCAGGACTGTCCCTGCCACCATGGAGGCCAGTGTGA...AAAGCAAGCACCAAGTCCAGCCCCTGGATTAGGCCCTAGGTTTAAATGCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CCA 90 bp CAGAAAGGCAGCAGGTGCAGGGTAGTTTTCCTTGTCAGTACAATGACAGAAGGCGCAGGAGCCATCCACTaGGGAACAGGTGCCGCCGTT +
Preference number: 4 (lower is better)
Translates to: QKGSRCRVVFLVSTMTEGAGAIH*GTGAAV
Trigger: AACGGCGGCACCTGTTCCCCAGTGGATGGCTCCTGC...GCCTTCTGTCATTGTACTGACAAGGAAAACTACCCTGCACCTGCTGCCTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CCA 90 bp AGACATCTGTCTTGGCTTCCCTGCTCTTGGGCGCAGAGATCTCTTGAGGGTGAGCCTCCAGCACACACTTaGTTGCACAAGGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: RHLSWLPCSWAQRSLEGEPPAHT*LHKAPE
Trigger: CTCTGGAGCCTTGTGCAACCAAGTGTGTGCTGGAGG...CTCACCCTCAAGAGATCTCTGCGCCCAAGAGCAGGGAAGCCAAGACAGATGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CCA 90 bp GCCCGAAGAGGGCAAGTGACTCAACAAGAGTGGTGCCAACTTCTCTTGACTTGCGACAGGAGCCATCGATaGGGCTGCAGGTCCCATTGT +
Preference number: 4 (lower is better)
Translates to: ARRGQVTQQEWCQLLLTCDRSHR*GCRSHC
Trigger: ACAATGGGACCTGCAGCCCCATCGATGGCTCCTGTC...GCAAGTCAAGAGAAGTTGGCACCACTCTTGTTGAGTCACTTGCCCTCTTCGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp AGCAGGTGCAGGGTAGTTTTCCTTGTCAGTACAATGACAGAAGGCCTCTGGGGCTCAGCTCATCCATCATaGGGGCAGCTTGGTCACACC +
Preference number: 4 (lower is better)
Translates to: SRCRVVFLVSTMTEGLWGSAHPS*GQLGHT
Trigger: GGTGTGACCAAGCTGCCCTCATGATGGATGAGCTGA...GCCCCAGAGGCCTTCTGTCATTGTACTGACAAGGAAAACTACCCTGCACCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR GCA 90 bp CTAGGGCCTAATCCAGGGGCTGGACTTGGTGCTTGCTTTTTGGCTTCACCTGTAAGCCATCAGCATGGCTaGAGTCGCAATGCTCACTGC +
Preference number: 4 (lower is better)
Translates to: LGPNPGAGLGACFLASPVSHQHG*SRNAHC
Trigger: GCAGTGAGCATTGCGACTGCAGCCATGCTGATGGCT...TACAGGTGAAGCCAAAAAGCAAGCACCAAGTCCAGCCCCTGGATTAGGCCCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR GCA 90 bp AGACATCTGTCTTGGCTTCCCTGCTCTTGGGCGCAGAGATCTCTTGAGGGTGAGCTCCGTTCTCACAGCTaGAGGACACTGAACAGTTGG +
Preference number: 4 (lower is better)
Translates to: RHLSWLPCSWAQRSLEGELRSHS*RTLNSW
Trigger: CCAACTGTTCAGTGTCCTGCAGCTGTGAGAACGGAG...CTCACCCTCAAGAGATCTCTGCGCCCAAGAGCAGGGAAGCCAAGACAGATGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR GCA 90 bp GAGTGCTACACTTGGAGAGTTGTTAGAGCTCTGCTCCCACTCTGTGTCTCTCTTCAGTCCTGCCCGAAGTaGCCTCCAGCACACACTTGG +
Preference number: 4 (lower is better)
Translates to: ECYTWRVVRALLPLCVSLQSCPK*PPAHTW
Trigger: CCAAGTGTGTGCTGGAGGGCACTTCGGGCAGGACTG...AAGAGAGACACAGAGTGGGAGCAGAGCTCTAACAACTCTCCAAGTGTAGCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp GAGTGCTACACTTGGAGAGTTGTTAGAGCTCTGCTCCCACTCTGTGTCTCTCTTCACTGGCCTCCATGGTaGCAGGGACAGTCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: ECYTWRVVRALLPLCVSLHWPPW*QGQSWL
Trigger: TAGCCAGGACTGTCCCTGCCACCATGGAGGCCAGTG...AAGAGAGACACAGAGTGGGAGCAGAGCTCTAACAACTCTCCAAGTGTAGCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp GAGTGCTACACTTGGAGAGTTGTTAGAGCTCTGCTCCCACTCTGTGTCTCTCTTTCACACTGGCCTCCATaGTGGCAGGGACAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: ECYTWRVVRALLPLCVSLSHWPP*WQGQSW
Trigger: CCAGGACTGTCCCTGCCACCATGGAGGCCAGTGTGA...AAGAGAGACACAGAGTGGGAGCAGAGCTCTAACAACTCTCCAAGTGTAGCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp GAGTGCTACACTTGGAGAGTTGTTAGAGCTCTGCTCCCACTCTGTGTCTCTCTTCAGATACCACTGATGTaGTGGCAGGGCCCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: ECYTWRVVRALLPLCVSLQIPLM*WQGPLL
Trigger: CAGCAGGGGGCCCTGCCACCACATCAGTGGTATCTG...AAGAGAGACACAGAGTGGGAGCAGAGCTCTAACAACTCTCCAAGTGTAGCACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp AGCAGGTGCAGGGTAGTTTTCCTTGTCAGTACAATGACAGAAGGCCTCTGGGGCTGCAGGTCCCATTGTTaGCACAGGAACAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SRCRVVFLVSTMTEGLWGCRSHC*HRNRAG
Trigger: CCCAGCTCTGTTCCTGTGCCAACAATGGGACCTGCA...GCCCCAGAGGCCTTCTGTCATTGTACTGACAAGGAAAACTACCCTGCACCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CCA 90 bp AGCAGGTGCAGGGTAGTTTTCCTTGTCAGTACAATGACAGAAGGCCTCTGGGGCGAGAGTAGTCTGTGCTaGTCATCCTCATGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SRCRVVFLVSTMTEGLWGESSLC*SSSWLG
Trigger: CCCCAGCCATGAGGATGACCAGCACAGACTACTCTC...GCCCCAGAGGCCTTCTGTCATTGTACTGACAAGGAAAACTACCCTGCACCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
3UTR CAA 72 bp GGGCAAGTGACTCAACAAGAGTGGTGCCAACTTCTCTaGACTTGCTGCTCTAGCCATCCCACCTCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: GQVTQQEWCQLL*TCCSSHPTSCW
Trigger: CCAGCAAGAGGTGGGATGGCTAGAGCAGCAAGTCAAGAGAAGTTGGCACCACTCTTGTTGAGTCACTTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR CAA 72 bp GGGCCTAATCCAGGGGCTGGACTTGGTGCTTGCTTTTaGGCTTCACCTGTAGACTTCCTAGAGGAATGGTCC +
Preference number: 4 (lower is better)
Translates to: GPNPGAGLGACF*ASPVDFLEEWS
Trigger: GGACCATTCCTCTAGGAAGTCTACAGGTGAAGCCAAAAAGCAAGCACCAAGTCCAGCCCCTGGATTAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR TCA 90 bp CTAGGGCCTAATCCAGGGGCTGGACTTGGTGCTTGCTTTTTGGCTTCACCTGTACTCCCAGAGCTGGACTaGTCTTGGTGTAGGGATTCA +
Preference number: 4 (lower is better)
Translates to: LGPNPGAGLGACFLASPVLPELD*SWCRDS
Trigger: TGAATCCCTACACCAAGATCAGTCCAGCTCTGGGAG...TACAGGTGAAGCCAAAAAGCAAGCACCAAGTCCAGCCCCTGGATTAGGCCCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR TCA 90 bp TCCTGTGGCGTAGACATCTGTCTTGGCTTCCCTGCTCTTGGGCGCAGAGATCTCGCATGGCTGCTACTTTaGGACAAATCTGAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: SCGVDICLGFPALGRRDLAWLLL*DKSERE
Trigger: CTCTCTCTCAGATTTGTCTCAAAGTAGCAGCCATGC...GAGATCTCTGCGCCCAAGAGCAGGGAAGCCAAGACAGATGTCTACGCCACAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR GCA 90 bp AAAGCACCAACTAATGGAATACATATTTGCCCACTTCAGGCGGTGGGCTTTTATAGAGGCACTCGCCAGTaGGCGGGTCACAGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: KAPTNGIHICPLQAVGFYRGTRQ*AGHSWR
Trigger: GCGCCAGCTGTGACCCGCGCACTGGCGAGTGCCTCT...ATAAAAGCCCACCGCCTGAAGTGGGCAAATATGTATTCCATTAGTTGGTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp CTTTTTGGCTTCACCTGTAGACTTCCTAGAGGAATGGTCCACCTTGTATGTAGTGTGCAGCCTGGGCCATaGAGGCCCTCAGGGCATAGC +
Preference number: 4 (lower is better)
Translates to: LFGFTCRLPRGMVHLVCSVQPGP*RPSGHS
Trigger: GCTATGCCCTGAGGGCCTGCATGGCCCAGGCTGCAC...ACTACATACAAGGTGGACCATTCCTCTAGGAAGTCTACAGGTGAAGCCAAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR GCA 90 bp ATTTGCCTTTGTGAACAGACTTTCTTGAACAGTTACCCCAGTCCCGTTTGGAAGGTGCAGCCTGGGCCATaGAGGCCCTCAGGGCATAGC +
Preference number: 4 (lower is better)
Translates to: ICLCEQTFLNSYPSPVWKVQPGP*RPSGHS
Trigger: GCTATGCCCTGAGGGCCTGCATGGCCCAGGCTGCAC...CTTCCAAACGGGACTGGGGTAACTGTTCAAGAAAGTCTGTTCACAAAGGCAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp GCAGATCTTTCCAAATTGACTATAGAATGCACAGCGCACATGTTGAGGCTGACCCCAGCCAGCCTGGGGTaGAGGCACAGGACCCATCAA +
Preference number: 4 (lower is better)
Translates to: ADLSKLTIECTAHMLRLTPASLG*RHRTHQ
Trigger: TTGATGGGTCCTGTGCCTGCACCCCAGGCTGGCTGG...GGTCAGCCTCAACATGTGCGCTGTGCATTCTATAGTCAATTTGGAAAGATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp GCTGGGTACTTTGTGCAGAGTGTAGTTGGCAAGAGAGAAGTGAGGTTTGGAATTGATGCCTGTCCATCCTaGCAGGCAGCAGCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: AGYFVQSVVGKREVRFGIDACPS*QAAAVA
Trigger: GGCCACTGCTGCTGCCTGGCAGGATGGACAGGCATC...AATTCCAAACCTCACTTCTCTCTTGCCAACTACACTCTGCACAAAGTACCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp GAAAGGCAGCAGGTGCAGGGTAGTTTTCCTTGTCAGTACAATGACAGAAGGCCTCCTGTGAGCAGTCCTTaGCAATCCACCCAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: ERQQVQGSFPCQYNDRRPPVSSP*QSTQGS
Trigger: GCTTCCCTGGGTGGATTGGCAAGGACTGCTCACAGG...AGGCCTTCTGTCATTGTACTGACAAGGAAAACTACCCTGCACCTGCTGCCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR GCA 90 bp GAGTGCTACACTTGGAGAGTTGTTAGAGCTCTGCTCCCACTCTGTGTCTCTCTTGCTGAAGGGCAACGCTaGGTGCAGAAGAGTCCAGTC +
Preference number: 4 (lower is better)
Translates to: ECYTWRVVRALLPLCVSLAEGQR*VQKSPV
Trigger: GACTGGACTCTTCTGCACGCAGCGTTGCCCTTCAGC...AAGAGAGACACAGAGTGGGAGCAGAGCTCTAACAACTCTCCAAGTGTAGCACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
CDS-3UTR CCA 90 bp TTAAGAACATGGGATGGCACAAAGGTGACCATTAACTTCCAACTTGTCCCTTCTCGCTGTCACAGCCGCTaGAGCAGTCAGGGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: LRTWDGTKVTINFQLVPSRCHSR*SSQGLP
Trigger: GGGGAGGCCCTGACTGCTCCAGCGGCTGTGACAGCG...AGAAGGGACAAGTTGGAAGTTAATGGTCACCTTTGTGCCATCCCATGTTCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp CATTTAAACCTAGGGCCTAATCCAGGGGCTGGACTTGGTGCTTGCTTTTTGGCTGTCACATGGTCACACTaGCCTCCATGGTGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: HLNLGPNPGAGLGACFLAVTWSH*PPWWQG
Trigger: TCCCTGCCACCATGGAGGCCAGTGTGACCATGTGAC...AGCCAAAAAGCAAGCACCAAGTCCAGCCCCTGGATTAGGCCCTAGGTTTAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CCA 90 bp ACAGAGTTCCAGAGCTCCCTGCCTAGCTCACGTGTCCCAGCATTTAAACCTAGGCATTGTCCAGTCACATaGTCACACTGGCCTCCATGG +
Preference number: 4 (lower is better)
Translates to: TEFQSSLPSSRVPAFKPRHCPVT*SHWPPW
Trigger: CCATGGAGGCCAGTGTGACCATGTGACTGGACAATG...CCTAGGTTTAAATGCTGGGACACGTGAGCTAGGCAGGGAGCTCTGGAACTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CCA 90 bp TTGGGAGCGTTCACTATTGCTGATGGCTCGCTTCCATGCACACATGCAGCATTCCCAGACCAGCCTGGTTaGCAGGTACAAGCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: LGAFTIADGSLPCTHAAFPDQPG*QVQAPV
Trigger: TACTGGAGCTTGTACCTGCCAACCAGGCTGGTCTGG...GAATGCTGCATGTGTGCATGGAAGCGAGCCATCAGCAATAGTGAACGCTCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp GAAAGGCAGCAGGTGCAGGGTAGTTTTCCTTGTCAGTACAATGACAGAAGGCCTCTCTCCCATGAAGCCTaGAGCACAAGTGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: ERQQVQGSFPCQYNDRRPLSHEA*STSAAP
Trigger: GGGAGCTGCACTTGTGCTCCAGGCTTCATGGGAGAG...AGGCCTTCTGTCATTGTACTGACAAGGAAAACTACCCTGCACCTGCTGCCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CCA 90 bp GATAGGATTTGCCTTTGTGAACAGACTTTCTTGAACAGTTACCCCAGTCCCGTTGGCCCCAGGTCCCACTaGGACAAGGCAGGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: DRICLCEQTFLNSYPSPVGPRSH*DKAGSS
Trigger: ACTGCTCCCTGCCTTGTCCCAGTGGGACCTGGGGCC...AACGGGACTGGGGTAACTGTTCAAGAAAGTCTGTTCACAAAGGCAAATCCTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp CCAGGTGAAGGAACTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAGTCCCCCAGCCAGCCTaGGGTGCAGGCACAGGACCC +
Preference number: 4 (lower is better)
Translates to: PGEGTNNTQLKAFCTDISVPQPA*GAGTGP
Trigger: GGGTCCTGTGCCTGCACCCCAGGCTGGCTGGGGGAC...TGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAGTTCCTTCACCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp GCTGGGTACTTTGTGCAGAGTGTAGTTGGCAAGAGAGAAGTGAGGTTTGGAATTGGGGCCCCAGCGACCTaGAGGACACGTGCTATCACA +
Preference number: 4 (lower is better)
Translates to: AGYFVQSVVGKREVRFGIGAPAT*RTRAIT
Trigger: TGTGATAGCACGTGTCCTCCAGGTCGCTGGGGCCCC...AATTCCAAACCTCACTTCTCTCTTGCCAACTACACTCTGCACAAAGTACCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp CTTTCTGTTTTGCCTACTATTACTGATAGGGCAGAAGAAAGTGAACCTGTCTTGGCGCCATGGTGGCACTaGCAGAGCAGCTGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LSVLPTITDRAEESEPVLAPWWH*QSSWQP
Trigger: GGGCTGCCAGCTGCTCTGTCAGTGCCACCATGGCGC...CAAGACAGGTTCACTTTCTTCTGCCCTATCAGTAATAGTAGGCAAAACAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp CAGAAAGGCAGCAGGTGCAGGGTAGTTTTCCTTGTCAGTACAATGACAGAAGGCTGGCAGTCACAGCGTTaGGAGCACAGGAAACCGAAC +
Preference number: 4 (lower is better)
Translates to: QKGSRCRVVFLVSTMTEGWQSQR*EHRKPN
Trigger: GTTCGGTTTCCTGTGCTCTCAACGCTGTGACTGCCA...GCCTTCTGTCATTGTACTGACAAGGAAAACTACCCTGCACCTGCTGCCTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR TCA 90 bp GATAGGATTTGCCTTTGTGAACAGACTTTCTTGAACAGTTACCCCAGTCCCGTTACAGCTGCAGGACACTaGACAGTTGGGGCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: DRICLCEQTFLNSYPSPVTAAGH*TVGAPA
Trigger: CGCTGGGGCCCCAACTGTTCAGTGTCCTGCAGCTGT...AACGGGACTGGGGTAACTGTTCAAGAAAGTCTGTTCACAAAGGCAAATCCTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp GACTTTCTTGAACAGTTACCCCAGTCCCGTTTGGAAGTGTTTCTTTCAATCCAGCACCCAGGGAAGCACTaGCAGGAGCCATCGATGGGG +
Preference number: 4 (lower is better)
Translates to: DFLEQLPQSRLEVFLSIQHPGKH*QEPSMG
Trigger: CCCCATCGATGGCTCCTGTCAGTGCTTCCCTGGGTG...CTGGATTGAAAGAAACACTTCCAAACGGGACTGGGGTAACTGTTCAAGAAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp ACTCAAGTATTGGGTGAACCAATGCAATGCAGCCAGGCCAGGATTGGCATTCGTCAGCTGGCTCCATTCTaGCACTGGCATATGTGCCCA +
Preference number: 4 (lower is better)
Translates to: TQVLGEPMQCSQARIGIRQLAPF*HWHMCP
Trigger: TGGGCACATATGCCAGTGTCAGAATGGAGCCAGCTG...ACGAATGCCAATCCTGGCCTGGCTGCATTGCATTGGTTCACCCAATACTTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp ACTCAAGTATTGGGTGAACCAATGCAATGCAGCCAGGCCAGGATTGGCATTCGTAGGTGCATTTCCCAGTaGTGTGGTCACAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: TQVLGEPMQCSQARIGIRRCISQ*CGHSWL
Trigger: GAGCCAGCTGTGACCACATCACTGGGAAATGCACCT...ACGAATGCCAATCCTGGCCTGGCTGCATTGCATTGGTTCACCCAATACTTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp ACTCAAGTATTGGGTGAACCAATGCAATGCAGCCAGGCCAGGATTGGCATTCGTTCAGCTCATCCATCATaGGGGCAGCTTGGTCACACC +
Preference number: 4 (lower is better)
Translates to: TQVLGEPMQCSQARIGIRSAHPS*GQLGHT
Trigger: GGTGTGACCAAGCTGCCCTCATGATGGATGAGCTGA...ACGAATGCCAATCCTGGCCTGGCTGCATTGCATTGGTTCACCCAATACTTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp GAAAGGCAGCAGGTGCAGGGTAGTTTTCCTTGTCAGTACAATGACAGAAGGCCTTGGCCTCCAGGGCACTaGTCTGGAAATGGGAGTCTA +
Preference number: 4 (lower is better)
Translates to: ERQQVQGSFPCQYNDRRPWPPGH*SGNGSL
Trigger: TAGACTCCCATTTCCAGATCAGTGCCCTGGAGGCCA...AGGCCTTCTGTCATTGTACTGACAAGGAAAACTACCCTGCACCTGCTGCCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR GCA 90 bp GCAGATCTTTCCAAATTGACTATAGAATGCACAGCGCACATGTTGAGGCTGACCCACCGTTCTGGCAGGTaGAGGGTAGCTGGCAACCGT +
Preference number: 4 (lower is better)
Translates to: ADLSKLTIECTAHMLRLTHRSGR*RVAGNR
Trigger: ACGGTTGCCAGCTACCCTGCACCTGCCAGAACGGTG...GGTCAGCCTCAACATGTGCGCTGTGCATTCTATAGTCAATTTGGAAAGATCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp GACTTTCTTGAACAGTTACCCCAGTCCCGTTTGGAAGTGTTTCTTTCAATCCAGGGGACCATAGGTCCCTaGAGCACAGGGGACGGCACA +
Preference number: 4 (lower is better)
Translates to: DFLEQLPQSRLEVFLSIQGTIGP*STGDGT
Trigger: TGTGCCGTCCCCTGTGCTGCAGGGACCTATGGTCCC...CTGGATTGAAAGAAACACTTCCAAACGGGACTGGGGTAACTGTTCAAGAAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp GACTTTCTTGAACAGTTACCCCAGTCCCGTTTGGAAGTGTTTCTTTCAATCCAGCCAGCCAGCCTGGGGTaGAGGCACAGGACCCATCAA +
Preference number: 4 (lower is better)
Translates to: DFLEQLPQSRLEVFLSIQPASLG*RHRTHQ
Trigger: TTGATGGGTCCTGTGCCTGCACCCCAGGCTGGCTGG...CTGGATTGAAAGAAACACTTCCAAACGGGACTGGGGTAACTGTTCAAGAAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp GATAGGATTTGCCTTTGTGAACAGACTTTCTTGAACAGTTACCCCAGTCCCGTTGATGCCTGTCCATCCTaGCAGGCAGCAGCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: DRICLCEQTFLNSYPSPVDACPS*QAAAVA
Trigger: GGCCACTGCTGCTGCCTGGCAGGATGGACAGGCATC...AACGGGACTGGGGTAACTGTTCAAGAAAGTCTGTTCACAAAGGCAAATCCTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp TGGAAGTTATGGACTTCTCTGGACAGGAGATTAAAAGCACCAACTAATGGAATAGGTGGCAGGGCCCCCTaGTGTGCACGCAGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: WKLWTSLDRRLKAPTNGIGGRAP*CARRGD
Trigger: GTCCCCTCTGCGTGCACAGCAGGGGGCCCTGCCACC...TATTCCATTAGTTGGTGCTTTTAATCTCCTGTCCAGAGAAGTCCATAACTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp CTAAGAGAGACGCTTATCCCTCTTACTGCTTTTCCTGGAAGGGCCCATGGGCAGCAGCACACACTTGGTTaGACAAGGCTCCAGAGAATC +
Preference number: 4 (lower is better)
Translates to: LRETLIPLTAFPGRAHGQQHTLG*TRLQRI
Trigger: GATTCTCTGGAGCCTTGTGCAACCAAGTGTGTGCTG...CTGCCCATGGGCCCTTCCAGGAAAAGCAGTAAGAGGGATAAGCGTCTCTCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
CDS-3UTR GCA 90 bp AGAACATGGGATGGCACAAAGGTGACCATTAACTTCCAACTTGTCCCTTCTGTTAGCTGGGCACAGTCCTaGCCGAAGTGCCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: RTWDGTKVTINFQLVPSVSWAQS*PKCPPA
Trigger: TGCTGGAGGGCACTTCGGGCAGGACTGTGCCCAGCT...AACAGAAGGGACAAGTTGGAAGTTAATGGTCACCTTTGTGCCATCCCATGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp CTTAGCTATGTGAAGGCTGCTGCTGTCACCATACTTAATCACATCTTTGCCCTTAGCTGGGCACAGTCCTaGCCGAAGTGCCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LSYVKAAAVTILNHIFALSWAQS*PKCPPA
Trigger: TGCTGGAGGGCACTTCGGGCAGGACTGTGCCCAGCT...AAGGGCAAAGATGTGATTAAGTATGGTGACAGCAGCAGCCTTCACATAGCTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp TGGAAGTTATGGACTTCTCTGGACAGGAGATTAAAAGCACCAACTAATGGAATACCCCATCCTCGGCGCTaGAGCTCGCCCCGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: WKLWTSLDRRLKAPTNGIPHPRR*SSPRCG
Trigger: GCCACAACGGGGCGAGCTGCAGCGCCGAGGATGGGG...TATTCCATTAGTTGGTGCTTTTAATCTCCTGTCCAGAGAAGTCCATAACTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
CDS-3UTR GCA 90 bp AGCAGGTGCAGGGTAGTTTTCCTTGTCAGTACAATGACAGAAGGCCTCTGGGGCAGAGAGAGTAGTCTGTaGTGGTCATCCTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: SRCRVVFLVSTMTEGLWGRESSL*WSSSWL
Trigger: CAGCCATGAGGATGACCAGCACAGACTACTCTCTCT...GCCCCAGAGGCCTTCTGTCATTGTACTGACAAGGAAAACTACCCTGCACCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR GCA 90 bp GCCCGAAGAGGGCAAGTGACTCAACAAGAGTGGTGCCAACTTCTCTTGACTTGCAGAGAGAGTAGTCTGTaGTGGTCATCCTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: ARRGQVTQQEWCQLLLTCRESSL*WSSSWL
Trigger: CAGCCATGAGGATGACCAGCACAGACTACTCTCTCT...GCAAGTCAAGAGAAGTTGGCACCACTCTTGTTGAGTCACTTGCCCTCTTCGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp GAAAGGCAGCAGGTGCAGGGTAGTTTTCCTTGTCAGTACAATGACAGAAGGCCTCCAGACCAGCCTGGTTaGCAGGTACAAGCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: ERQQVQGSFPCQYNDRRPPDQPG*QVQAPV
Trigger: TACTGGAGCTTGTACCTGCCAACCAGGCTGGTCTGG...AGGCCTTCTGTCATTGTACTGACAAGGAAAACTACCCTGCACCTGCTGCCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CCA 90 bp GACTTTCTTGAACAGTTACCCCAGTCCCGTTTGGAAGTGTTTCTTTCAATCCAGGGGGCCCCAGCGACCTaGAGGACACGTGCTATCACA +
Preference number: 4 (lower is better)
Translates to: DFLEQLPQSRLEVFLSIQGAPAT*RTRAIT
Trigger: TGTGATAGCACGTGTCCTCCAGGTCGCTGGGGCCCC...CTGGATTGAAAGAAACACTTCCAAACGGGACTGGGGTAACTGTTCAAGAAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp GAGTGCTACACTTGGAGAGTTGTTAGAGCTCTGCTCCCACTCTGTGTCTCTCTTTGCTGGTCATCCTCATaGCTGGGGTGTAGGAGACTC +
Preference number: 4 (lower is better)
Translates to: ECYTWRVVRALLPLCVSLCWSSS*LGCRRL
Trigger: GAGTCTCCTACACCCCAGCCATGAGGATGACCAGCA...AAGAGAGACACAGAGTGGGAGCAGAGCTCTAACAACTCTCCAAGTGTAGCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp AGACATCTGTCTTGGCTTCCCTGCTCTTGGGCGCAGAGATCTCTTGAGGGTGAGACAGCTACATACAGATaGACAGTTGGGACCATAGGT +
Preference number: 4 (lower is better)
Translates to: RHLSWLPCSWAQRSLEGETATYR*TVGTIG
Trigger: ACCTATGGTCCCAACTGTTCATCTGTATGTAGCTGT...CTCACCCTCAAGAGATCTCTGCGCCCAAGAGCAGGGAAGCCAAGACAGATGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR TCA 90 bp GTCGAAGTGTTGTATACTGGCTCTCCACCCTCACAGTTTCTACTTTTATCAGTTACAGCTGCAGGACACTaGACAGTTGGGGCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: VEVLYTGSPPSQFLLLSVTAAGH*TVGAPA
Trigger: CGCTGGGGCCCCAACTGTTCAGTGTCCTGCAGCTGT...AACTGATAAAAGTAGAAACTGTGAGGGTGGAGAGCCAGTATACAACACTTCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
CDS-3UTR TCA 90 bp GAGTGCTACACTTGGAGAGTTGTTAGAGCTCTGCTCCCACTCTGTGTCTCTCTTGGTGGGCAGATTCTCTaGCATAAGGGTCCTCGAAAG +
Preference number: 4 (lower is better)
Translates to: ECYTWRVVRALLPLCVSLGGQIL*HKGPRK
Trigger: CTTTCGAGGACCCTTATGTCAGAGAATCTGCCCACC...AAGAGAGACACAGAGTGGGAGCAGAGCTCTAACAACTCTCCAAGTGTAGCACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp GAAACAACCTTAGGAAGCACAGAGTTAATAAGTGACAGAGTTCCAGAGCTCCCTACTCACAGATACCACTaGTGTGGTGGCAGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: ETTLGSTELISDRVPELPTHRYH*CGGRAP
Trigger: GGGGGCCCTGCCACCACATCAGTGGTATCTGTGAGT...AGGGAGCTCTGGAACTCTGTCACTTATTAACTCTGTGCTTCCTAAGGTTGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR TCA 90 bp GATAGGATTTGCCTTTGTGAACAGACTTTCTTGAACAGTTACCCCAGTCCCGTTACTCACAGATACCACTaGTGTGGTGGCAGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: DRICLCEQTFLNSYPSPVTHRYH*CGGRAP
Trigger: GGGGGCCCTGCCACCACATCAGTGGTATCTGTGAGT...AACGGGACTGGGGTAACTGTTCAAGAAAGTCTGTTCACAAAGGCAAATCCTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp TTAAGAACATGGGATGGCACAAAGGTGACCATTAACTTCCAACTTGTCCCTTCTCACCCAGGGAAGCACTaGCAGGAGCCATCGATGGGG +
Preference number: 4 (lower is better)
Translates to: LRTWDGTKVTINFQLVPSHPGKH*QEPSMG
Trigger: CCCCATCGATGGCTCCTGTCAGTGCTTCCCTGGGTG...AGAAGGGACAAGTTGGAAGTTAATGGTCACCTTTGTGCCATCCCATGTTCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp TCCCAGCATTTAAACCTAGGGCCTAATCCAGGGGCTGGACTTGGTGCTTGCTTTAGAGCAAGAGCAGCTTaGAGAAGGAAGACAAGGAGG +
Preference number: 4 (lower is better)
Translates to: SQHLNLGPNPGAGLGACFRARAA*RRKTRR
Trigger: CCTCCTTGTCTTCCTTCTGCAAGCTGCTCTTGCTCT...AAAGCAAGCACCAAGTCCAGCCCCTGGATTAGGCCCTAGGTTTAAATGCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR GCA 90 bp CTTAGCTATGTGAAGGCTGCTGCTGTCACCATACTTAATCACATCTTTGCCCTTCACAGCGGCCGTGCATaGACTCCTCGGTACACAGAG +
Preference number: 4 (lower is better)
Translates to: LSYVKAAAVTILNHIFALHSGRA*TPRYTE
Trigger: CTCTGTGTACCGAGGAGTGCATGCACGGCCGCTGTG...AAGGGCAAAGATGTGATTAAGTATGGTGACAGCAGCAGCCTTCACATAGCTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp GGCATACCAAATGAACAGAGACCAAGATTAATATTAGAACAGTTCATGCCCACAAGAGGCACTCGCCAGTaGGCGGGTCACAGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: GIPNEQRPRLILEQFMPTRGTRQ*AGHSWR
Trigger: GCGCCAGCTGTGACCCGCGCACTGGCGAGTGCCTCT...TGTGGGCATGAACTGTTCTAATATTAATCTTGGTCTCTGTTCATTTGGTATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp GACTTTCTTGAACAGTTACCCCAGTCCCGTTTGGAAGTGTTTCTTTCAATCCAGCACCGTTCTGGCAGGTaGAGGGTAGCTGGCAACCGT +
Preference number: 4 (lower is better)
Translates to: DFLEQLPQSRLEVFLSIQHRSGR*RVAGNR
Trigger: ACGGTTGCCAGCTACCCTGCACCTGCCAGAACGGTG...CTGGATTGAAAGAAACACTTCCAAACGGGACTGGGGTAACTGTTCAAGAAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp GCTTCACCTGTAGACTTCCTAGAGGAATGGTCCACCTTGTATGTAGTTCCTGTGTGGCTGCAGTCGCAATaGTCACTGCAGTTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: ASPVDFLEEWSTLYVVPVWLQSQ*SLQFSP
Trigger: TGGGCTGAACTGCAGTGAGCATTGCGACTGCAGCCA...CACAGGAACTACATACAAGGTGGACCATTCCTCTAGGAAGTCTACAGGTGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR GCA 90 bp TGGACACCCAAGATAACCTTGTTAGATAATAAGACAGGCATGAGTCAACAGGCAGATGCCTGTCCATCCTaGCAGGCAGCAGCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: WTPKITLLDNKTGMSQQADACPS*QAAAVA
Trigger: GGCCACTGCTGCTGCCTGGCAGGATGGACAGGCATC...TGCCTGTTGACTCATGCCTGTCTTATTATCTAACAAGGTTATCTTGGGTGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR GCA 90 bp CTTCCCATCCGACTTTATTGGACACCCAAGATAACCTTGTTAGATAATAAGACACAGGGCCCCCTGCTGTaGACGCAGAGGGGACAAGGC +
Preference number: 4 (lower is better)
Translates to: LPIRLYWTPKITLLDNKTQGPLL*TQRGQG
Trigger: GCCTTGTCCCCTCTGCGTGCACAGCAGGGGGCCCTG...TGTCTTATTATCTAACAAGGTTATCTTGGGTGTCCAATAAAGTCGGATGGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR GCA 90 bp ATTTGCCTTTGTGAACAGACTTTCTTGAACAGTTACCCCAGTCCCGTTTGGAAGCCCCGTTGTGGCAGCTaGATGTGTGGAAGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: ICLCEQTFLNSYPSPVWKPRCGS*MCGSRQ
Trigger: CTGCCTGCTTCCACACATGCAGCTGCCACAACGGGG...CTTCCAAACGGGACTGGGGTAACTGTTCAAGAAAGTCTGTTCACAAAGGCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
CDS-3UTR GCA 90 bp ACTCAAGTATTGGGTGAACCAATGCAATGCAGCCAGGCCAGGATTGGCATTCGTTGTCCATTCCACAAGTaGCTGGTGAGTGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: TQVLGEPMQCSQARIGIRCPFHK*LVSVAQ
Trigger: CTGAGCCACACTCACCAGGCACTTGTGGAATGGACA...ACGAATGCCAATCCTGGCCTGGCTGCATTGCATTGGTTCACCCAATACTTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp CATTTAAACCTAGGGCCTAATCCAGGGGCTGGACTTGGTGCTTGCTTTTTGGCTTGTCCATTCCACAAGTaGCTGGTGAGTGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: HLNLGPNPGAGLGACFLACPFHK*LVSVAQ
Trigger: CTGAGCCACACTCACCAGGCACTTGTGGAATGGACA...AGCCAAAAAGCAAGCACCAAGTCCAGCCCCTGGATTAGGCCCTAGGTTTAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CCA 90 bp GCTTCACCTGTAGACTTCCTAGAGGAATGGTCCACCTTGTATGTAGTTCCTGTGCATTCGCCAGTGATGTaGTGGCAGGTGCCTCCATTC +
Preference number: 4 (lower is better)
Translates to: ASPVDFLEEWSTLYVVPVHSPVM*WQVPPF
Trigger: GAATGGAGGCACCTGCCACCACATCACTGGCGAATG...CACAGGAACTACATACAAGGTGGACCATTCCTCTAGGAAGTCTACAGGTGAAGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CCA 90 bp GACTTTCTTGAACAGTTACCCCAGTCCCGTTTGGAAGTGTTTCTTTCAATCCAGTCACACTGGCCTCCATaGTGGCAGGGACAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: DFLEQLPQSRLEVFLSIQSHWPP*WQGQSW
Trigger: CCAGGACTGTCCCTGCCACCATGGAGGCCAGTGTGA...CTGGATTGAAAGAAACACTTCCAAACGGGACTGGGGTAACTGTTCAAGAAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp AGCAGGTGCAGGGTAGTTTTCCTTGTCAGTACAATGACAGAAGGCCTCTGGGGCTATCCAGCTGTACAGTaGCATTGTCCAGTCACATGG +
Preference number: 4 (lower is better)
Translates to: SRCRVVFLVSTMTEGLWGYPAVQ*HCPVTW
Trigger: CCATGTGACTGGACAATGCCACTGTACAGCTGGATA...GCCCCAGAGGCCTTCTGTCATTGTACTGACAAGGAAAACTACCCTGCACCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CCA 90 bp GAAACAACCTTAGGAAGCACAGAGTTAATAAGTGACAGAGTTCCAGAGCTCCCTGTGGCCAGACCAGCCTaGTTGGCAGGTACAAGCTCC +
Preference number: 4 (lower is better)
Translates to: ETTLGSTELISDRVPELPVARPA*LAGTSS
Trigger: GGAGCTTGTACCTGCCAACCAGGCTGGTCTGGCCAC...AGGGAGCTCTGGAACTCTGTCACTTATTAACTCTGTGCTTCCTAAGGTTGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CCA 90 bp GACTTTCTTGAACAGTTACCCCAGTCCCGTTTGGAAGTGTTTCTTTCAATCCAGGTGGCCAGACCAGCCTaGTTGGCAGGTACAAGCTCC +
Preference number: 4 (lower is better)
Translates to: DFLEQLPQSRLEVFLSIQVARPA*LAGTSS
Trigger: GGAGCTTGTACCTGCCAACCAGGCTGGTCTGGCCAC...CTGGATTGAAAGAAACACTTCCAAACGGGACTGGGGTAACTGTTCAAGAAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp GACTTTCTTGAACAGTTACCCCAGTCCCGTTTGGAAGTGTTTCTTTCAATCCAGAGGACACTGAACAGTTaGGGCCCCAGCGACCTGGAG +
Preference number: 4 (lower is better)
Translates to: DFLEQLPQSRLEVFLSIQRTLNS*GPSDLE
Trigger: CTCCAGGTCGCTGGGGCCCCAACTGTTCAGTGTCCT...CTGGATTGAAAGAAACACTTCCAAACGGGACTGGGGTAACTGTTCAAGAAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp GATAGGATTTGCCTTTGTGAACAGACTTTCTTGAACAGTTACCCCAGTCCCGTTAGGACACTGAACAGTTaGGGCCCCAGCGACCTGGAG +
Preference number: 4 (lower is better)
Translates to: DRICLCEQTFLNSYPSPVRTLNS*GPSDLE
Trigger: CTCCAGGTCGCTGGGGCCCCAACTGTTCAGTGTCCT...AACGGGACTGGGGTAACTGTTCAAGAAAGTCTGTTCACAAAGGCAAATCCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp ATTTGCCTTTGTGAACAGACTTTCTTGAACAGTTACCCCAGTCCCGTTTGGAAGATACCACTGATGTGGTaGCAGGGCCCCCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: ICLCEQTFLNSYPSPVWKIPLMW*QGPLLC
Trigger: GCACAGCAGGGGGCCCTGCCACCACATCAGTGGTAT...CTTCCAAACGGGACTGGGGTAACTGTTCAAGAAAGTCTGTTCACAAAGGCAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp ATTTGCCTTTGTGAACAGACTTTCTTGAACAGTTACCCCAGTCCCGTTTGGAAGCAGATACCACTGATGTaGTGGCAGGGCCCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: ICLCEQTFLNSYPSPVWKQIPLM*WQGPLL
Trigger: CAGCAGGGGGCCCTGCCACCACATCAGTGGTATCTG...CTTCCAAACGGGACTGGGGTAACTGTTCAAGAAAGTCTGTTCACAAAGGCAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp GAAAGGCAGCAGGTGCAGGGTAGTTTTCCTTGTCAGTACAATGACAGAAGGCCTTGTGGTAGCTGGCATTaGAAAAGCACTGGGCATGGC +
Preference number: 4 (lower is better)
Translates to: ERQQVQGSFPCQYNDRRPCGSWH*KSTGHG
Trigger: GCCATGCCCAGTGCTTTTCCAATGCCAGCTACCACA...AGGCCTTCTGTCATTGTACTGACAAGGAAAACTACCCTGCACCTGCTGCCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CCA 90 bp ACTCAAGTATTGGGTGAACCAATGCAATGCAGCCAGGCCAGGATTGGCATTCGTCCAGTGTGTGGTAGCTaGCATTGGAAAAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: TQVLGEPMQCSQARIGIRPVCGS*HWKSTG
Trigger: CCCAGTGCTTTTCCAATGCCAGCTACCACACACTGG...ACGAATGCCAATCCTGGCCTGGCTGCATTGCATTGGTTCACCCAATACTTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR CAA 72 bp GGATGTGGTATGGAGATAGAGTGTGTGGAGGAGGGCTaGTTTTCACTTGAGATGCTGCACTGTTGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: GCGMEIECVEEG*FSLEMLHCCPG
Trigger: ACCAGGGCAACAGTGCAGCATCTCAAGTGAAAACAAGCCCTCCTCCACACACTCTATCTCCATACCACATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
CDS-3UTR TCA 90 bp AACAGAAGGATGTGGTATGGAGATAGAGTGTGTGGAGGAGGGCTTGTTTTCACTTGGCAGTCACAGCGTTaGGAGCACAGGAAACCGAAC +
Preference number: 4 (lower is better)
Translates to: NRRMWYGDRVCGGGLVFTWQSQR*EHRKPN
Trigger: GTTCGGTTTCCTGTGCTCTCAACGCTGTGACTGCCA...AGTGAAAACAAGCCCTCCTCCACACACTCTATCTCCATACCACATCCTTCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
CDS-3UTR TCA 90 bp GAAACAACCTTAGGAAGCACAGAGTTAATAAGTGACAGAGTTCCAGAGCTCCCTAAGTGCAGCTCCCGGTaGTACTGTGGCAGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: ETTLGSTELISDRVPELPKCSSR*YCGSQH
Trigger: GTGCTGACTGCCACAGTATCACCGGGAGCTGCACTT...AGGGAGCTCTGGAACTCTGTCACTTATTAACTCTGTGCTTCCTAAGGTTGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR TCA 90 bp ATTTGCCTTTGTGAACAGACTTTCTTGAACAGTTACCCCAGTCCCGTTTGGAAGAAGTGCAGCTCCCGGTaGTACTGTGGCAGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: ICLCEQTFLNSYPSPVWKKCSSR*YCGSQH
Trigger: GTGCTGACTGCCACAGTATCACCGGGAGCTGCACTT...CTTCCAAACGGGACTGGGGTAACTGTTCAAGAAAGTCTGTTCACAAAGGCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp TTACCTATTGTTACCTGTGCAGTGGAAGTTATGGACTTCTCTGGACAGGAGATTACTCACAGATACCACTaGTGTGGTGGCAGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: LPIVTCAVEVMDFSGQEITHRYH*CGGRAP
Trigger: GGGGGCCCTGCCACCACATCAGTGGTATCTGTGAGT...AATCTCCTGTCCAGAGAAGTCCATAACTTCCACTGCACAGGTAACAATAGGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp CCAGGTGAAGGAACTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCACACCCAGGGAAGCACTaGCAGGAGCCATCGATGGGG +
Preference number: 4 (lower is better)
Translates to: PGEGTNNTQLKAFCTDISHPGKH*QEPSMG
Trigger: CCCCATCGATGGCTCCTGTCAGTGCTTCCCTGGGTG...TGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAGTTCCTTCACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp CTACCACTAAGCTACATTCCCAGCCCTGTGACCATTTTCTTAAAACAGCATCTTTCCACAAGTGCCTGGTaGGTGTGGCTCAGCATGGCG +
Preference number: 4 (lower is better)
Translates to: LPLSYIPSPVTIFLKQHLSTSAW*VWLSMA
Trigger: CGCCATGCTGAGCCACACTCACCAGGCACTTGTGGA...AAGATGCTGTTTTAAGAAAATGGTCACAGGGCTGGGAATGTAGCTTAGTGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp TGGAAGTTATGGACTTCTCTGGACAGGAGATTAAAAGCACCAACTAATGGAATAGTGCAGCCTGGGCCATaGAGGCCCTCAGGGCATAGC +
Preference number: 4 (lower is better)
Translates to: WKLWTSLDRRLKAPTNGIVQPGP*RPSGHS
Trigger: GCTATGCCCTGAGGGCCTGCATGGCCCAGGCTGCAC...TATTCCATTAGTTGGTGCTTTTAATCTCCTGTCCAGAGAAGTCCATAACTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp CTACCACTAAGCTACATTCCCAGCCCTGTGACCATTTTCTTAAAACAGCATCTTCACCGTTCTGGCAGGTaGAGGGTAGCTGGCAACCGT +
Preference number: 4 (lower is better)
Translates to: LPLSYIPSPVTIFLKQHLHRSGR*RVAGNR
Trigger: ACGGTTGCCAGCTACCCTGCACCTGCCAGAACGGTG...AAGATGCTGTTTTAAGAAAATGGTCACAGGGCTGGGAATGTAGCTTAGTGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp CTTTCTGTTTTGCCTACTATTACTGATAGGGCAGAAGAAAGTGAACCTGTCTTGGGGACCATAGGTCCCTaGAGCACAGGGGACGGCACA +
Preference number: 4 (lower is better)
Translates to: LSVLPTITDRAEESEPVLGTIGP*STGDGT
Trigger: TGTGCCGTCCCCTGTGCTGCAGGGACCTATGGTCCC...CAAGACAGGTTCACTTTCTTCTGCCCTATCAGTAATAGTAGGCAAAACAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp CTAAGAGAGACGCTTATCCCTCTTACTGCTTTTCCTGGAAGGGCCCATGGGCAGCTCCATTGGCACAGATaGAAGTCTCATTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: LRETLIPLTAFPGRAHGQLHWHR*KSHCSS
Trigger: TGAACTGCAATGAGACTTGCATCTGTGCCAATGGAG...CTGCCCATGGGCCCTTCCAGGAAAAGCAGTAAGAGGGATAAGCGTCTCTCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
CDS-3UTR GCA 90 bp GATAGGATTTGCCTTTGTGAACAGACTTTCTTGAACAGTTACCCCAGTCCCGTTACCCATCAAAGGGGCTaGAGGCAGCTCCATTGGCAC +
Preference number: 4 (lower is better)
Translates to: DRICLCEQTFLNSYPSPVTHQRG*RQLHWH
Trigger: GTGCCAATGGAGCTGCCTGCAGCCCCTTTGATGGGT...AACGGGACTGGGGTAACTGTTCAAGAAAGTCTGTTCACAAAGGCAAATCCTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp CTTAGCTATGTGAAGGCTGCTGCTGTCACCATACTTAATCACATCTTTGCCCTTTGCTATCACAGCGGATaGCTGTCCATCCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LSYVKAAAVTILNHIFALCYHSG*LSILPG
Trigger: GCCTGGCAGGATGGACAGGCATCCGCTGTGATAGCA...AAGGGCAAAGATGTGATTAAGTATGGTGACAGCAGCAGCCTTCACATAGCTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp ATACTGAAACAGATGTTGAGGATAACAACAATCAACAGCACATACACATTTCAGGGTGGCAGGGCCCCCTaGTGTGCACGCAGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: ILKQMLRITTINSTYTFQGGRAP*CARRGD
Trigger: GTCCCCTCTGCGTGCACAGCAGGGGGCCCTGCCACC...CTGAAATGTGTATGTGCTGTTGATTGTTGTTATCCTCAACATCTGTTTCAGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp GACTTTCTTGAACAGTTACCCCAGTCCCGTTTGGAAGTGTTTCTTTCAATCCAGCCTGTGAGCAGTCCTTaGCAATCCACCCAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: DFLEQLPQSRLEVFLSIQPVSSP*QSTQGS
Trigger: GCTTCCCTGGGTGGATTGGCAAGGACTGCTCACAGG...CTGGATTGAAAGAAACACTTCCAAACGGGACTGGGGTAACTGTTCAAGAAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp TTACCTATTGTTACCTGTGCAGTGGAAGTTATGGACTTCTCTGGACAGGAGATTACAGCACCCACTGAGTaGCGCTCTGCTCCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: LPIVTCAVEVMDFSGQEITAPTE*RSAPRA
Trigger: AGCTCTGGGAGCAGAGCGGCACTCAGTGGGTGCTGT...AATCTCCTGTCCAGAGAAGTCCATAACTTCCACTGCACAGGTAACAATAGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp TACTGTTTCTATTTTATAAGGCTTTTGGGAGCGTTCACTATTGCTGATGGCTCGCGGCCTTTCTCTTTCTaGCGCCTCCGTCGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: YCFYFIRLLGAFTIADGSRPFSF*RLRRQA
Trigger: TGCCTGGCGACGGAGGCGGCAGAAAGAGAAAGGCCG...CGAGCCATCAGCAATAGTGAACGCTCCCAAAAGCCTTATAAAATAGAAACAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp CAGAAAGGCAGCAGGTGCAGGGTAGTTTTCCTTGTCAGTACAATGACAGAAGGCAGTGGCTACACACATTaGGGTCTTCAGGGTTCAGAG +
Preference number: 4 (lower is better)
Translates to: QKGSRCRVVFLVSTMTEGSGYTH*GLQGSE
Trigger: CTCTGAACCCTGAAGACCCCAATGTGTGTAGCCACT...GCCTTCTGTCATTGTACTGACAAGGAAAACTACCCTGCACCTGCTGCCTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CCA 90 bp CTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGATTGTCGCTGTCACAGCCGCTaGAGCAGTCAGGGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: LITHSSRHSVLIFQVMDCRCHSR*SSQGLP
Trigger: GGGGAGGCCCTGACTGCTCCAGCGGCTGTGACAGCG...ACAATCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp GATAGGATTTGCCTTTGTGAACAGACTTTCTTGAACAGTTACCCCAGTCCCGTTCTCTCCCATGAAGCCTaGAGCACAAGTGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: DRICLCEQTFLNSYPSPVLSHEA*STSAAP
Trigger: GGGAGCTGCACTTGTGCTCCAGGCTTCATGGGAGAG...AACGGGACTGGGGTAACTGTTCAAGAAAGTCTGTTCACAAAGGCAAATCCTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp TGCCCTTTCCCTTCTCTGTATAGCCTGACTGAACTATGTTACTTGAAATGTTGTGCAGGAGCCATCCACTaGGGAACAGGTGCCGCCGTT +
Preference number: 4 (lower is better)
Translates to: CPFPSLYSLTELCYLKCCAGAIH*GTGAAV
Trigger: AACGGCGGCACCTGTTCCCCAGTGGATGGCTCCTGC...ACAACATTTCAAGTAACATAGTTCAGTCAGGCTATACAGAGAAGGGAAAGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp TTCTTGAACTTTGACTTGGCAAAATTTGGTAAGGCTGGCATAGAAATCATTCTAGTCCCCCAGCCAGCCTaGGGTGCAGGCACAGGACCC +
Preference number: 4 (lower is better)
Translates to: FLNFDLAKFGKAGIEIILVPQPA*GAGTGP
Trigger: GGGTCCTGTGCCTGCACCCCAGGCTGGCTGGGGGAC...TAGAATGATTTCTATGCCAGCCTTACCAAATTTTGCCAAGTCAAAGTTCAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp ATTCCCTTAGATACTGAAACAGATGTTGAGGATAACAACAATCAACAGCACATAGTCCCCCAGCCAGCCTaGGGTGCAGGCACAGGACCC +
Preference number: 4 (lower is better)
Translates to: IPLDTETDVEDNNNQQHIVPQPA*GAGTGP
Trigger: GGGTCCTGTGCCTGCACCCCAGGCTGGCTGGGGGAC...TATGTGCTGTTGATTGTTGTTATCCTCAACATCTGTTTCAGTATCTAAGGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp CCAGGTGAAGGAACTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAGGGGCCCCAGCGACCTaGAGGACACGTGCTATCACA +
Preference number: 4 (lower is better)
Translates to: PGEGTNNTQLKAFCTDISGAPAT*RTRAIT
Trigger: TGTGATAGCACGTGTCCTCCAGGTCGCTGGGGCCCC...TGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAGTTCCTTCACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp CAGTGGAAGTTATGGACTTCTCTGGACAGGAGATTAAAAGCACCAACTAATGGAATACCACTGATGTGGTaGCAGGGCCCCCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: QWKLWTSLDRRLKAPTNGIPLMW*QGPLLC
Trigger: GCACAGCAGGGGGCCCTGCCACCACATCAGTGGTAT...TCCATTAGTTGGTGCTTTTAATCTCCTGTCCAGAGAAGTCCATAACTTCCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp AACAGAAGGATGTGGTATGGAGATAGAGTGTGTGGAGGAGGGCTTGTTTTCACTCCTCCAGCACACACTTaGTTGCACAAGGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: NRRMWYGDRVCGGGLVFTPPAHT*LHKAPE
Trigger: CTCTGGAGCCTTGTGCAACCAAGTGTGTGCTGGAGG...AGTGAAAACAAGCCCTCCTCCACACACTCTATCTCCATACCACATCCTTCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
CDS-3UTR CCA 90 bp GACTTTCTTGAACAGTTACCCCAGTCCCGTTTGGAAGTGTTTCTTTCAATCCAGGACAGGAGCCATCGATaGGGCTGCAGGTCCCATTGT +
Preference number: 4 (lower is better)
Translates to: DFLEQLPQSRLEVFLSIQDRSHR*GCRSHC
Trigger: ACAATGGGACCTGCAGCCCCATCGATGGCTCCTGTC...CTGGATTGAAAGAAACACTTCCAAACGGGACTGGGGTAACTGTTCAAGAAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp GCTTCACCTGTAGACTTCCTAGAGGAATGGTCCACCTTGTATGTAGTTCCTGTGCATCTCTGTTCACAGTaGCGGCCAGAGAAGCCTGTT +
Preference number: 4 (lower is better)
Translates to: ASPVDFLEEWSTLYVVPVHLCSQ*RPEKPV
Trigger: AACAGGCTTCTCTGGCCGCCACTGTGAACAGAGATG...CACAGGAACTACATACAAGGTGGACCATTCCTCTAGGAAGTCTACAGGTGAAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CCA 90 bp AACAGAAGGATGTGGTATGGAGATAGAGTGTGTGGAGGAGGGCTTGTTTTCACTTGCTGGTCATCCTCATaGCTGGGGTGTAGGAGACTC +
Preference number: 4 (lower is better)
Translates to: NRRMWYGDRVCGGGLVFTCWSSS*LGCRRL
Trigger: GAGTCTCCTACACCCCAGCCATGAGGATGACCAGCA...AGTGAAAACAAGCCCTCCTCCACACACTCTATCTCCATACCACATCCTTCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
CDS-3UTR CCA 90 bp GCTGGGTACTTTGTGCAGAGTGTAGTTGGCAAGAGAGAAGTGAGGTTTGGAATTGAGTGTGGCTCAGCATaGCGGCTGAGGTGTCTAAGT +
Preference number: 4 (lower is better)
Translates to: AGYFVQSVVGKREVRFGIECGSA*RLRCLS
Trigger: ACTTAGACACCTCAGCCGCCATGCTGAGCCACACTC...AATTCCAAACCTCACTTCTCTCTTGCCAACTACACTCTGCACAAAGTACCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp ACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGATTGTCTTCTTTGGCAGCCCTTGCCGTaGGTACCAGGAGCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: THSSRHSVLIFQVMDCLLWQPLP*VPGAQS
Trigger: ACTCTGCGCTCCTGGTACTCACGGCAAGGGCTGCCA...AAGAAGACAATCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp GGAACTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGATGGCAGCCCTTGCCGTaGGTACCAGGAGCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: GTNNTQLKAFCTDISSHGWQPLP*VPGAQS
Trigger: ACTCTGCGCTCCTGGTACTCACGGCAAGGGCTGCCA...TCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp TACTGTTTCTATTTTATAAGGCTTTTGGGAGCGTTCACTATTGCTGATGGCTCGAGGCACATTCGCCAGTaGTGTGGTGGCAGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: YCFYFIRLLGAFTIADGSRHIRQ*CGGRCL
Trigger: GAGGCACCTGCCACCACATCACTGGCGAATGTGCCT...CGAGCCATCAGCAATAGTGAACGCTCCCAAAAGCCTTATAAAATAGAAACAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp TTACCTATTGTTACCTGTGCAGTGGAAGTTATGGACTTCTCTGGACAGGAGATTAAGTGCAGCTCCCGGTaGTACTGTGGCAGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: LPIVTCAVEVMDFSGQEIKCSSR*YCGSQH
Trigger: GTGCTGACTGCCACAGTATCACCGGGAGCTGCACTT...AATCTCCTGTCCAGAGAAGTCCATAACTTCCACTGCACAGGTAACAATAGGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp AAAGCACCAACTAATGGAATACATATTTGCCCACTTCAGGCGGTGGGCTTTTATAGATGGGCAGGCCTGTaGGCAGTCCTTGCCAATCCA +
Preference number: 4 (lower is better)
Translates to: KAPTNGIHICPLQAVGFYRWAGL*AVLANP
Trigger: TGGATTGGCAAGGACTGCTCACAGGCCTGCCCATCT...ATAAAAGCCCACCGCCTGAAGTGGGCAAATATGTATTCCATTAGTTGGTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
CDS-3UTR TCA 90 bp GCCTTGGTGGGAGGGAAGAAAGTTCTATTTAACTTGTTGGGGAGAAAAACTGTGCAGCTGGCTCCATTCTaGCACTGGCATATGTGCCCA +
Preference number: 4 (lower is better)
Translates to: ALVGGKKVLFNLLGRKTVQLAPF*HWHMCP
Trigger: TGGGCACATATGCCAGTGTCAGAATGGAGCCAGCTG...CACAGTTTTTCTCCCCAACAAGTTAAATAGAACTTTCTTCCCTCCCACCAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
CDS-3UTR TCA 90 bp GAAACAACCTTAGGAAGCACAGAGTTAATAAGTGACAGAGTTCCAGAGCTCCCTCAGCTGGCTCCATTCTaGCACTGGCATATGTGCCCA +
Preference number: 4 (lower is better)
Translates to: ETTLGSTELISDRVPELPQLAPF*HWHMCP
Trigger: TGGGCACATATGCCAGTGTCAGAATGGAGCCAGCTG...AGGGAGCTCTGGAACTCTGTCACTTATTAACTCTGTGCTTCCTAAGGTTGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR TCA 90 bp GAAACAACCTTAGGAAGCACAGAGTTAATAAGTGACAGAGTTCCAGAGCTCCCTAGGTGCATTTCCCAGTaGTGTGGTCACAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: ETTLGSTELISDRVPELPRCISQ*CGHSWL
Trigger: GAGCCAGCTGTGACCACATCACTGGGAAATGCACCT...AGGGAGCTCTGGAACTCTGTCACTTATTAACTCTGTGCTTCCTAAGGTTGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR TCA 90 bp GACTTTCTTGAACAGTTACCCCAGTCCCGTTTGGAAGTGTTTCTTTCAATCCAGTCAGCTCATCCATCATaGGGGCAGCTTGGTCACACC +
Preference number: 4 (lower is better)
Translates to: DFLEQLPQSRLEVFLSIQSAHPS*GQLGHT
Trigger: GGTGTGACCAAGCTGCCCTCATGATGGATGAGCTGA...CTGGATTGAAAGAAACACTTCCAAACGGGACTGGGGTAACTGTTCAAGAAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp ACTCAAGTATTGGGTGAACCAATGCAATGCAGCCAGGCCAGGATTGGCATTCGTGCATGGCTGCTACTTTaGGACAAATCTGAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: TQVLGEPMQCSQARIGIRAWLLL*DKSERE
Trigger: CTCTCTCTCAGATTTGTCTCAAAGTAGCAGCCATGC...ACGAATGCCAATCCTGGCCTGGCTGCATTGCATTGGTTCACCCAATACTTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp CTTTCTGTTTTGCCTACTATTACTGATAGGGCAGAAGAAAGTGAACCTGTCTTGTCCACAAGTGCCTGGTaGGTGTGGCTCAGCATGGCG +
Preference number: 4 (lower is better)
Translates to: LSVLPTITDRAEESEPVLSTSAW*VWLSMA
Trigger: CGCCATGCTGAGCCACACTCACCAGGCACTTGTGGA...CAAGACAGGTTCACTTTCTTCTGCCCTATCAGTAATAGTAGGCAAAACAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp CCAGGTGAAGGAACTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCACACAGCGGCCGTGCATaGACTCCTCGGTACACAGAG +
Preference number: 4 (lower is better)
Translates to: PGEGTNNTQLKAFCTDISHSGRA*TPRYTE
Trigger: CTCTGTGTACCGAGGAGTGCATGCACGGCCGCTGTG...TGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAGTTCCTTCACCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp AAGGAACTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGTGCAGCCTGGGCCATaGAGGCCCTCAGGGCATAGC +
Preference number: 4 (lower is better)
Translates to: KELITHSSRHSVLIFQVMVQPGP*RPSGHS
Trigger: GCTATGCCCTGAGGGCCTGCATGGCCCAGGCTGCAC...CATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAGTTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp CAGTGGAAGTTATGGACTTCTCTGGACAGGAGATTAAAAGCACCAACTAATGGAACCCATCAAAGGGGCTaGAGGCAGCTCCATTGGCAC +
Preference number: 4 (lower is better)
Translates to: QWKLWTSLDRRLKAPTNGTHQRG*RQLHWH
Trigger: GTGCCAATGGAGCTGCCTGCAGCCCCTTTGATGGGT...TCCATTAGTTGGTGCTTTTAATCTCCTGTCCAGAGAAGTCCATAACTTCCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp ATACCAATTCCCTTAGATACTGAAACAGATGTTGAGGATAACAACAATCAACAGCAGGGCCCCCTGCTGTaGACGCAGAGGGGACAAGGC +
Preference number: 4 (lower is better)
Translates to: IPIPLDTETDVEDNNNQQQGPLL*TQRGQG
Trigger: GCCTTGTCCCCTCTGCGTGCACAGCAGGGGGCCCTG...CTGTTGATTGTTGTTATCCTCAACATCTGTTTCAGTATCTAAGGGAATTGGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp CCAGGTGAAGGAACTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCACAGTCCTGCCCGAAGTaGCCTCCAGCACACACTTGG +
Preference number: 4 (lower is better)
Translates to: PGEGTNNTQLKAFCTDISQSCPK*PPAHTW
Trigger: CCAAGTGTGTGCTGGAGGGCACTTCGGGCAGGACTG...TGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAGTTCCTTCACCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp ATCCGACTTTATTGGACACCCAAGATAACCTTGTTAGATAATAAGACAGGCATGAGCTGGGCACAGTCCTaGCCGAAGTGCCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: IRLYWTPKITLLDNKTGMSWAQS*PKCPPA
Trigger: TGCTGGAGGGCACTTCGGGCAGGACTGTGCCCAGCT...CATGCCTGTCTTATTATCTAACAAGGTTATCTTGGGTGTCCAATAAAGTCGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR GCA 90 bp GGCATACCAAATGAACAGAGACCAAGATTAATATTAGAACAGTTCATGCCCACAAGCTGGGCACAGTCCTaGCCGAAGTGCCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GIPNEQRPRLILEQFMPTSWAQS*PKCPPA
Trigger: TGCTGGAGGGCACTTCGGGCAGGACTGTGCCCAGCT...TGTGGGCATGAACTGTTCTAATATTAATCTTGGTCTCTGTTCATTTGGTATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp TCTGTTTTGCCTACTATTACTGATAGGGCAGAAGAAAGTGAACCTGTCTTGATTCGGCCTTTCTCTTTCTaGCGCCTCCGTCGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: SVLPTITDRAEESEPVLIRPFSF*RLRRQA
Trigger: TGCCTGGCGACGGAGGCGGCAGAAAGAGAAAGGCCG...AATCAAGACAGGTTCACTTTCTTCTGCCCTATCAGTAATAGTAGGCAAAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp CTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGATTGTACCTCCGCCGGTACATaGTCCGGAGGCCGCGCCTAT +
Preference number: 4 (lower is better)
Translates to: LITHSSRHSVLIFQVMDCTSAGT*SGGRAY
Trigger: ATAGGCGCGGCCTCCGGACCATGTACCGGCGGAGGT...ACAATCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp ATACTGAAACAGATGTTGAGGATAACAACAATCAACAGCACATACACATTTCAGCGCTGTCACAGCCGCTaGAGCAGTCAGGGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: ILKQMLRITTINSTYTFQRCHSR*SSQGLP
Trigger: GGGGAGGCCCTGACTGCTCCAGCGGCTGTGACAGCG...CTGAAATGTGTATGTGCTGTTGATTGTTGTTATCCTCAACATCTGTTTCAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp AACGGCCATTCTGATTGTTTTCGTTTTCCGCTTTGGATTTGTATTAACAGTAGTTGCTCCCGTCCAGCCTaGAGGGCAGGCACATTCGCC +
Preference number: 4 (lower is better)
Translates to: NGHSDCFRFPLWICINSSCSRPA*RAGTFA
Trigger: GGCGAATGTGCCTGCCCTCCAGGCTGGACGGGAGCA...ACTACTGTTAATACAAATCCAAAGCGGAAAACGAAAACAATCAGAATGGCCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
CDS-3UTR CCA 90 bp CTATTGTTACCTGTGCAGTGGAAGTTATGGACTTCTCTGGACAGGAGATTAAAAGTGGCCAGACCAGCCTaGTTGGCAGGTACAAGCTCC +
Preference number: 4 (lower is better)
Translates to: LLLPVQWKLWTSLDRRLKVARPA*LAGTSS
Trigger: GGAGCTTGTACCTGCCAACCAGGCTGGTCTGGCCAC...TTTTAATCTCCTGTCCAGAGAAGTCCATAACTTCCACTGCACAGGTAACAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp CCAGGTGAAGGAACTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAGTGGCCAGACCAGCCTaGTTGGCAGGTACAAGCTCC +
Preference number: 4 (lower is better)
Translates to: PGEGTNNTQLKAFCTDISVARPA*LAGTSS
Trigger: GGAGCTTGTACCTGCCAACCAGGCTGGTCTGGCCAC...TGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAGTTCCTTCACCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp CAGTGGAAGTTATGGACTTCTCTGGACAGGAGATTAAAAGCACCAACTAATGGACTCTCCCATGAAGCCTaGAGCACAAGTGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: QWKLWTSLDRRLKAPTNGLSHEA*STSAAP
Trigger: GGGAGCTGCACTTGTGCTCCAGGCTTCATGGGAGAG...TCCATTAGTTGGTGCTTTTAATCTCCTGTCCAGAGAAGTCCATAACTTCCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp CAGAAAGGCAGCAGGTGCAGGGTAGTTTTCCTTGTCAGTACAATGACAGAAGGCATACAGATGAACAGTTaGGACCATAGGTCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: QKGSRCRVVFLVSTMTEGIQMNS*DHRSLQ
Trigger: CTGCAGGGACCTATGGTCCCAACTGTTCATCTGTAT...GCCTTCTGTCATTGTACTGACAAGGAAAACTACCCTGCACCTGCTGCCTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CCA 90 bp GGAACTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGAGCAGGAGCCATCCACTaGGGAACAGGTGCCGCCGTT +
Preference number: 4 (lower is better)
Translates to: GTNNTQLKAFCTDISSHGAGAIH*GTGAAV
Trigger: AACGGCGGCACCTGTTCCCCAGTGGATGGCTCCTGC...TCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp ATCCGACTTTATTGGACACCCAAGATAACCTTGTTAGATAATAAGACAGGCATGGGGGCCCCAGCGACCTaGAGGACACGTGCTATCACA +
Preference number: 4 (lower is better)
Translates to: IRLYWTPKITLLDNKTGMGAPAT*RTRAIT
Trigger: TGTGATAGCACGTGTCCTCCAGGTCGCTGGGGCCCC...CATGCCTGTCTTATTATCTAACAAGGTTATCTTGGGTGTCCAATAAAGTCGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CCA 90 bp GAAACAACCTTAGGAAGCACAGAGTTAATAAGTGACAGAGTTCCAGAGCTCCCTGGCTCCAGAGAATCCTaGCAGGCACTCACAGATACC +
Preference number: 4 (lower is better)
Translates to: ETTLGSTELISDRVPELPGSRES*QALTDT
Trigger: GGTATCTGTGAGTGCCTGCCAGGATTCTCTGGAGCC...AGGGAGCTCTGGAACTCTGTCACTTATTAACTCTGTGCTTCCTAAGGTTGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CCA 90 bp GACTTTCTTGAACAGTTACCCCAGTCCCGTTTGGAAGTGTTTCTTTCAATCCAGCCTCCAGCACACACTTaGTTGCACAAGGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: DFLEQLPQSRLEVFLSIQPPAHT*LHKAPE
Trigger: CTCTGGAGCCTTGTGCAACCAAGTGTGTGCTGGAGG...CTGGATTGAAAGAAACACTTCCAAACGGGACTGGGGTAACTGTTCAAGAAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp GCCTTGGTGGGAGGGAAGAAAGTTCTATTTAACTTGTTGGGGAGAAAAACTGTGTGCAGGTCCCATTGTTaGCACAGGAACAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: ALVGGKKVLFNLLGRKTVCRSHC*HRNRAG
Trigger: CCCAGCTCTGTTCCTGTGCCAACAATGGGACCTGCA...CACAGTTTTTCTCCCCAACAAGTTAAATAGAACTTTCTTCCCTCCCACCAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
CDS-3UTR CCA 90 bp CTACCACTAAGCTACATTCCCAGCCCTGTGACCATTTTCTTAAAACAGCATCTTGACAGGAGCCATCGATaGGGCTGCAGGTCCCATTGT +
Preference number: 4 (lower is better)
Translates to: LPLSYIPSPVTIFLKQHLDRSHR*GCRSHC
Trigger: ACAATGGGACCTGCAGCCCCATCGATGGCTCCTGTC...AAGATGCTGTTTTAAGAAAATGGTCACAGGGCTGGGAATGTAGCTTAGTGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp TACTGTTTCTATTTTATAAGGCTTTTGGGAGCGTTCACTATTGCTGATGGCTCGCAGCTCGCCCCGTTGTaGCAGCTGCATGTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: YCFYFIRLLGAFTIADGSQLAPL*QLHVWK
Trigger: CTTCCACACATGCAGCTGCCACAACGGGGCGAGCTG...CGAGCCATCAGCAATAGTGAACGCTCCCAAAAGCCTTATAAAATAGAAACAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
CDS-3UTR CCA 90 bp GAAAGGCAGCAGGTGCAGGGTAGTTTTCCTTGTCAGTACAATGACAGAAGGCCTATCATGAGGGCAGCTTaGTCACACCTGATTCCTTTG +
Preference number: 4 (lower is better)
Translates to: ERQQVQGSFPCQYNDRRPIMRAA*SHLIPL
Trigger: CAAAGGAATCAGGTGTGACCAAGCTGCCCTCATGAT...AGGCCTTCTGTCATTGTACTGACAAGGAAAACTACCCTGCACCTGCTGCCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CCA 90 bp ATTTGCCTTTGTGAACAGACTTTCTTGAACAGTTACCCCAGTCCCGTTTGGAAGCTCTGCTCCCAGAGCTaGACTGATCTTGGTGTAGGG +
Preference number: 4 (lower is better)
Translates to: ICLCEQTFLNSYPSPVWKLCSQS*TDLGVG
Trigger: CCCTACACCAAGATCAGTCCAGCTCTGGGAGCAGAG...CTTCCAAACGGGACTGGGGTAACTGTTCAAGAAAGTCTGTTCACAAAGGCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp ATTTGCCTTTGTGAACAGACTTTCTTGAACAGTTACCCCAGTCCCGTTTGGAAGGAGTGTGGCTCAGCATaGCGGCTGAGGTGTCTAAGT +
Preference number: 4 (lower is better)
Translates to: ICLCEQTFLNSYPSPVWKECGSA*RLRCLS
Trigger: ACTTAGACACCTCAGCCGCCATGCTGAGCCACACTC...CTTCCAAACGGGACTGGGGTAACTGTTCAAGAAAGTCTGTTCACAAAGGCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp CTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGATTGTTGGCAGCCCTTGCCGTaGGTACCAGGAGCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: LITHSSRHSVLIFQVMDCWQPLP*VPGAQS
Trigger: ACTCTGCGCTCCTGGTACTCACGGCAAGGGCTGCCA...ACAATCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp TGGAAGTTATGGACTTCTCTGGACAGGAGATTAAAAGCACCAACTAATGGAATAAGGCACATTCGCCAGTaGTGTGGTGGCAGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: WKLWTSLDRRLKAPTNGIRHIRQ*CGGRCL
Trigger: GAGGCACCTGCCACCACATCACTGGCGAATGTGCCT...TATTCCATTAGTTGGTGCTTTTAATCTCCTGTCCAGAGAAGTCCATAACTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp GGAACTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGAAGGCACATTCGCCAGTaGTGTGGTGGCAGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: GTNNTQLKAFCTDISSHGRHIRQ*CGGRCL
Trigger: GAGGCACCTGCCACCACATCACTGGCGAATGTGCCT...TCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp CTACCACTAAGCTACATTCCCAGCCCTGTGACCATTTTCTTAAAACAGCATCTTTGGCAGTCACAGCGTTaGGAGCACAGGAAACCGAAC +
Preference number: 4 (lower is better)
Translates to: LPLSYIPSPVTIFLKQHLWQSQR*EHRKPN
Trigger: GTTCGGTTTCCTGTGCTCTCAACGCTGTGACTGCCA...AAGATGCTGTTTTAAGAAAATGGTCACAGGGCTGGGAATGTAGCTTAGTGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp GACTTTCTTGAACAGTTACCCCAGTCCCGTTTGGAAGTGTTTCTTTCAATCCAGGTGGCTGGTGAACATTaGCCTCCATTGTGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: DFLEQLPQSRLEVFLSIQVAGEH*PPLWQS
Trigger: TGACTGCCACAATGGAGGTCAATGTTCACCAGCCAC...CTGGATTGAAAGAAACACTTCCAAACGGGACTGGGGTAACTGTTCAAGAAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp TGCCCTTTCCCTTCTCTGTATAGCCTGACTGAACTATGTTACTTGAAATGTTGTCACACACCTCTCCCATaGAGCCTGGAGCACAAGTGC +
Preference number: 4 (lower is better)
Translates to: CPFPSLYSLTELCYLKCCHTPLP*SLEHKC
Trigger: GCACTTGTGCTCCAGGCTTCATGGGAGAGGTGTGTG...ACAACATTTCAAGTAACATAGTTCAGTCAGGCTATACAGAGAAGGGAAAGGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp AAGGAACTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGACAGCTGCAGGACACTaGACAGTTGGGGCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: KELITHSSRHSVLIFQVMTAAGH*TVGAPA
Trigger: CGCTGGGGCCCCAACTGTTCAGTGTCCTGCAGCTGT...CATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAGTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp GCCTTGGTGGGAGGGAAGAAAGTTCTATTTAACTTGTTGGGGAGAAAAACTGTGGGTGGGCAGATTCTCTaGCATAAGGGTCCTCGAAAG +
Preference number: 4 (lower is better)
Translates to: ALVGGKKVLFNLLGRKTVGGQIL*HKGPRK
Trigger: CTTTCGAGGACCCTTATGTCAGAGAATCTGCCCACC...CACAGTTTTTCTCCCCAACAAGTTAAATAGAACTTTCTTCCCTCCCACCAAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
CDS-3UTR TCA 90 bp CTTTTTGGCTTCACCTGTAGACTTCCTAGAGGAATGGTCCACCTTGTATGTAGTGGTGGGCAGATTCTCTaGCATAAGGGTCCTCGAAAG +
Preference number: 4 (lower is better)
Translates to: LFGFTCRLPRGMVHLVCSGGQIL*HKGPRK
Trigger: CTTTCGAGGACCCTTATGTCAGAGAATCTGCCCACC...ACTACATACAAGGTGGACCATTCCTCTAGGAAGTCTACAGGTGAAGCCAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR TCA 90 bp CTTTATTGGACACCCAAGATAACCTTGTTAGATAATAAGACAGGCATGAGTCAACACCCAGGGAAGCACTaGCAGGAGCCATCGATGGGG +
Preference number: 4 (lower is better)
Translates to: LYWTPKITLLDNKTGMSQHPGKH*QEPSMG
Trigger: CCCCATCGATGGCTCCTGTCAGTGCTTCCCTGGGTG...TTGACTCATGCCTGTCTTATTATCTAACAAGGTTATCTTGGGTGTCCAATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR TCA 90 bp AAAGCACCAACTAATGGAATACATATTTGCCCACTTCAGGCGGTGGGCTTTTATAGGTGCATTTCCCAGTaGTGTGGTCACAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: KAPTNGIHICPLQAVGFYRCISQ*CGHSWL
Trigger: GAGCCAGCTGTGACCACATCACTGGGAAATGCACCT...ATAAAAGCCCACCGCCTGAAGTGGGCAAATATGTATTCCATTAGTTGGTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp GACTTTCTTGAACAGTTACCCCAGTCCCGTTTGGAAGTGTTTCTTTCAATCCAGCTCCCAGAGCTGGACTaGTCTTGGTGTAGGGATTCA +
Preference number: 4 (lower is better)
Translates to: DFLEQLPQSRLEVFLSIQLPELD*SWCRDS
Trigger: TGAATCCCTACACCAAGATCAGTCCAGCTCTGGGAG...CTGGATTGAAAGAAACACTTCCAAACGGGACTGGGGTAACTGTTCAAGAAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp GATAGGATTTGCCTTTGTGAACAGACTTTCTTGAACAGTTACCCCAGTCCCGTTCTCCCAGAGCTGGACTaGTCTTGGTGTAGGGATTCA +
Preference number: 4 (lower is better)
Translates to: DRICLCEQTFLNSYPSPVLPELD*SWCRDS
Trigger: TGAATCCCTACACCAAGATCAGTCCAGCTCTGGGAG...AACGGGACTGGGGTAACTGTTCAAGAAAGTCTGTTCACAAAGGCAAATCCTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp CTTCCCATCCGACTTTATTGGACACCCAAGATAACCTTGTTAGATAATAAGACACACCGTTCTGGCAGGTaGAGGGTAGCTGGCAACCGT +
Preference number: 4 (lower is better)
Translates to: LPIRLYWTPKITLLDNKTHRSGR*RVAGNR
Trigger: ACGGTTGCCAGCTACCCTGCACCTGCCAGAACGGTG...TGTCTTATTATCTAACAAGGTTATCTTGGGTGTCCAATAAAGTCGGATGGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR GCA 90 bp GTCGAAGTGTTGTATACTGGCTCTCCACCCTCACAGTTTCTACTTTTATCAGTTTGGCTGCAGTCGCAATaGTCACTGCAGTTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: VEVLYTGSPPSQFLLLSVWLQSQ*SLQFSP
Trigger: TGGGCTGAACTGCAGTGAGCATTGCGACTGCAGCCA...AACTGATAAAAGTAGAAACTGTGAGGGTGGAGAGCCAGTATACAACACTTCGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
CDS-3UTR GCA 90 bp CTACCACTAAGCTACATTCCCAGCCCTGTGACCATTTTCTTAAAACAGCATCTTTGGCTGCAGTCGCAATaGTCACTGCAGTTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: LPLSYIPSPVTIFLKQHLWLQSQ*SLQFSP
Trigger: TGGGCTGAACTGCAGTGAGCATTGCGACTGCAGCCA...AAGATGCTGTTTTAAGAAAATGGTCACAGGGCTGGGAATGTAGCTTAGTGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp AAGGAACTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGATGCCTGTCCATCCTaGCAGGCAGCAGCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: KELITHSSRHSVLIFQVMDACPS*QAAAVA
Trigger: GGCCACTGCTGCTGCCTGGCAGGATGGACAGGCATC...CATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAGTTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp GATAGGATTTGCCTTTGTGAACAGACTTTCTTGAACAGTTACCCCAGTCCCGTTCTCCGTTCTCACAGCTaGAGGACACTGAACAGTTGG +
Preference number: 4 (lower is better)
Translates to: DRICLCEQTFLNSYPSPVLRSHS*RTLNSW
Trigger: CCAACTGTTCAGTGTCCTGCAGCTGTGAGAACGGAG...AACGGGACTGGGGTAACTGTTCAAGAAAGTCTGTTCACAAAGGCAAATCCTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp GGCATACCAAATGAACAGAGACCAAGATTAATATTAGAACAGTTCATGCCCACACAGTCCTGCCCGAAGTaGCCTCCAGCACACACTTGG +
Preference number: 4 (lower is better)
Translates to: GIPNEQRPRLILEQFMPTQSCPK*PPAHTW
Trigger: CCAAGTGTGTGCTGGAGGGCACTTCGGGCAGGACTG...TGTGGGCATGAACTGTTCTAATATTAATCTTGGTCTCTGTTCATTTGGTATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp CTTCCCATCCGACTTTATTGGACACCCAAGATAACCTTGTTAGATAATAAGACACAGTCCTGCCCGAAGTaGCCTCCAGCACACACTTGG +
Preference number: 4 (lower is better)
Translates to: LPIRLYWTPKITLLDNKTQSCPK*PPAHTW
Trigger: CCAAGTGTGTGCTGGAGGGCACTTCGGGCAGGACTG...TGTCTTATTATCTAACAAGGTTATCTTGGGTGTCCAATAAAGTCGGATGGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR GCA 90 bp TCTGTTTTGCCTACTATTACTGATAGGGCAGAAGAAAGTGAACCTGTCTTGATTCCCCGTTGTGGCAGCTaGATGTGTGGAAGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SVLPTITDRAEESEPVLIPRCGS*MCGSRQ
Trigger: CTGCCTGCTTCCACACATGCAGCTGCCACAACGGGG...AATCAAGACAGGTTCACTTTCTTCTGCCCTATCAGTAATAGTAGGCAAAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
CDS-3UTR GCA 90 bp ACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGATTGTCTTCTTACAGCACCCACTGAGTaGCGCTCTGCTCCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: THSSRHSVLIFQVMDCLLTAPTE*RSAPRA
Trigger: AGCTCTGGGAGCAGAGCGGCACTCAGTGGGTGCTGT...AAGAAGACAATCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp CTATTGTTACCTGTGCAGTGGAAGTTATGGACTTCTCTGGACAGGAGATTAAAAGTAGGGGGTCCAGCCTaGTGTGTCTCTGTCAAGGGA +
Preference number: 4 (lower is better)
Translates to: LLLPVQWKLWTSLDRRLKVGGPA*CVSVKG
Trigger: TCCCTTGACAGAGACACAGCAGGCTGGACCCCCTAC...TTTTAATCTCCTGTCCAGAGAAGTCCATAACTTCCACTGCACAGGTAACAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp GTCGAAGTGTTGTATACTGGCTCTCCACCCTCACAGTTTCTACTTTTATCAGTTCATTCGCCAGTGATGTaGTGGCAGGTGCCTCCATTC +
Preference number: 4 (lower is better)
Translates to: VEVLYTGSPPSQFLLLSVHSPVM*WQVPPF
Trigger: GAATGGAGGCACCTGCCACCACATCACTGGCGAATG...AACTGATAAAAGTAGAAACTGTGAGGGTGGAGAGCCAGTATACAACACTTCGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
CDS-3UTR CCA 90 bp CTACCACTAAGCTACATTCCCAGCCCTGTGACCATTTTCTTAAAACAGCATCTTCATTCGCCAGTGATGTaGTGGCAGGTGCCTCCATTC +
Preference number: 4 (lower is better)
Translates to: LPLSYIPSPVTIFLKQHLHSPVM*WQVPPF
Trigger: GAATGGAGGCACCTGCCACCACATCACTGGCGAATG...AAGATGCTGTTTTAAGAAAATGGTCACAGGGCTGGGAATGTAGCTTAGTGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp ATTCCCTTAGATACTGAAACAGATGTTGAGGATAACAACAATCAACAGCACATATGCTCCCGTCCAGCCTaGAGGGCAGGCACATTCGCC +
Preference number: 4 (lower is better)
Translates to: IPLDTETDVEDNNNQQHICSRPA*RAGTFA
Trigger: GGCGAATGTGCCTGCCCTCCAGGCTGGACGGGAGCA...TATGTGCTGTTGATTGTTGTTATCCTCAACATCTGTTTCAGTATCTAAGGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp TTCTTGAACTTTGACTTGGCAAAATTTGGTAAGGCTGGCATAGAAATCATTCTATGCTCCCGTCCAGCCTaGAGGGCAGGCACATTCGCC +
Preference number: 4 (lower is better)
Translates to: FLNFDLAKFGKAGIEIILCSRPA*RAGTFA
Trigger: GGCGAATGTGCCTGCCCTCCAGGCTGGACGGGAGCA...TAGAATGATTTCTATGCCAGCCTTACCAAATTTTGCCAAGTCAAAGTTCAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp TGGACACCCAAGATAACCTTGTTAGATAATAAGACAGGCATGAGTCAACAGGCATGGCAGGGACAGTCCTaGCTACAGTTCTGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: WTPKITLLDNKTGMSQQAWQGQS*LQFWPK
Trigger: CTTTGGCCAGAACTGTAGCCAGGACTGTCCCTGCCA...TGCCTGTTGACTCATGCCTGTCTTATTATCTAACAAGGTTATCTTGGGTGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CCA 90 bp CTTTCTGTTTTGCCTACTATTACTGATAGGGCAGAAGAAAGTGAACCTGTCTTGCTCTCCCATGAAGCCTaGAGCACAAGTGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: LSVLPTITDRAEESEPVLLSHEA*STSAAP
Trigger: GGGAGCTGCACTTGTGCTCCAGGCTTCATGGGAGAG...CAAGACAGGTTCACTTTCTTCTGCCCTATCAGTAATAGTAGGCAAAACAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp ATACTGAAACAGATGTTGAGGATAACAACAATCAACAGCACATACACATTTCAGGGCCCCAGGTCCCACTaGGACAAGGCAGGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: ILKQMLRITTINSTYTFQGPRSH*DKAGSS
Trigger: ACTGCTCCCTGCCTTGTCCCAGTGGGACCTGGGGCC...CTGAAATGTGTATGTGCTGTTGATTGTTGTTATCCTCAACATCTGTTTCAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp ATTTGCCTTTGTGAACAGACTTTCTTGAACAGTTACCCCAGTCCCGTTTGGAAGTCACAGCCATCAGCATaGCTGCAGTCGCAATGCTCA +
Preference number: 4 (lower is better)
Translates to: ICLCEQTFLNSYPSPVWKSQPSA*LQSQCS
Trigger: TGAGCATTGCGACTGCAGCCATGCTGATGGCTGTGA...CTTCCAAACGGGACTGGGGTAACTGTTCAAGAAAGTCTGTTCACAAAGGCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp ACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGATTGTCTTCTTAGGACACTGAACAGTTaGGGCCCCAGCGACCTGGAG +
Preference number: 4 (lower is better)
Translates to: THSSRHSVLIFQVMDCLLRTLNS*GPSDLE
Trigger: CTCCAGGTCGCTGGGGCCCCAACTGTTCAGTGTCCT...AAGAAGACAATCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp ATCCGACTTTATTGGACACCCAAGATAACCTTGTTAGATAATAAGACAGGCATGATACCACTGATGTGGTaGCAGGGCCCCCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: IRLYWTPKITLLDNKTGMIPLMW*QGPLLC
Trigger: GCACAGCAGGGGGCCCTGCCACCACATCAGTGGTAT...CATGCCTGTCTTATTATCTAACAAGGTTATCTTGGGTGTCCAATAAAGTCGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CCA 90 bp ACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGATTGTCTTCTTCAGATACCACTGATGTaGTGGCAGGGCCCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: THSSRHSVLIFQVMDCLLQIPLM*WQGPLL
Trigger: CAGCAGGGGGCCCTGCCACCACATCAGTGGTATCTG...AAGAAGACAATCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp CTACCACTAAGCTACATTCCCAGCCCTGTGACCATTTTCTTAAAACAGCATCTTCTCTGCTCCCAGAGCTaGACTGATCTTGGTGTAGGG +
Preference number: 4 (lower is better)
Translates to: LPLSYIPSPVTIFLKQHLLCSQS*TDLGVG
Trigger: CCCTACACCAAGATCAGTCCAGCTCTGGGAGCAGAG...AAGATGCTGTTTTAAGAAAATGGTCACAGGGCTGGGAATGTAGCTTAGTGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp TGGACACCCAAGATAACCTTGTTAGATAATAAGACAGGCATGAGTCAACAGGCATGCTGGTCATCCTCATaGCTGGGGTGTAGGAGACTC +
Preference number: 4 (lower is better)
Translates to: WTPKITLLDNKTGMSQQACWSSS*LGCRRL
Trigger: GAGTCTCCTACACCCCAGCCATGAGGATGACCAGCA...TGCCTGTTGACTCATGCCTGTCTTATTATCTAACAAGGTTATCTTGGGTGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CCA 90 bp GCCTTGGTGGGAGGGAAGAAAGTTCTATTTAACTTGTTGGGGAGAAAAACTGTGGCAGGTGAGGATGGGTaGGTCCTTAATTGTGGCGTA +
Preference number: 4 (lower is better)
Translates to: ALVGGKKVLFNLLGRKTVAGEDG*VLNCGV
Trigger: TACGCCACAATTAAGGACCCACCCATCCTCACCTGC...CACAGTTTTTCTCCCCAACAAGTTAAATAGAACTTTCTTCCCTCCCACCAAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
CDS-3UTR CCA 90 bp CCAGGTGAAGGAACTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCATCCTGGAAGGGCCCATaGGCAGGGCTCTGTCTTACT +
Preference number: 4 (lower is better)
Translates to: PGEGTNNTQLKAFCTDISSWKGP*AGLCLT
Trigger: AGTAAGACAGAGCCCTGCCCATGGGCCCTTCCAGGA...TGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAGTTCCTTCACCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp TGCCCTTTCCCTTCTCTGTATAGCCTGACTGAACTATGTTACTTGAAATGTTGTTCCTGGAAGGGCCCATaGGCAGGGCTCTGTCTTACT +
Preference number: 4 (lower is better)
Translates to: CPFPSLYSLTELCYLKCCSWKGP*AGLCLT
Trigger: AGTAAGACAGAGCCCTGCCCATGGGCCCTTCCAGGA...ACAACATTTCAAGTAACATAGTTCAGTCAGGCTATACAGAGAAGGGAAAGGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp CTTCCCATCCGACTTTATTGGACACCCAAGATAACCTTGTTAGATAATAAGACACACACACCTCTCCCATaGAGCCTGGAGCACAAGTGC +
Preference number: 4 (lower is better)
Translates to: LPIRLYWTPKITLLDNKTHTPLP*SLEHKC
Trigger: GCACTTGTGCTCCAGGCTTCATGGGAGAGGTGTGTG...TGTCTTATTATCTAACAAGGTTATCTTGGGTGTCCAATAAAGTCGGATGGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR TCA 90 bp ACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGATTGTCTTCTTCACACACCTCTCCCATaGAGCCTGGAGCACAAGTGC +
Preference number: 4 (lower is better)
Translates to: THSSRHSVLIFQVMDCLLHTPLP*SLEHKC
Trigger: GCACTTGTGCTCCAGGCTTCATGGGAGAGGTGTGTG...AAGAAGACAATCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp CTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGATTGTACTCACAGATACCACTaGTGTGGTGGCAGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: LITHSSRHSVLIFQVMDCTHRYH*CGGRAP
Trigger: GGGGGCCCTGCCACCACATCAGTGGTATCTGTGAGT...ACAATCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp GGAACTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGAAGATGGGCAGGCCTGTaGGCAGTCCTTGCCAATCCA +
Preference number: 4 (lower is better)
Translates to: GTNNTQLKAFCTDISSHGRWAGL*AVLANP
Trigger: TGGATTGGCAAGGACTGCTCACAGGCCTGCCCATCT...TCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
CDS-3UTR TCA 90 bp GCAGATCTTTCCAAATTGACTATAGAATGCACAGCGCACATGTTGAGGCTGACCCACTCACATAGCTGCTaGCACCCATATCCAAAGGTT +
Preference number: 4 (lower is better)
Translates to: ADLSKLTIECTAHMLRLTHSHSC*HPYPKV
Trigger: AACCTTTGGATATGGGTGTCAGCAGCTATGTGAGTG...GGTCAGCCTCAACATGTGCGCTGTGCATTCTATAGTCAATTTGGAAAGATCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp CCAGGTGAAGGAACTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCATCAGCTCATCCATCATaGGGGCAGCTTGGTCACACC +
Preference number: 4 (lower is better)
Translates to: PGEGTNNTQLKAFCTDISSAHPS*GQLGHT
Trigger: GGTGTGACCAAGCTGCCCTCATGATGGATGAGCTGA...TGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAGTTCCTTCACCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp TTACCTATTGTTACCTGTGCAGTGGAAGTTATGGACTTCTCTGGACAGGAGATTCTCCCAGAGCTGGACTaGTCTTGGTGTAGGGATTCA +
Preference number: 4 (lower is better)
Translates to: LPIVTCAVEVMDFSGQEILPELD*SWCRDS
Trigger: TGAATCCCTACACCAAGATCAGTCCAGCTCTGGGAG...AATCTCCTGTCCAGAGAAGTCCATAACTTCCACTGCACAGGTAACAATAGGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp GACTTTCTTGAACAGTTACCCCAGTCCCGTTTGGAAGTGTTTCTTTCAATCCAGCTTCTTGGACCACACTaGCTGTGGGCTCAACTTCAT +
Preference number: 4 (lower is better)
Translates to: DFLEQLPQSRLEVFLSIQLLGPH*LWAQLH
Trigger: ATGAAGTTGAGCCCACAGTCAGTGTGGTCCAAGAAG...CTGGATTGAAAGAAACACTTCCAAACGGGACTGGGGTAACTGTTCAAGAAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp ATTTGCCTTTGTGAACAGACTTTCTTGAACAGTTACCCCAGTCCCGTTTGGAAGAGAGCAAGAGCAGCTTaGAGAAGGAAGACAAGGAGG +
Preference number: 4 (lower is better)
Translates to: ICLCEQTFLNSYPSPVWKRARAA*RRKTRR
Trigger: CCTCCTTGTCTTCCTTCTGCAAGCTGCTCTTGCTCT...CTTCCAAACGGGACTGGGGTAACTGTTCAAGAAAGTCTGTTCACAAAGGCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp GCTGGGTACTTTGTGCAGAGTGTAGTTGGCAAGAGAGAAGTGAGGTTTGGAATTCTGATCAAAGGGGTGTaGATAAGACTCCTGCACAGT +
Preference number: 4 (lower is better)
Translates to: AGYFVQSVVGKREVRFGILIKGV*IRLLHS
Trigger: ACTGTGCAGGAGTCTTATGCACACCCCTTTGATCAG...AATTCCAAACCTCACTTCTCTCTTGCCAACTACACTCTGCACAAAGTACCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp ATACCAATTCCCTTAGATACTGAAACAGATGTTGAGGATAACAACAATCAACAGGGGACCATAGGTCCCTaGAGCACAGGGGACGGCACA +
Preference number: 4 (lower is better)
Translates to: IPIPLDTETDVEDNNNQQGTIGP*STGDGT
Trigger: TGTGCCGTCCCCTGTGCTGCAGGGACCTATGGTCCC...CTGTTGATTGTTGTTATCCTCAACATCTGTTTCAGTATCTAAGGGAATTGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp TGGAAGTTATGGACTTCTCTGGACAGGAGATTAAAAGCACCAACTAATGGAATAACCCATCAAAGGGGCTaGAGGCAGCTCCATTGGCAC +
Preference number: 4 (lower is better)
Translates to: WKLWTSLDRRLKAPTNGITHQRG*RQLHWH
Trigger: GTGCCAATGGAGCTGCCTGCAGCCCCTTTGATGGGT...TATTCCATTAGTTGGTGCTTTTAATCTCCTGTCCAGAGAAGTCCATAACTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp TTCTTGAACTTTGACTTGGCAAAATTTGGTAAGGCTGGCATAGAAATCATTCTACCAGCCAGCCTGGGGTaGAGGCACAGGACCCATCAA +
Preference number: 4 (lower is better)
Translates to: FLNFDLAKFGKAGIEIILPASLG*RHRTHQ
Trigger: TTGATGGGTCCTGTGCCTGCACCCCAGGCTGGCTGG...TAGAATGATTTCTATGCCAGCCTTACCAAATTTTGCCAAGTCAAAGTTCAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp ATTTGCCTTTGTGAACAGACTTTCTTGAACAGTTACCCCAGTCCCGTTTGGAAGAGTCGCAATGCTCACTaGAGTTCAGCCCAAAAGTGC +
Preference number: 4 (lower is better)
Translates to: ICLCEQTFLNSYPSPVWKSRNAH*SSAQKC
Trigger: GCACTTTTGGGCTGAACTGCAGTGAGCATTGCGACT...CTTCCAAACGGGACTGGGGTAACTGTTCAAGAAAGTCTGTTCACAAAGGCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp GGAACTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGATGCTATCACAGCGGATaGCTGTCCATCCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GTNNTQLKAFCTDISSHGCYHSG*LSILPG
Trigger: GCCTGGCAGGATGGACAGGCATCCGCTGTGATAGCA...TCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp ATCCGACTTTATTGGACACCCAAGATAACCTTGTTAGATAATAAGACAGGCATGTGCTATCACAGCGGATaGCTGTCCATCCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: IRLYWTPKITLLDNKTGMCYHSG*LSILPG
Trigger: GCCTGGCAGGATGGACAGGCATCCGCTGTGATAGCA...CATGCCTGTCTTATTATCTAACAAGGTTATCTTGGGTGTCCAATAAAGTCGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR GCA 90 bp ATACCAATTCCCTTAGATACTGAAACAGATGTTGAGGATAACAACAATCAACAGCGGCCTTTCTCTTTCTaGCGCCTCCGTCGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: IPIPLDTETDVEDNNNQQRPFSF*RLRRQA
Trigger: TGCCTGGCGACGGAGGCGGCAGAAAGAGAAAGGCCG...CTGTTGATTGTTGTTATCCTCAACATCTGTTTCAGTATCTAAGGGAATTGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp GCAGATCTTTCCAAATTGACTATAGAATGCACAGCGCACATGTTGAGGCTGACCAGCACTGGGCATGGCTaGTACTTTGAGACAAATCTG +
Preference number: 4 (lower is better)
Translates to: ADLSKLTIECTAHMLRLTSTGHG*YFETNL
Trigger: CAGATTTGTCTCAAAGTAGCAGCCATGCCCAGTGCT...GGTCAGCCTCAACATGTGCGCTGTGCATTCTATAGTCAATTTGGAAAGATCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp ACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGATTGTCTTCTTGTAGGGGGTCCAGCCTaGTGTGTCTCTGTCAAGGGA +
Preference number: 4 (lower is better)
Translates to: THSSRHSVLIFQVMDCLLVGGPA*CVSVKG
Trigger: TCCCTTGACAGAGACACAGCAGGCTGGACCCCCTAC...AAGAAGACAATCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp ATTTGCCTTTGTGAACAGACTTTCTTGAACAGTTACCCCAGTCCCGTTTGGAAGAGTGGCTACACACATTaGGGTCTTCAGGGTTCAGAG +
Preference number: 4 (lower is better)
Translates to: ICLCEQTFLNSYPSPVWKSGYTH*GLQGSE
Trigger: CTCTGAACCCTGAAGACCCCAATGTGTGTAGCCACT...CTTCCAAACGGGACTGGGGTAACTGTTCAAGAAAGTCTGTTCACAAAGGCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp CCAGGTGAAGGAACTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCATGGCAGGGACAGTCCTaGCTACAGTTCTGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: PGEGTNNTQLKAFCTDISWQGQS*LQFWPK
Trigger: CTTTGGCCAGAACTGTAGCCAGGACTGTCCCTGCCA...TGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAGTTCCTTCACCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp TGCCCTTTCCCTTCTCTGTATAGCCTGACTGAACTATGTTACTTGAAATGTTGTTGGCAGGGACAGTCCTaGCTACAGTTCTGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: CPFPSLYSLTELCYLKCCWQGQS*LQFWPK
Trigger: CTTTGGCCAGAACTGTAGCCAGGACTGTCCCTGCCA...ACAACATTTCAAGTAACATAGTTCAGTCAGGCTATACAGAGAAGGGAAAGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp AAGGAACTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGCACTGGCCTCCATGGTaGCAGGGACAGTCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: KELITHSSRHSVLIFQVMHWPPW*QGQSWL
Trigger: TAGCCAGGACTGTCCCTGCCACCATGGAGGCCAGTG...CATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAGTTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp GGCATACCAAATGAACAGAGACCAAGATTAATATTAGAACAGTTCATGCCCACAGTCACATGGTCACACTaGCCTCCATGGTGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GIPNEQRPRLILEQFMPTVTWSH*PPWWQG
Trigger: TCCCTGCCACCATGGAGGCCAGTGTGACCATGTGAC...TGTGGGCATGAACTGTTCTAATATTAATCTTGGTCTCTGTTCATTTGGTATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp TCTGTTTTGCCTACTATTACTGATAGGGCAGAAGAAAGTGAACCTGTCTTGATTGTCACATGGTCACACTaGCCTCCATGGTGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: SVLPTITDRAEESEPVLIVTWSH*PPWWQG
Trigger: TCCCTGCCACCATGGAGGCCAGTGTGACCATGTGAC...AATCAAGACAGGTTCACTTTCTTCTGCCCTATCAGTAATAGTAGGCAAAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp GCTTCACCTGTAGACTTCCTAGAGGAATGGTCCACCTTGTATGTAGTTCCTGTGACAAGCTCCAGTAACTaGATGGCAGCTGATAGTGTT +
Preference number: 4 (lower is better)
Translates to: ASPVDFLEEWSTLYVVPVTSSSN*MAADSV
Trigger: AACACTATCAGCTGCCATCCAGTTACTGGAGCTTGT...CACAGGAACTACATACAAGGTGGACCATTCCTCTAGGAAGTCTACAGGTGAAGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CCA 90 bp ATTCCCTTAGATACTGAAACAGATGTTGAGGATAACAACAATCAACAGCACATAGCAGGAGCCATCCACTaGGGAACAGGTGCCGCCGTT +
Preference number: 4 (lower is better)
Translates to: IPLDTETDVEDNNNQQHIAGAIH*GTGAAV
Trigger: AACGGCGGCACCTGTTCCCCAGTGGATGGCTCCTGC...TATGTGCTGTTGATTGTTGTTATCCTCAACATCTGTTTCAGTATCTAAGGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp TGGACACCCAAGATAACCTTGTTAGATAATAAGACAGGCATGAGTCAACAGGCATCACAGCCATCAGCATaGCTGCAGTCGCAATGCTCA +
Preference number: 4 (lower is better)
Translates to: WTPKITLLDNKTGMSQQASQPSA*LQSQCS
Trigger: TGAGCATTGCGACTGCAGCCATGCTGATGGCTGTGA...TGCCTGTTGACTCATGCCTGTCTTATTATCTAACAAGGTTATCTTGGGTGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CCA 90 bp CTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGATTGTATACCACTGATGTGGTaGCAGGGCCCCCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: LITHSSRHSVLIFQVMDCIPLMW*QGPLLC
Trigger: GCACAGCAGGGGGCCCTGCCACCACATCAGTGGTAT...ACAATCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp CTTTCTGTTTTGCCTACTATTACTGATAGGGCAGAAGAAAGTGAACCTGTCTTGGGCTCCAGAGAATCCTaGCAGGCACTCACAGATACC +
Preference number: 4 (lower is better)
Translates to: LSVLPTITDRAEESEPVLGSRES*QALTDT
Trigger: GGTATCTGTGAGTGCCTGCCAGGATTCTCTGGAGCC...CAAGACAGGTTCACTTTCTTCTGCCCTATCAGTAATAGTAGGCAAAACAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp CCAGGTGAAGGAACTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAGGCTCCAGAGAATCCTaGCAGGCACTCACAGATACC +
Preference number: 4 (lower is better)
Translates to: PGEGTNNTQLKAFCTDISGSRES*QALTDT
Trigger: GGTATCTGTGAGTGCCTGCCAGGATTCTCTGGAGCC...TGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAGTTCCTTCACCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp CTATTGTTACCTGTGCAGTGGAAGTTATGGACTTCTCTGGACAGGAGATTAAAAGGCTCCAGAGAATCCTaGCAGGCACTCACAGATACC +
Preference number: 4 (lower is better)
Translates to: LLLPVQWKLWTSLDRRLKGSRES*QALTDT
Trigger: GGTATCTGTGAGTGCCTGCCAGGATTCTCTGGAGCC...TTTTAATCTCCTGTCCAGAGAAGTCCATAACTTCCACTGCACAGGTAACAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp CTTTCTGTTTTGCCTACTATTACTGATAGGGCAGAAGAAAGTGAACCTGTCTTGCTCTGCTCCCAGAGCTaGACTGATCTTGGTGTAGGG +
Preference number: 4 (lower is better)
Translates to: LSVLPTITDRAEESEPVLLCSQS*TDLGVG
Trigger: CCCTACACCAAGATCAGTCCAGCTCTGGGAGCAGAG...CAAGACAGGTTCACTTTCTTCTGCCCTATCAGTAATAGTAGGCAAAACAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp CTTTCTGTTTTGCCTACTATTACTGATAGGGCAGAAGAAAGTGAACCTGTCTTGGAGAGTAGTCTGTGCTaGTCATCCTCATGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LSVLPTITDRAEESEPVLESSLC*SSSWLG
Trigger: CCCCAGCCATGAGGATGACCAGCACAGACTACTCTC...CAAGACAGGTTCACTTTCTTCTGCCCTATCAGTAATAGTAGGCAAAACAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp CTATTGTTACCTGTGCAGTGGAAGTTATGGACTTCTCTGGACAGGAGATTAAAAGAGAGTAGTCTGTGCTaGTCATCCTCATGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LLLPVQWKLWTSLDRRLKESSLC*SSSWLG
Trigger: CCCCAGCCATGAGGATGACCAGCACAGACTACTCTC...TTTTAATCTCCTGTCCAGAGAAGTCCATAACTTCCACTGCACAGGTAACAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp GACTTTCTTGAACAGTTACCCCAGTCCCGTTTGGAAGTGTTTCTTTCAATCCAGTCCAGGGCACTGATCTaGAAATGGGAGTCTAACACG +
Preference number: 4 (lower is better)
Translates to: DFLEQLPQSRLEVFLSIQSRALI*KWESNT
Trigger: CGTGTTAGACTCCCATTTCCAGATCAGTGCCCTGGA...CTGGATTGAAAGAAACACTTCCAAACGGGACTGGGGTAACTGTTCAAGAAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR CAA 72 bp GCAATGCAGCCAGGCCAGGATTGGCATTCGTTATTCTaGAACTTTGACTTGGCAAAATTTGGTAAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: AMQPGQDWHSLF*NFDLAKFGKAG
Trigger: GCCAGCCTTACCAAATTTTGCCAAGTCAAAGTTCAAGAATAACGAATGCCAATCCTGGCCTGGCTGCATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp GCTGGGTACTTTGTGCAGAGTGTAGTTGGCAAGAGAGAAGTGAGGTTTGGAATTACAGCTACATACAGATaGACAGTTGGGACCATAGGT +
Preference number: 4 (lower is better)
Translates to: AGYFVQSVVGKREVRFGITATYR*TVGTIG
Trigger: ACCTATGGTCCCAACTGTTCATCTGTATGTAGCTGT...AATTCCAAACCTCACTTCTCTCTTGCCAACTACACTCTGCACAAAGTACCCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp GCTGGGTACTTTGTGCAGAGTGTAGTTGGCAAGAGAGAAGTGAGGTTTGGAATTCTCCATTGGCACAGATaGAAGTCTCATTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: AGYFVQSVVGKREVRFGILHWHR*KSHCSS
Trigger: TGAACTGCAATGAGACTTGCATCTGTGCCAATGGAG...AATTCCAAACCTCACTTCTCTCTTGCCAACTACACTCTGCACAAAGTACCCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp CAGTGGAAGTTATGGACTTCTCTGGACAGGAGATTAAAAGCACCAACTAATGGAAGTCGCAATGCTCACTaGAGTTCAGCCCAAAAGTGC +
Preference number: 4 (lower is better)
Translates to: QWKLWTSLDRRLKAPTNGSRNAH*SSAQKC
Trigger: GCACTTTTGGGCTGAACTGCAGTGAGCATTGCGACT...TCCATTAGTTGGTGCTTTTAATCTCCTGTCCAGAGAAGTCCATAACTTCCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp GGCATACCAAATGAACAGAGACCAAGATTAATATTAGAACAGTTCATGCCCACAAGCCATCAGCATGGCTaGAGTCGCAATGCTCACTGC +
Preference number: 4 (lower is better)
Translates to: GIPNEQRPRLILEQFMPTSHQHG*SRNAHC
Trigger: GCAGTGAGCATTGCGACTGCAGCCATGCTGATGGCT...TGTGGGCATGAACTGTTCTAATATTAATCTTGGTCTCTGTTCATTTGGTATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp GGAACTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGAAGCCATCAGCATGGCTaGAGTCGCAATGCTCACTGC +
Preference number: 4 (lower is better)
Translates to: GTNNTQLKAFCTDISSHGSHQHG*SRNAHC
Trigger: GCAGTGAGCATTGCGACTGCAGCCATGCTGATGGCT...TCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp AAGGAACTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGTGCTATCACAGCGGATaGCTGTCCATCCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: KELITHSSRHSVLIFQVMCYHSG*LSILPG
Trigger: GCCTGGCAGGATGGACAGGCATCCGCTGTGATAGCA...CATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAGTTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp TTAAGAACATGGGATGGCACAAAGGTGACCATTAACTTCCAACTTGTCCCTTCTCAGCACACACTTGGTTaGACAAGGCTCCAGAGAATC +
Preference number: 4 (lower is better)
Translates to: LRTWDGTKVTINFQLVPSQHTLG*TRLQRI
Trigger: GATTCTCTGGAGCCTTGTGCAACCAAGTGTGTGCTG...AGAAGGGACAAGTTGGAAGTTAATGGTCACCTTTGTGCCATCCCATGTTCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp CTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGATTGTCCTGTGAGCAGTCCTTaGCAATCCACCCAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: LITHSSRHSVLIFQVMDCPVSSP*QSTQGS
Trigger: GCTTCCCTGGGTGGATTGGCAAGGACTGCTCACAGG...ACAATCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp ATACCAATTCCCTTAGATACTGAAACAGATGTTGAGGATAACAACAATCAACAGACAGCACCCACTGAGTaGCGCTCTGCTCCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: IPIPLDTETDVEDNNNQQTAPTE*RSAPRA
Trigger: AGCTCTGGGAGCAGAGCGGCACTCAGTGGGTGCTGT...CTGTTGATTGTTGTTATCCTCAACATCTGTTTCAGTATCTAAGGGAATTGGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp CTTAGCTATGTGAAGGCTGCTGCTGTCACCATACTTAATCACATCTTTGCCCTTCGTAAGGGTTTTCACTaGTGTTCAAGGAGCAAGTGC +
Preference number: 4 (lower is better)
Translates to: LSYVKAAAVTILNHIFALRKGFH*CSRSKC
Trigger: GCACTTGCTCCTTGAACAGCAGTGAAAACCCTTACG...AAGGGCAAAGATGTGATTAAGTATGGTGACAGCAGCAGCCTTCACATAGCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp TCTGTTTTGCCTACTATTACTGATAGGGCAGAAGAAAGTGAACCTGTCTTGATTTGGCAGGGACAGTCCTaGCTACAGTTCTGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: SVLPTITDRAEESEPVLIWQGQS*LQFWPK
Trigger: CTTTGGCCAGAACTGTAGCCAGGACTGTCCCTGCCA...AATCAAGACAGGTTCACTTTCTTCTGCCCTATCAGTAATAGTAGGCAAAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp TTCTTGAACTTTGACTTGGCAAAATTTGGTAAGGCTGGCATAGAAATCATTCTACACTGGCCTCCATGGTaGCAGGGACAGTCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: FLNFDLAKFGKAGIEIILHWPPW*QGQSWL
Trigger: TAGCCAGGACTGTCCCTGCCACCATGGAGGCCAGTG...TAGAATGATTTCTATGCCAGCCTTACCAAATTTTGCCAAGTCAAAGTTCAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp CCAGGTGAAGGAACTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCACATTGTCCAGTCACATaGTCACACTGGCCTCCATGG +
Preference number: 4 (lower is better)
Translates to: PGEGTNNTQLKAFCTDISHCPVT*SHWPPW
Trigger: CCATGGAGGCCAGTGTGACCATGTGACTGGACAATG...TGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAGTTCCTTCACCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp TCTGTTTTGCCTACTATTACTGATAGGGCAGAAGAAAGTGAACCTGTCTTGATTCCAGACCAGCCTGGTTaGCAGGTACAAGCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: SVLPTITDRAEESEPVLIPDQPG*QVQAPV
Trigger: TACTGGAGCTTGTACCTGCCAACCAGGCTGGTCTGG...AATCAAGACAGGTTCACTTTCTTCTGCCCTATCAGTAATAGTAGGCAAAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp GGCATACCAAATGAACAGAGACCAAGATTAATATTAGAACAGTTCATGCCCACACCAGACCAGCCTGGTTaGCAGGTACAAGCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: GIPNEQRPRLILEQFMPTPDQPG*QVQAPV
Trigger: TACTGGAGCTTGTACCTGCCAACCAGGCTGGTCTGG...TGTGGGCATGAACTGTTCTAATATTAATCTTGGTCTCTGTTCATTTGGTATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp GCCTTGGTGGGAGGGAAGAAAGTTCTATTTAACTTGTTGGGGAGAAAAACTGTGATACAGATGAACAGTTaGGACCATAGGTCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: ALVGGKKVLFNLLGRKTVIQMNS*DHRSLQ
Trigger: CTGCAGGGACCTATGGTCCCAACTGTTCATCTGTAT...CACAGTTTTTCTCCCCAACAAGTTAAATAGAACTTTCTTCCCTCCCACCAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
CDS-3UTR CCA 90 bp GACTTTCTTGAACAGTTACCCCAGTCCCGTTTGGAAGTGTTTCTTTCAATCCAGATACAGATGAACAGTTaGGACCATAGGTCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: DFLEQLPQSRLEVFLSIQIQMNS*DHRSLQ
Trigger: CTGCAGGGACCTATGGTCCCAACTGTTCATCTGTAT...CTGGATTGAAAGAAACACTTCCAAACGGGACTGGGGTAACTGTTCAAGAAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp CTATTGTTACCTGTGCAGTGGAAGTTATGGACTTCTCTGGACAGGAGATTAAAATCACAGCCATCAGCATaGCTGCAGTCGCAATGCTCA +
Preference number: 4 (lower is better)
Translates to: LLLPVQWKLWTSLDRRLKSQPSA*LQSQCS
Trigger: TGAGCATTGCGACTGCAGCCATGCTGATGGCTGTGA...TTTTAATCTCCTGTCCAGAGAAGTCCATAACTTCCACTGCACAGGTAACAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp CTTTATTGGACACCCAAGATAACCTTGTTAGATAATAAGACAGGCATGAGTCAAGACAGGAGCCATCGATaGGGCTGCAGGTCCCATTGT +
Preference number: 4 (lower is better)
Translates to: LYWTPKITLLDNKTGMSQDRSHR*GCRSHC
Trigger: ACAATGGGACCTGCAGCCCCATCGATGGCTCCTGTC...TTGACTCATGCCTGTCTTATTATCTAACAAGGTTATCTTGGGTGTCCAATAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CCA 90 bp ATACTGAAACAGATGTTGAGGATAACAACAATCAACAGCACATACACATTTCAGCAGCTCGCCCCGTTGTaGCAGCTGCATGTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: ILKQMLRITTINSTYTFQQLAPL*QLHVWK
Trigger: CTTCCACACATGCAGCTGCCACAACGGGGCGAGCTG...CTGAAATGTGTATGTGCTGTTGATTGTTGTTATCCTCAACATCTGTTTCAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
CDS-3UTR CCA 90 bp CTTCCCATCCGACTTTATTGGACACCCAAGATAACCTTGTTAGATAATAAGACACTCTGCTCCCAGAGCTaGACTGATCTTGGTGTAGGG +
Preference number: 4 (lower is better)
Translates to: LPIRLYWTPKITLLDNKTLCSQS*TDLGVG
Trigger: CCCTACACCAAGATCAGTCCAGCTCTGGGAGCAGAG...TGTCTTATTATCTAACAAGGTTATCTTGGGTGTCCAATAAAGTCGGATGGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CCA 90 bp GGAACTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGATGCTGGTCATCCTCATaGCTGGGGTGTAGGAGACTC +
Preference number: 4 (lower is better)
Translates to: GTNNTQLKAFCTDISSHGCWSSS*LGCRRL
Trigger: GAGTCTCCTACACCCCAGCCATGAGGATGACCAGCA...TCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp ACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGATTGTCTTCTTGAGAGTAGTCTGTGCTaGTCATCCTCATGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: THSSRHSVLIFQVMDCLLESSLC*SSSWLG
Trigger: CCCCAGCCATGAGGATGACCAGCACAGACTACTCTC...AAGAAGACAATCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp CTATTGTTACCTGTGCAGTGGAAGTTATGGACTTCTCTGGACAGGAGATTAAAATGTGGTAGCTGGCATTaGAAAAGCACTGGGCATGGC +
Preference number: 4 (lower is better)
Translates to: LLLPVQWKLWTSLDRRLKCGSWH*KSTGHG
Trigger: GCCATGCCCAGTGCTTTTCCAATGCCAGCTACCACA...TTTTAATCTCCTGTCCAGAGAAGTCCATAACTTCCACTGCACAGGTAACAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp TACTGTTTCTATTTTATAAGGCTTTTGGGAGCGTTCACTATTGCTGATGGCTCGCCAGTGTGTGGTAGCTaGCATTGGAAAAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: YCFYFIRLLGAFTIADGSPVCGS*HWKSTG
Trigger: CCCAGTGCTTTTCCAATGCCAGCTACCACACACTGG...CGAGCCATCAGCAATAGTGAACGCTCCCAAAAGCCTTATAAAATAGAAACAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp ATCCGACTTTATTGGACACCCAAGATAACCTTGTTAGATAATAAGACAGGCATGGAGTGTGGCTCAGCATaGCGGCTGAGGTGTCTAAGT +
Preference number: 4 (lower is better)
Translates to: IRLYWTPKITLLDNKTGMECGSA*RLRCLS
Trigger: ACTTAGACACCTCAGCCGCCATGCTGAGCCACACTC...CATGCCTGTCTTATTATCTAACAAGGTTATCTTGGGTGTCCAATAAAGTCGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
3UTR CAA 72 bp GAGAGAAGTGAGGTTTGGAATTTGCATGATTGCAGTTaGCCAGGTAGCAGTTATTGTACATGCAGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: ERSEVWNLHDCS*PGSSYCTCRVG
Trigger: CCCTACCCTGCATGTACAATAACTGCTACCTGGCAAACTGCAATCATGCAAATTCCAAACCTCACTTCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp CTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGATTGTTGGCAGTCACAGCGTTaGGAGCACAGGAAACCGAAC +
Preference number: 4 (lower is better)
Translates to: LITHSSRHSVLIFQVMDCWQSQR*EHRKPN
Trigger: GTTCGGTTTCCTGTGCTCTCAACGCTGTGACTGCCA...ACAATCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp CTTCCCATCCGACTTTATTGGACACCCAAGATAACCTTGTTAGATAATAAGACAGTGGCTGGTGAACATTaGCCTCCATTGTGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: LPIRLYWTPKITLLDNKTVAGEH*PPLWQS
Trigger: TGACTGCCACAATGGAGGTCAATGTTCACCAGCCAC...TGTCTTATTATCTAACAAGGTTATCTTGGGTGTCCAATAAAGTCGGATGGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR TCA 90 bp GGCATACCAAATGAACAGAGACCAAGATTAATATTAGAACAGTTCATGCCCACAGTGGCTGGTGAACATTaGCCTCCATTGTGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: GIPNEQRPRLILEQFMPTVAGEH*PPLWQS
Trigger: TGACTGCCACAATGGAGGTCAATGTTCACCAGCCAC...TGTGGGCATGAACTGTTCTAATATTAATCTTGGTCTCTGTTCATTTGGTATGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp GACTTTCTTGAACAGTTACCCCAGTCCCGTTTGGAAGTGTTTCTTTCAATCCAGACAGCTACATACAGATaGACAGTTGGGACCATAGGT +
Preference number: 4 (lower is better)
Translates to: DFLEQLPQSRLEVFLSIQTATYR*TVGTIG
Trigger: ACCTATGGTCCCAACTGTTCATCTGTATGTAGCTGT...CTGGATTGAAAGAAACACTTCCAAACGGGACTGGGGTAACTGTTCAAGAAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp ACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGATTGTCTTCTTGGTGGGCAGATTCTCTaGCATAAGGGTCCTCGAAAG +
Preference number: 4 (lower is better)
Translates to: THSSRHSVLIFQVMDCLLGGQIL*HKGPRK
Trigger: CTTTCGAGGACCCTTATGTCAGAGAATCTGCCCACC...AAGAAGACAATCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp CTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGATTGTCAGCTGGCTCCATTCTaGCACTGGCATATGTGCCCA +
Preference number: 4 (lower is better)
Translates to: LITHSSRHSVLIFQVMDCQLAPF*HWHMCP
Trigger: TGGGCACATATGCCAGTGTCAGAATGGAGCCAGCTG...ACAATCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp AAGGAACTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGAGGTGCATTTCCCAGTaGTGTGGTCACAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: KELITHSSRHSVLIFQVMRCISQ*CGHSWL
Trigger: GAGCCAGCTGTGACCACATCACTGGGAAATGCACCT...CATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAGTTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp TTAAGAACATGGGATGGCACAAAGGTGACCATTAACTTCCAACTTGTCCCTTCTGCATGGCTGCTACTTTaGGACAAATCTGAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: LRTWDGTKVTINFQLVPSAWLLL*DKSERE
Trigger: CTCTCTCTCAGATTTGTCTCAAAGTAGCAGCCATGC...AGAAGGGACAAGTTGGAAGTTAATGGTCACCTTTGTGCCATCCCATGTTCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp CTATTGTTACCTGTGCAGTGGAAGTTATGGACTTCTCTGGACAGGAGATTAAAAAGAGCAAGAGCAGCTTaGAGAAGGAAGACAAGGAGG +
Preference number: 4 (lower is better)
Translates to: LLLPVQWKLWTSLDRRLKRARAA*RRKTRR
Trigger: CCTCCTTGTCTTCCTTCTGCAAGCTGCTCTTGCTCT...TTTTAATCTCCTGTCCAGAGAAGTCCATAACTTCCACTGCACAGGTAACAATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp GAAACAACCTTAGGAAGCACAGAGTTAATAAGTGACAGAGTTCCAGAGCTCCCTCTCCATTGGCACAGATaGAAGTCTCATTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: ETTLGSTELISDRVPELPLHWHR*KSHCSS
Trigger: TGAACTGCAATGAGACTTGCATCTGTGCCAATGGAG...AGGGAGCTCTGGAACTCTGTCACTTATTAACTCTGTGCTTCCTAAGGTTGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR GCA 90 bp TGCCCTTTCCCTTCTCTGTATAGCCTGACTGAACTATGTTACTTGAAATGTTGTAGTCGCAATGCTCACTaGAGTTCAGCCCAAAAGTGC +
Preference number: 4 (lower is better)
Translates to: CPFPSLYSLTELCYLKCCSRNAH*SSAQKC
Trigger: GCACTTTTGGGCTGAACTGCAGTGAGCATTGCGACT...ACAACATTTCAAGTAACATAGTTCAGTCAGGCTATACAGAGAAGGGAAAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp ATACTGAAACAGATGTTGAGGATAACAACAATCAACAGCACATACACATTTCAGCCTGTGAGCAGTCCTTaGCAATCCACCCAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: ILKQMLRITTINSTYTFQPVSSP*QSTQGS
Trigger: GCTTCCCTGGGTGGATTGGCAAGGACTGCTCACAGG...CTGAAATGTGTATGTGCTGTTGATTGTTGTTATCCTCAACATCTGTTTCAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp ATACTGAAACAGATGTTGAGGATAACAACAATCAACAGCACATACACATTTCAGGCTGAAGGGCAACGCTaGGTGCAGAAGAGTCCAGTC +
Preference number: 4 (lower is better)
Translates to: ILKQMLRITTINSTYTFQAEGQR*VQKSPV
Trigger: GACTGGACTCTTCTGCACGCAGCGTTGCCCTTCAGC...CTGAAATGTGTATGTGCTGTTGATTGTTGTTATCCTCAACATCTGTTTCAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
CDS-3UTR GCA 90 bp CTTTTTGGCTTCACCTGTAGACTTCCTAGAGGAATGGTCCACCTTGTATGTAGTAAGTGGCATTGTTCATaGACTCACATAGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: LFGFTCRLPRGMVHLVCSKWHCS*THIAAD
Trigger: GTCAGCAGCTATGTGAGTGCATGAACAATGCCACTT...ACTACATACAAGGTGGACCATTCCTCTAGGAAGTCTACAGGTGAAGCCAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR GCA 90 bp TGGACACCCAAGATAACCTTGTTAGATAATAAGACAGGCATGAGTCAACAGGCAAGCACTGGGCATGGCTaGTACTTTGAGACAAATCTG +
Preference number: 4 (lower is better)
Translates to: WTPKITLLDNKTGMSQQASTGHG*YFETNL
Trigger: CAGATTTGTCTCAAAGTAGCAGCCATGCCCAGTGCT...TGCCTGTTGACTCATGCCTGTCTTATTATCTAACAAGGTTATCTTGGGTGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CCA 90 bp TGCCCTTTCCCTTCTCTGTATAGCCTGACTGAACTATGTTACTTGAAATGTTGTAGTGGCTACACACATTaGGGTCTTCAGGGTTCAGAG +
Preference number: 4 (lower is better)
Translates to: CPFPSLYSLTELCYLKCCSGYTH*GLQGSE
Trigger: CTCTGAACCCTGAAGACCCCAATGTGTGTAGCCACT...ACAACATTTCAAGTAACATAGTTCAGTCAGGCTATACAGAGAAGGGAAAGGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp CTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGATTGTCATTCGCCAGTGATGTaGTGGCAGGTGCCTCCATTC +
Preference number: 4 (lower is better)
Translates to: LITHSSRHSVLIFQVMDCHSPVM*WQVPPF
Trigger: GAATGGAGGCACCTGCCACCACATCACTGGCGAATG...ACAATCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp TTCTTGAACTTTGACTTGGCAAAATTTGGTAAGGCTGGCATAGAAATCATTCTAGTCACATGGTCACACTaGCCTCCATGGTGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: FLNFDLAKFGKAGIEIILVTWSH*PPWWQG
Trigger: TCCCTGCCACCATGGAGGCCAGTGTGACCATGTGAC...TAGAATGATTTCTATGCCAGCCTTACCAAATTTTGCCAAGTCAAAGTTCAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp TCTGTTTTGCCTACTATTACTGATAGGGCAGAAGAAAGTGAACCTGTCTTGATTCATTGTCCAGTCACATaGTCACACTGGCCTCCATGG +
Preference number: 4 (lower is better)
Translates to: SVLPTITDRAEESEPVLIHCPVT*SHWPPW
Trigger: CCATGGAGGCCAGTGTGACCATGTGACTGGACAATG...AATCAAGACAGGTTCACTTTCTTCTGCCCTATCAGTAATAGTAGGCAAAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp GGCATACCAAATGAACAGAGACCAAGATTAATATTAGAACAGTTCATGCCCACACATTGTCCAGTCACATaGTCACACTGGCCTCCATGG +
Preference number: 4 (lower is better)
Translates to: GIPNEQRPRLILEQFMPTHCPVT*SHWPPW
Trigger: CCATGGAGGCCAGTGTGACCATGTGACTGGACAATG...TGTGGGCATGAACTGTTCTAATATTAATCTTGGTCTCTGTTCATTTGGTATGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp CTACCACTAAGCTACATTCCCAGCCCTGTGACCATTTTCTTAAAACAGCATCTTTATCCAGCTGTACAGTaGCATTGTCCAGTCACATGG +
Preference number: 4 (lower is better)
Translates to: LPLSYIPSPVTIFLKQHLYPAVQ*HCPVTW
Trigger: CCATGTGACTGGACAATGCCACTGTACAGCTGGATA...AAGATGCTGTTTTAAGAAAATGGTCACAGGGCTGGGAATGTAGCTTAGTGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp AGAACATGGGATGGCACAAAGGTGACCATTAACTTCCAACTTGTCCCTTCTGTTACAAGCTCCAGTAACTaGATGGCAGCTGATAGTGTT +
Preference number: 4 (lower is better)
Translates to: RTWDGTKVTINFQLVPSVTSSSN*MAADSV
Trigger: AACACTATCAGCTGCCATCCAGTTACTGGAGCTTGT...AACAGAAGGGACAAGTTGGAAGTTAATGGTCACCTTTGTGCCATCCCATGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp AAAGCACCAACTAATGGAATACATATTTGCCCACTTCAGGCGGTGGGCTTTTATATACAGATGAACAGTTaGGACCATAGGTCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: KAPTNGIHICPLQAVGFYIQMNS*DHRSLQ
Trigger: CTGCAGGGACCTATGGTCCCAACTGTTCATCTGTAT...ATAAAAGCCCACCGCCTGAAGTGGGCAAATATGTATTCCATTAGTTGGTGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp CTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGATTGTTGCAGGTCCCATTGTTaGCACAGGAACAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LITHSSRHSVLIFQVMDCCRSHC*HRNRAG
Trigger: CCCAGCTCTGTTCCTGTGCCAACAATGGGACCTGCA...ACAATCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp CTTCCCATCCGACTTTATTGGACACCCAAGATAACCTTGTTAGATAATAAGACACCAGTGTGTGGTAGCTaGCATTGGAAAAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: LPIRLYWTPKITLLDNKTPVCGS*HWKSTG
Trigger: CCCAGTGCTTTTCCAATGCCAGCTACCACACACTGG...TGTCTTATTATCTAACAAGGTTATCTTGGGTGTCCAATAAAGTCGGATGGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CCA 90 bp CTTTTTGGCTTCACCTGTAGACTTCCTAGAGGAATGGTCCACCTTGTATGTAGTGCACTGATCTGGAAATaGGAGTCTAACACGTTCACA +
Preference number: 4 (lower is better)
Translates to: LFGFTCRLPRGMVHLVCSALIWK*ESNTFT
Trigger: TGTGAACGTGTTAGACTCCCATTTCCAGATCAGTGC...ACTACATACAAGGTGGACCATTCCTCTAGGAAGTCTACAGGTGAAGCCAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CCA 90 bp GGCATACCAAATGAACAGAGACCAAGATTAATATTAGAACAGTTCATGCCCACAGCAGGTGAGGATGGGTaGGTCCTTAATTGTGGCGTA +
Preference number: 4 (lower is better)
Translates to: GIPNEQRPRLILEQFMPTAGEDG*VLNCGV
Trigger: TACGCCACAATTAAGGACCCACCCATCCTCACCTGC...TGTGGGCATGAACTGTTCTAATATTAATCTTGGTCTCTGTTCATTTGGTATGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp GGAACTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGAAGGGCTCTGTCTTACTaGGAGGAGGTCATAGTGACC +
Preference number: 4 (lower is better)
Translates to: GTNNTQLKAFCTDISSHGRALSY*EEVIVT
Trigger: GGTCACTATGACCTCCTCCCAGTAAGACAGAGCCCT...TCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp TTCTTGAACTTTGACTTGGCAAAATTTGGTAAGGCTGGCATAGAAATCATTCTATGGCCTCCAGGGCACTaGTCTGGAAATGGGAGTCTA +
Preference number: 4 (lower is better)
Translates to: FLNFDLAKFGKAGIEIILWPPGH*SGNGSL
Trigger: TAGACTCCCATTTCCAGATCAGTGCCCTGGAGGCCA...TAGAATGATTTCTATGCCAGCCTTACCAAATTTTGCCAAGTCAAAGTTCAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp ATACTGAAACAGATGTTGAGGATAACAACAATCAACAGCACATACACATTTCAGTGGCCTCCAGGGCACTaGTCTGGAAATGGGAGTCTA +
Preference number: 4 (lower is better)
Translates to: ILKQMLRITTINSTYTFQWPPGH*SGNGSL
Trigger: TAGACTCCCATTTCCAGATCAGTGCCCTGGAGGCCA...CTGAAATGTGTATGTGCTGTTGATTGTTGTTATCCTCAACATCTGTTTCAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp TGGAAGTTATGGACTTCTCTGGACAGGAGATTAAAAGCACCAACTAATGGAATACTTCTTGGACCACACTaGCTGTGGGCTCAACTTCAT +
Preference number: 4 (lower is better)
Translates to: WKLWTSLDRRLKAPTNGILLGPH*LWAQLH
Trigger: ATGAAGTTGAGCCCACAGTCAGTGTGGTCCAAGAAG...TATTCCATTAGTTGGTGCTTTTAATCTCCTGTCCAGAGAAGTCCATAACTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp ACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGATTGTCTTCTTAGAGCAAGAGCAGCTTaGAGAAGGAAGACAAGGAGG +
Preference number: 4 (lower is better)
Translates to: THSSRHSVLIFQVMDCLLRARAA*RRKTRR
Trigger: CCTCCTTGTCTTCCTTCTGCAAGCTGCTCTTGCTCT...AAGAAGACAATCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp AAAGCACCAACTAATGGAATACATATTTGCCCACTTCAGGCGGTGGGCTTTTATCCAGTTGAGGATGTCTaGACATCGTGTGTAGTAGAT +
Preference number: 4 (lower is better)
Translates to: KAPTNGIHICPLQAVGFYPVEDV*TSCVVD
Trigger: ATCTACTACACACGATGTGCAGACATCCTCAACTGG...ATAAAAGCCCACCGCCTGAAGTGGGCAAATATGTATTCCATTAGTTGGTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp ATTCCCTTAGATACTGAAACAGATGTTGAGGATAACAACAATCAACAGCACATATGGCTGCAGTCGCAATaGTCACTGCAGTTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: IPLDTETDVEDNNNQQHIWLQSQ*SLQFSP
Trigger: TGGGCTGAACTGCAGTGAGCATTGCGACTGCAGCCA...TATGTGCTGTTGATTGTTGTTATCCTCAACATCTGTTTCAGTATCTAAGGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp ATACCAATTCCCTTAGATACTGAAACAGATGTTGAGGATAACAACAATCAACAGAGCCATCAGCATGGCTaGAGTCGCAATGCTCACTGC +
Preference number: 4 (lower is better)
Translates to: IPIPLDTETDVEDNNNQQSHQHG*SRNAHC
Trigger: GCAGTGAGCATTGCGACTGCAGCCATGCTGATGGCT...CTGTTGATTGTTGTTATCCTCAACATCTGTTTCAGTATCTAAGGGAATTGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp AACGGCCATTCTGATTGTTTTCGTTTTCCGCTTTGGATTTGTATTAACAGTAGTCTCCGTTCTCACAGCTaGAGGACACTGAACAGTTGG +
Preference number: 4 (lower is better)
Translates to: NGHSDCFRFPLWICINSSLRSHS*RTLNSW
Trigger: CCAACTGTTCAGTGTCCTGCAGCTGTGAGAACGGAG...ACTACTGTTAATACAAATCCAAAGCGGAAAACGAAAACAATCAGAATGGCCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
CDS-3UTR GCA 90 bp ATCCGACTTTATTGGACACCCAAGATAACCTTGTTAGATAATAAGACAGGCATGCAGCACACACTTGGTTaGACAAGGCTCCAGAGAATC +
Preference number: 4 (lower is better)
Translates to: IRLYWTPKITLLDNKTGMQHTLG*TRLQRI
Trigger: GATTCTCTGGAGCCTTGTGCAACCAAGTGTGTGCTG...CATGCCTGTCTTATTATCTAACAAGGTTATCTTGGGTGTCCAATAAAGTCGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR GCA 90 bp CTTTCTGTTTTGCCTACTATTACTGATAGGGCAGAAGAAAGTGAACCTGTCTTGAGCACTGGGCATGGCTaGTACTTTGAGACAAATCTG +
Preference number: 4 (lower is better)
Translates to: LSVLPTITDRAEESEPVLSTGHG*YFETNL
Trigger: CAGATTTGTCTCAAAGTAGCAGCCATGCCCAGTGCT...CAAGACAGGTTCACTTTCTTCTGCCCTATCAGTAATAGTAGGCAAAACAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp CCAGGTGAAGGAACTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCATATCCAGCTGTACAGTaGCATTGTCCAGTCACATGG +
Preference number: 4 (lower is better)
Translates to: PGEGTNNTQLKAFCTDISYPAVQ*HCPVTW
Trigger: CCATGTGACTGGACAATGCCACTGTACAGCTGGATA...TGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAGTTCCTTCACCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp CTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGATTGTTCACAGCCATCAGCATaGCTGCAGTCGCAATGCTCA +
Preference number: 4 (lower is better)
Translates to: LITHSSRHSVLIFQVMDCSQPSA*LQSQCS
Trigger: TGAGCATTGCGACTGCAGCCATGCTGATGGCTGTGA...ACAATCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp ATACCAATTCCCTTAGATACTGAAACAGATGTTGAGGATAACAACAATCAACAGCCTCCAGCACACACTTaGTTGCACAAGGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: IPIPLDTETDVEDNNNQQPPAHT*LHKAPE
Trigger: CTCTGGAGCCTTGTGCAACCAAGTGTGTGCTGGAGG...CTGTTGATTGTTGTTATCCTCAACATCTGTTTCAGTATCTAAGGGAATTGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp CTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGATTGTCATCTCTGTTCACAGTaGCGGCCAGAGAAGCCTGTT +
Preference number: 4 (lower is better)
Translates to: LITHSSRHSVLIFQVMDCHLCSQ*RPEKPV
Trigger: AACAGGCTTCTCTGGCCGCCACTGTGAACAGAGATG...ACAATCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp AAGGAACTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGCATCTCTGTTCACAGTaGCGGCCAGAGAAGCCTGTT +
Preference number: 4 (lower is better)
Translates to: KELITHSSRHSVLIFQVMHLCSQ*RPEKPV
Trigger: AACAGGCTTCTCTGGCCGCCACTGTGAACAGAGATG...CATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAGTTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp CTTTCTGTTTTGCCTACTATTACTGATAGGGCAGAAGAAAGTGAACCTGTCTTGATCATGAGGGCAGCTTaGTCACACCTGATTCCTTTG +
Preference number: 4 (lower is better)
Translates to: LSVLPTITDRAEESEPVLIMRAA*SHLIPL
Trigger: CAAAGGAATCAGGTGTGACCAAGCTGCCCTCATGAT...CAAGACAGGTTCACTTTCTTCTGCCCTATCAGTAATAGTAGGCAAAACAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp CCAGGTGAAGGAACTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAATCATGAGGGCAGCTTaGTCACACCTGATTCCTTTG +
Preference number: 4 (lower is better)
Translates to: PGEGTNNTQLKAFCTDISIMRAA*SHLIPL
Trigger: CAAAGGAATCAGGTGTGACCAAGCTGCCCTCATGAT...TGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAGTTCCTTCACCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp AAGGAACTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGTGTGGTAGCTGGCATTaGAAAAGCACTGGGCATGGC +
Preference number: 4 (lower is better)
Translates to: KELITHSSRHSVLIFQVMCGSWH*KSTGHG
Trigger: GCCATGCCCAGTGCTTTTCCAATGCCAGCTACCACA...CATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAGTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp ATCCGACTTTATTGGACACCCAAGATAACCTTGTTAGATAATAAGACAGGCATGTCCAGGGCACTGATCTaGAAATGGGAGTCTAACACG +
Preference number: 4 (lower is better)
Translates to: IRLYWTPKITLLDNKTGMSRALI*KWESNT
Trigger: CGTGTTAGACTCCCATTTCCAGATCAGTGCCCTGGA...CATGCCTGTCTTATTATCTAACAAGGTTATCTTGGGTGTCCAATAAAGTCGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CCA 90 bp AAGGAACTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGCAGGTGAGGATGGGTaGGTCCTTAATTGTGGCGTA +
Preference number: 4 (lower is better)
Translates to: KELITHSSRHSVLIFQVMAGEDG*VLNCGV
Trigger: TACGCCACAATTAAGGACCCACCCATCCTCACCTGC...CATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAGTTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp GATAGGATTTGCCTTTGTGAACAGACTTTCTTGAACAGTTACCCCAGTCCCGTTTACATAACTGCTTTCTaGAAGCTTGCAGGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: DRICLCEQTFLNSYPSPVYITAF*KLAGED
Trigger: ATCCTCACCTGCAAGCTTCCAGAAAGCAGTTATGTA...AACGGGACTGGGGTAACTGTTCAAGAAAGTCTGTTCACAAAGGCAAATCCTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp AAAGCACCAACTAATGGAATACATATTTGCCCACTTCAGGCGGTGGGCTTTTATGATTCTGGATATAGCTaGAGTTATGACCTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: KAPTNGIHICPLQAVGFYDSGYS*SYDLGL
Trigger: AAGGCCGAGGTCATAACTCCAGCTATATCCAGAATC...ATAAAAGCCCACCGCCTGAAGTGGGCAAATATGTATTCCATTAGTTGGTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164113.8
3UTR CAA 72 bp CTTCCCATCCGACTTTATTGGACACCCAAGATAACCTaGTTAGATAATAAGACAGGCATGAGTCAACAGGCA +
Preference number: 4 (lower is better)
Translates to: LPIRLYWTPKIT*LDNKTGMSQQA
Trigger: TGCCTGTTGACTCATGCCTGTCTTATTATCTAACAAGGTTATCTTGGGTGTCCAATAAAGTCGGATGGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR TCA 90 bp ATTCCCTTAGATACTGAAACAGATGTTGAGGATAACAACAATCAACAGCACATAGTGGCTGGTGAACATTaGCCTCCATTGTGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: IPLDTETDVEDNNNQQHIVAGEH*PPLWQS
Trigger: TGACTGCCACAATGGAGGTCAATGTTCACCAGCCAC...TATGTGCTGTTGATTGTTGTTATCCTCAACATCTGTTTCAGTATCTAAGGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp GGAACTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGACACTCACATAGCTGCTaGCACCCATATCCAAAGGTT +
Preference number: 4 (lower is better)
Translates to: GTNNTQLKAFCTDISSHGHSHSC*HPYPKV
Trigger: AACCTTTGGATATGGGTGTCAGCAGCTATGTGAGTG...TCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp ATCCGACTTTATTGGACACCCAAGATAACCTTGTTAGATAATAAGACAGGCATGCACTCACATAGCTGCTaGCACCCATATCCAAAGGTT +
Preference number: 4 (lower is better)
Translates to: IRLYWTPKITLLDNKTGMHSHSC*HPYPKV
Trigger: AACCTTTGGATATGGGTGTCAGCAGCTATGTGAGTG...CATGCCTGTCTTATTATCTAACAAGGTTATCTTGGGTGTCCAATAAAGTCGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR GCA 90 bp CTTTCTGTTTTGCCTACTATTACTGATAGGGCAGAAGAAAGTGAACCTGTCTTGCCAGTTGAGGATGTCTaGACATCGTGTGTAGTAGAT +
Preference number: 4 (lower is better)
Translates to: LSVLPTITDRAEESEPVLPVEDV*TSCVVD
Trigger: ATCTACTACACACGATGTGCAGACATCCTCAACTGG...CAAGACAGGTTCACTTTCTTCTGCCCTATCAGTAATAGTAGGCAAAACAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp CCAGGTGAAGGAACTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCACTCCATTGGCACAGATaGAAGTCTCATTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: PGEGTNNTQLKAFCTDISLHWHR*KSHCSS
Trigger: TGAACTGCAATGAGACTTGCATCTGTGCCAATGGAG...TGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAGTTCCTTCACCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp CTTTATTGGACACCCAAGATAACCTTGTTAGATAATAAGACAGGCATGAGTCAAAGTCGCAATGCTCACTaGAGTTCAGCCCAAAAGTGC +
Preference number: 4 (lower is better)
Translates to: LYWTPKITLLDNKTGMSQSRNAH*SSAQKC
Trigger: GCACTTTTGGGCTGAACTGCAGTGAGCATTGCGACT...TTGACTCATGCCTGTCTTATTATCTAACAAGGTTATCTTGGGTGTCCAATAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR GCA 90 bp ATACTGAAACAGATGTTGAGGATAACAACAATCAACAGCACATACACATTTCAGCTCCGTTCTCACAGCTaGAGGACACTGAACAGTTGG +
Preference number: 4 (lower is better)
Translates to: ILKQMLRITTINSTYTFQLRSHS*RTLNSW
Trigger: CCAACTGTTCAGTGTCCTGCAGCTGTGAGAACGGAG...CTGAAATGTGTATGTGCTGTTGATTGTTGTTATCCTCAACATCTGTTTCAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp TACTGTTTCTATTTTATAAGGCTTTTGGGAGCGTTCACTATTGCTGATGGCTCGAAGTGGCATTGTTCATaGACTCACATAGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: YCFYFIRLLGAFTIADGSKWHCS*THIAAD
Trigger: GTCAGCAGCTATGTGAGTGCATGAACAATGCCACTT...CGAGCCATCAGCAATAGTGAACGCTCCCAAAAGCCTTATAAAATAGAAACAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp CTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGATTGTAGAGAGAGTAGTCTGTaGTGGTCATCCTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: LITHSSRHSVLIFQVMDCRESSL*WSSSWL
Trigger: CAGCCATGAGGATGACCAGCACAGACTACTCTCTCT...ACAATCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp ATACTGAAACAGATGTTGAGGATAACAACAATCAACAGCACATACACATTTCAGTGTCCATTCCACAAGTaGCTGGTGAGTGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: ILKQMLRITTINSTYTFQCPFHK*LVSVAQ
Trigger: CTGAGCCACACTCACCAGGCACTTGTGGAATGGACA...CTGAAATGTGTATGTGCTGTTGATTGTTGTTATCCTCAACATCTGTTTCAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp GGCATACCAAATGAACAGAGACCAAGATTAATATTAGAACAGTTCATGCCCACACGTAAGGGTTTTCACTaGTGTTCAAGGAGCAAGTGC +
Preference number: 4 (lower is better)
Translates to: GIPNEQRPRLILEQFMPTRKGFH*CSRSKC
Trigger: GCACTTGCTCCTTGAACAGCAGTGAAAACCCTTACG...TGTGGGCATGAACTGTTCTAATATTAATCTTGGTCTCTGTTCATTTGGTATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp CTTAGCTATGTGAAGGCTGCTGCTGTCACCATACTTAATCACATCTTTGCCCTTTCATTTCTACATAACTaGTTTCTGGAAGCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: LSYVKAAAVTILNHIFALSFLHN*FLEACR
Trigger: CCTGCAAGCTTCCAGAAAGCAGTTATGTAGAAATGA...AAGGGCAAAGATGTGATTAAGTATGGTGACAGCAGCAGCCTTCACATAGCTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp AAGGAACTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGAGTGGCTACACACATTaGGGTCTTCAGGGTTCAGAG +
Preference number: 4 (lower is better)
Translates to: KELITHSSRHSVLIFQVMSGYTH*GLQGSE
Trigger: CTCTGAACCCTGAAGACCCCAATGTGTGTAGCCACT...CATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAGTTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp ACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGATTGTCTTCTTTATCCAGCTGTACAGTaGCATTGTCCAGTCACATGG +
Preference number: 4 (lower is better)
Translates to: THSSRHSVLIFQVMDCLLYPAVQ*HCPVTW
Trigger: CCATGTGACTGGACAATGCCACTGTACAGCTGGATA...AAGAAGACAATCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp TTCTTGAACTTTGACTTGGCAAAATTTGGTAAGGCTGGCATAGAAATCATTCTACATCTCTGTTCACAGTaGCGGCCAGAGAAGCCTGTT +
Preference number: 4 (lower is better)
Translates to: FLNFDLAKFGKAGIEIILHLCSQ*RPEKPV
Trigger: AACAGGCTTCTCTGGCCGCCACTGTGAACAGAGATG...TAGAATGATTTCTATGCCAGCCTTACCAAATTTTGCCAAGTCAAAGTTCAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR CAA 72 bp GCCTTGGTGGGAGGGAAGAAAGTTCTATTTAACTTGTaGGGGAGAAAAACTGTGGGTATATGTATACATCTG +
Preference number: 4 (lower is better)
Translates to: ALVGGKKVLFNL*GRKTVGICIHL
Trigger: CAGATGTATACATATACCCACAGTTTTTCTCCCCAACAAGTTAAATAGAACTTTCTTCCCTCCCACCAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
3UTR CAA 72 bp AACTTGTCCCTTCTGTTCTTAATTCTTGTGAAGAATTaGGGGATTAACCATTCAGAGTTGTCCAAGCCTCCG +
Preference number: 4 (lower is better)
Translates to: NLSLLFLILVKN*GINHSELSKPP
Trigger: CGGAGGCTTGGACAACTCTGAATGGTTAATCCCCAAATTCTTCACAAGAATTAAGAACAGAAGGGACAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR TCA 90 bp GGCATACCAAATGAACAGAGACCAAGATTAATATTAGAACAGTTCATGCCCACAACAGCTACATACAGATaGACAGTTGGGACCATAGGT +
Preference number: 4 (lower is better)
Translates to: GIPNEQRPRLILEQFMPTTATYR*TVGTIG
Trigger: ACCTATGGTCCCAACTGTTCATCTGTATGTAGCTGT...TGTGGGCATGAACTGTTCTAATATTAATCTTGGTCTCTGTTCATTTGGTATGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp CTTCCCATCCGACTTTATTGGACACCCAAGATAACCTTGTTAGATAATAAGACACCAGTTGAGGATGTCTaGACATCGTGTGTAGTAGAT +
Preference number: 4 (lower is better)
Translates to: LPIRLYWTPKITLLDNKTPVEDV*TSCVVD
Trigger: ATCTACTACACACGATGTGCAGACATCCTCAACTGG...TGTCTTATTATCTAACAAGGTTATCTTGGGTGTCCAATAAAGTCGGATGGGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR GCA 90 bp ATTCCCTTAGATACTGAAACAGATGTTGAGGATAACAACAATCAACAGCACATACAGCACACACTTGGTTaGACAAGGCTCCAGAGAATC +
Preference number: 4 (lower is better)
Translates to: IPLDTETDVEDNNNQQHIQHTLG*TRLQRI
Trigger: GATTCTCTGGAGCCTTGTGCAACCAAGTGTGTGCTG...TATGTGCTGTTGATTGTTGTTATCCTCAACATCTGTTTCAGTATCTAAGGGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp GGCATACCAAATGAACAGAGACCAAGATTAATATTAGAACAGTTCATGCCCACAAAGTGGCATTGTTCATaGACTCACATAGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: GIPNEQRPRLILEQFMPTKWHCS*THIAAD
Trigger: GTCAGCAGCTATGTGAGTGCATGAACAATGCCACTT...TGTGGGCATGAACTGTTCTAATATTAATCTTGGTCTCTGTTCATTTGGTATGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp ATTCCCTTAGATACTGAAACAGATGTTGAGGATAACAACAATCAACAGCACATAAGAGAGAGTAGTCTGTaGTGGTCATCCTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: IPLDTETDVEDNNNQQHIRESSL*WSSSWL
Trigger: CAGCCATGAGGATGACCAGCACAGACTACTCTCTCT...TATGTGCTGTTGATTGTTGTTATCCTCAACATCTGTTTCAGTATCTAAGGGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp GGAACTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGAACAAGCTCCAGTAACTaGATGGCAGCTGATAGTGTT +
Preference number: 4 (lower is better)
Translates to: GTNNTQLKAFCTDISSHGTSSSN*MAADSV
Trigger: AACACTATCAGCTGCCATCCAGTTACTGGAGCTTGT...TCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAGTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp CTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGATTGTATCATGAGGGCAGCTTaGTCACACCTGATTCCTTTG +
Preference number: 4 (lower is better)
Translates to: LITHSSRHSVLIFQVMDCIMRAA*SHLIPL
Trigger: CAAAGGAATCAGGTGTGACCAAGCTGCCCTCATGAT...ACAATCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp TGGAAGTTATGGACTTCTCTGGACAGGAGATTAAAAGCACCAACTAATGGAATAGCACTGATCTGGAAATaGGAGTCTAACACGTTCACA +
Preference number: 4 (lower is better)
Translates to: WKLWTSLDRRLKAPTNGIALIWK*ESNTFT
Trigger: TGTGAACGTGTTAGACTCCCATTTCCAGATCAGTGC...TATTCCATTAGTTGGTGCTTTTAATCTCCTGTCCAGAGAAGTCCATAACTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp TTCTTGAACTTTGACTTGGCAAAATTTGGTAAGGCTGGCATAGAAATCATTCTATCCAGGGCACTGATCTaGAAATGGGAGTCTAACACG +
Preference number: 4 (lower is better)
Translates to: FLNFDLAKFGKAGIEIILSRALI*KWESNT
Trigger: CGTGTTAGACTCCCATTTCCAGATCAGTGCCCTGGA...TAGAATGATTTCTATGCCAGCCTTACCAAATTTTGCCAAGTCAAAGTTCAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp CTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGATTGTCCAGTTGAGGATGTCTaGACATCGTGTGTAGTAGAT +
Preference number: 4 (lower is better)
Translates to: LITHSSRHSVLIFQVMDCPVEDV*TSCVVD
Trigger: ATCTACTACACACGATGTGCAGACATCCTCAACTGG...ACAATCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp TCTGTTTTGCCTACTATTACTGATAGGGCAGAAGAAAGTGAACCTGTCTTGATTTACATAACTGCTTTCTaGAAGCTTGCAGGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: SVLPTITDRAEESEPVLIYITAF*KLAGED
Trigger: ATCCTCACCTGCAAGCTTCCAGAAAGCAGTTATGTA...AATCAAGACAGGTTCACTTTCTTCTGCCCTATCAGTAATAGTAGGCAAAACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
3UTR CAA 72 bp ACCAATATTTCCTACTGTTTCTATTTTATAAGGCTTTaGGGAGCGTTCACTATTGCTGATGGCTCGCTTCCA +
Preference number: 4 (lower is better)
Translates to: TNISYCFYFIRL*GAFTIADGSLP
Trigger: TGGAAGCGAGCCATCAGCAATAGTGAACGCTCCCAAAAGCCTTATAAAATAGAAACAGTAGGAAATATTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp ATACCAATTCCCTTAGATACTGAAACAGATGTTGAGGATAACAACAATCAACAGAAGTGGCATTGTTCATaGACTCACATAGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: IPIPLDTETDVEDNNNQQKWHCS*THIAAD
Trigger: GTCAGCAGCTATGTGAGTGCATGAACAATGCCACTT...CTGTTGATTGTTGTTATCCTCAACATCTGTTTCAGTATCTAAGGGAATTGGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp ATACTGAAACAGATGTTGAGGATAACAACAATCAACAGCACATACACATTTCAGACAAGCTCCAGTAACTaGATGGCAGCTGATAGTGTT +
Preference number: 4 (lower is better)
Translates to: ILKQMLRITTINSTYTFQTSSSN*MAADSV
Trigger: AACACTATCAGCTGCCATCCAGTTACTGGAGCTTGT...CTGAAATGTGTATGTGCTGTTGATTGTTGTTATCCTCAACATCTGTTTCAGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp TTCTTGAACTTTGACTTGGCAAAATTTGGTAAGGCTGGCATAGAAATCATTCTAGCACTGATCTGGAAATaGGAGTCTAACACGTTCACA +
Preference number: 4 (lower is better)
Translates to: FLNFDLAKFGKAGIEIILALIWK*ESNTFT
Trigger: TGTGAACGTGTTAGACTCCCATTTCCAGATCAGTGC...TAGAATGATTTCTATGCCAGCCTTACCAAATTTTGCCAAGTCAAAGTTCAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp ATACCAATTCCCTTAGATACTGAAACAGATGTTGAGGATAACAACAATCAACAGGATTCTGGATATAGCTaGAGTTATGACCTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: IPIPLDTETDVEDNNNQQDSGYS*SYDLGL
Trigger: AAGGCCGAGGTCATAACTCCAGCTATATCCAGAATC...CTGTTGATTGTTGTTATCCTCAACATCTGTTTCAGTATCTAAGGGAATTGGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118485.8
ENSMUST00000164113.8
3UTR CAA 72 bp GCCCATAAACAAGTCAAGGAACTCCGACTAAGTAACTaGAGTGATCTAATTATGTTGTTGGGGAAACTTCAT +
Preference number: 4 (lower is better)
Translates to: AHKQVKELRLSN*SDLIMLLGKLH
Trigger: ATGAAGTTTCCCCAACAACATAATTAGATCACTCAAGTTACTTAGTCGGAGTTCCTTGACTTGTTTATGGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp AAGGAACTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGTCATTTCTACATAACTaGTTTCTGGAAGCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: KELITHSSRHSVLIFQVMSFLHN*FLEACR
Trigger: CCTGCAAGCTTCCAGAAAGCAGTTATGTAGAAATGA...CATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAGTTCCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CCA 90 bp ATTCCCTTAGATACTGAAACAGATGTTGAGGATAACAACAATCAACAGCACATATACATAACTGCTTTCTaGAAGCTTGCAGGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: IPLDTETDVEDNNNQQHIYITAF*KLAGED
Trigger: ATCCTCACCTGCAAGCTTCCAGAAAGCAGTTATGTA...TATGTGCTGTTGATTGTTGTTATCCTCAACATCTGTTTCAGTATCTAAGGGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR GCA 90 bp ATTCCCTTAGATACTGAAACAGATGTTGAGGATAACAACAATCAACAGCACATATCATTTCTACATAACTaGTTTCTGGAAGCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: IPLDTETDVEDNNNQQHISFLHN*FLEACR
Trigger: CCTGCAAGCTTCCAGAAAGCAGTTATGTAGAAATGA...TATGTGCTGTTGATTGTTGTTATCCTCAACATCTGTTTCAGTATCTAAGGGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS CCA 90 bp TGTAGCCAGGAGCGCAGAGGCACTCGCCAGTGCGCGGGTCACAGCTaGCGCCATGGTGGCACTGACAGAGCAGCTGGCAGCCCTTGCCGT +
Preference number: 5 (lower is better)
Translates to: CSQERRGTRQCAGHS*RHGGTDRAAGSPCR
Trigger: ACGGCAAGGGCTGCCAGCTGCTCTGTCAGTGCCACCATGGCGCCAGCTGTGACCCGCGCACTGGCGAGTGCCTCTGCGCTCCTGGCTACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS CCA 90 bp CCATCCTCGGCGCTGCAGCTCGCCCCGTTGTGGCAGCTGCATGTGTaGAAGCAGGCAGAGCCCCAGAACCCAGATGGGCAGGCCTGTGAG +
Preference number: 5 (lower is better)
Translates to: PSSALQLAPLWQLHV*KQAEPQNPDGQACE
Trigger: CTCACAGGCCTGCCCATCTGGGTTCTGGGGCTCTGCCTGCTTCCACACATGCAGCTGCCACAACGGGGCGAGCTGCAGCGCCGAGGATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
CDS GCA 90 bp CACAGCTGGCGCCATGGTGGCACTGACAGAGCAGCTGGCAGCCCTTaGCGTGAGTACCAGGAGCGCAGAGTTCCTCACAGCGCCAGCCTC +
Preference number: 5 (lower is better)
Translates to: HSWRHGGTDRAAGSP*REYQERRVPHSASL
Trigger: GAGGCTGGCGCTGTGAGGAACTCTGCGCTCCTGGTACTCACGGCAAGGGCTGCCAGCTGCTCTGTCAGTGCCACCATGGCGCCAGCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS CCA 90 bp GCTCCAGAGAATCCTGGCAGGCACTCACAGATACCACTGATGTGGTaGCAGGGCCCCCTGCTGTGCACGCAGAGGGGACAAGGCTGGGCG +
Preference number: 5 (lower is better)
Translates to: APENPGRHSQIPLMW*QGPLLCTQRGQGWA
Trigger: CGCCCAGCCTTGTCCCCTCTGCGTGCACAGCAGGGGGCCCTGCCACCACATCAGTGGTATCTGTGAGTGCCTGCCAGGATTCTCTGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS GCA 90 bp GGCAGTCAGCACCGTTCTGGCAGGTGCAGGGTAGCTGGCAACCGTTaGCATAGTAGCCGGCGGGGCAGGACTCATTGCAGTAGTGGCCAG +
Preference number: 5 (lower is better)
Translates to: GSQHRSGRCRVAGNR*HSSRRGRTHCSSGQ
Trigger: CTGGCCACTACTGCAATGAGTCCTGCCCCGCCGGCTACTATGGCAACGGTTGCCAGCTACCCTGCACCTGCCAGAACGGTGCTGACTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS GCA 90 bp AGGCAGAGCCCCAGAACCCAGATGGGCAGGCCTGTGAGCAGTCCTTaGCAATCCACCCAGGGAAGCACTGACAGGAGCCATCGATGGGGC +
Preference number: 5 (lower is better)
Translates to: RQSPRTQMGRPVSSP*QSTQGSTDRSHRWG
Trigger: GCCCCATCGATGGCTCCTGTCAGTGCTTCCCTGGGTGGATTGGCAAGGACTGCTCACAGGCCTGCCCATCTGGGTTCTGGGGCTCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
CDS CCA 90 bp CCAGTCACATGGTCACACTGGCCTCCATGGTGGCAGGGACAGTCCTaGCTACAGTTCTGGCCAAAGGTCCCTGGAGGGCAGGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: PVTWSHWPPWWQGQS*LQFWPKVPGGQGWA
Trigger: TGCCCAGCCCTGCCCTCCAGGGACCTTTGGCCAGAACTGTAGCCAGGACTGTCCCTGCCACCATGGAGGCCAGTGTGACCATGTGACTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS CCA 90 bp GGTCCCTGCAGCACAGGGGACGGCACACACCTCTCCCATGAAGCCTaGAGCACAAGTGCAGCTCCCGGTGATACTGTGGCAGTCAGCACC +
Preference number: 5 (lower is better)
Translates to: GPCSTGDGTHLSHEA*STSAAPGDTVAVST
Trigger: GGTGCTGACTGCCACAGTATCACCGGGAGCTGCACTTGTGCTCCAGGCTTCATGGGAGAGGTGTGTGCCGTCCCCTGTGCTGCAGGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000124881.2
ENSMUST00000164113.8
CDS GCA 90 bp GTAGCTGGCAACCGTTGCCATAGTAGCCGGCGGGGCAGGACTCATTaGAGTAGTGGCCAGACCAGCCTGGTTGGCAGGTACAAGCTCCAG +
Preference number: 5 (lower is better)
Translates to: VAGNRCHSSRRGRTH*SSGQTSLVGRYKLQ
Trigger: CTGGAGCTTGTACCTGCCAACCAGGCTGGTCTGGCCACTACTGCAATGAGTCCTGCCCCGCCGGCTACTATGGCAACGGTTGCCAGCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS CCA 90 bp TCTCCCATGAAGCCTGGAGCACAAGTGCAGCTCCCGGTGATACTGTaGCAGTCAGCACCGTTCTGGCAGGTGCAGGGTAGCTGGCAACCG +
Preference number: 5 (lower is better)
Translates to: SPMKPGAQVQLPVIL*QSAPFWQVQGSWQP
Trigger: CGGTTGCCAGCTACCCTGCACCTGCCAGAACGGTGCTGACTGCCACAGTATCACCGGGAGCTGCACTTGTGCTCCAGGCTTCATGGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS TCA 90 bp CACCACCAGGAACAACAGGAGAACGATGCCGGTGACAGCACCCACTaGGTGCCGCTCTGCTCCCAGAGCTGGACTGATCTTGGTGTAGGG +
Preference number: 5 (lower is better)
Translates to: HHQEQQENDAGDSTH*VPLCSQSWTDLGVG
Trigger: CCCTACACCAAGATCAGTCCAGCTCTGGGAGCAGAGCGGCACTCAGTGGGTGCTGTCACCGGCATCGTTCTCCTGTTGTTCCTGGTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS GCA 90 bp CAAAGGGGCTGCAGGCAGCTCCATTGGCACAGATGCAAGTCTCATTaGAGTTCAGGCCCCAGGTCCCACTGGGACAAGGCAGGGAGCAGT +
Preference number: 5 (lower is better)
Translates to: QRGCRQLHWHRCKSH*SSGPRSHWDKAGSS
Trigger: ACTGCTCCCTGCCTTGTCCCAGTGGGACCTGGGGCCTGAACTGCAATGAGACTTGCATCTGTGCCAATGGAGCTGCCTGCAGCCCCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000124881.2
ENSMUST00000164113.8
CDS CCA 90 bp AGTCCTTGCCAATCCACCCAGGGAAGCACTGACAGGAGCCATCGATaGGGCTGCAGGTCCCATTGTTGGCACAGGAACAGAGCTGGGCAC +
Preference number: 5 (lower is better)
Translates to: SPCQSTQGSTDRSHR*GCRSHCWHRNRAGH
Trigger: GTGCCCAGCTCTGTTCCTGTGCCAACAATGGGACCTGCAGCCCCATCGATGGCTCCTGTCAGTGCTTCCCTGGGTGGATTGGCAAGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS TCA 90 bp AGGGCCCTTGTAGCCAGGCTCACACTCACAGGCCCCTGTGGCTGGTaGACATTGACCTCCATTGTGGCAGTCACAGCGTTGAGAGCACAG +
Preference number: 5 (lower is better)
Translates to: RALVARLTLTGPCGW*TLTSIVAVTALRAQ
Trigger: CTGTGCTCTCAACGCTGTGACTGCCACAATGGAGGTCAATGTTCACCAGCCACAGGGGCCTGTGAGTGTGAGCCTGGCTACAAGGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS GCA 90 bp CATCCAGGCTCACAGTGGCAGGTATCGGGAGAGACACAGCGGCCGTaGATGCACTCCTCGGTACACAGAGGAATGCAGAAGTCTCCGTTC +
Preference number: 5 (lower is better)
Translates to: HPGSQWQVSGETQRP*MHSSVHRGMQKSPF
Trigger: GAACGGAGACTTCTGCATTCCTCTGTGTACCGAGGAGTGCATGCACGGCCGCTGTGTCTCTCCCGATACCTGCCACTGTGAGCCTGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS GCA 90 bp CTCGGCAGGTGCAGGAGCCATCCACTGGGGAACAGGTGCCGCCGTTaGTACAGCTACATACAGATGAACAGTTGGGACCATAGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: LGRCRSHPLGNRCRR*YSYIQMNSWDHRSL
Trigger: CAGGGACCTATGGTCCCAACTGTTCATCTGTATGTAGCTGTAGCAACGGCGGCACCTGTTCCCCAGTGGATGGCTCCTGCACCTGCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000124881.2
ENSMUST00000164113.8
CDS GCA 90 bp GCCATCCCTCTCGGCAGGTGCAGGAGCCATCCACTGGGGAACAGGTaGCGCCGTTGCTACAGCTACATACAGATGAACAGTTGGGACCAT +
Preference number: 5 (lower is better)
Translates to: AIPLGRCRSHPLGNR*RRCYSYIQMNSWDH
Trigger: ATGGTCCCAACTGTTCATCTGTATGTAGCTGTAGCAACGGCGGCACCTGTTCCCCAGTGGATGGCTCCTGCACCTGCCGAGAGGGATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000124881.2
ENSMUST00000164113.8
CDS CCA 90 bp GTAGCCGGCGGGGCAGGACTCATTGCAGTAGTGGCCAGACCAGCCTaGTTGGCAGGTACAAGCTCCAGTAACTGGATGGCAGCTGATAGT +
Preference number: 5 (lower is better)
Translates to: VAGGAGLIAVVARPA*LAGTSSSNWMAADS
Trigger: ACTATCAGCTGCCATCCAGTTACTGGAGCTTGTACCTGCCAACCAGGCTGGTCTGGCCACTACTGCAATGAGTCCTGCCCCGCCGGCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS TCA 90 bp ATCCACTGGGGAACAGGTGCCGCCGTTGCTACAGCTACATACAGATaGACAGTTGGGACCATAGGTCCCTGCAGCACAGGGGACGGCACA +
Preference number: 5 (lower is better)
Translates to: IHWGTGAAVATATYR*TVGTIGPCSTGDGT
Trigger: TGTGCCGTCCCCTGTGCTGCAGGGACCTATGGTCCCAACTGTTCATCTGTATGTAGCTGTAGCAACGGCGGCACCTGTTCCCCAGTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000124881.2
ENSMUST00000164113.8
CDS GCA 90 bp CAGGCTCACAGTGGCAGGTATCGGGAGAGACACAGCGGCCGTGCATaGACTCCTCGGTACACAGAGGAATGCAGAAGTCTCCGTTCTCAT +
Preference number: 5 (lower is better)
Translates to: QAHSGRYRERHSGRA*TPRYTEECRSLRSH
Trigger: ATGAGAACGGAGACTTCTGCATTCCTCTGTGTACCGAGGAGTGCATGCACGGCCGCTGTGTCTCTCCCGATACCTGCCACTGTGAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS CCA 90 bp TTCCACAAGTGCCTGAGAGAGAGTAGTCTGTGCTGGTCATCCTCATaGCTGGGGTGTAGGAGACTCGGGGAGCCAGGTCACGGCCTTTCT +
Preference number: 5 (lower is better)
Translates to: FHKCLRESSLCWSSS*LGCRRLGEPGHGLS
Trigger: AGAAAGGCCGTGACCTGGCTCCCCGAGTCTCCTACACCCCAGCCATGAGGATGACCAGCACAGACTACTCTCTCTCAGGCACTTGTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118485.8
CDS-3UTR CAA 90 bp CTAAGAGAGACGCTTATCCCTCTTACTGCTTTTCCTGGAAGGGCCCATGGGCAGGGGCTGCAGGTCCCATaGTTGGCACAGGAACAGAGC +
Preference number: 5 (lower is better)
Translates to: LRETLIPLTAFPGRAHGQGLQVP*LAQEQS
Trigger: GCTCTGTTCCTGTGCCAACAATGGGACCTGCAGCCC...CTGCCCATGGGCCCTTCCAGGAAAAGCAGTAAGAGGGATAAGCGTCTCTCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
CDS-3UTR CAA 90 bp AGACATCTGTCTTGGCTTCCCTGCTCTTGGGCGCAGAGATCTCTTGAGGGTGAGGTGGCAGTCACAGCGTaGAGAGCACAGGAAACCGAA +
Preference number: 5 (lower is better)
Translates to: RHLSWLPCSWAQRSLEGEVAVTA*RAQETE
Trigger: TTCGGTTTCCTGTGCTCTCAACGCTGTGACTGCCAC...CTCACCCTCAAGAGATCTCTGCGCCCAAGAGCAGGGAAGCCAAGACAGATGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS CCA 90 bp TTTGAGACAAATCTGAGAGAGAGTAGTCTGTGCTGGTCATCCTCATaGCTGGGGTGTAGGAGACTCGGGGAGCCAGGTCACGGCCTTTCT +
Preference number: 5 (lower is better)
Translates to: FETNLRESSLCWSSS*LGCRRLGEPGHGLS
Trigger: AGAAAGGCCGTGACCTGGCTCCCCGAGTCTCCTACACCCCAGCCATGAGGATGACCAGCACAGACTACTCTCTCTCAGATTTGTCTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp GCTTCACCTGTAGACTTCCTAGAGGAATGGTCCACCTTGTATGTAGTTCCTGTGCAGGACACTGAACAGTaGGGGCCCCAGCGACCTGGA +
Preference number: 5 (lower is better)
Translates to: ASPVDFLEEWSTLYVVPVQDTEQ*GPQRPG
Trigger: TCCAGGTCGCTGGGGCCCCAACTGTTCAGTGTCCTG...CACAGGAACTACATACAAGGTGGACCATTCCTCTAGGAAGTCTACAGGTGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CAA 90 bp CAGAAAGGCAGCAGGTGCAGGGTAGTTTTCCTTGTCAGTACAATGACAGAAGGCGGGCTGCAGGTCCCATaGTTGGCACAGGAACAGAGC +
Preference number: 5 (lower is better)
Translates to: QKGSRCRVVFLVSTMTEGGLQVP*LAQEQS
Trigger: GCTCTGTTCCTGTGCCAACAATGGGACCTGCAGCCC...GCCTTCTGTCATTGTACTGACAAGGAAAACTACCCTGCACCTGCTGCCTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CAA 90 bp CAGAAAGGCAGCAGGTGCAGGGTAGTTTTCCTTGTCAGTACAATGACAGAAGGCCCCTGTGAGCAGTCCTaGCCAATCCACCCAGGGAAG +
Preference number: 5 (lower is better)
Translates to: QKGSRCRVVFLVSTMTEGPCEQS*PIHPGK
Trigger: CTTCCCTGGGTGGATTGGCAAGGACTGCTCACAGGG...GCCTTCTGTCATTGTACTGACAAGGAAAACTACCCTGCACCTGCTGCCTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CAA 90 bp ACTCAAGTATTGGGTGAACCAATGCAATGCAGCCAGGCCAGGATTGGCATTCGTCCCTGTGAGCAGTCCTaGCCAATCCACCCAGGGAAG +
Preference number: 5 (lower is better)
Translates to: TQVLGEPMQCSQARIGIRPCEQS*PIHPGK
Trigger: CTTCCCTGGGTGGATTGGCAAGGACTGCTCACAGGG...ACGAATGCCAATCCTGGCCTGGCTGCATTGCATTGGTTCACCCAATACTTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp GCTGGGTACTTTGTGCAGAGTGTAGTTGGCAAGAGAGAAGTGAGGTTTGGAATTCAGGACACTGAACAGTaGGGGCCCCAGCGACCTGGA +
Preference number: 5 (lower is better)
Translates to: AGYFVQSVVGKREVRFGIQDTEQ*GPQRPG
Trigger: TCCAGGTCGCTGGGGCCCCAACTGTTCAGTGTCCTG...AATTCCAAACCTCACTTCTCTCTTGCCAACTACACTCTGCACAAAGTACCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp GATAGGATTTGCCTTTGTGAACAGACTTTCTTGAACAGTTACCCCAGTCCCGTTCTGCAGCTCGCCCCGTaGTGGCAGCTGCATGTGTGG +
Preference number: 5 (lower is better)
Translates to: DRICLCEQTFLNSYPSPVLQLAP*WQLHVW
Trigger: CCACACATGCAGCTGCCACAACGGGGCGAGCTGCAG...AACGGGACTGGGGTAACTGTTCAAGAAAGTCTGTTCACAAAGGCAAATCCTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
CDS-3UTR CAA 90 bp GACTTTCTTGAACAGTTACCCCAGTCCCGTTTGGAAGTGTTTCTTTCAATCCAGCTGCAGCTCGCCCCGTaGTGGCAGCTGCATGTGTGG +
Preference number: 5 (lower is better)
Translates to: DFLEQLPQSRLEVFLSIQLQLAP*WQLHVW
Trigger: CCACACATGCAGCTGCCACAACGGGGCGAGCTGCAG...CTGGATTGAAAGAAACACTTCCAAACGGGACTGGGGTAACTGTTCAAGAAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
CDS-3UTR CAA 90 bp CTAGGGCCTAATCCAGGGGCTGGACTTGGTGCTTGCTTTTTGGCTTCACCTGTATCTCTGTCAAGGGACTaGTTACTGAGCTTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: LGPNPGAGLGACFLASPVSLSRD*LLSLVG
Trigger: CCCCACCAAGCTCAGTAACAAGTCCCTTGACAGAGA...TACAGGTGAAGCCAAAAAGCAAGCACCAAGTCCAGCCCCTGGATTAGGCCCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CAA 90 bp CATTTAAACCTAGGGCCTAATCCAGGGGCTGGACTTGGTGCTTGCTTTTTGGCTCGGTGCCGGGTACACTaGAACCAGTTGAGGATGTCT +
Preference number: 5 (lower is better)
Translates to: HLNLGPNPGAGLGACFLARCRVH*NQLRMS
Trigger: AGACATCCTCAACTGGTTCAAGTGTACCCGGCACCG...AGCCAAAAAGCAAGCACCAAGTCCAGCCCCTGGATTAGGCCCTAGGTTTAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CAA 90 bp CATTTAAACCTAGGGCCTAATCCAGGGGCTGGACTTGGTGCTTGCTTTTTGGCTCAGATGCAAGTCTCATaGCAGTTCAGGCCCCAGGTC +
Preference number: 5 (lower is better)
Translates to: HLNLGPNPGAGLGACFLAQMQVS*QFRPQV
Trigger: GACCTGGGGCCTGAACTGCAATGAGACTTGCATCTG...AGCCAAAAAGCAAGCACCAAGTCCAGCCCCTGGATTAGGCCCTAGGTTTAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CAA 90 bp ATTTGCCTTTGTGAACAGACTTTCTTGAACAGTTACCCCAGTCCCGTTTGGAAGCAGGACACTGAACAGTaGGGGCCCCAGCGACCTGGA +
Preference number: 5 (lower is better)
Translates to: ICLCEQTFLNSYPSPVWKQDTEQ*GPQRPG
Trigger: TCCAGGTCGCTGGGGCCCCAACTGTTCAGTGTCCTG...CTTCCAAACGGGACTGGGGTAACTGTTCAAGAAAGTCTGTTCACAAAGGCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp ACAGAGTTCCAGAGCTCCCTGCCTAGCTCACGTGTCCCAGCATTTAAACCTAGGCATCATGAGGGCAGCTaGGTCACACCTGATTCCTTT +
Preference number: 5 (lower is better)
Translates to: TEFQSSLPSSRVPAFKPRHHEGS*VTPDSF
Trigger: AAAGGAATCAGGTGTGACCAAGCTGCCCTCATGATG...CCTAGGTTTAAATGCTGGGACACGTGAGCTAGGCAGGGAGCTCTGGAACTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS TCA 90 bp GTGACGTGGTCACAAGTGGCATTGTTCATGCACTCACATAGCTGCTaGCACCCATATCCAAAGGTTCCAGGGGCACATCTCTGTTCACAG +
Preference number: 5 (lower is better)
Translates to: VTWSQVALFMHSHSC*HPYPKVPGAHLCSQ
Trigger: CTGTGAACAGAGATGTGCCCCTGGAACCTTTGGATATGGGTGTCAGCAGCTATGTGAGTGCATGAACAATGCCACTTGTGACCACGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS GCA 90 bp ACGCCAGTGTGTGGTAGCTGGCATTGGAAAAGCACTGGGCATGGCTaGTACTTTGAGACAAATCTGAGAGAGAGTAGTCTGTGCTGGTCA +
Preference number: 5 (lower is better)
Translates to: TPVCGSWHWKSTGHG*YFETNLRESSLCWS
Trigger: TGACCAGCACAGACTACTCTCTCTCAGATTTGTCTCAAAGTAGCAGCCATGCCCAGTGCTTTTCCAATGCCAGCTACCACACACTGGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp GATAGGATTTGCCTTTGTGAACAGACTTTCTTGAACAGTTACCCCAGTCCCGTTGGGCTGCAGGTCCCATaGTTGGCACAGGAACAGAGC +
Preference number: 5 (lower is better)
Translates to: DRICLCEQTFLNSYPSPVGLQVP*LAQEQS
Trigger: GCTCTGTTCCTGTGCCAACAATGGGACCTGCAGCCC...AACGGGACTGGGGTAACTGTTCAAGAAAGTCTGTTCACAAAGGCAAATCCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp GAGTGCTACACTTGGAGAGTTGTTAGAGCTCTGCTCCCACTCTGTGTCTCTCTTAGCTGTACAGTGGCATaGTCCAGTCACATGGTCACA +
Preference number: 5 (lower is better)
Translates to: ECYTWRVVRALLPLCVSLSCTVA*SSHMVT
Trigger: TGTGACCATGTGACTGGACAATGCCACTGTACAGCT...AAGAGAGACACAGAGTGGGAGCAGAGCTCTAACAACTCTCCAAGTGTAGCACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp GATAGGATTTGCCTTTGTGAACAGACTTTCTTGAACAGTTACCCCAGTCCCGTTCTGCAGGTCCCATTGTaGGCACAGGAACAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: DRICLCEQTFLNSYPSPVLQVPL*AQEQSW
Trigger: CCAGCTCTGTTCCTGTGCCAACAATGGGACCTGCAG...AACGGGACTGGGGTAACTGTTCAAGAAAGTCTGTTCACAAAGGCAAATCCTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp GAAACAACCTTAGGAAGCACAGAGTTAATAAGTGACAGAGTTCCAGAGCTCCCTCTGCAGGTCCCATTGTaGGCACAGGAACAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: ETTLGSTELISDRVPELPLQVPL*AQEQSW
Trigger: CCAGCTCTGTTCCTGTGCCAACAATGGGACCTGCAG...AGGGAGCTCTGGAACTCTGTCACTTATTAACTCTGTGCTTCCTAAGGTTGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CAA 90 bp CAGTGGAAGTTATGGACTTCTCTGGACAGGAGATTAAAAGCACCAACTAATGGAGCCTGTGAGCAGTCCTaGCCAATCCACCCAGGGAAG +
Preference number: 5 (lower is better)
Translates to: QWKLWTSLDRRLKAPTNGACEQS*PIHPGK
Trigger: CTTCCCTGGGTGGATTGGCAAGGACTGCTCACAGGC...TCCATTAGTTGGTGCTTTTAATCTCCTGTCCAGAGAAGTCCATAACTTCCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068967.11
CDS-3UTR CAA 90 bp GAGTGCTACACTTGGAGAGTTGTTAGAGCTCTGCTCCCACTCTGTGTCTCTCTTGTACACTTGAACCAGTaGAGGATGTCTGCACATCGT +
Preference number: 5 (lower is better)
Translates to: ECYTWRVVRALLPLCVSLVHLNQ*RMSAHR
Trigger: ACGATGTGCAGACATCCTCAACTGGTTCAAGTGTAC...AAGAGAGACACAGAGTGGGAGCAGAGCTCTAACAACTCTCCAAGTGTAGCACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp GATAGGATTTGCCTTTGTGAACAGACTTTCTTGAACAGTTACCCCAGTCCCGTTCGGTGCCGGGTACACTaGAACCAGTTGAGGATGTCT +
Preference number: 5 (lower is better)
Translates to: DRICLCEQTFLNSYPSPVRCRVH*NQLRMS
Trigger: AGACATCCTCAACTGGTTCAAGTGTACCCGGCACCG...AACGGGACTGGGGTAACTGTTCAAGAAAGTCTGTTCACAAAGGCAAATCCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp CTTAGCTATGTGAAGGCTGCTGCTGTCACCATACTTAATCACATCTTTGCCCTTGTGGCAGTCACAGCGTaGAGAGCACAGGAAACCGAA +
Preference number: 5 (lower is better)
Translates to: LSYVKAAAVTILNHIFALVAVTA*RAQETE
Trigger: TTCGGTTTCCTGTGCTCTCAACGCTGTGACTGCCAC...AAGGGCAAAGATGTGATTAAGTATGGTGACAGCAGCAGCCTTCACATAGCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp ATTTGCCTTTGTGAACAGACTTTCTTGAACAGTTACCCCAGTCCCGTTTGGAAGCAGATGCAAGTCTCATaGCAGTTCAGGCCCCAGGTC +
Preference number: 5 (lower is better)
Translates to: ICLCEQTFLNSYPSPVWKQMQVS*QFRPQV
Trigger: GACCTGGGGCCTGAACTGCAATGAGACTTGCATCTG...CTTCCAAACGGGACTGGGGTAACTGTTCAAGAAAGTCTGTTCACAAAGGCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp AGAACATGGGATGGCACAAAGGTGACCATTAACTTCCAACTTGTCCCTTCTGTTCTGCAGGCAGCTCCATaGGCACAGATGCAAGTCTCA +
Preference number: 5 (lower is better)
Translates to: RTWDGTKVTINFQLVPSVLQAAP*AQMQVS
Trigger: TGAGACTTGCATCTGTGCCAATGGAGCTGCCTGCAG...AACAGAAGGGACAAGTTGGAAGTTAATGGTCACCTTTGTGCCATCCCATGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp GATAGGATTTGCCTTTGTGAACAGACTTTCTTGAACAGTTACCCCAGTCCCGTTCTGCAGGCAGCTCCATaGGCACAGATGCAAGTCTCA +
Preference number: 5 (lower is better)
Translates to: DRICLCEQTFLNSYPSPVLQAAP*AQMQVS
Trigger: TGAGACTTGCATCTGTGCCAATGGAGCTGCCTGCAG...AACGGGACTGGGGTAACTGTTCAAGAAAGTCTGTTCACAAAGGCAAATCCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp ACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGATTGTCTTCTTCAGGACACTGAACAGTaGGGGCCCCAGCGACCTGGA +
Preference number: 5 (lower is better)
Translates to: THSSRHSVLIFQVMDCLLQDTEQ*GPQRPG
Trigger: TCCAGGTCGCTGGGGCCCCAACTGTTCAGTGTCCTG...AAGAAGACAATCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp GAAAGGCAGCAGGTGCAGGGTAGTTTTCCTTGTCAGTACAATGACAGAAGGCCTTGGTCACAAGTGGCATaGTTCATGCACTCACATAGC +
Preference number: 5 (lower is better)
Translates to: ERQQVQGSFPCQYNDRRPWSQVA*FMHSHS
Trigger: GCTATGTGAGTGCATGAACAATGCCACTTGTGACCA...AGGCCTTCTGTCATTGTACTGACAAGGAAAACTACCCTGCACCTGCTGCCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CAA 90 bp ACTCAAGTATTGGGTGAACCAATGCAATGCAGCCAGGCCAGGATTGGCATTCGTTGGTCACAAGTGGCATaGTTCATGCACTCACATAGC +
Preference number: 5 (lower is better)
Translates to: TQVLGEPMQCSQARIGIRWSQVA*FMHSHS
Trigger: GCTATGTGAGTGCATGAACAATGCCACTTGTGACCA...ACGAATGCCAATCCTGGCCTGGCTGCATTGCATTGGTTCACCCAATACTTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp GAAACAACCTTAGGAAGCACAGAGTTAATAAGTGACAGAGTTCCAGAGCTCCCTCAGTGGCTACACACATaGGGGTCTTCAGGGTTCAGA +
Preference number: 5 (lower is better)
Translates to: ETTLGSTELISDRVPELPQWLHT*GSSGFR
Trigger: TCTGAACCCTGAAGACCCCAATGTGTGTAGCCACTG...AGGGAGCTCTGGAACTCTGTCACTTATTAACTCTGTGCTTCCTAAGGTTGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CAA 90 bp GACTTTCTTGAACAGTTACCCCAGTCCCGTTTGGAAGTGTTTCTTTCAATCCAGCAGTGGCTACACACATaGGGGTCTTCAGGGTTCAGA +
Preference number: 5 (lower is better)
Translates to: DFLEQLPQSRLEVFLSIQQWLHT*GSSGFR
Trigger: TCTGAACCCTGAAGACCCCAATGTGTGTAGCCACTG...CTGGATTGAAAGAAACACTTCCAAACGGGACTGGGGTAACTGTTCAAGAAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp TGGACACCCAAGATAACCTTGTTAGATAATAAGACAGGCATGAGTCAACAGGCACTGCAGGCAGCTCCATaGGCACAGATGCAAGTCTCA +
Preference number: 5 (lower is better)
Translates to: WTPKITLLDNKTGMSQQALQAAP*AQMQVS
Trigger: TGAGACTTGCATCTGTGCCAATGGAGCTGCCTGCAG...TGCCTGTTGACTCATGCCTGTCTTATTATCTAACAAGGTTATCTTGGGTGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CAA 90 bp GCTGGGTACTTTGTGCAGAGTGTAGTTGGCAAGAGAGAAGTGAGGTTTGGAATTCATCATGAGGGCAGCTaGGTCACACCTGATTCCTTT +
Preference number: 5 (lower is better)
Translates to: AGYFVQSVVGKREVRFGIHHEGS*VTPDSF
Trigger: AAAGGAATCAGGTGTGACCAAGCTGCCCTCATGATG...AATTCCAAACCTCACTTCTCTCTTGCCAACTACACTCTGCACAAAGTACCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS CCA 90 bp CATTTCTACATAACTGCTTTCTGGAAGCTTGCAGGTGAGGATGGGTaGGTCCTTAATTGTGGCGTAAGGGTTTTCACTGCTGTTCAAGGA +
Preference number: 5 (lower is better)
Translates to: HFYITAFWKLAGEDG*VLNCGVRVFTAVQG
Trigger: TCCTTGAACAGCAGTGAAAACCCTTACGCCACAATTAAGGACCCACCCATCCTCACCTGCAAGCTTCCAGAAAGCAGTTATGTAGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp TTAAGAACATGGGATGGCACAAAGGTGACCATTAACTTCCAACTTGTCCCTTCTCAGTGGCTACACACATaGGGGTCTTCAGGGTTCAGA +
Preference number: 5 (lower is better)
Translates to: LRTWDGTKVTINFQLVPSQWLHT*GSSGFR
Trigger: TCTGAACCCTGAAGACCCCAATGTGTGTAGCCACTG...AGAAGGGACAAGTTGGAAGTTAATGGTCACCTTTGTGCCATCCCATGTTCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp CTACCACTAAGCTACATTCCCAGCCCTGTGACCATTTTCTTAAAACAGCATCTTCAGTGGCTACACACATaGGGGTCTTCAGGGTTCAGA +
Preference number: 5 (lower is better)
Translates to: LPLSYIPSPVTIFLKQHLQWLHT*GSSGFR
Trigger: TCTGAACCCTGAAGACCCCAATGTGTGTAGCCACTG...AAGATGCTGTTTTAAGAAAATGGTCACAGGGCTGGGAATGTAGCTTAGTGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp TACTGTTTCTATTTTATAAGGCTTTTGGGAGCGTTCACTATTGCTGATGGCTCGCGGTGCCGGGTACACTaGAACCAGTTGAGGATGTCT +
Preference number: 5 (lower is better)
Translates to: YCFYFIRLLGAFTIADGSRCRVH*NQLRMS
Trigger: AGACATCCTCAACTGGTTCAAGTGTACCCGGCACCG...CGAGCCATCAGCAATAGTGAACGCTCCCAAAAGCCTTATAAAATAGAAACAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp CCAGGTGAAGGAACTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCACTGCAGGCAGCTCCATaGGCACAGATGCAAGTCTCA +
Preference number: 5 (lower is better)
Translates to: PGEGTNNTQLKAFCTDISLQAAP*AQMQVS
Trigger: TGAGACTTGCATCTGTGCCAATGGAGCTGCCTGCAG...TGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAGTTCCTTCACCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp AAGGAACTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGCCTGTGAGCAGTCCTaGCCAATCCACCCAGGGAAG +
Preference number: 5 (lower is better)
Translates to: KELITHSSRHSVLIFQVMACEQS*PIHPGK
Trigger: CTTCCCTGGGTGGATTGGCAAGGACTGCTCACAGGC...CATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAGTTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
CDS-3UTR CAA 90 bp CTTAGCTATGTGAAGGCTGCTGCTGTCACCATACTTAATCACATCTTTGCCCTTCATCATGAGGGCAGCTaGGTCACACCTGATTCCTTT +
Preference number: 5 (lower is better)
Translates to: LSYVKAAAVTILNHIFALHHEGS*VTPDSF
Trigger: AAAGGAATCAGGTGTGACCAAGCTGCCCTCATGATG...AAGGGCAAAGATGTGATTAAGTATGGTGACAGCAGCAGCCTTCACATAGCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp AAAGCACCAACTAATGGAATACATATTTGCCCACTTCAGGCGGTGGGCTTTTATTCTCTGTCAAGGGACTaGTTACTGAGCTTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: KAPTNGIHICPLQAVGFYSLSRD*LLSLVG
Trigger: CCCCACCAAGCTCAGTAACAAGTCCCTTGACAGAGA...ATAAAAGCCCACCGCCTGAAGTGGGCAAATATGTATTCCATTAGTTGGTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp TCCCAGCATTTAAACCTAGGGCCTAATCCAGGGGCTGGACTTGGTGCTTGCTTTGCAACTTTGAAGCCTTaGTCCATAATGTATGTGTTC +
Preference number: 5 (lower is better)
Translates to: SQHLNLGPNPGAGLGACFATLKP*SIMYVF
Trigger: GAACACATACATTATGGACAAAGGCTTCAAAGTTGC...AAAGCAAGCACCAAGTCCAGCCCCTGGATTAGGCCCTAGGTTTAAATGCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CAA 90 bp TGGACACCCAAGATAACCTTGTTAGATAATAAGACAGGCATGAGTCAACAGGCAAGCTGTACAGTGGCATaGTCCAGTCACATGGTCACA +
Preference number: 5 (lower is better)
Translates to: WTPKITLLDNKTGMSQQASCTVA*SSHMVT
Trigger: TGTGACCATGTGACTGGACAATGCCACTGTACAGCT...TGCCTGTTGACTCATGCCTGTCTTATTATCTAACAAGGTTATCTTGGGTGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CAA 90 bp ATACTGAAACAGATGTTGAGGATAACAACAATCAACAGCACATACACATTTCAGGGGCTGCAGGTCCCATaGTTGGCACAGGAACAGAGC +
Preference number: 5 (lower is better)
Translates to: ILKQMLRITTINSTYTFQGLQVP*LAQEQS
Trigger: GCTCTGTTCCTGTGCCAACAATGGGACCTGCAGCCC...CTGAAATGTGTATGTGCTGTTGATTGTTGTTATCCTCAACATCTGTTTCAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp TGGAAGTTATGGACTTCTCTGGACAGGAGATTAAAAGCACCAACTAATGGAATAGACTTGTTACTGAGCTaGGTGGGGCTGTTCCTGTCC +
Preference number: 5 (lower is better)
Translates to: WKLWTSLDRRLKAPTNGIDLLLS*VGLFLS
Trigger: GGACAGGAACAGCCCCACCAAGCTCAGTAACAAGTC...TATTCCATTAGTTGGTGCTTTTAATCTCCTGTCCAGAGAAGTCCATAACTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp CTTCCCATCCGACTTTATTGGACACCCAAGATAACCTTGTTAGATAATAAGACAGACTTGTTACTGAGCTaGGTGGGGCTGTTCCTGTCC +
Preference number: 5 (lower is better)
Translates to: LPIRLYWTPKITLLDNKTDLLLS*VGLFLS
Trigger: GGACAGGAACAGCCCCACCAAGCTCAGTAACAAGTC...TGTCTTATTATCTAACAAGGTTATCTTGGGTGTCCAATAAAGTCGGATGGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS-3UTR CAA 90 bp CTATTGTTACCTGTGCAGTGGAAGTTATGGACTTCTCTGGACAGGAGATTAAAATCTCTGTCAAGGGACTaGTTACTGAGCTTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: LLLPVQWKLWTSLDRRLKSLSRD*LLSLVG
Trigger: CCCCACCAAGCTCAGTAACAAGTCCCTTGACAGAGA...TTTTAATCTCCTGTCCAGAGAAGTCCATAACTTCCACTGCACAGGTAACAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp CTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGATTGTGTGGCAGTCACAGCGTaGAGAGCACAGGAAACCGAA +
Preference number: 5 (lower is better)
Translates to: LITHSSRHSVLIFQVMDCVAVTA*RAQETE
Trigger: TTCGGTTTCCTGTGCTCTCAACGCTGTGACTGCCAC...ACAATCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp ATACCAATTCCCTTAGATACTGAAACAGATGTTGAGGATAACAACAATCAACAGCTGCAGGTCCCATTGTaGGCACAGGAACAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: IPIPLDTETDVEDNNNQQLQVPL*AQEQSW
Trigger: CCAGCTCTGTTCCTGTGCCAACAATGGGACCTGCAG...CTGTTGATTGTTGTTATCCTCAACATCTGTTTCAGTATCTAAGGGAATTGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp ATACTGAAACAGATGTTGAGGATAACAACAATCAACAGCACATACACATTTCAGCTGCAGGTCCCATTGTaGGCACAGGAACAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: ILKQMLRITTINSTYTFQLQVPL*AQEQSW
Trigger: CCAGCTCTGTTCCTGTGCCAACAATGGGACCTGCAG...CTGAAATGTGTATGTGCTGTTGATTGTTGTTATCCTCAACATCTGTTTCAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp ATACCAATTCCCTTAGATACTGAAACAGATGTTGAGGATAACAACAATCAACAGCGGTGCCGGGTACACTaGAACCAGTTGAGGATGTCT +
Preference number: 5 (lower is better)
Translates to: IPIPLDTETDVEDNNNQQRCRVH*NQLRMS
Trigger: AGACATCCTCAACTGGTTCAAGTGTACCCGGCACCG...CTGTTGATTGTTGTTATCCTCAACATCTGTTTCAGTATCTAAGGGAATTGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp ATACCAATTCCCTTAGATACTGAAACAGATGTTGAGGATAACAACAATCAACAGGTGGCAGTCACAGCGTaGAGAGCACAGGAAACCGAA +
Preference number: 5 (lower is better)
Translates to: IPIPLDTETDVEDNNNQQVAVTA*RAQETE
Trigger: TTCGGTTTCCTGTGCTCTCAACGCTGTGACTGCCAC...CTGTTGATTGTTGTTATCCTCAACATCTGTTTCAGTATCTAAGGGAATTGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp ATTCCCTTAGATACTGAAACAGATGTTGAGGATAACAACAATCAACAGCACATACAGATGCAAGTCTCATaGCAGTTCAGGCCCCAGGTC +
Preference number: 5 (lower is better)
Translates to: IPLDTETDVEDNNNQQHIQMQVS*QFRPQV
Trigger: GACCTGGGGCCTGAACTGCAATGAGACTTGCATCTG...TATGTGCTGTTGATTGTTGTTATCCTCAACATCTGTTTCAGTATCTAAGGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp TTCTTGAACTTTGACTTGGCAAAATTTGGTAAGGCTGGCATAGAAATCATTCTACAGATGCAAGTCTCATaGCAGTTCAGGCCCCAGGTC +
Preference number: 5 (lower is better)
Translates to: FLNFDLAKFGKAGIEIILQMQVS*QFRPQV
Trigger: GACCTGGGGCCTGAACTGCAATGAGACTTGCATCTG...TAGAATGATTTCTATGCCAGCCTTACCAAATTTTGCCAAGTCAAAGTTCAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp GGAACTAATAACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGACATCATGAGGGCAGCTaGGTCACACCTGATTCCTTT +
Preference number: 5 (lower is better)
Translates to: GTNNTQLKAFCTDISSHGHHEGS*VTPDSF
Trigger: AAAGGAATCAGGTGTGACCAAGCTGCCCTCATGATG...TCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGTTATTAGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp ATTCCCTTAGATACTGAAACAGATGTTGAGGATAACAACAATCAACAGCACATAGACTTGTTACTGAGCTaGGTGGGGCTGTTCCTGTCC +
Preference number: 5 (lower is better)
Translates to: IPLDTETDVEDNNNQQHIDLLLS*VGLFLS
Trigger: GGACAGGAACAGCCCCACCAAGCTCAGTAACAAGTC...TATGTGCTGTTGATTGTTGTTATCCTCAACATCTGTTTCAGTATCTAAGGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp ACACACAGCTCAAGGCATTCTGTACTGATATTTCAAGTCATGGATTGTCTTCTTTGGTCACAAGTGGCATaGTTCATGCACTCACATAGC +
Preference number: 5 (lower is better)
Translates to: THSSRHSVLIFQVMDCLLWSQVA*FMHSHS
Trigger: GCTATGTGAGTGCATGAACAATGCCACTTGTGACCA...AAGAAGACAATCCATGACTTGAAATATCAGTACAGAATGCCTTGAGCTGTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp TTCTTGAACTTTGACTTGGCAAAATTTGGTAAGGCTGGCATAGAAATCATTCTAAGCTGTACAGTGGCATaGTCCAGTCACATGGTCACA +
Preference number: 5 (lower is better)
Translates to: FLNFDLAKFGKAGIEIILSCTVA*SSHMVT
Trigger: TGTGACCATGTGACTGGACAATGCCACTGTACAGCT...TAGAATGATTTCTATGCCAGCCTTACCAAATTTTGCCAAGTCAAAGTTCAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp ATTCCCTTAGATACTGAAACAGATGTTGAGGATAACAACAATCAACAGCACATAAGCTGTACAGTGGCATaGTCCAGTCACATGGTCACA +
Preference number: 5 (lower is better)
Translates to: IPLDTETDVEDNNNQQHISCTVA*SSHMVT
Trigger: TGTGACCATGTGACTGGACAATGCCACTGTACAGCT...TATGTGCTGTTGATTGTTGTTATCCTCAACATCTGTTTCAGTATCTAAGGGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS-3UTR CAA 90 bp ATTCCCTTAGATACTGAAACAGATGTTGAGGATAACAACAATCAACAGCACATATGGTCACAAGTGGCATaGTTCATGCACTCACATAGC +
Preference number: 5 (lower is better)
Translates to: IPLDTETDVEDNNNQQHIWSQVA*FMHSHS
Trigger: GCTATGTGAGTGCATGAACAATGCCACTTGTGACCA...TATGTGCTGTTGATTGTTGTTATCCTCAACATCTGTTTCAGTATCTAAGGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS GCA 72 bp GGGAGCAGTCCAGGCCCTGCCATCCCTCTCGGCAGGTaGAGGAGCCATCCACTGGGGAACAGGTGCCGCCGT +
Preference number: 6 (lower is better)
Translates to: GSSPGPAIPLGR*RSHPLGNRCRR
Trigger: ACGGCGGCACCTGTTCCCCAGTGGATGGCTCCTGCACCTGCCGAGAGGGATGGCAGGGCCTGGACTGCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000124881.2
ENSMUST00000164113.8
CDS CCA 72 bp GAGCGCAGAGGCACTCGCCAGTGCGCGGGTCACAGCTaGCGCCATGGTGGCACTGACAGAGCAGCTGGCAGC +
Preference number: 6 (lower is better)
Translates to: ERRGTRQCAGHS*RHGGTDRAAGS
Trigger: GCTGCCAGCTGCTCTGTCAGTGCCACCATGGCGCCAGCTGTGACCCGCGCACTGGCGAGTGCCTCTGCGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS CAA 72 bp TGGCAGGCCCCATCCTCGGCGCTGCAGCTCGCCCCGTaGTGGCAGCTGCATGTGTGGAAGCAGGCAGAGCCC +
Preference number: 6 (lower is better)
Translates to: WQAPSSALQLAP*WQLHVWKQAEP
Trigger: GGGCTCTGCCTGCTTCCACACATGCAGCTGCCACAACGGGGCGAGCTGCAGCGCCGAGGATGGGGCCTGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
CDS GCA 72 bp CATCCTCGGCGCTGCAGCTCGCCCCGTTGTGGCAGCTaGATGTGTGGAAGCAGGCAGAGCCCCAGAACCCAG +
Preference number: 6 (lower is better)
Translates to: HPRRCSSPRCGS*MCGSRQSPRTQ
Trigger: CTGGGTTCTGGGGCTCTGCCTGCTTCCACACATGCAGCTGCCACAACGGGGCGAGCTGCAGCGCCGAGGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
CDS GCA 72 bp GAGACTCGGGGAGCCAGGTCACGGCCTTTCTCTTTCTaGCGCCTCCGTCGCCAGGCAAACAGGCCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: ETRGARSRPFSF*RLRRQANRPSS
Trigger: GCTGCTGGGCCTGTTTGCCTGGCGACGGAGGCGGCAGAAAGAGAAAGGCCGTGACCTGGCTCCCCGAGTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS CCA 72 bp AGTAGCCAGGGCAGCATTGGGACCTCCGCCGGTACATaGTCCGGAGGCCGCGCCTATACGCGGTCTTATAGC +
Preference number: 6 (lower is better)
Translates to: SSQGSIGTSAGT*SGGRAYTRSYS
Trigger: GCTATAAGACCGCGTATAGGCGCGGCCTCCGGACCATGTACCGGCGGAGGTCCCAATGCTGCCCTGGCTACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS GCA 72 bp CACCGTTCTGGCAGGTGCAGGGTAGCTGGCAACCGTTaGCATAGTAGCCGGCGGGGCAGGACTCATTGCAGT +
Preference number: 6 (lower is better)
Translates to: HRSGRCRVAGNR*HSSRRGRTHCS
Trigger: ACTGCAATGAGTCCTGCCCCGCCGGCTACTATGGCAACGGTTGCCAGCTACCCTGCACCTGCCAGAACGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS CCA 72 bp CTGCCATCCCTCTCGGCAGGTGCAGGAGCCATCCACTaGGGAACAGGTGCCGCCGTTGCTACAGCTACATAC +
Preference number: 6 (lower is better)
Translates to: LPSLSAGAGAIH*GTGAAVATATY
Trigger: GTATGTAGCTGTAGCAACGGCGGCACCTGTTCCCCAGTGGATGGCTCCTGCACCTGCCGAGAGGGATGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000124881.2
ENSMUST00000164113.8
CDS CAA 90 bp CAGAGGAATGCAGAAGTCTCCGTTCTCATAGTAGCCAGGGCAGCATaGGGACCTCCGCCGGTACATGGTCCGGAGGCCGCGCCTATACGC +
Preference number: 6 (lower is better)
Translates to: QRNAEVSVLIVARAA*GPPPVHGPEAAPIR
Trigger: GCGTATAGGCGCGGCCTCCGGACCATGTACCGGCGGAGGTCCCAATGCTGCCCTGGCTACTATGAGAACGGAGACTTCTGCATTCCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS CAA 90 bp ACAGCGAATGCAGAAGTCTCCGTTCTCATAGTAGCCAGGGCAGCATaGGGACCTCCGCCGGTACATGGTCCGGAGGCCGCGCCTATACGC +
Preference number: 6 (lower is better)
Translates to: TANAEVSVLIVARAA*GPPPVHGPEAAPIR
Trigger: GCGTATAGGCGCGGCCTCCGGACCATGTACCGGCGGAGGTCCCAATGCTGCCCTGGCTACTATGAGAACGGAGACTTCTGCATTCGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS GCA 72 bp TGCAGTCGCAATGCTCACTGCAGTTCAGCCCAAAAGTaGCGTCCGGGCAGGGCAGTTCACAGGAGTCCCCCA +
Preference number: 6 (lower is better)
Translates to: CSRNAHCSSAQK*RPGRAVHRSPP
Trigger: TGGGGGACTCCTGTGAACTGCCCTGCCCGGACGGCACTTTTGGGCTGAACTGCAGTGAGCATTGCGACTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000124881.2
ENSMUST00000164113.8
CDS GCA 72 bp CCCAGAACCCAGATGGGCAGGCCTGTGAGCAGTCCTTaGCAATCCACCCAGGGAAGCACTGACAGGAGCCAT +
Preference number: 6 (lower is better)
Translates to: PRTQMGRPVSSP*QSTQGSTDRSH
Trigger: ATGGCTCCTGTCAGTGCTTCCCTGGGTGGATTGGCAAGGACTGCTCACAGGCCTGCCCATCTGGGTTCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
CDS CCA 72 bp AGCACAGGGGACGGCACACACCTCTCCCATGAAGCCTaGAGCACAAGTGCAGCTCCCGGTGATACTGTGGCA +
Preference number: 6 (lower is better)
Translates to: STGDGTHLSHEA*STSAAPGDTVA
Trigger: TGCCACAGTATCACCGGGAGCTGCACTTGTGCTCCAGGCTTCATGGGAGAGGTGTGTGCCGTCCCCTGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000124881.2
ENSMUST00000164113.8
CDS CCA 72 bp AATCCTGGCAGGCACTCACAGATACCACTGATGTGGTaGCAGGGCCCCCTGCTGTGCACGCAGAGGGGACAA +
Preference number: 6 (lower is better)
Translates to: NPGRHSQIPLMW*QGPLLCTQRGQ
Trigger: TTGTCCCCTCTGCGTGCACAGCAGGGGGCCCTGCCACCACATCAGTGGTATCTGTGAGTGCCTGCCAGGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS CAA 90 bp TCAAAGGGGCTGCAGGCAGCTCCATTGGCACAGATGCAAGTCTCATaGCAGTTCAGGCCCCAGGTCCCACTGGGACAAGGCAGGGAGCAG +
Preference number: 6 (lower is better)
Translates to: SKGLQAAPLAQMQVS*QFRPQVPLGQGREQ
Trigger: CTGCTCCCTGCCTTGTCCCAGTGGGACCTGGGGCCTGAACTGCAATGAGACTTGCATCTGTGCCAATGGAGCTGCCTGCAGCCCCTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000124881.2
ENSMUST00000164113.8
CDS GCA 72 bp AGCCTGGGGTGCAGGCACAGGACCCATCAAAGGGGCTaGAGGCAGCTCCATTGGCACAGATGCAAGTCTCAT +
Preference number: 6 (lower is better)
Translates to: SLGCRHRTHQRG*RQLHWHRCKSH
Trigger: ATGAGACTTGCATCTGTGCCAATGGAGCTGCCTGCAGCCCCTTTGATGGGTCCTGTGCCTGCACCCCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000124881.2
ENSMUST00000164113.8
CDS GCA 72 bp AACAGGAGAACGATGCCGGTGACAGCACCCACTGAGTaGCGCTCTGCTCCCAGAGCTGGACTGATCTTGGTG +
Preference number: 6 (lower is better)
Translates to: NRRTMPVTAPTE*RSAPRAGLILV
Trigger: CACCAAGATCAGTCCAGCTCTGGGAGCAGAGCGGCACTCAGTGGGTGCTGTCACCGGCATCGTTCTCCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS GCA 72 bp TGCAGTGGGGACCCCAGTGCTCGCTGTCACAGCGAATaGAGAAGTCTCCGTTCTCATAGTAGCCAGGGCAGC +
Preference number: 6 (lower is better)
Translates to: CSGDPSARCHSE*RSLRSHSSQGS
Trigger: GCTGCCCTGGCTACTATGAGAACGGAGACTTCTGCATTCGCTGTGACAGCGAGCACTGGGGTCCCCACTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093829.9
CDS CCA 72 bp GGCCCTTGTAGCCAGGCTCACACTCACAGGCCCCTGTaGCTGGTGAACATTGACCTCCATTGTGGCAGTCAC +
Preference number: 6 (lower is better)
Translates to: GPCSQAHTHRPL*LVNIDLHCGSH
Trigger: GTGACTGCCACAATGGAGGTCAATGTTCACCAGCCACAGGGGCCTGTGAGTGTGAGCCTGGCTACAAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS CAA 72 bp CTGCAGGCAGCTCCATTGGCACAGATGCAAGTCTCATaGCAGTTCAGGCCCCAGGTCCCACTGGGACAAGGC +
Preference number: 6 (lower is better)
Translates to: LQAAPLAQMQVS*QFRPQVPLGQG
Trigger: GCCTTGTCCCAGTGGGACCTGGGGCCTGAACTGCAATGAGACTTGCATCTGTGCCAATGGAGCTGCCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000124881.2
ENSMUST00000164113.8
CDS GCA 72 bp AGTGGCAGGTATCGGGAGAGACACAGCGGCCGTGCATaGACTCCTCGGTACACAGAGGAATGCAGAAGTCTC +
Preference number: 6 (lower is better)
Translates to: SGRYRERHSGRA*TPRYTEECRSL
Trigger: GAGACTTCTGCATTCCTCTGTGTACCGAGGAGTGCATGCACGGCCGCTGTGTCTCTCCCGATACCTGCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS GCA 72 bp TCACAGTGGCAGGTATCGGGAGAGACACAGCGGCCGTaGATGCACTCCTCGGTACACAGAGGAATGCAGAAG +
Preference number: 6 (lower is better)
Translates to: SQWQVSGETQRP*MHSSVHRGMQK
Trigger: CTTCTGCATTCCTCTGTGTACCGAGGAGTGCATGCACGGCCGCTGTGTCTCTCCCGATACCTGCCACTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS GCA 72 bp CTCGGCAGGTGCAGGAGCCATCCACTGGGGAACAGGTaGCGCCGTTGCTACAGCTACATACAGATGAACAGT +
Preference number: 6 (lower is better)
Translates to: LGRCRSHPLGNR*RRCYSYIQMNS
Trigger: ACTGTTCATCTGTATGTAGCTGTAGCAACGGCGGCACCTGTTCCCCAGTGGATGGCTCCTGCACCTGCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000124881.2
ENSMUST00000164113.8
CDS CCA 72 bp GGGGCAGGACTCATTGCAGTAGTGGCCAGACCAGCCTaGTTGGCAGGTACAAGCTCCAGTAACTGGATGGCA +
Preference number: 6 (lower is better)
Translates to: GAGLIAVVARPA*LAGTSSSNWMA
Trigger: TGCCATCCAGTTACTGGAGCTTGTACCTGCCAACCAGGCTGGTCTGGCCACTACTGCAATGAGTCCTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS TCA 72 bp GGAACAGGTGCCGCCGTTGCTACAGCTACATACAGATaGACAGTTGGGACCATAGGTCCCTGCAGCACAGGG +
Preference number: 6 (lower is better)
Translates to: GTGAAVATATYR*TVGTIGPCSTG
Trigger: CCCTGTGCTGCAGGGACCTATGGTCCCAACTGTTCATCTGTATGTAGCTGTAGCAACGGCGGCACCTGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000124881.2
ENSMUST00000164113.8
CDS CAA 72 bp GTGCAGGAGCCATCCACTGGGGAACAGGTGCCGCCGTaGCTACAGCTACATACAGATGAACAGTTGGGACCA +
Preference number: 6 (lower is better)
Translates to: VQEPSTGEQVPP*LQLHTDEQLGP
Trigger: TGGTCCCAACTGTTCATCTGTATGTAGCTGTAGCAACGGCGGCACCTGTTCCCCAGTGGATGGCTCCTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000124881.2
ENSMUST00000164113.8
CDS GCA 72 bp TGCAGGAGCCATCCACTGGGGAACAGGTGCCGCCGTTaGTACAGCTACATACAGATGAACAGTTGGGACCAT +
Preference number: 6 (lower is better)
Translates to: CRSHPLGNRCRR*YSYIQMNSWDH
Trigger: ATGGTCCCAACTGTTCATCTGTATGTAGCTGTAGCAACGGCGGCACCTGTTCCCCAGTGGATGGCTCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000124881.2
ENSMUST00000164113.8
CDS CCA 72 bp AGACCAGCCTGGTTGGCAGGTACAAGCTCCAGTAACTaGATGGCAGCTGATAGTGTTCTCGGTGTCACAGGG +
Preference number: 6 (lower is better)
Translates to: RPAWLAGTSSSN*MAADSVLGVTG
Trigger: CCCTGTGACACCGAGAACACTATCAGCTGCCATCCAGTTACTGGAGCTTGTACCTGCCAACCAGGCTGGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS CAA 72 bp ACACCTGTCCCCCATGTATCCAGCTGTACAGTGGCATaGTCCAGTCACATGGTCACACTGGCCTCCATGGTG +
Preference number: 6 (lower is better)
Translates to: TPVPHVSSCTVA*SSHMVTLASMV
Trigger: CACCATGGAGGCCAGTGTGACCATGTGACTGGACAATGCCACTGTACAGCTGGATACATGGGGGACAGGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS CAA 90 bp TTCTTCTTGACACCTGTCCCCCATGTATCCAGCTGTACAGTGGCATaGTCCAGTCACATGGTCACACTGGCCTCCATGGTGGCAGGGACA +
Preference number: 6 (lower is better)
Translates to: FFLTPVPHVSSCTVA*SSHMVTLASMVAGT
Trigger: TGTCCCTGCCACCATGGAGGCCAGTGTGACCATGTGACTGGACAATGCCACTGTACAGCTGGATACATGGGGGACAGGTGTCAAGAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS GCA 72 bp TGTCCATTCCACAAGTGCCTGAGAGAGAGTAGTCTGTaGTGGTCATCCTCATGGCTGGGGTGTAGGAGACTC +
Preference number: 6 (lower is better)
Translates to: CPFHKCLRESSL*WSSSWLGCRRL
Trigger: GAGTCTCCTACACCCCAGCCATGAGGATGACCAGCACAGACTACTCTCTCTCAGGCACTTGTGGAATGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118485.8
CDS CAA 90 bp GCGTTGAGAGCACAGGAAACCGAACGTTCCAAAGGGACATTCTTCTaGACACCTGTCCCCCATGTATCCAGCTGTACAGTGGCATTGTCC +
Preference number: 6 (lower is better)
Translates to: ALRAQETERSKGTFF*TPVPHVSSCTVALS
Trigger: GGACAATGCCACTGTACAGCTGGATACATGGGGGACAGGTGTCAAGAAGAATGTCCCTTTGGAACGTTCGGTTTCCTGTGCTCTCAACGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS TCA 72 bp CACAGGAAACCGAACGTTCCAAAGGGACATTCTTCTTaGCACCTGTCCCCCATGTATCCAGCTGTACAGTGG +
Preference number: 6 (lower is better)
Translates to: HRKPNVPKGHSS*HLSPMYPAVQW
Trigger: CCACTGTACAGCTGGATACATGGGGGACAGGTGTCAAGAAGAATGTCCCTTTGGAACGTTCGGTTTCCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS CAA 72 bp GCACAGGAAACCGAACGTTCCAAAGGGACATTCTTCTaGACACCTGTCCCCCATGTATCCAGCTGTACAGTG +
Preference number: 6 (lower is better)
Translates to: AQETERSKGTFF*TPVPHVSSCTV
Trigger: CACTGTACAGCTGGATACATGGGGGACAGGTGTCAAGAAGAATGTCCCTTTGGAACGTTCGGTTTCCTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS TCA 72 bp TCACAAGTGGCATTGTTCATGCACTCACATAGCTGCTaGCACCCATATCCAAAGGTTCCAGGGGCACATCTC +
Preference number: 6 (lower is better)
Translates to: SQVALFMHSHSC*HPYPKVPGAHL
Trigger: GAGATGTGCCCCTGGAACCTTTGGATATGGGTGTCAGCAGCTATGTGAGTGCATGAACAATGCCACTTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000118485.8
ENSMUST00000164113.8
CDS GCA 72 bp TGTGGTAGCTGGCATTGGAAAAGCACTGGGCATGGCTaGTACTTTGAGACAAATCTGAGAGAGAGTAGTCTG +
Preference number: 6 (lower is better)
Translates to: CGSWHWKSTGHG*YFETNLRESSL
Trigger: CAGACTACTCTCTCTCAGATTTGTCTCAAAGTAGCAGCCATGCCCAGTGCTTTTCCAATGCCAGCTACCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000093829.9
ENSMUST00000164113.8
CDS CCA 72 bp ATAACTGCTTTCTGGAAGCTTGCAGGTGAGGATGGGTaGGTCCTTAATTGTGGCGTAAGGGTTTTCACTGCT +
Preference number: 6 (lower is better)
Translates to: ITAFWKLAGEDG*VLNCGVRVFTA
Trigger: AGCAGTGAAAACCCTTACGCCACAATTAAGGACCCACCCATCCTCACCTGCAAGCTTCCAGAAAGCAGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068967.11
ENSMUST00000118485.8
ENSMUST00000164113.8