Pregenerated sensors for MEF2D (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001419Ensembl transcript IDs: ENSMUST00000001455.13, ENSMUST00000107558.9, ENSMUST00000107559.3, ENSMUST00000119251.8
Found 246 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GACACAGGTGCACAAAGCCAAGAGGTGCCCTCCTCACCCTGCCCCTaGCAAGCCTCCTGCTCTCAGTGCCCCAGGGAACCAAAGGACGAC | + |
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Preference number: 1 (lower is better) Translates to: DTGAQSQEVPSSPCP*QASCSQCPREPKDD Trigger: GTCGTCCTTTGGTTCCCTGGGGCACTGAGAGCAGGAGGCTTGTCAGGGGCAGGGTGAGGAGGGCACCTCTTGGCTTTGTGCACCTGTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
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| 3UTR TCA 90 bp | GCCACACACTTGGACTCACCCAGACCCAGGAGCCAGGAGTGTGGGTaGTTGTCAAGTTTGGGGACGGGTCAGCTCTTGGCTGGCCCATCC | + |
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Preference number: 1 (lower is better) Translates to: ATHLDSPRPRSQECG*LSSLGTGQLLAGPS Trigger: GGATGGGCCAGCCAAGAGCTGACCCGTCCCCAAACTTGACAATCACCCACACTCCTGGCTCCTGGGTCTGGGTGAGTCCAAGTGTGTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
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| 3UTR CCA 90 bp | GTGGCCCTCGGTCCCACTATCCCTGAAAGCAGAGGGGAACCTGGGTaGGAAGGGCACTGGATGACGCCAGAGGCTACTTTGGCAAATACC | + |
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Preference number: 1 (lower is better) Translates to: VALGPTIPESRGEPG*EGHWMTPEATLANT Trigger: GGTATTTGCCAAAGTAGCCTCTGGCGTCATCCAGTGCCCTTCCCACCCAGGTTCCCCTCTGCTTTCAGGGATAGTGGGACCGAGGGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
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| 3UTR CCA 90 bp | AACAGCCACACACTTGGACTCACCCAGACCCAGGAGCCAGGAGTGTaGGTGATTGTCAAGTTTGGGGACGGGTCAGCTCTTGGCTGGCCC | + |
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Preference number: 1 (lower is better) Translates to: NSHTLGLTQTQEPGV*VIVKFGDGSALGWP Trigger: GGGCCAGCCAAGAGCTGACCCGTCCCCAAACTTGACAATCACCCACACTCCTGGCTCCTGGGTCTGGGTGAGTCCAAGTGTGTGGCTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
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| 3UTR TCA 90 bp | TGGGTGGGGCTAGTGGACAGCCATATGGAGGCAGAGCTCCAAATGTaGAGCCCTGGTGGAGGTAGGCTGTGGGGAGAAACAGGAAGGCCA | + |
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Preference number: 1 (lower is better) Translates to: WVGLVDSHMEAELQM*SPGGGRLWGETGRP Trigger: TGGCCTTCCTGTTTCTCCCCACAGCCTACCTCCACCAGGGCTTCACATTTGGAGCTCTGCCTCCATATGGCTGTCCACTAGCCCCACCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
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| 3UTR TCA 90 bp | GAGCAGGGGACAGTGCTGCAGGAAGGGGTCGAGGGCTGTGAGTACTaGCCCAAAGAAATGCCTGGCCACAAGGCCTCAGGTGGGAAAGAA | + |
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Preference number: 1 (lower is better) Translates to: EQGTVLQEGVEGCEY*PKEMPGHKASGGKE Trigger: TTCTTTCCCACCTGAGGCCTTGTGGCCAGGCATTTCTTTGGGTCAGTACTCACAGCCCTCGACCCCTTCCTGCAGCACTGTCCCCTGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119251.8 |
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| 3UTR GCA 90 bp | TTGGTTCTTTACGTCTATCTGGGAATGGGATGGGAGGGCTCCACATaGAGGGCTCGGCACCTGTCCTTCTCCAAGGCCTACCGCCTCCCT | + |
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Preference number: 1 (lower is better) Translates to: LVLYVYLGMGWEGST*RARHLSFSKAYRLP Trigger: AGGGAGGCGGTAGGCCTTGGAGAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCATCCCATTCCCAGATAGACGTAAAGAACCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
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| 3UTR GCA 90 bp | TACAGGAGCCTCCATGTGCCCAGTAAGTACTCTTCTGGACACAGGTaGACAAAGCCAAGAGGTGCCCTCCTCACCCTGCCCCTGACAAGC | + |
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Preference number: 1 (lower is better) Translates to: YRSLHVPSKYSSGHR*TKPRGALLTLPLTS Trigger: GCTTGTCAGGGGCAGGGTGAGGAGGGCACCTCTTGGCTTTGTGCACCTGTGTCCAGAAGAGTACTTACTGGGCACATGGAGGCTCCTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
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| 3UTR GCA 90 bp | CTTGTGAGGAGGAGTGGGAAGGTGAGGCATGTGGGTAGCACCCCATaGTTGGTCAGCTACTGGGGTAAACTCTGGTTAAGGGAGGGTCCC | + |
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Preference number: 1 (lower is better) Translates to: LVRRSGKVRHVGSTP*LVSYWGKLWLREGP Trigger: GGGACCCTCCCTTAACCAGAGTTTACCCCAGTAGCTGACCAAGCATGGGGTGCTACCCACATGCCTCACCTTCCCACTCCTCCTCACAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
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| 3UTR CCA 90 bp | GGGAAGGTGAGGCATGTGGGTAGCACCCCATGCTTGGTCAGCTACTaGGGTAAACTCTGGTTAAGGGAGGGTCCCTGCCTTACAAAAGGC | + |
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Preference number: 1 (lower is better) Translates to: GKVRHVGSTPCLVSY*GKLWLREGPCLTKG Trigger: GCCTTTTGTAAGGCAGGGACCCTCCCTTAACCAGAGTTTACCCCAGTAGCTGACCAAGCATGGGGTGCTACCCACATGCCTCACCTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
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| 3UTR TCA 90 bp | ACCCAATGCTTCTTCCACTGCCCCTGGTGCTTGCTGCAGCCCCACTaGGGAGGCAACAAAGCATTAGTCTGGAGAGGAAGGCAAGAACAC | + |
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Preference number: 1 (lower is better) Translates to: TQCFFHCPWCLLQPH*GGNKALVWRGRQEH Trigger: GTGTTCTTGCCTTCCTCTCCAGACTAATGCTTTGTTGCCTCCTCAGTGGGGCTGCAGCAAGCACCAGGGGCAGTGGAAGAAGCATTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
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| 3UTR GCA 90 bp | TGCAGACACAGACACGCACACGCACGCACACACACACACAGTGCATaGACGCATCCGTACATGGCAATCACAAGCCAGGTTTGCTTTCGG | + |
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Preference number: 1 (lower is better) Translates to: CRHRHAHARTHTHSA*THPYMAITSQVCFR Trigger: CCGAAAGCAAACCTGGCTTGTGATTGCCATGTACGGATGCGTGCATGCACTGTGTGTGTGTGTGCGTGCGTGTGCGTGTCTGTGTCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
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| 3UTR CCA 90 bp | TGCTCTCAGTGCCCCAGGGAACCAAAGGACGACTCTGGCCCATCCTaGAGCCACTTCAATGAAGGTCCTCTCCCAAATCTCCCAGTACAT | + |
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Preference number: 1 (lower is better) Translates to: CSQCPREPKDDSGPS*SHFNEGPLPNLPVH Trigger: ATGTACTGGGAGATTTGGGAGAGGACCTTCATTGAAGTGGCTCCAGGATGGGCCAGAGTCGTCCTTTGGTTCCCTGGGGCACTGAGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
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| 3UTR CCA 90 bp | CCATCGTACTACAACACTGAGCCTTGTCTAACTCTACCCTCCAGCTaGGAGGAACTCCAAGGGAGTGTGTGCTGTCTCCCATCCCCTTTC | + |
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Preference number: 1 (lower is better) Translates to: PSYYNTEPCLTLPSS*EELQGSVCCLPSPF Trigger: GAAAGGGGATGGGAGACAGCACACACTCCCTTGGAGTTCCTCCCAGCTGGAGGGTAGAGTTAGACAAGGCTCAGTGTTGTAGTACGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
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| 3UTR TCA 90 bp | CAGGGAACCAAAGGACGACTCTGGCCCATCCTGGAGCCACTTCAATaGAGGTCCTCTCCCAAATCTCCCAGTACATGGCCAGCTTTCTTT | + |
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Preference number: 1 (lower is better) Translates to: QGTKGRLWPILEPLQ*RSSPKSPSTWPAFF Trigger: AAAGAAAGCTGGCCATGTACTGGGAGATTTGGGAGAGGACCTTCATTGAAGTGGCTCCAGGATGGGCCAGAGTCGTCCTTTGGTTCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
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| 3UTR TCA 90 bp | AAAAGGCTGGGTCACAGGTGGGCAAAGACCATCGTACTACAACACTaGGCCTTGTCTAACTCTACCCTCCAGCTGGGAGGAACTCCAAGG | + |
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Preference number: 1 (lower is better) Translates to: KRLGHRWAKTIVLQH*ALSNSTLQLGGTPR Trigger: CCTTGGAGTTCCTCCCAGCTGGAGGGTAGAGTTAGACAAGGCTCAGTGTTGTAGTACGATGGTCTTTGCCCACCTGTGACCCAGCCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
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| 3UTR GCA 90 bp | CAAACACATAAATACAGGGTGAACCCAGATACGCCTCCACGAGCATaGTCACACCCCTCTGCTTCTGGCTCCTTCCCTGCATCAAGTGTC | + |
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Preference number: 1 (lower is better) Translates to: QTHKYRVNPDTPPRA*SHPSASGSFPASSV Trigger: GACACTTGATGCAGGGAAGGAGCCAGAAGCAGAGGGGTGTGAGCATGCTCGTGGAGGCGTATCTGGGTTCACCCTGTATTTATGTGTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
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| 3UTR TCA 90 bp | CAAAGGTACATCCGCACAGCTGCACACAAACACATAAATACAGGGTaGACCCAGATACGCCTCCACGAGCATGCTCACACCCCTCTGCTT | + |
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Preference number: 1 (lower is better) Translates to: QRYIRTAAHKHINTG*TQIRLHEHAHTPLL Trigger: AAGCAGAGGGGTGTGAGCATGCTCGTGGAGGCGTATCTGGGTTCACCCTGTATTTATGTGTTTGTGTGCAGCTGTGCGGATGTACCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
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| 3UTR GCA 90 bp | CAGGGTGAACCCAGATACGCCTCCACGAGCATGCTCACACCCCTCTaGTTCTGGCTCCTTCCCTGCATCAAGTGTCAAAATACTACAAAA | + |
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Preference number: 1 (lower is better) Translates to: QGEPRYASTSMLTPL*FWLLPCIKCQNTTK Trigger: TTTTGTAGTATTTTGACACTTGATGCAGGGAAGGAGCCAGAAGCAGAGGGGTGTGAGCATGCTCGTGGAGGCGTATCTGGGTTCACCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
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| 3UTR CCA 90 bp | TCTCTCCATGTTATCTCTAGAGATTCCAACCTCAAGCCCCTTCCCTaGCCTCAGATTCCTAGGCAGCCTTTCTATCACCCAGATCTTGGG | + |
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Preference number: 1 (lower is better) Translates to: SLHVISRDSNLKPLP*PQIPRQPFYHPDLG Trigger: CCCAAGATCTGGGTGATAGAAAGGCTGCCTAGGAATCTGAGGCCAGGGAAGGGGCTTGAGGTTGGAATCTCTAGAGATAACATGGAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
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| 3UTR CCA 90 bp | CCCTGCCTTACAAAAGGCAAAGCTCCGGGCAAGAAGAACTTGAGTTaGCTCCATAAACAAGTCAGAACTCCAGGGATGAACCATGCCTGG | + |
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Preference number: 1 (lower is better) Translates to: PCLTKGKAPGKKNLS*LHKQVRTPGMNHAW Trigger: CCAGGCATGGTTCATCCCTGGAGTTCTGACTTGTTTATGGAGCCAACTCAAGTTCTTCTTGCCCGGAGCTTTGCCTTTTGTAAGGCAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
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| 3UTR TCA 90 bp | GTTTGCTTTCGGGAAGCAGATGGCAAACTGTTGAGTAGCACACTGTaGACTATAGGGGCTTCACCCACAACTGTAATGGTGGCCAAGCTC | + |
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Preference number: 1 (lower is better) Translates to: VCFREADGKLLSSTL*TIGASPTTVMVAKL Trigger: GAGCTTGGCCACCATTACAGTTGTGGGTGAAGCCCCTATAGTTCACAGTGTGCTACTCAACAGTTTGCCATCTGCTTCCCGAAAGCAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
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| 3UTR GCA 90 bp | CTGGGGATACTAAACTGCAGAAATGTCACATACTCATTCACAGACTaGCCCTTCAGTCAGGGACAGAGACACACAAGAACTCATACGTGT | + |
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Preference number: 1 (lower is better) Translates to: LGILNCRNVTYSFTD*PFSQGQRHTRTHTC Trigger: ACACGTATGAGTTCTTGTGTGTCTCTGTCCCTGACTGAAGGGGCAGTCTGTGAATGAGTATGTGACATTTCTGCAGTTTAGTATCCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
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| 3UTR CCA 90 bp | TTTGGGTTTCAGTCCACTATCTGGGTTTTGTTGTTGGGTAGTTTTTaGTTCTTTACGTCTATCTGGGAATGGGATGGGAGGGCTCCACAT | + |
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Preference number: 1 (lower is better) Translates to: FGFQSTIWVLLLGSF*FFTSIWEWDGRAPH Trigger: ATGTGGAGCCCTCCCATCCCATTCCCAGATAGACGTAAAGAACCAAAAACTACCCAACAACAAAACCCAGATAGTGGACTGAAACCCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGGGAATGGGATGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTCTCGCGAGCGAGGCTAGCTaGAGGTCACTGAGCAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: SGNGMGGLHMQGSAPVLLASEAS*RSLSRG Trigger: TCCCCTGCTCAGTGACCTCCAGCTAGCCTCGCTCGC...GAGAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCATCCCATTCCCAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119251.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCCAGCTGGGAGGAACTCCAAGGGAGTGTGTGCTGTCTCCCATCCCCTTTCCGTTTGGGATGTGGCCTaGAGGTGGAGGGACAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: PPAGRNSKGVCAVSHPLSVWDVA*RWRDRR Trigger: CCTCCTGTCCCTCCACCTCCAGGCCACATCCCAAAC...GGAAAGGGGATGGGAGACAGCACACACTCCCTTGGAGTTCCTCCCAGCTGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
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| 3UTR-3UTR TCA 90 bp | ATCCAGCAAGAGGTCCAAGGACCCAATGCTTCTTCCACTGCCCCTGGTGCTTGCTCCTCACCCTGCCCCTaGCAAGCCTCCTGCTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: IQQEVQGPNASSTAPGACSSPCP*QASCSQ Trigger: CTGAGAGCAGGAGGCTTGTCAGGGGCAGGGTGAGGA...GCAAGCACCAGGGGCAGTGGAAGAAGCATTGGGTCCTTGGACCTCTTGCTGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
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| 3UTR-3UTR CCA 90 bp | AAGGACGACTCTGGCCCATCCTGGAGCCACTTCAATGAAGGTCCTCTCCCAAATAGGAGCTCAGAGGCCTaGGGAAGGGCCCGGGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: KDDSGPSWSHFNEGPLPNRSSEA*GRARAS Trigger: TGAGGCCCGGGCCCTTCCCCAGGCCTCTGAGCTCCT...ATTTGGGAGAGGACCTTCATTGAAGTGGCTCCAGGATGGGCCAGAGTCGTCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
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| 3UTR CAA 90 bp | GTGAGGAGGAGTGGGAAGGTGAGGCATGTGGGTAGCACCCCATGCTaGGTCAGCTACTGGGGTAAACTCTGGTTAAGGGAGGGTCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: VRRSGKVRHVGSTPC*VSYWGKLWLREGPC Trigger: GCAGGGACCCTCCCTTAACCAGAGTTTACCCCAGTAGCTGACCAAGCATGGGGTGCTACCCACATGCCTCACCTTCCCACTCCTCCTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
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| 3UTR-3UTR TCA 90 bp | TCTGGGAATGGGATGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTCTCATGGAGAAGGTGGTGTaGGGGGCAATGTGGCCTATA | + |
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Preference number: 2 (lower is better) Translates to: SGNGMGGLHMQGSAPVLLMEKVV*GAMWPI Trigger: TATAGGCCACATTGCCCCTCACACCACCTTCTCCAT...GAGAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCATCCCATTCCCAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119251.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGGGAATGGGATGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTCTCAGGATAAGGAGGGGGTaGGCGGTGAGATTGTCAACT | + |
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Preference number: 2 (lower is better) Translates to: SGNGMGGLHMQGSAPVLLRIRRG*AVRLST Trigger: AGTTGACAATCTCACCGCCCACCCCCTCCTTATCCT...GAGAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCATCCCATTCCCAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
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| 3UTR-3UTR CCA 90 bp | ATCCAGCAAGAGGTCCAAGGACCCAATGCTTCTTCCACTGCCCCTGGTGCTTGCGCAGAAGAAAGGAAGTaGGGTCGAGCGGGAGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: IQQEVQGPNASSTAPGACAEERK*GRAGGA Trigger: GGCTCCTCCCGCTCGACCCCACTTCCTTTCTTCTGC...GCAAGCACCAGGGGCAGTGGAAGAAGCATTGGGTCCTTGGACCTCTTGCTGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
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| 3UTR-3UTR CCA 90 bp | CCTCCAGCTGGGAGGAACTCCAAGGGAGTGTGTGCTGTCTCCCATCCCCTTTCCCTGGAGGGACCAGGATaGGTATTAGCCGTGAACAGC | + |
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Preference number: 2 (lower is better) Translates to: PPAGRNSKGVCAVSHPLSLEGPG*VLAVNS Trigger: GCTGTTCACGGCTAATACCCATCCTGGTCCCTCCAG...GGAAAGGGGATGGGAGACAGCACACACTCCCTTGGAGTTCCTCCCAGCTGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
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| 3UTR-3UTR TCA 90 bp | GTGGGCGGTGAGATTGTCAACTCTTCATCAGGGAGGCTGAAAGGAGGGAGTGGGGGAGGGGGTGGGCGGTaGGATTGTCAACTCTTCATC | + |
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Preference number: 2 (lower is better) Translates to: VGGEIVNSSSGRLKGGSGGGGGR*DCQLFI Trigger: GATGAAGAGTTGACAATCTCACCGCCCACCCCCTCC...CCCACTCCCTCCTTTCAGCCTCCCTGATGAAGAGTTGACAATCTCACCGCCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTCTCCCAAATCTCCCAGTACATGGCCAGCTTTCTTTAGGATTGGGGTAGGCTGGGAGGGCTCCACATaGAGGGCTCGGCACCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: SSPKSPSTWPAFFRIGVGWEGST*RARHLS Trigger: GGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCA...GCCTACCCCAATCCTAAAGAAAGCTGGCCATGTACTGGGAGATTTGGGAGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTCTCCCAAATCTCCCAGTACATGGCCAGCTTTCTTTAGGATTGGGGTAGGCGAGCACGCAGAGAGCTaGGAGGTGGGTCAGGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: SSPKSPSTWPAFFRIGVGEHAES*EVGQGQ Trigger: CTGCCCCTGACCCACCTCCCAGCTCTCTGCGTGCTC...GCCTACCCCAATCCTAAAGAAAGCTGGCCATGTACTGGGAGATTTGGGAGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
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| 3UTR-3UTR TCA 90 bp | ACAATTACAGTAGCAAGAGGGCAGGTTTGGGATGTGGCCTGGAGGTGGAGGGACCCTCCTCCTATCCCCTaGGACACAAGCCCATCGTCA | + |
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Preference number: 2 (lower is better) Translates to: TITVARGQVWDVAWRWRDPPPIP*DTSPSS Trigger: TGACGATGGGCTTGTGTCTCAGGGGATAGGAGGAGG...GTCCCTCCACCTCCAGGCCACATCCCAAACCTGCCCTCTTGCTACTGTAATTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
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| 3UTR-3UTR TCA 90 bp | TCCTCTCCCAAATCTCCCAGTACATGGCCAGCTTTCTTTAGGATTGGGGTAGGCTCCTCACCCTGCCCCTaGCAAGCCTCCTGCTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: SSPKSPSTWPAFFRIGVGSSPCP*QASCSQ Trigger: CTGAGAGCAGGAGGCTTGTCAGGGGCAGGGTGAGGA...GCCTACCCCAATCCTAAAGAAAGCTGGCCATGTACTGGGAGATTTGGGAGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
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| 3UTR-3UTR TCA 90 bp | ATGGGTATTAGCCGTGAACAGCCCAGAAGCAGAAACTGCCTCCTCCTATCCCCTCTAGCTGGAGGTCACTaGGCAGGGGACAGTGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: MGISREQPRSRNCLLLSPLAGGH*AGDSAA Trigger: TGCAGCACTGTCCCCTGCTCAGTGACCTCCAGCTAG...AGGGGATAGGAGGAGGCAGTTTCTGCTTCTGGGCTGTTCACGGCTAATACCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119251.8 |
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| 3UTR-3UTR GCA 90 bp | GAACAAGGAGCTCCCAGCCTCTTAGGAGAGCCTACATTCCCCCACAGGGGTTCCCGCCTCCCTCCTTCCTaGAGCATATGTGTACAACGT | + |
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Preference number: 2 (lower is better) Translates to: EQGAPSLLGEPTFPHRGSRLPPS*SICVQR Trigger: ACGTTGTACACATATGCTGCAGGAAGGAGGGAGGCG...GGAACCCCTGTGGGGGAATGTAGGCTCTCCTAAGAGGCTGGGAGCTCCTTGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
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| 3UTR-3UTR GCA 90 bp | TTTTGGTTCTTTACGTCTATCTGGGAATGGGATGGGAGGGCTCCACATGCAGGGCTGAGCAGGGGACAGTaGTGCAGGAAGGGGTCGAGG | + |
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Preference number: 2 (lower is better) Translates to: FWFFTSIWEWDGRAPHAGLSRGQ*CRKGSR Trigger: CCTCGACCCCTTCCTGCAGCACTGTCCCCTGCTCAG...CCCTGCATGTGGAGCCCTCCCATCCCATTCCCAGATAGACGTAAAGAACCAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000119251.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGGATGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTCTCCAAGGCCACCATCAACAGGACATaGAGCAGAAGAAAGGAAGTG | + |
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Preference number: 2 (lower is better) Translates to: MGWEGSTCRARHLSFSKATINRT*SRRKEV Trigger: CACTTCCTTTCTTCTGCTCCATGTCCTGTTGATGGT...GGCCTTGGAGAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCATCCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAGCCTCCATGTGCCCAGTAAGTACTCTTCTGGACACAGGTGCACAAAGCCAGTTTGGGATGTGGCCTaGAGGTGGAGGGACAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: RSLHVPSKYSSGHRCTKPVWDVA*RWRDRR Trigger: CCTCCTGTCCCTCCACCTCCAGGCCACATCCCAAAC...TGGCTTTGTGCACCTGTGTCCAGAAGAGTACTTACTGGGCACATGGAGGCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
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| 3UTR-3UTR TCA 90 bp | GTGGGCGGTGAGATTGTCAACTCTTCATCAGGGAGGCTGAAAGGAGGGAGTGGGAGGGGTCGAGGGCTGTaGGTACTGACCCAAAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: VGGEIVNSSSGRLKGGSGRGRGL*VLTQRN Trigger: ATTTCTTTGGGTCAGTACTCACAGCCCTCGACCCCT...CCCACTCCCTCCTTTCAGCCTCCCTGATGAAGAGTTGACAATCTCACCGCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119251.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTCTCCCAAATCTCCCAGTACATGGCCAGCTTTCTTTAGGATTGGGGTAGGCCACAAAGCCAAGAGGTaGCCTCCTCACCCTGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: SSPKSPSTWPAFFRIGVGHKAKR*PPHPAP Trigger: AGGGGCAGGGTGAGGAGGGCACCTCTTGGCTTTGTG...GCCTACCCCAATCCTAAAGAAAGCTGGCCATGTACTGGGAGATTTGGGAGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCATTTGAGGTCTAGGTTCCCAGGGATCCATTTACCTGGCCAGCCAGAAGCCACGTCTATCTGGGAATaGGATGGGAGGGCTCCACAT | + |
|
Preference number: 2 (lower is better) Translates to: PHLRSRFPGIHLPGQPEATSIWE*DGRAPH Trigger: ATGTGGAGCCCTCCCATCCCATTCCCAGATAGACGT...GGCTTCTGGCTGGCCAGGTAAATGGATCCCTGGGAACCTAGACCTCAAATGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| 3UTR-3UTR CCA 90 bp | GAACCAAAGGACGACTCTGGCCCATCCTGGAGCCACTTCAATGAAGGTCCTCTCACCAAAGGACGACTCTaGCCCATCCTGGAGCCACTT | + |
|
Preference number: 2 (lower is better) Translates to: EPKDDSGPSWSHFNEGPLTKGRL*PILEPL Trigger: AAGTGGCTCCAGGATGGGCCAGAGTCGTCCTTTGGT...GAGAGGACCTTCATTGAAGTGGCTCCAGGATGGGCCAGAGTCGTCCTTTGGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| 3UTR CAA 90 bp | AAGGCGCTGATCCCTTGTAAACACACCCAGCTCACACAGAGGCCCTaGGAGCTTGAGTCACTCAAAGGTACATCCGCACAGCTGCACACA | + |
|
Preference number: 2 (lower is better) Translates to: KALIPCKHTQLTQRP*ELESLKGTSAQLHT Trigger: TGTGTGCAGCTGTGCGGATGTACCTTTGAGTGACTCAAGCTCCAAGGGCCTCTGTGTGAGCTGGGTGTGTTTACAAGGGATCAGCGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| 3UTR-3UTR TCA 90 bp | TTTTGGTTCTTTACGTCTATCTGGGAATGGGATGGGAGGGCTCCACATGCAGGGCCTCCTCCTATCCCCTaGGACACAAGCCCATCGTCA | + |
|
Preference number: 2 (lower is better) Translates to: FWFFTSIWEWDGRAPHAGPPPIP*DTSPSS Trigger: TGACGATGGGCTTGTGTCTCAGGGGATAGGAGGAGG...CCCTGCATGTGGAGCCCTCCCATCCCATTCCCAGATAGACGTAAAGAACCAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| 3UTR-3UTR TCA 90 bp | ATCCAGCAAGAGGTCCAAGGACCCAATGCTTCTTCCACTGCCCCTGGTGCTTGCCAGGATCAGAGAGTGTaGTACGTATGCAGGAAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: IQQEVQGPNASSTAPGACQDQRV*YVCRKL Trigger: CAGCTTCCTGCATACGTATCACACTCTCTGATCCTG...GCAAGCACCAGGGGCAGTGGAAGAAGCATTGGGTCCTTGGACCTCTTGCTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| 3UTR-3UTR GCA 90 bp | ACAATTACAGTAGCAAGAGGGCAGGTTTGGGATGTGGCCTGGAGGTGGAGGGACCGCCTCCCTCCTTCCTaGAGCATATGTGTACAACGT | + |
|
Preference number: 2 (lower is better) Translates to: TITVARGQVWDVAWRWRDRLPPS*SICVQR Trigger: ACGTTGTACACATATGCTGCAGGAAGGAGGGAGGCG...GTCCCTCCACCTCCAGGCCACATCCCAAACCTGCCCTCTTGCTACTGTAATTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| 3UTR-3UTR GCA 90 bp | GCCCTCTTTCTACAGCTGTCTCTCTCCATGTTATCTCTAGAGATTCCAACCTCATGGGAGGGCTCCACATaGAGGGCTCGGCACCTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: ALFLQLSLSMLSLEIPTSWEGST*RARHLS Trigger: GGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCA...TGAGGTTGGAATCTCTAGAGATAACATGGAGAGAGACAGCTGTAGAAAGAGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| 3UTR-3UTR CCA 90 bp | TACAACACTGAGCCTTGTCTAACTCTACCCTCCAGCTGGGAGGAACTCCAAGGGTATCTGGGAATGGGATaGGAGGGCTCCACATGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: YNTEPCLTLPSSWEELQGYLGMG*EGSTCR Trigger: CCTGCATGTGGAGCCCTCCCATCCCATTCCCAGATA...CCCTTGGAGTTCCTCCCAGCTGGAGGGTAGAGTTAGACAAGGCTCAGTGTTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| 3UTR-3UTR CCA 90 bp | AGGAGCCTCCATGTGCCCAGTAAGTACTCTTCTGGACACAGGTGCACAAAGCCACTGGAGGGACCAGGATaGGTATTAGCCGTGAACAGC | + |
|
Preference number: 2 (lower is better) Translates to: RSLHVPSKYSSGHRCTKPLEGPG*VLAVNS Trigger: GCTGTTCACGGCTAATACCCATCCTGGTCCCTCCAG...TGGCTTTGTGCACCTGTGTCCAGAAGAGTACTTACTGGGCACATGGAGGCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGGACGACTCTGGCCCATCCTGGAGCCACTTCAATGAAGGTCCTCTCCCAAATACCAAAGGACGACTCTaGCCCATCCTGGAGCCACTT | + |
|
Preference number: 2 (lower is better) Translates to: KDDSGPSWSHFNEGPLPNTKGRL*PILEPL Trigger: AAGTGGCTCCAGGATGGGCCAGAGTCGTCCTTTGGT...ATTTGGGAGAGGACCTTCATTGAAGTGGCTCCAGGATGGGCCAGAGTCGTCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGGACGACTCTGGCCCATCCTGGAGCCACTTCAATGAAGGTCCTCTCCCAAATGAGAGTCCCCATCAGTaGAAATGGTGGGGGCAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: KDDSGPSWSHFNEGPLPNESPHQ*KWWGQE Trigger: TTCTTGCCCCCACCATTTTCACTGATGGGGACTCTC...ATTTGGGAGAGGACCTTCATTGAAGTGGCTCCAGGATGGGCCAGAGTCGTCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTCCTTCTGTCCTCATCAGCCCTCTTTCTACAGCTGTCTCTCTCCATGTTATCGCCTCCTGCTCTCAGTaGCCCAGGGAACCAAAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: SPSVLISPLSTAVSLHVIASCSQ*PREPKD Trigger: GTCCTTTGGTTCCCTGGGGCACTGAGAGCAGGAGGC...GATAACATGGAGAGAGACAGCTGTAGAAAGAGGGCTGATGAGGACAGAAGGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGGACGACTCTGGCCCATCCTGGAGCCACTTCAATGAAGGTCCTCTCCCAAATACTGACCCAAAGAAATaGCTGGCCACAAGGCCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: KDDSGPSWSHFNEGPLPNTDPKK*LATRPQ Trigger: CTGAGGCCTTGTGGCCAGGCATTTCTTTGGGTCAGT...ATTTGGGAGAGGACCTTCATTGAAGTGGCTCCAGGATGGGCCAGAGTCGTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119251.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAGGAAAAGCTGGGGGTAGGGTCCCAATTCACCACACCCAGTCCTTCTGTCCTACGTCTATCTGGGAATaGGATGGGAGGGCTCCACAT | + |
|
Preference number: 2 (lower is better) Translates to: KGKAGGRVPIHHTQSFCPTSIWE*DGRAPH Trigger: ATGTGGAGCCCTCCCATCCCATTCCCAGATAGACGT...AGGACAGAAGGACTGGGTGTGGTGAATTGGGACCCTACCCCCAGCTTTTCCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGAGCCTCCATGTGCCCAGTAAGTACTCTTCTGGACACAGGTGCACAAAGCCAGACTCTGGCCCATCCTaGAGCCACTTCAATGAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: RSLHVPSKYSSGHRCTKPDSGPS*SHFNEG Trigger: ACCTTCATTGAAGTGGCTCCAGGATGGGCCAGAGTC...TGGCTTTGTGCACCTGTGTCCAGAAGAGTACTTACTGGGCACATGGAGGCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTGTGATACGTATGCAGGAAGCTGGAGGGACCAGGATGGGTATTAGCCGTGAAAGGATAAGGAGGGGGTaGGCGGTGAGATTGTCAACT | + |
|
Preference number: 2 (lower is better) Translates to: SVIRMQEAGGTRMGISRERIRRG*AVRLST Trigger: AGTTGACAATCTCACCGCCCACCCCCTCCTTATCCT...TTCACGGCTAATACCCATCCTGGTCCCTCCAGCTTCCTGCATACGTATCACACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGCATAGCCCCAGGAGAAACCTGGGGATACTAAACTGCAGAAATGTCACATACCTCAAGCCCCTTCCCTaGCCTCAGATTCCTAGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: LHSPRRNLGILNCRNVTYLKPLP*PQIPRQ Trigger: CTGCCTAGGAATCTGAGGCCAGGGAAGGGGCTTGAG...GTATGTGACATTTCTGCAGTTTAGTATCCCCAGGTTTCTCCTGGGGCTATGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| 3UTR-3UTR CCA 90 bp | AGTCCTTCTGTCCTCATCAGCCCTCTTTCTACAGCTGTCTCTCTCCATGTTATCCTCAAGCCCCTTCCCTaGCCTCAGATTCCTAGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: SPSVLISPLSTAVSLHVILKPLP*PQIPRQ Trigger: CTGCCTAGGAATCTGAGGCCAGGGAAGGGGCTTGAG...GATAACATGGAGAGAGACAGCTGTAGAAAGAGGGCTGATGAGGACAGAAGGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| 3UTR-3UTR CCA 90 bp | AATGGTGGGGGCAAGAAAGGGGCAAGAGCATCCCTCTCTCTAAAGCGAGAATTCCCACAAGGCCTCAGGTaGGAAAGAAAACAGGCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: NGGGKKGARASLSLKREFPQGLR*ERKQAE Trigger: CTCAGCCTGTTTTCTTTCCCACCTGAGGCCTTGTGG...GAATTCTCGCTTTAGAGAGAGGGATGCTCTTGCCCCTTTCTTGCCCCCACCATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000119251.8 |
||
| 3UTR-3UTR TCA 90 bp | AGTCCTTCTGTCCTCATCAGCCCTCTTTCTACAGCTGTCTCTCTCCATGTTATCGAGGGCTGTGAGTACTaGCCCAAAGAAATGCCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: SPSVLISPLSTAVSLHVIEGCEY*PKEMPG Trigger: GCCAGGCATTTCTTTGGGTCAGTACTCACAGCCCTC...GATAACATGGAGAGAGACAGCTGTAGAAAGAGGGCTGATGAGGACAGAAGGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119251.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCTGGAGCCACTTCAATGAAGGTCCTCTCCCAAATCTCCCAGTACATGGCCAGTTCTTTACGTCTATCTaGGAATGGGATGGGAGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: SWSHFNEGPLPNLPVHGQFFTSI*EWDGRA Trigger: AGCCCTCCCATCCCATTCCCAGATAGACGTAAAGAA...CTGGCCATGTACTGGGAGATTTGGGAGAGGACCTTCATTGAAGTGGCTCCAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGCATAGCCCCAGGAGAAACCTGGGGATACTAAACTGCAGAAATGTCACATACACTCTACCCTCCAGCTaGGAGGAACTCCAAGGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: LHSPRRNLGILNCRNVTYTLPSS*EELQGS Trigger: ACTCCCTTGGAGTTCCTCCCAGCTGGAGGGTAGAGT...GTATGTGACATTTCTGCAGTTTAGTATCCCCAGGTTTCTCCTGGGGCTATGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| 3UTR CAA 90 bp | GAGGGTCCCTGCCTTACAAAAGGCAAAGCTCCGGGCAAGAAGAACTaGAGTTGGCTCCATAAACAAGTCAGAACTCCAGGGATGAACCAT | + |
|
Preference number: 2 (lower is better) Translates to: EGPCLTKGKAPGKKN*SWLHKQVRTPGMNH Trigger: ATGGTTCATCCCTGGAGTTCTGACTTGTTTATGGAGCCAACTCAAGTTCTTCTTGCCCGGAGCTTTGCCTTTTGTAAGGCAGGGACCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| 3UTR-3UTR CCA 90 bp | TTTTGGTTCTTTACGTCTATCTGGGAATGGGATGGGAGGGCTCCACATGCAGGGTTCTTTACGTCTATCTaGGAATGGGATGGGAGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: FWFFTSIWEWDGRAPHAGFFTSI*EWDGRA Trigger: AGCCCTCCCATCCCATTCCCAGATAGACGTAAAGAA...CCCTGCATGTGGAGCCCTCCCATCCCATTCCCAGATAGACGTAAAGAACCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTCCTTCTGTCCTCATCAGCCCTCTTTCTACAGCTGTCTCTCTCCATGTTATCGACTCTGGCCCATCCTaGAGCCACTTCAATGAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: SPSVLISPLSTAVSLHVIDSGPS*SHFNEG Trigger: ACCTTCATTGAAGTGGCTCCAGGATGGGCCAGAGTC...GATAACATGGAGAGAGACAGCTGTAGAAAGAGGGCTGATGAGGACAGAAGGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| 3UTR-3UTR CCA 90 bp | CCAAAGGACGACTCTGGCCCATCCTGGAGCCACTTCAATGAAGGTCCTCTCCCATTGTTGGGTAGTTTTTaGTTCTTTACGTCTATCTGG | + |
|
Preference number: 2 (lower is better) Translates to: PKDDSGPSWSHFNEGPLPLLGSF*FFTSIW Trigger: CCAGATAGACGTAAAGAACCAAAAACTACCCAACAA...TGGGAGAGGACCTTCATTGAAGTGGCTCCAGGATGGGCCAGAGTCGTCCTTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| 3UTR CAA 90 bp | CGTCAAGCCAGCTTTGGGTTTCAGTCCACTATCTGGGTTTTGTTGTaGGGTAGTTTTTGGTTCTTTACGTCTATCTGGGAATGGGATGGG | + |
|
Preference number: 2 (lower is better) Translates to: RQASFGFQSTIWVLL*GSFWFFTSIWEWDG Trigger: CCCATCCCATTCCCAGATAGACGTAAAGAACCAAAAACTACCCAACAACAAAACCCAGATAGTGGACTGAAACCCAAAGCTGGCTTGACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| 3UTR CAA 90 bp | GCCCATCGTCAAGCCAGCTTTGGGTTTCAGTCCACTATCTGGGTTTaGTTGTTGGGTAGTTTTTGGTTCTTTACGTCTATCTGGGAATGG | + |
|
Preference number: 2 (lower is better) Translates to: AHRQASFGFQSTIWV*LLGSFWFFTSIWEW Trigger: CCATTCCCAGATAGACGTAAAGAACCAAAAACTACCCAACAACAAAACCCAGATAGTGGACTGAAACCCAAAGCTGGCTTGACGATGGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAACAACAACAAACACAACAGTTTCCTGGACGGTTACACCACTAACATTTGAAAGGAGATGGAGAAGGTaGTGTGAGGGGCAATGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: TTTTNTTVSWTVTPLTFERRWRR*CEGQCG Trigger: GCCACATTGCCCCTCACACCACCTTCTCCATCTCCT...TTCAAATGTTAGTGGTGTAACCGTCCAGGAAACTGTTGTGTTTGTTGTTGTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119251.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGGGGCAAGAAAGGGGCAAGAGCATCCCTCTCTCTAAAGCGAGAATTCGAATTTTGTTGGGTAGTTTTTaGTTCTTTACGTCTATCTGG | + |
|
Preference number: 2 (lower is better) Translates to: WGQERGKSIPLSKARIRILLGSF*FFTSIW Trigger: CCAGATAGACGTAAAGAACCAAAAACTACCCAACAA...AATTCGAATTCTCGCTTTAGAGAGAGGGATGCTCTTGCCCCTTTCTTGCCCCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| 3UTR CCA 72 bp | GGGGTCGAGCGGGAGGAGCCCAGGATAAGGAGGGGGTaGGCGGTGAGATTGTCAACTCTTCATCAGGGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: GVEREEPRIRRG*AVRLSTLHQGG Trigger: GCCTCCCTGATGAAGAGTTGACAATCTCACCGCCCACCCCCTCCTTATCCTGGGCTCCTCCCGCTCGACCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| 3UTR GCA 72 bp | AGCGAGGCTAGCTGGAGGTCACTGAGCAGGGGACAGTaGTGCAGGAAGGGGTCGAGGGCTGTGAGTACTGAC | + |
|
Preference number: 3 (lower is better) Translates to: SEASWRSLSRGQ*CRKGSRAVSTD Trigger: GTCAGTACTCACAGCCCTCGACCCCTTCCTGCAGCACTGTCCCCTGCTCAGTGACCTCCAGCTAGCCTCGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119251.8 |
||
| 3UTR TCA 72 bp | GCAGGGGACAGTGCTGCAGGAAGGGGTCGAGGGCTGTaGGTACTGACCCAAAGAAATGCCTGGCCACAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: AGDSAAGRGRGL*VLTQRNAWPQG Trigger: GCCTTGTGGCCAGGCATTTCTTTGGGTCAGTACTCACAGCCCTCGACCCCTTCCTGCAGCACTGTCCCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119251.8 |
||
| 3UTR TCA 72 bp | GGATGCACTGCTGGGGATGGAGGAAATGTGCTAAACTaGGGCATGTGGGGGTGGCCCTCGGTCCCACTATCC | + |
|
Preference number: 3 (lower is better) Translates to: GCTAGDGGNVLN*GMWGWPSVPLS Trigger: GGATAGTGGGACCGAGGGCCACCCCCACATGCCTCAGTTTAGCACATTTCCTCCATCCCCAGCAGTGCATCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| 3UTR GCA 72 bp | TACGTCTATCTGGGAATGGGATGGGAGGGCTCCACATaGAGGGCTCGGCACCTGTCCTTCTCCAAGGCCTAC | + |
|
Preference number: 3 (lower is better) Translates to: YVYLGMGWEGST*RARHLSFSKAY Trigger: GTAGGCCTTGGAGAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCATCCCATTCCCAGATAGACGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| 3UTR GCA 72 bp | CTGACCTCAGATCCAGCAAGAGGTCCAAGGACCCAATaGTTCTTCCACTGCCCCTGGTGCTTGCTGCAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: LTSDPARGPRTQ*FFHCPWCLLQP Trigger: GGGCTGCAGCAAGCACCAGGGGCAGTGGAAGAAGCATTGGGTCCTTGGACCTCTTGCTGGATCTGAGGTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| 3UTR TCA 72 bp | GCAGGCTGGGGAGGGGGCAAACTATTCCCTCCAGTCTaGCCTCAGATCCAGCAAGAGGTCCAAGGACCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: AGWGGGKLFPPV*PQIQQEVQGPN Trigger: ATTGGGTCCTTGGACCTCTTGCTGGATCTGAGGTCAGACTGGAGGGAATAGTTTGCCCCCTCCCCAGCCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| 3UTR TCA 72 bp | TTGGACTCACCCAGACCCAGGAGCCAGGAGTGTGGGTaGTTGTCAAGTTTGGGGACGGGTCAGCTCTTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LDSPRPRSQECG*LSSLGTGQLLA Trigger: AGCCAAGAGCTGACCCGTCCCCAAACTTGACAATCACCCACACTCCTGGCTCCTGGGTCTGGGTGAGTCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| 3UTR TCA 72 bp | ACAGTGCTGCAGGAAGGGGTCGAGGGCTGTGAGTACTaGCCCAAAGAAATGCCTGGCCACAAGGCCTCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: TVLQEGVEGCEY*PKEMPGHKASG Trigger: ACCTGAGGCCTTGTGGCCAGGCATTTCTTTGGGTCAGTACTCACAGCCCTCGACCCCTTCCTGCAGCACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119251.8 |
||
| 3UTR GCA 72 bp | CTCCATGTGCCCAGTAAGTACTCTTCTGGACACAGGTaGACAAAGCCAAGAGGTGCCCTCCTCACCCTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: LHVPSKYSSGHR*TKPRGALLTLP Trigger: GGGCAGGGTGAGGAGGGCACCTCTTGGCTTTGTGCACCTGTGTCCAGAAGAGTACTTACTGGGCACATGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| 3UTR TCA 72 bp | TTCTTCCACTGCCCCTGGTGCTTGCTGCAGCCCCACTaGGGAGGCAACAAAGCATTAGTCTGGAGAGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: FFHCPWCLLQPH*GGNKALVWRGR Trigger: CCTTCCTCTCCAGACTAATGCTTTGTTGCCTCCTCAGTGGGGCTGCAGCAAGCACCAGGGGCAGTGGAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| 3UTR TCA 72 bp | ACAGCCCAGAAGCAGAAACTGCCTCCTCCTATCCCCTaGGACACAAGCCCATCGTCAAGCCAGCTTTGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: TAQKQKLPPPIP*DTSPSSSQLWV Trigger: AACCCAAAGCTGGCTTGACGATGGGCTTGTGTCTCAGGGGATAGGAGGAGGCAGTTTCTGCTTCTGGGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| 3UTR TCA 72 bp | CTAGTGGACAGCCATATGGAGGCAGAGCTCCAAATGTaGAGCCCTGGTGGAGGTAGGCTGTGGGGAGAAACA | + |
|
Preference number: 3 (lower is better) Translates to: LVDSHMEAELQM*SPGGGRLWGET Trigger: TGTTTCTCCCCACAGCCTACCTCCACCAGGGCTTCACATTTGGAGCTCTGCCTCCATATGGCTGTCCACTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| 3UTR GCA 72 bp | AGACACGCACACGCACGCACACACACACACAGTGCATaGACGCATCCGTACATGGCAATCACAAGCCAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: RHAHARTHTHSA*THPYMAITSQV Trigger: AACCTGGCTTGTGATTGCCATGTACGGATGCGTGCATGCACTGTGTGTGTGTGTGCGTGCGTGTGCGTGTCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| 3UTR TCA 72 bp | AAAGGACGACTCTGGCCCATCCTGGAGCCACTTCAATaGAGGTCCTCTCCCAAATCTCCCAGTACATGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: KGRLWPILEPLQ*RSSPKSPSTWP Trigger: TGGCCATGTACTGGGAGATTTGGGAGAGGACCTTCATTGAAGTGGCTCCAGGATGGGCCAGAGTCGTCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| 3UTR TCA 72 bp | GGTCACAGGTGGGCAAAGACCATCGTACTACAACACTaGGCCTTGTCTAACTCTACCCTCCAGCTGGGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: GHRWAKTIVLQH*ALSNSTLQLGG Trigger: TCCTCCCAGCTGGAGGGTAGAGTTAGACAAGGCTCAGTGTTGTAGTACGATGGTCTTTGCCCACCTGTGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| 3UTR GCA 72 bp | ATGGGTATTAGCCGTGAACAGCCCAGAAGCAGAAACTaGCTCCTCCTATCCCCTGAGACACAAGCCCATCGT | + |
|
Preference number: 3 (lower is better) Translates to: MGISREQPRSRN*LLLSPETQAHR Trigger: ACGATGGGCTTGTGTCTCAGGGGATAGGAGGAGGCAGTTTCTGCTTCTGGGCTGTTCACGGCTAATACCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| 3UTR CCA 72 bp | TACAACACTGAGCCTTGTCTAACTCTACCCTCCAGCTaGGAGGAACTCCAAGGGAGTGTGTGCTGTCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: YNTEPCLTLPSS*EELQGSVCCLP Trigger: TGGGAGACAGCACACACTCCCTTGGAGTTCCTCCCAGCTGGAGGGTAGAGTTAGACAAGGCTCAGTGTTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| 3UTR CCA 72 bp | CATTTCTTTCTTCCTTCCTGTTGGAGTTGGGGAGGGTaGGTGGATGCACTGCTGGGGATGGAGGAAATGTGC | + |
|
Preference number: 3 (lower is better) Translates to: HFFLPSCWSWGG*VDALLGMEEMC Trigger: GCACATTTCCTCCATCCCCAGCAGTGCATCCACCCACCCTCCCCAACTCCAACAGGAAGGAAGAAAGAAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| 3UTR-3UTR CAA 90 bp | CCCCATTTGAGGTCTAGGTTCCCAGGGATCCATTTACCTGGCCAGCCAGAAGCCCCGGGCAAGAAGAACTaGAGTTGGCTCCATAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: PHLRSRFPGIHLPGQPEAPGKKN*SWLHKQ Trigger: TTGTTTATGGAGCCAACTCAAGTTCTTCTTGCCCGG...GGCTTCTGGCTGGCCAGGTAAATGGATCCCTGGGAACCTAGACCTCAAATGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| 3UTR TCA 72 bp | CAGATCTTGGGGTGTAACACACAGGATCAGAGAGTGTaGTACGTATGCAGGAAGCTGGAGGGACCAGGATGG | + |
|
Preference number: 3 (lower is better) Translates to: QILGCNTQDQRV*YVCRKLEGPGW Trigger: CCATCCTGGTCCCTCCAGCTTCCTGCATACGTATCACACTCTCTGATCCTGTGTGTTACACCCCAAGATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| 3UTR CCA 72 bp | TACGCCTCCACGAGCATGCTCACACCCCTCTGCTTCTaGCTCCTTCCCTGCATCAAGTGTCAAAATACTACA | + |
|
Preference number: 3 (lower is better) Translates to: YASTSMLTPLCF*LLPCIKCQNTT Trigger: TGTAGTATTTTGACACTTGATGCAGGGAAGGAGCCAGAAGCAGAGGGGTGTGAGCATGCTCGTGGAGGCGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| 3UTR-3UTR CAA 90 bp | TACAACACTGAGCCTTGTCTAACTCTACCCTCCAGCTGGGAGGAACTCCAAGGGTCTATCACCCAGATCTaGGGGTGTAACACACAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: YNTEPCLTLPSSWEELQGSITQI*GCNTQD Trigger: ATCCTGTGTGTTACACCCCAAGATCTGGGTGATAGA...CCCTTGGAGTTCCTCCCAGCTGGAGGGTAGAGTTAGACAAGGCTCAGTGTTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| 3UTR-3UTR CAA 90 bp | AAGGACGACTCTGGCCCATCCTGGAGCCACTTCAATGAAGGTCCTCTCCCAAATTCTATCACCCAGATCTaGGGGTGTAACACACAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: KDDSGPSWSHFNEGPLPNSITQI*GCNTQD Trigger: ATCCTGTGTGTTACACCCCAAGATCTGGGTGATAGA...ATTTGGGAGAGGACCTTCATTGAAGTGGCTCCAGGATGGGCCAGAGTCGTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| 3UTR GCA 72 bp | GAGAATTCAGATTCTCCTTGGGAATCTCAGCCCTCCTaGCCCATTACATCCCACCCCTTCTGCTTATGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: ENSDSPWESQPS*PITSHPFCLCR Trigger: TCTACATAAGCAGAAGGGGTGGGATGTAATGGGGCAGGAGGGCTGAGATTCCCAAGGAGAATCTGAATTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| 3UTR CCA 72 bp | TTGTTGTTGGGTAGTTTTTGGTTCTTTACGTCTATCTaGGAATGGGATGGGAGGGCTCCACATGCAGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: LLLGSFWFFTSI*EWDGRAPHAGL Trigger: GAGCCCTGCATGTGGAGCCCTCCCATCCCATTCCCAGATAGACGTAAAGAACCAAAAACTACCCAACAACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCTATTGCACTGTACATCTCAAAGGAAAAGCTGGGGGTAGGGTCCCAATTCACATCGTCAAGCCAGCTTaGGGTTTCAGTCCACTATCT | + |
|
Preference number: 3 (lower is better) Translates to: SYCTVHLKGKAGGRVPIHIVKPA*GFSPLS Trigger: AGATAGTGGACTGAAACCCAAAGCTGGCTTGACGAT...GTGAATTGGGACCCTACCCCCAGCTTTTCCTTTGAGATGTACAGTGCAATAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| 3UTR-3UTR CAA 90 bp | TACAACACTGAGCCTTGTCTAACTCTACCCTCCAGCTGGGAGGAACTCCAAGGGATCTGGGTTTTGTTGTaGGGTAGTTTTTGGTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: YNTEPCLTLPSSWEELQGIWVLL*GSFWFF Trigger: AAAGAACCAAAAACTACCCAACAACAAAACCCAGAT...CCCTTGGAGTTCCTCCCAGCTGGAGGGTAGAGTTAGACAAGGCTCAGTGTTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| 3UTR-3UTR CAA 90 bp | TCCGTACATGGCAATCACAAGCCAGGTTTGCTTTCGGGAAGCAGATGGCAAACTTCCACTATCTGGGTTTaGTTGTTGGGTAGTTTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: SVHGNHKPGLLSGSRWQTSTIWV*LLGSFW Trigger: CCAAAAACTACCCAACAACAAAACCCAGATAGTGGA...AGTTTGCCATCTGCTTCCCGAAAGCAAACCTGGCTTGTGATTGCCATGTACGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| 3UTR-3UTR CAA 90 bp | TGGGGGCAAGAAAGGGGCAAGAGCATCCCTCTCTCTAAAGCGAGAATTCGAATTTCCACTATCTGGGTTTaGTTGTTGGGTAGTTTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: WGQERGKSIPLSKARIRISTIWV*LLGSFW Trigger: CCAAAAACTACCCAACAACAAAACCCAGATAGTGGA...AATTCGAATTCTCGCTTTAGAGAGAGGGATGCTCTTGCCCCTTTCTTGCCCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| 3UTR GCA 72 bp | TGGAGCTTGAGTCACTCAAAGGTACATCCGCACAGCTaGACACAAACACATAAATACAGGGTGAACCCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: WSLSHSKVHPHS*TQTHKYRVNPD Trigger: ATCTGGGTTCACCCTGTATTTATGTGTTTGTGTGCAGCTGTGCGGATGTACCTTTGAGTGACTCAAGCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| 3UTR CCA 72 bp | ACAAAAGGCAAAGCTCCGGGCAAGAAGAACTTGAGTTaGCTCCATAAACAAGTCAGAACTCCAGGGATGAAC | + |
|
Preference number: 3 (lower is better) Translates to: TKGKAPGKKNLS*LHKQVRTPGMN Trigger: GTTCATCCCTGGAGTTCTGACTTGTTTATGGAGCCAACTCAAGTTCTTCTTGCCCGGAGCTTTGCCTTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| 3UTR-3UTR CAA 90 bp | TGGGGGCAAGAAAGGGGCAAGAGCATCCCTCTCTCTAAAGCGAGAATTCGAATTATCTGGGTTTTGTTGTaGGGTAGTTTTTGGTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: WGQERGKSIPLSKARIRIIWVLL*GSFWFF Trigger: AAAGAACCAAAAACTACCCAACAACAAAACCCAGAT...AATTCGAATTCTCGCTTTAGAGAGAGGGATGCTCTTGCCCCTTTCTTGCCCCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| 3UTR CCA 72 bp | GCTTTGGGTTTCAGTCCACTATCTGGGTTTTGTTGTTaGGTAGTTTTTGGTTCTTTACGTCTATCTGGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: ALGFSPLSGFCC*VVFGSLRLSGN Trigger: ATTCCCAGATAGACGTAAAGAACCAAAAACTACCCAACAACAAAACCCAGATAGTGGACTGAAACCCAAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| 3UTR CCA 72 bp | CATATCAATACAACAACAACAAACACAACAGTTTCCTaGACGGTTACACCACTAACATTTGAAAGGTCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: HINTTTTNTTVS*TVTPLTFERSL Trigger: TAGAGACCTTTCAAATGTTAGTGGTGTAACCGTCCAGGAAACTGTTGTGTTTGTTGTTGTTGTATTGATATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR TCA 90 bp | ATGGGATGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTCTCCAAGGCCGCTGCTGCCAGGCGGTaGCATTGCCTAGTGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: MGWEGSTCRARHLSFSKAAAARR*HCLVPA Trigger: GGCTGGCACTAGGCAATGTCACCGCCTGGCAGCAGC...GGCCTTGGAGAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCATCCCAT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR GCA 90 bp | TCTGGGAATGGGATGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTCTCTGGGGCGGCTGGGGCTaGTGCCAGGCGGTGACATTG | + |
|
Preference number: 4 (lower is better) Translates to: SGNGMGGLHMQGSAPVLLWGGWG*CQAVTL Trigger: CAATGTCACCGCCTGGCAGCAGCCCCAGCCGCCCCA...GAGAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCATCCCATTCCCAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CCA 90 bp | ATGGGATGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTCTCCAAGGCCTGTAGTGCTGGCTGCTaGGGGGACAGGAGCCGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: MGWEGSTCRARHLSFSKACSAGC*GDRSRG Trigger: CCCACGGCTCCTGTCCCCCCAGCAGCCAGCACTACA...GGCCTTGGAGAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCATCCCAT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CCA 90 bp | ATGGGATGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTCTCCAAGGCCCTGGGGGCTCCAAGCTaGGTGTTGTGGGTGGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: MGWEGSTCRARHLSFSKALGAPS*VLWVGG Trigger: CCCACCCACCCACAACACCCAGCTTGGAGCCCCCAG...GGCCTTGGAGAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCATCCCAT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR TCA 90 bp | GAAAACAGGCTGAGTGCATGTGGGGCATCCCTGGGTGACGCAGACACCGGCAGAAGAGCAGCACCCACGTaGGGCAAGGGGCTGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ENRLSACGASLGDADTGRRAAPT*GKGLPG Trigger: CCCTGGCAGCCCCTTGCCTCACGTGGGTGCTGCTCT...TCTGCCGGTGTCTGCGTCACCCAGGGATGCCCCACATGCACTCAGCCTGTTTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000119251.8 |
||
| CDS-3UTR TCA 90 bp | ATGGGATGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTCTCCAAGGCCCAAACTTCCGCTTGGTaGAGGTCACCTGGCGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: MGWEGSTCRARHLSFSKAQTSAW*RSPGGS Trigger: GGAACCGCCAGGTGACCTTCACCAAGCGGAAGTTTG...GGCCTTGGAGAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCATCCCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CCA 90 bp | GAAAACAGGCTGAGTGCATGTGGGGCATCCCTGGGTGACGCAGACACCGGCAGAAGCGAGTGGGTAGACTaGGAGACCCCAAGGCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ENRLSACGASLGDADTGRSEWVD*ETPRRW Trigger: CCAGCGCCTTGGGGTCTCCCAGTCTACCCACTCGCT...TCTGCCGGTGTCTGCGTCACCCAGGGATGCCCCACATGCACTCAGCCTGTTTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000119251.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGAAAAGCTGGGGGTAGGGTCCCAATTCACCACACCCAGTCCTTCTGTCCTGGCGGTTGTGGCTGCTaGGGCGGCTGGGGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KGKAGGRVPIHHTQSFCPGGCGC*GGWGCC Trigger: GCAGCAGCCCCAGCCGCCCCAGCAGCCACAACCGCC...AGGACAGAAGGACTGGGTGTGGTGAATTGGGACCCTACCCCCAGCTTTTCCTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CCA 90 bp | TCCTGGAGCCACTTCAATGAAGGTCCTCTCCCAAATCTCCCAGTACATGGCCAGGGCGGTTGTGGCTGCTaGGGCGGCTGGGGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SWSHFNEGPLPNLPVHGQGGCGC*GGWGCC Trigger: GCAGCAGCCCCAGCCGCCCCAGCAGCCACAACCGCC...CTGGCCATGTACTGGGAGATTTGGGAGAGGACCTTCATTGAAGTGGCTCCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CCA 90 bp | GAACCAAAGGACGACTCTGGCCCATCCTGGAGCCACTTCAATGAAGGTCCTCTCCGGTTGTGGCGGTTGTaGCTGCTGGGGCGGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: EPKDDSGPSWSHFNEGPLRLWRL*LLGRLG Trigger: CCCCAGCCGCCCCAGCAGCCACAACCGCCACAACCG...GAGAGGACCTTCATTGAAGTGGCTCCAGGATGGGCCAGAGTCGTCCTTTGGTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR TCA 90 bp | ATGGGATGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTCTCCAAGGCCAACTGCATGGAGCTCTaGTTGGACACGGGCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: MGWEGSTCRARHLSFSKANCMEL*LDTGTV Trigger: CACAGTGCCCGTGTCCAATCAGAGCTCCATGCAGTT...GGCCTTGGAGAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCATCCCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR TCA 90 bp | TCTGGGAATGGGATGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTCTCAGGGGAGGCCCTGGCTaGGTAAACTTGGTGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGNGMGGLHMQGSAPVLLRGGPG*VNLVLP Trigger: TGGCAACACCAAGTTTACTCAGCCAGGGCCTCCCCT...GAGAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCATCCCATTCCCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR TCA 90 bp | GTGGGCGGTGAGATTGTCAACTCTTCATCAGGGAGGCTGAAAGGAGGGAGTGGGTGGTGGCTGTGGCTGTaGCTGTGGCGGTTGTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VGGEIVNSSSGRLKGGSGWWLWL*LWRLWR Trigger: CCGCCACAACCGCCACAGTCACAGCCACAGCCACCA...CCCACTCCCTCCTTTCAGCCTCCCTGATGAAGAGTTGACAATCTCACCGCCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR TCA 90 bp | CCTCCAGCTGGGAGGAACTCCAAGGGAGTGTGTGCTGTCTCCCATCCCCTTTCCAAGTGGGGCTGTTGCTaGGGTGGCTGCTGTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PPAGRNSKGVCAVSHPLSKWGCC*GGCCGC Trigger: ACAGCCACAGCAGCCACCTCAGCAACAGCCCCACTT...GGAAAGGGGATGGGAGACAGCACACACTCCCTTGGAGTTCCTCCCAGCTGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| CDS-3UTR CCA 90 bp | GTGGGCGGTGAGATTGTCAACTCTTCATCAGGGAGGCTGAAAGGAGGGAGTGGGGCTGGGTGTTGTGGGTaGGTGGGGGCGGAGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VGGEIVNSSSGRLKGGSGAGCCG*VGAETW Trigger: CCAAGTCTCCGCCCCCACCCACCCACAACACCCAGC...CCCACTCCCTCCTTTCAGCCTCCCTGATGAAGAGTTGACAATCTCACCGCCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCCAGGATAAGGAGGGGGTGGGCGGTGAGATTGTCAACTCTTCATCAGGGACTGGGGGCTCCAAGCTaGGTGTTGTGGGTGGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EPRIRRGWAVRLSTLHQGLGAPS*VLWVGG Trigger: CCCACCCACCCACAACACCCAGCTTGGAGCCCCCAG...TCCCTGATGAAGAGTTGACAATCTCACCGCCCACCCCCTCCTTATCCTGGGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CCA 90 bp | ATCCAGCAAGAGGTCCAAGGACCCAATGCTTCTTCCACTGCCCCTGGTGCTTGCCTCAGGGCGGGCAGCTaGGAACACAGCTGGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IQQEVQGPNASSTAPGACLRAGS*EHSWWR Trigger: CCTCCACCAGCTGTGTTCCCAGCTGCCCGCCCTGAG...GCAAGCACCAGGGGCAGTGGAAGAAGCATTGGGTCCTTGGACCTCTTGCTGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| CDS-3UTR CCA 90 bp | CCAAAGGACGACTCTGGCCCATCCTGGAGCCACTTCAATGAAGGTCCTCTCCCACTCAGGGCGGGCAGCTaGGAACACAGCTGGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PKDDSGPSWSHFNEGPLPLRAGS*EHSWWR Trigger: CCTCCACCAGCTGTGTTCCCAGCTGCCCGCCCTGAG...TGGGAGAGGACCTTCATTGAAGTGGCTCCAGGATGGGCCAGAGTCGTCCTTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR TCA 90 bp | GAAAACAGGCTGAGTGCATGTGGGGCATCCCTGGGTGACGCAGACACCGGCAGAATGACCCATAGCGCCTaGAGAGCCCATCCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ENRLSACGASLGDADTGRMTHSA*RAHPAP Trigger: AGGAGCTGGATGGGCTCTTCAGGCGCTATGGGTCAT...TCTGCCGGTGTCTGCGTCACCCAGGGATGCCCCACATGCACTCAGCCTGTTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119251.8 |
||
| CDS-3UTR GCA 90 bp | TCCTGGAGCCACTTCAATGAAGGTCCTCTCCCAAATCTCCCAGTACATGGCCAGGGCGGCTGGGGCTGCTaGCAGGCGGTGACATTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SWSHFNEGPLPNLPVHGQGGWGC*QAVTLP Trigger: AGGCAATGTCACCGCCTGGCAGCAGCCCCAGCCGCC...CTGGCCATGTACTGGGAGATTTGGGAGAGGACCTTCATTGAAGTGGCTCCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR GCA 90 bp | AAGGACGACTCTGGCCCATCCTGGAGCCACTTCAATGAAGGTCCTCTCCCAAATGGCGGCTGGGGCTGCTaGCAGGCGGTGACATTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KDDSGPSWSHFNEGPLPNGGWGC*QAVTLP Trigger: AGGCAATGTCACCGCCTGGCAGCAGCCCCAGCCGCC...ATTTGGGAGAGGACCTTCATTGAAGTGGCTCCAGGATGGGCCAGAGTCGTCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CCA 90 bp | ACAATTACAGTAGCAAGAGGGCAGGTTTGGGATGTGGCCTGGAGGTGGAGGGACTGTAGTGCTGGCTGCTaGGGGGACAGGAGCCGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TITVARGQVWDVAWRWRDCSAGC*GDRSRG Trigger: CCCACGGCTCCTGTCCCCCCAGCAGCCAGCACTACA...GTCCCTCCACCTCCAGGCCACATCCCAAACCTGCCCTCTTGCTACTGTAATTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CCA 90 bp | CCCCATTTGAGGTCTAGGTTCCCAGGGATCCATTTACCTGGCCAGCCAGAAGCCGGGGTGGTGAGCGAGTaGGTAGACTGGGAGACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PHLRSRFPGIHLPGQPEAGVVSE*VDWETP Trigger: TGGGGTCTCCCAGTCTACCCACTCGCTCACCACCCC...GGCTTCTGGCTGGCCAGGTAAATGGATCCCTGGGAACCTAGACCTCAAATGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| CDS-3UTR CCA 90 bp | AGTGTGATACGTATGCAGGAAGCTGGAGGGACCAGGATGGGTATTAGCCGTGAACTCAGCCTCAGGCTCTaGGGCTGGGCGCAGCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SVIRMQEAGGTRMGISRELSLRL*GWAQQA Trigger: GGCCTGCTGCGCCCAGCCCCAGAGCCTGAGGCTGAG...TTCACGGCTAATACCCATCCTGGTCCCTCCAGCTTCCTGCATACGTATCACACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR TCA 90 bp | AATGGTGGGGGCAAGAAAGGGGCAAGAGCATCCCTCTCTCTAAAGCGAGAATTCAGAGCAGCACCCACGTaGGGCAAGGGGCTGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NGGGKKGARASLSLKREFRAAPT*GKGLPG Trigger: CCCTGGCAGCCCCTTGCCTCACGTGGGTGCTGCTCT...GAATTCTCGCTTTAGAGAGAGGGATGCTCTTGCCCCTTTCTTGCCCCCACCATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGAGCCACTTCAATGAAGGTCCTCTCCCAAATCTCCCAGTACATGGCCAGCAGCGAGTGGGTAGACTaGGAGACCCCAAGGCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGATSMKVLSQISQYMASSEWVD*ETPRRW Trigger: CCAGCGCCTTGGGGTCTCCCAGTCTACCCACTCGCT...GCTGGCCATGTACTGGGAGATTTGGGAGAGGACCTTCATTGAAGTGGCTCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CCA 90 bp | TCCGTACATGGCAATCACAAGCCAGGTTTGCTTTCGGGAAGCAGATGGCAAACTCGGTTGTGGCGGTTGTaGCTGCTGGGGCGGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SVHGNHKPGLLSGSRWQTRLWRL*LLGRLG Trigger: CCCCAGCCGCCCCAGCAGCCACAACCGCCACAACCG...AGTTTGCCATCTGCTTCCCGAAAGCAAACCTGGCTTGTGATTGCCATGTACGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| CDS-3UTR CCA 90 bp | GAACCAAAGGACGACTCTGGCCCATCCTGGAGCCACTTCAATGAAGGTCCTCTCTGGGAACACAGCTGGTaGAGGAGGTGCAGGGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: EPKDDSGPSWSHFNEGPLWEHSW*RRCRAA Trigger: CGCAGCCCTGCACCTCCTCCACCAGCTGTGTTCCCA...GAGAGGACCTTCATTGAAGTGGCTCCAGGATGGGCCAGAGTCGTCCTTTGGTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CCA 90 bp | ACAATTACAGTAGCAAGAGGGCAGGTTTGGGATGTGGCCTGGAGGTGGAGGGACTGGGAACACAGCTGGTaGAGGAGGTGCAGGGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: TITVARGQVWDVAWRWRDWEHSW*RRCRAA Trigger: CGCAGCCCTGCACCTCCTCCACCAGCTGTGTTCCCA...GTCCCTCCACCTCCAGGCCACATCCCAAACCTGCCCTCTTGCTACTGTAATTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGGCAAGAAAGGGGCAAGAGCATCCCTCTCTCTAAAGCGAGAATTCGAATTCTCAGCCTCAGGCTCTaGGGCTGGGCGCAGCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: WGQERGKSIPLSKARIRILSLRL*GWAQQA Trigger: GGCCTGCTGCGCCCAGCCCCAGAGCCTGAGGCTGAG...AATTCGAATTCTCGCTTTAGAGAGAGGGATGCTCTTGCCCCTTTCTTGCCCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR TCA 90 bp | TCCGTACATGGCAATCACAAGCCAGGTTTGCTTTCGGGAAGCAGATGGCAAACTGGGGCTCTGCTCCAGTaGGTCCTCCCCATCCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SVHGNHKPGLLSGSRWQTGALLQ*VLPIRL Trigger: GAGCCGGATGGGGAGGACTCACTGGAGCAGAGCCCC...AGTTTGCCATCTGCTTCCCGAAAGCAAACCTGGCTTGTGATTGCCATGTACGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| CDS-3UTR CCA 90 bp | AGGATCAGAGAGTGTGATACGTATGCAGGAAGCTGGAGGGACCAGGATGGGTATGCTGGGTGTTGTGGGTaGGTGGGGGCGGAGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RIRECDTYAGSWRDQDGYAGCCG*VGAETW Trigger: CCAAGTCTCCGCCCCCACCCACCCACAACACCCAGC...ATACCCATCCTGGTCCCTCCAGCTTCCTGCATACGTATCACACTCTCTGATCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CCA 90 bp | GAACCAAAGGACGACTCTGGCCCATCCTGGAGCCACTTCAATGAAGGTCCTCTCTGCCACGGAAACCACTaGGGTGGTGAGCGAGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: EPKDDSGPSWSHFNEGPLCHGNH*GGERVG Trigger: ACCCACTCGCTCACCACCCCAGTGGTTTCCGTGGCA...GAGAGGACCTTCATTGAAGTGGCTCCAGGATGGGCCAGAGTCGTCCTTTGGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR TCA 90 bp | CCAAAGGACGACTCTGGCCCATCCTGGAGCCACTTCAATGAAGGTCCTCTCCCATGGGTCCGTAAGGGATaGTGTCACCAGGGAAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PKDDSGPSWSHFNEGPLPWVRKG*CHQGRS Trigger: ACTCCTTCCCTGGTGACATCATCCCTTACGGACCCA...TGGGAGAGGACCTTCATTGAAGTGGCTCCAGGATGGGCCAGAGTCGTCCTTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR TCA 90 bp | GAGCCCAGGATAAGGAGGGGGTGGGCGGTGAGATTGTCAACTCTTCATCAGGGATGGGTCCGTAAGGGATaGTGTCACCAGGGAAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: EPRIRRGWAVRLSTLHQGWVRKG*CHQGRS Trigger: ACTCCTTCCCTGGTGACATCATCCCTTACGGACCCA...TCCCTGATGAAGAGTTGACAATCTCACCGCCCACCCCCTCCTTATCCTGGGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR TCA 90 bp | CCAAAGGACGACTCTGGCCCATCCTGGAGCCACTTCAATGAAGGTCCTCTCCCATGGGGACACTGGTTCTaGCTTGATGCTGATGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PKDDSGPSWSHFNEGPLPWGHWF*LDADVG Trigger: CCCCACATCAGCATCAAGTCAGAACCAGTGTCCCCA...TGGGAGAGGACCTTCATTGAAGTGGCTCCAGGATGGGCCAGAGTCGTCCTTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR GCA 90 bp | GAAAACAGGCTGAGTGCATGTGGGGCATCCCTGGGTGACGCAGACACCGGCAGACTTTGTTTAGGCTGTTaGCATTGGCCACAGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ENRLSACGASLGDADTGRLCLGC*HWPQGG Trigger: TCCTCCCTGTGGCCAATGGCAACAGCCTAAACAAAG...TCTGCCGGTGTCTGCGTCACCCAGGGATGCCCCACATGCACTCAGCCTGTTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119251.8 |
||
| CDS-3UTR GCA 90 bp | AAAGGAAAAGCTGGGGGTAGGGTCCCAATTCACCACACCCAGTCCTTCTGTCCTGAGGAGGTGCAGGGCTaGGTTCACGACTTGGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: KGKAGGRVPIHHTQSFCPEEVQG*VHDLGT Trigger: TGTCCCCAAGTCGTGAACGCAGCCCTGCACCTCCTC...AGGACAGAAGGACTGGGTGTGGTGAATTGGGACCCTACCCCCAGCTTTTCCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGCCTCCATGTGCCCAGTAAGTACTCTTCTGGACACAGGTGCACAAAGCCACATCCAGCTCCTCACTaGCCCGCCGGTACTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RSLHVPSKYSSGHRCTKPHPAPH*PAGTCP Trigger: AGGACAAGTACCGGCGGGCCAGTGAGGAGCTGGATG...TGGCTTTGTGCACCTGTGTCCAGAAGAGTACTTACTGGGCACATGGAGGCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CCA 90 bp | TCCTCTCCCAAATCTCCCAGTACATGGCCAGCTTTCTTTAGGATTGGGGTAGGCCTGAGGTGGCTGCTGTaGCTGTGGCTGTGGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSPKSPSTWPAFFRIGVGLRWLL*LWLWWL Trigger: CAGCCACCACAGCCACAGCCACAGCAGCCACCTCAG...GCCTACCCCAATCCTAAAGAAAGCTGGCCATGTACTGGGAGATTTGGGAGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR TCA 90 bp | AGGAGCCTCCATGTGCCCAGTAAGTACTCTTCTGGACACAGGTGCACAAAGCCACAAACTTCCGCTTGGTaGAGGTCACCTGGCGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RSLHVPSKYSSGHRCTKPQTSAW*RSPGGS Trigger: GGAACCGCCAGGTGACCTTCACCAAGCGGAAGTTTG...TGGCTTTGTGCACCTGTGTCCAGAAGAGTACTTACTGGGCACATGGAGGCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR TCA 90 bp | TCCTGGAGCCACTTCAATGAAGGTCCTCTCCCAAATCTCCCAGTACATGGCCAGAGGGGAGGCCCTGGCTaGGTAAACTTGGTGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SWSHFNEGPLPNLPVHGQRGGPG*VNLVLP Trigger: TGGCAACACCAAGTTTACTCAGCCAGGGCCTCCCCT...CTGGCCATGTACTGGGAGATTTGGGAGAGGACCTTCATTGAAGTGGCTCCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR TCA 90 bp | AGTCCTTCTGTCCTCATCAGCCCTCTTTCTACAGCTGTCTCTCTCCATGTTATCTGGTGGCTGTGGCTGTaGCTGTGGCGGTTGTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SPSVLISPLSTAVSLHVIWWLWL*LWRLWR Trigger: CCGCCACAACCGCCACAGTCACAGCCACAGCCACCA...GATAACATGGAGAGAGACAGCTGTAGAAAGAGGGCTGATGAGGACAGAAGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR GCA 90 bp | AATGGTGGGGGCAAGAAAGGGGCAAGAGCATCCCTCTCTCTAAAGCGAGAATTCAGCTGGTGGAGGAGGTaGAGGGCTGCGTTCACGACT | + |
|
Preference number: 4 (lower is better) Translates to: NGGGKKGARASLSLKREFSWWRR*RAAFTT Trigger: AGTCGTGAACGCAGCCCTGCACCTCCTCCACCAGCT...GAATTCTCGCTTTAGAGAGAGGGATGCTCTTGCCCCTTTCTTGCCCCCACCATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTGATACGTATGCAGGAAGCTGGAGGGACCAGGATGGGTATTAGCCGTGAACATCCAGCTCCTCACTaGCCCGCCGGTACTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SVIRMQEAGGTRMGISREHPAPH*PAGTCP Trigger: AGGACAAGTACCGGCGGGCCAGTGAGGAGCTGGATG...TTCACGGCTAATACCCATCCTGGTCCCTCCAGCTTCCTGCATACGTATCACACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CCA 90 bp | AAGGACGACTCTGGCCCATCCTGGAGCCACTTCAATGAAGGTCCTCTCCCAAATCAGGCATGGCAAAGTTaGGGGCCGGAACAGATGACC | + |
|
Preference number: 4 (lower is better) Translates to: KDDSGPSWSHFNEGPLPNQAWQS*GPEQMT Trigger: GGTCATCTGTTCCGGCCCCCAACTTTGCCATGCCTG...ATTTGGGAGAGGACCTTCATTGAAGTGGCTCCAGGATGGGCCAGAGTCGTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CCA 90 bp | AATGGTGGGGGCAAGAAAGGGGCAAGAGCATCCCTCTCTCTAAAGCGAGAATTCGCACTAGCAGGCCGCTaGGGCAAGCCTGGAGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: NGGGKKGARASLSLKREFALAGR*GKPGET Trigger: TGTTTCTCCAGGCTTGCCCCAGCGGCCTGCTAGTGC...GAATTCTCGCTTTAGAGAGAGGGATGCTCTTGCCCCTTTCTTGCCCCCACCATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CCA 90 bp | TCCTGGAGCCACTTCAATGAAGGTCCTCTCCCAAATCTCCCAGTACATGGCCAGTTAGGCTGTTGCCATTaGCCACAGGGAGGAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SWSHFNEGPLPNLPVHGQLGCCH*PQGGGQ Trigger: CTGGCCTCCTCCCTGTGGCCAATGGCAACAGCCTAA...CTGGCCATGTACTGGGAGATTTGGGAGAGGACCTTCATTGAAGTGGCTCCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CCA 90 bp | ACAATTACAGTAGCAAGAGGGCAGGTTTGGGATGTGGCCTGGAGGTGGAGGGACAACCCTTTGCCTCCCTaGGAAGTGATGACCCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TITVARGQVWDVAWRWRDNPLPP*EVMTRR Trigger: TCTGCGGGTCATCACTTCCCAGGGAGGCAAAGGGTT...GTCCCTCCACCTCCAGGCCACATCCCAAACCTGCCCTCTTGCTACTGTAATTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCCAGGATAAGGAGGGGGTGGGCGGTGAGATTGTCAACTCTTCATCAGGGAATGCTGATGTGGGGGTaGGTAGTGACTGTGAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EPRIRRGWAVRLSTLHQGMLMWG*VVTVRA Trigger: TGCTCTCACAGTCACTACCCACCCCCACATCAGCAT...TCCCTGATGAAGAGTTGACAATCTCACCGCCCACCCCCTCCTTATCCTGGGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CCA 90 bp | GTGGGCGGTGAGATTGTCAACTCTTCATCAGGGAGGCTGAAAGGAGGGAGTGGGGACTTGATGCTGATGTaGGGGTGGGTAGTGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VGGEIVNSSSGRLKGGSGDLMLM*GWVVTV Trigger: CACAGTCACTACCCACCCCCACATCAGCATCAAGTC...CCCACTCCCTCCTTTCAGCCTCCCTGATGAAGAGTTGACAATCTCACCGCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR TCA 90 bp | TCTGGGAATGGGATGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTCTCTGGGCATTGTTCAAATaGTGCATTAACCCTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SGNGMGGLHMQGSAPVLLWALFK*CINPLP Trigger: AGGCAAAGGGTTAATGCATCATTTGAACAATGCCCA...GAGAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCATCCCATTCCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR TCA 90 bp | CCAGTCCTTCTGTCCTCATCAGCCCTCTTTCTACAGCTGTCTCTCTCCATGTTAAAGTGGGGCTGTTGCTaGGGTGGCTGCTGTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PVLLSSSALFLQLSLSMLKWGCC*GGCCGC Trigger: ACAGCCACAGCAGCCACCTCAGCAACAGCCCCACTT...TAACATGGAGAGAGACAGCTGTAGAAAGAGGGCTGATGAGGACAGAAGGACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR GCA 90 bp | TGGGGGCAAGAAAGGGGCAAGAGCATCCCTCTCTCTAAAGCGAGAATTCGAATTAGCTGGTGGAGGAGGTaGAGGGCTGCGTTCACGACT | + |
|
Preference number: 4 (lower is better) Translates to: WGQERGKSIPLSKARIRISWWRR*RAAFTT Trigger: AGTCGTGAACGCAGCCCTGCACCTCCTCCACCAGCT...AATTCGAATTCTCGCTTTAGAGAGAGGGATGCTCTTGCCCCTTTCTTGCCCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTCCTTCTGTCCTCATCAGCCCTCTTTCTACAGCTGTCTCTCTCCATGTTATGCCACGGAAACCACTaGGGTGGTGAGCGAGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PVLLSSSALFLQLSLSMLCHGNH*GGERVG Trigger: ACCCACTCGCTCACCACCCCAGTGGTTTCCGTGGCA...TAACATGGAGAGAGACAGCTGTAGAAAGAGGGCTGATGAGGACAGAAGGACTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CCA 90 bp | GAACCAAAGGACGACTCTGGCCCATCCTGGAGCCACTTCAATGAAGGTCCTCTCGAGAAGGGGAGGCCCTaGCTGAGTAAACTTGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: EPKDDSGPSWSHFNEGPLEKGRP*LSKLGV Trigger: AACACCAAGTTTACTCAGCCAGGGCCTCCCCTTCTC...GAGAGGACCTTCATTGAAGTGGCTCCAGGATGGGCCAGAGTCGTCCTTTGGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CCA 90 bp | GAACCAAAGGACGACTCTGGCCCATCCTGGAGCCACTTCAATGAAGGTCCTCTCATGCTGATGTGGGGGTaGGTAGTGACTGTGAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EPKDDSGPSWSHFNEGPLMLMWG*VVTVRA Trigger: TGCTCTCACAGTCACTACCCACCCCCACATCAGCAT...GAGAGGACCTTCATTGAAGTGGCTCCAGGATGGGCCAGAGTCGTCCTTTGGTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| 3UTR CAA 72 bp | GTAAACACACCCAGCTCACACAGAGGCCCTTGGAGCTaGAGTCACTCAAAGGTACATCCGCACAGCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: VNTPSSHRGPWS*SHSKVHPHSCT Trigger: TGTGCAGCTGTGCGGATGTACCTTTGAGTGACTCAAGCTCCAAGGGCCTCTGTGTGAGCTGGGTGTGTTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| CDS-3UTR TCA 90 bp | CCTGGAGCCACTTCAATGAAGGTCCTCTCCCAAATCTCCCAGTACATGGCCAGCGAGACTTGGCAGGGATaGCTTTGTTTAGGCTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PGATSMKVLSQISQYMASETWQG*LCLGCC Trigger: GCAACAGCCTAAACAAAGTCATCCCTGCCAAGTCTC...GCTGGCCATGTACTGGGAGATTTGGGAGAGGACCTTCATTGAAGTGGCTCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR TCA 90 bp | TTTTGGTTCTTTACGTCTATCTGGGAATGGGATGGGAGGGCTCCACATGCAGGGGCCCTGCAGGTGAACTaGAGGCTGGTAAGGAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: FWFFTSIWEWDGRAPHAGALQVN*RLVRRI Trigger: TATCCTCCTTACCAGCCTTCAGTTCACCTGCAGGGC...CCCTGCATGTGGAGCCCTCCCATCCCATTCCCAGATAGACGTAAAGAACCAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR TCA 90 bp | AATGGTGGGGGCAAGAAAGGGGCAAGAGCATCCCTCTCTCTAAAGCGAGAATTCTGGGGACACTGGTTCTaGCTTGATGCTGATGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NGGGKKGARASLSLKREFWGHWF*LDADVG Trigger: CCCCACATCAGCATCAAGTCAGAACCAGTGTCCCCA...GAATTCTCGCTTTAGAGAGAGGGATGCTCTTGCCCCTTTCTTGCCCCCACCATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CCA 90 bp | AGCTATTGCACTGTACATCTCAAAGGAAAAGCTGGGGGTAGGGTCCCAATTCACGCACTAGCAGGCCGCTaGGGCAAGCCTGGAGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: SYCTVHLKGKAGGRVPIHALAGR*GKPGET Trigger: TGTTTCTCCAGGCTTGCCCCAGCGGCCTGCTAGTGC...GTGAATTGGGACCCTACCCCCAGCTTTTCCTTTGAGATGTACAGTGCAATAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CCA 90 bp | ACCAGGATGGGTATTAGCCGTGAACAGCCCAGAAGCAGAAACTGCCTCCTCCTAGAGAAGGGGAGGCCCTaGCTGAGTAAACTTGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TRMGISREQPRSRNCLLLEKGRP*LSKLGV Trigger: AACACCAAGTTTACTCAGCCAGGGCCTCCCCTTCTC...TAGGAGGAGGCAGTTTCTGCTTCTGGGCTGTTCACGGCTAATACCCATCCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| 3UTR CAA 72 bp | ATCCCTTGTAAACACACCCAGCTCACACAGAGGCCCTaGGAGCTTGAGTCACTCAAAGGTACATCCGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: IPCKHTQLTQRP*ELESLKGTSAQ Trigger: CTGTGCGGATGTACCTTTGAGTGACTCAAGCTCCAAGGGCCTCTGTGTGAGCTGGGTGTGTTTACAAGGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| CDS-3UTR TCA 90 bp | TCCTGGAGCCACTTCAATGAAGGTCCTCTCCCAAATCTCCCAGTACATGGCCAGTGTACTCGGTGTACTTaGGCAGCACCTTGTCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: SWSHFNEGPLPNLPVHGQCTRCT*AAPCPC Trigger: ACATGGACAAGGTGCTGCTCAAGTACACCGAGTACA...CTGGCCATGTACTGGGAGATTTGGGAGAGGACCTTCATTGAAGTGGCTCCAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR TCA 90 bp | AGCTATTGCACTGTACATCTCAAAGGAAAAGCTGGGGGTAGGGTCCCAATTCACTGGACACGGGCACTGTaGCAGGCATGGCAAAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SYCTVHLKGKAGGRVPIHWTRAL*QAWQSW Trigger: CCAACTTTGCCATGCCTGTCACAGTGCCCGTGTCCA...GTGAATTGGGACCCTACCCCCAGCTTTTCCTTTGAGATGTACAGTGCAATAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR TCA 90 bp | TGGGGGCAAGAAAGGGGCAAGAGCATCCCTCTCTCTAAAGCGAGAATTCGAATTGCCCTGCAGGTGAACTaGAGGCTGGTAAGGAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: WGQERGKSIPLSKARIRIALQVN*RLVRRI Trigger: TATCCTCCTTACCAGCCTTCAGTTCACCTGCAGGGC...AATTCGAATTCTCGCTTTAGAGAGAGGGATGCTCTTGCCCCTTTCTTGCCCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CCA 90 bp | AGTCCTTCTGTCCTCATCAGCCCTCTTTCTACAGCTGTCTCTCTCCATGTTATCCAGGCATGGCAAAGTTaGGGGCCGGAACAGATGACC | + |
|
Preference number: 4 (lower is better) Translates to: SPSVLISPLSTAVSLHVIQAWQS*GPEQMT Trigger: GGTCATCTGTTCCGGCCCCCAACTTTGCCATGCCTG...GATAACATGGAGAGAGACAGCTGTAGAAAGAGGGCTGATGAGGACAGAAGGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CCA 90 bp | ACAATTACAGTAGCAAGAGGGCAGGTTTGGGATGTGGCCTGGAGGTGGAGGGACGACCAGAGAGCTACTTaGATTGCTGAACTGCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: TITVARGQVWDVAWRWRDDQRAT*IAELHG Trigger: TCCATGCAGTTCAGCAATCCAAGTAGCTCTCTGGTC...GTCCCTCCACCTCCAGGCCACATCCCAAACCTGCCCTCTTGCTACTGTAATTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTCCTTCTGTCCTCATCAGCCCTCTTTCTACAGCTGTCTCTCTCCATGTTACCGCTGGGGCAAGCCTaGAGAAACACTGTTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PVLLSSSALFLQLSLSMLPLGQA*RNTVSL Trigger: CAGAGAAACAGTGTTTCTCCAGGCTTGCCCCAGCGG...TAACATGGAGAGAGACAGCTGTAGAAAGAGGGCTGATGAGGACAGAAGGACTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGGCAAGAAAGGGGCAAGAGCATCCCTCTCTCTAAAGCGAGAATTCGAATTCCGCTGGGGCAAGCCTaGAGAAACACTGTTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WGQERGKSIPLSKARIRIPLGQA*RNTVSL Trigger: CAGAGAAACAGTGTTTCTCCAGGCTTGCCCCAGCGG...AATTCGAATTCTCGCTTTAGAGAGAGGGATGCTCTTGCCCCTTTCTTGCCCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CCA 90 bp | AGCTATTGCACTGTACATCTCAAAGGAAAAGCTGGGGGTAGGGTCCCAATTCACTTAGGCTGTTGCCATTaGCCACAGGGAGGAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SYCTVHLKGKAGGRVPIHLGCCH*PQGGGQ Trigger: CTGGCCTCCTCCCTGTGGCCAATGGCAACAGCCTAA...GTGAATTGGGACCCTACCCCCAGCTTTTCCTTTGAGATGTACAGTGCAATAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CCA 90 bp | AGGATCAGAGAGTGTGATACGTATGCAGGAAGCTGGAGGGACCAGGATGGGTATGACTTGATGCTGATGTaGGGGTGGGTAGTGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RIRECDTYAGSWRDQDGYDLMLM*GWVVTV Trigger: CACAGTCACTACCCACCCCCACATCAGCATCAAGTC...ATACCCATCCTGGTCCCTCCAGCTTCCTGCATACGTATCACACTCTCTGATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR TCA 90 bp | AATGGTGGGGGCAAGAAAGGGGCAAGAGCATCCCTCTCTCTAAAGCGAGAATTCTGTACTCGGTGTACTTaGGCAGCACCTTGTCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: NGGGKKGARASLSLKREFCTRCT*AAPCPC Trigger: ACATGGACAAGGTGCTGCTCAAGTACACCGAGTACA...GAATTCTCGCTTTAGAGAGAGGGATGCTCTTGCCCCTTTCTTGCCCCCACCATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR TCA 90 bp | GCCCTCTTTCTACAGCTGTCTCTCTCCATGTTATCTCTAGAGATTCCAACCTCAATGACCCATAGCGCCTaGAGAGCCCATCCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALFLQLSLSMLSLEIPTSMTHSA*RAHPAP Trigger: AGGAGCTGGATGGGCTCTTCAGGCGCTATGGGTCAT...TGAGGTTGGAATCTCTAGAGATAACATGGAGAGAGACAGCTGTAGAAAGAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR TCA 90 bp | AGTGTGATACGTATGCAGGAAGCTGGAGGGACCAGGATGGGTATTAGCCGTGAAGAGACTTGGCAGGGATaGCTTTGTTTAGGCTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SVIRMQEAGGTRMGISREETWQG*LCLGCC Trigger: GCAACAGCCTAAACAAAGTCATCCCTGCCAAGTCTC...TTCACGGCTAATACCCATCCTGGTCCCTCCAGCTTCCTGCATACGTATCACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CCA 90 bp | AGCTATTGCACTGTACATCTCAAAGGAAAAGCTGGGGGTAGGGTCCCAATTCACAACCCTTTGCCTCCCTaGGAAGTGATGACCCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SYCTVHLKGKAGGRVPIHNPLPP*EVMTRR Trigger: TCTGCGGGTCATCACTTCCCAGGGAGGCAAAGGGTT...GTGAATTGGGACCCTACCCCCAGCTTTTCCTTTGAGATGTACAGTGCAATAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR TCA 90 bp | TGTCAAAATACTACAAAAGGCTGGGTCACAGGTGGGCAAAGACCATCGTACTACAACTGCATGGAGCTCTaGTTGGACACGGGCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CQNTTKGWVTGGQRPSYYNCMEL*LDTGTV Trigger: CACAGTGCCCGTGTCCAATCAGAGCTCCATGCAGTT...GTAGTACGATGGTCTTTGCCCACCTGTGACCCAGCCTTTTGTAGTATTTTGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| CDS-3UTR GCA 90 bp | CTGCATAGCCCCAGGAGAAACCTGGGGATACTAAACTGCAGAAATGTCACATACCTTTGTTTAGGCTGTTaGCATTGGCCACAGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LHSPRRNLGILNCRNVTYLCLGC*HWPQGG Trigger: TCCTCCCTGTGGCCAATGGCAACAGCCTAAACAAAG...GTATGTGACATTTCTGCAGTTTAGTATCCCCAGGTTTCTCCTGGGGCTATGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| CDS-3UTR CCA 90 bp | ACAACAACAACAAACACAACAGTTTCCTGGACGGTTACACCACTAACATTTGAAGGGGTGGTGAGCGAGTaGGTAGACTGGGAGACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TTTTNTTVSWTVTPLTFEGVVSE*VDWETP Trigger: TGGGGTCTCCCAGTCTACCCACTCGCTCACCACCCC...TTCAAATGTTAGTGGTGTAACCGTCCAGGAAACTGTTGTGTTTGTTGTTGTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| 3UTR CAA 72 bp | TGCCTTACAAAAGGCAAAGCTCCGGGCAAGAAGAACTaGAGTTGGCTCCATAAACAAGTCAGAACTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CLTKGKAPGKKN*SWLHKQVRTPG Trigger: CCCTGGAGTTCTGACTTGTTTATGGAGCCAACTCAAGTTCTTCTTGCCCGGAGCTTTGCCTTTTGTAAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| CDS-3UTR TCA 90 bp | ACAACAAATATAGTGAAAGAGTTTTCAAACCAAACTCGTAAGAATCTCGAGGACGCTGCTGCCAGGCGGTaGCATTGCCTAGTGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TTNIVKEFSNQTRKNLEDAAARR*HCLVPA Trigger: GGCTGGCACTAGGCAATGTCACCGCCTGGCAGCAGC...GTCCTCGAGATTCTTACGAGTTTGGTTTGAAAACTCTTTCACTATATTTGTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| CDS-3UTR GCA 90 bp | ACAACAACAACAAACACAACAGTTTCCTGGACGGTTACACCACTAACATTTGAAGAGGAGGTGCAGGGCTaGGTTCACGACTTGGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: TTTTNTTVSWTVTPLTFEEEVQG*VHDLGT Trigger: TGTCCCCAAGTCGTGAACGCAGCCCTGCACCTCCTC...TTCAAATGTTAGTGGTGTAACCGTCCAGGAAACTGTTGTGTTTGTTGTTGTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR TCA 90 bp | ACAACAACAACAAACACAACAGTTTCCTGGACGGTTACACCACTAACATTTGAATGGACACGGGCACTGTaGCAGGCATGGCAAAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TTTTNTTVSWTVTPLTFEWTRAL*QAWQSW Trigger: CCAACTTTGCCATGCCTGTCACAGTGCCCGTGTCCA...TTCAAATGTTAGTGGTGTAACCGTCCAGGAAACTGTTGTGTTTGTTGTTGTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CCA 90 bp | ACAACAAATATAGTGAAAGAGTTTTCAAACCAAACTCGTAAGAATCTCGAGGACCTGAGGTGGCTGCTGTaGCTGTGGCTGTGGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TTNIVKEFSNQTRKNLEDLRWLL*LWLWWL Trigger: CAGCCACCACAGCCACAGCCACAGCAGCCACCTCAG...GTCCTCGAGATTCTTACGAGTTTGGTTTGAAAACTCTTTCACTATATTTGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
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| 3UTR CAA 72 bp | CAAGCCAGCTTTGGGTTTCAGTCCACTATCTGGGTTTaGTTGTTGGGTAGTTTTTGGTTCTTTACGTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: QASFGFQSTIWV*LLGSFWFFTSI Trigger: GATAGACGTAAAGAACCAAAAACTACCCAACAACAAAACCCAGATAGTGGACTGAAACCCAAAGCTGGCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| 3UTR CAA 72 bp | AGCTTTGGGTTTCAGTCCACTATCTGGGTTTTGTTGTaGGGTAGTTTTTGGTTCTTTACGTCTATCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SFGFQSTIWVLL*GSFWFFTSIWE Trigger: TTCCCAGATAGACGTAAAGAACCAAAAACTACCCAACAACAAAACCCAGATAGTGGACTGAAACCCAAAGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR TCA 90 bp | ACAACAAATATAGTGAAAGAGTTTTCAAACCAAACTCGTAAGAATCTCGAGGACTGGGCATTGTTCAAATaGTGCATTAACCCTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TTNIVKEFSNQTRKNLEDWALFK*CINPLP Trigger: AGGCAAAGGGTTAATGCATCATTTGAACAATGCCCA...GTCCTCGAGATTCTTACGAGTTTGGTTTGAAAACTCTTTCACTATATTTGTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| CDS CCA 90 bp | TCCAGCTGGGCTGCTGAGACCTTCGCCAGGCTCAGGGCGGGCAGCTaGGAACACAGCTGGTGGAGGAGGTGCAGGGCTGCGTTCACGACT | + |
|
Preference number: 5 (lower is better) Translates to: SSWAAETFARLRAGS*EHSWWRRCRAAFTT Trigger: AGTCGTGAACGCAGCCCTGCACCTCCTCCACCAGCTGTGTTCCCAGCTGCCCGCCCTGAGCCTGGCGAAGGTCTCAGCAGCCCAGCTGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001455.13 ENSMUST00000107558.9 ENSMUST00000107559.3 ENSMUST00000119251.8 |
||
| CDS-3UTR CAA 90 bp | ATGGGATGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTCTCCAAGGCCACCCGCAGATCAGGCTaGCGGCTGGGGGCTCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: MGWEGSTCRARHLSFSKATRRSG*RLGAPS Trigger: GCTTGGAGCCCCCAGCCGCAAGCCTGATCTGCGGGT...GGCCTTGGAGAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCATCCCAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS TCA 90 bp | CATCATCCCGGTCCCCGGTCTCATAGGATCCTCCAGCTGGGCTGCTaGGACCTTCGCCAGGCTCAGGGCGGGCAGCTGGGAACACAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HHPGPRSHRILQLGC*DLRQAQGGQLGTQL Trigger: CAGCTGTGTTCCCAGCTGCCCGCCCTGAGCCTGGCGAAGGTCTCAGCAGCCCAGCTGGAGGATCCTATGAGACCGGGGACCGGGATGATG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001455.13 ENSMUST00000107558.9 ENSMUST00000107559.3 ENSMUST00000119251.8 |
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| CDS CCA 90 bp | GAGACCTTCGCCAGGCTCAGGGCGGGCAGCTGGGAACACAGCTGGTaGAGGAGGTGCAGGGCTGCGTTCACGACTTGGGGACACTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ETFARLRAGSWEHSW*RRCRAAFTTWGHWF Trigger: GAACCAGTGTCCCCAAGTCGTGAACGCAGCCCTGCACCTCCTCCACCAGCTGTGTTCCCAGCTGCCCGCCCTGAGCCTGGCGAAGGTCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001455.13 ENSMUST00000107558.9 ENSMUST00000107559.3 ENSMUST00000119251.8 |
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| CDS TCA 90 bp | GGGATGAGGTTGCTGAGAGAAACGGGGACCAAGTGGGGCTGTTGCTaGGGTGGCTGCTGTGGCTGTGGCTGTGGTGGCTGTGGCTGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: GMRLLRETGTKWGCC*GGCCGCGCGGCGCD Trigger: GTCACAGCCACAGCCACCACAGCCACAGCCACAGCAGCCACCTCAGCAACAGCCCCACTTGGTCCCCGTTTCTCTCAGCAACCTCATCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001455.13 ENSMUST00000107558.9 ENSMUST00000107559.3 ENSMUST00000119251.8 |
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| CDS-3UTR CAA 90 bp | AAAGGAAAAGCTGGGGGTAGGGTCCCAATTCACCACACCCAGTCCTTCTGTCCTCTGGCCCGCCGGTACTaGTCCTCCAGCAGGGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KGKAGGRVPIHHTQSFCPLARRY*SSSRGL Trigger: GAGCCCCCTGCTGGAGGACAAGTACCGGCGGGCCAG...AGGACAGAAGGACTGGGTGTGGTGAATTGGGACCCTACCCCCAGCTTTTCCTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
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| CDS CCA 90 bp | TGGGGCAAGCCTGGAGAAACACTGTTTCTCTGTAGTGCTGGCTGCTaGGGGGACAGGAGCCGTGGGTCCGTAAGGGATGATGTCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WGKPGETLFLCSAGC*GDRSRGSVRDDVTR Trigger: CCTGGTGACATCATCCCTTACGGACCCACGGCTCCTGTCCCCCCAGCAGCCAGCACTACAGAGAAACAGTGTTTCTCCAGGCTTGCCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001455.13 ENSMUST00000107558.9 ENSMUST00000107559.3 ENSMUST00000119251.8 |
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| CDS-3UTR CAA 90 bp | TTTTGGTTCTTTACGTCTATCTGGGAATGGGATGGGAGGGCTCCACATGCAGGGTGGCGGTTGTGGCGGTaGTGGCTGCTGGGGCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FWFFTSIWEWDGRAPHAGWRLWR*WLLGRL Trigger: CAGCCGCCCCAGCAGCCACAACCGCCACAACCGCCA...CCCTGCATGTGGAGCCCTCCCATCCCATTCCCAGATAGACGTAAAGAACCAAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
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| CDS TCA 90 bp | TGGAGGAGGTGCAGGGCTGCGTTCACGACTTGGGGACACTGGTTCTaGCTTGATGCTGATGTGGGGGTGGGTAGTGACTGTGAGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: WRRCRAAFTTWGHWF*LDADVGVGSDCESS Trigger: GCTGCTCTCACAGTCACTACCCACCCCCACATCAGCATCAAGTCAGAACCAGTGTCCCCAAGTCGTGAACGCAGCCCTGCACCTCCTCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001455.13 ENSMUST00000107558.9 ENSMUST00000107559.3 ENSMUST00000119251.8 |
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| CDS CCA 90 bp | GGTGTTGCCACGGAAACCACTGGGGTGGTGAGCGAGTGGGTAGACTaGGAGACCCCAAGGCGCTGGGCATTGTTCAGATCTAAATGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GVATETTGVVSEWVD*ETPRRWALFRSKWS Trigger: GGACCATTTAGATCTGAACAATGCCCAGCGCCTTGGGGTCTCCCAGTCTACCCACTCGCTCACCACCCCAGTGGTTTCCGTGGCAACACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107559.3 |
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| CDS-3UTR CAA 90 bp | ATGGGATGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTCTCCAAGGCCAGCTTGTTGGAGTGGTaGAAGATGATGAGCGCGATC | + |
|
Preference number: 5 (lower is better) Translates to: MGWEGSTCRARHLSFSKASLLEW*KMMSAI Trigger: GATCGCGCTCATCATCTTCAACCACTCCAACAAGCT...GGCCTTGGAGAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCATCCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
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| CDS-3UTR CAA 90 bp | TCTGGGAATGGGATGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTCTCACTTTGTTTAGGCTGTaGCCATTGGCCACAGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SGNGMGGLHMQGSAPVLLTLFRL*PLATGR Trigger: CCTCCCTGTGGCCAATGGCAACAGCCTAAACAAAGT...GAGAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCATCCCATTCCCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
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| CDS-3UTR CAA 90 bp | AGGATCAGAGAGTGTGATACGTATGCAGGAAGCTGGAGGGACCAGGATGGGTATACCCGCAGATCAGGCTaGCGGCTGGGGGCTCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: RIRECDTYAGSWRDQDGYTRRSG*RLGAPS Trigger: GCTTGGAGCCCCCAGCCGCAAGCCTGATCTGCGGGT...ATACCCATCCTGGTCCCTCCAGCTTCCTGCATACGTATCACACTCTCTGATCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
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| CDS-3UTR CAA 90 bp | CCAAAGGACGACTCTGGCCCATCCTGGAGCCACTTCAATGAAGGTCCTCTCCCATTTAGGCTGTTGCCATaGGCCACAGGGAGGAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PKDDSGPSWSHFNEGPLPFRLLP*ATGRRP Trigger: TGGCCTCCTCCCTGTGGCCAATGGCAACAGCCTAAA...TGGGAGAGGACCTTCATTGAAGTGGCTCCAGGATGGGCCAGAGTCGTCCTTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
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| CDS-3UTR CAA 90 bp | AGTCCTTCTGTCCTCATCAGCCCTCTTTCTACAGCTGTCTCTCTCCATGTTATCTGGCGGTTGTGGCGGTaGTGGCTGCTGGGGCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SPSVLISPLSTAVSLHVIWRLWR*WLLGRL Trigger: CAGCCGCCCCAGCAGCCACAACCGCCACAACCGCCA...GATAACATGGAGAGAGACAGCTGTAGAAAGAGGGCTGATGAGGACAGAAGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS TCA 90 bp | GGAGTGACCAGAGAGCTACTTGGATTGCTGAACTGCATGGAGCTCTaGTTGGACACGGGCACTGTGACAGGCATGGCAAAGTTGGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GVTRELLGLLNCMEL*LDTGTVTGMAKLGA Trigger: GGCCCCCAACTTTGCCATGCCTGTCACAGTGCCCGTGTCCAATCAGAGCTCCATGCAGTTCAGCAATCCAAGTAGCTCTCTGGTCACTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000001455.13 ENSMUST00000107558.9 ENSMUST00000107559.3 ENSMUST00000119251.8 |
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| CDS-3UTR CAA 90 bp | ACAATTACAGTAGCAAGAGGGCAGGTTTGGGATGTGGCCTGGAGGTGGAGGGACAGTCCAAACTTCCGCTaGGTGAAGGTCACCTGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: TITVARGQVWDVAWRWRDSPNFR*VKVTWR Trigger: CCGCCAGGTGACCTTCACCAAGCGGAAGTTTGGACT...GTCCCTCCACCTCCAGGCCACATCCCAAACCTGCCCTCTTGCTACTGTAATTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CAA 90 bp | TGTCAAAATACTACAAAAGGCTGGGTCACAGGTGGGCAAAGACCATCGTACTACCTGGCCCGCCGGTACTaGTCCTCCAGCAGGGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CQNTTKGWVTGGQRPSYYLARRY*SSSRGL Trigger: GAGCCCCCTGCTGGAGGACAAGTACCGGCGGGCCAG...GTAGTACGATGGTCTTTGCCCACCTGTGACCCAGCCTTTTGTAGTATTTTGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| CDS-3UTR CAA 90 bp | ACCAGGATGGGTATTAGCCGTGAACAGCCCAGAAGCAGAAACTGCCTCCTCCTAACAGGCATGGCAAAGTaGGGGGCCGGAACAGATGAC | + |
|
Preference number: 5 (lower is better) Translates to: TRMGISREQPRSRNCLLLTGMAK*GAGTDD Trigger: GTCATCTGTTCCGGCCCCCAACTTTGCCATGCCTGT...TAGGAGGAGGCAGTTTCTGCTTCTGGGCTGTTCACGGCTAATACCCATCCTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CAA 90 bp | CCAAAGGACGACTCTGGCCCATCCTGGAGCCACTTCAATGAAGGTCCTCTCCCAAGAGAGCTACTTGGATaGCTGAACTGCATGGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PKDDSGPSWSHFNEGPLPRELLG*LNCMEL Trigger: GAGCTCCATGCAGTTCAGCAATCCAAGTAGCTCTCT...TGGGAGAGGACCTTCATTGAAGTGGCTCCAGGATGGGCCAGAGTCGTCCTTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CAA 90 bp | AATGGTGGGGGCAAGAAAGGGGCAAGAGCATCCCTCTCTCTAAAGCGAGAATTCTTTAGGCTGTTGCCATaGGCCACAGGGAGGAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: NGGGKKGARASLSLKREFFRLLP*ATGRRP Trigger: TGGCCTCCTCCCTGTGGCCAATGGCAACAGCCTAAA...GAATTCTCGCTTTAGAGAGAGGGATGCTCTTGCCCCTTTCTTGCCCCCACCATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CAA 90 bp | TCCGTACATGGCAATCACAAGCCAGGTTTGCTTTCGGGAAGCAGATGGCAAACTCTGCCAGGGATGAGGTaGCTGAGAGAAACGGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: SVHGNHKPGLLSGSRWQTLPGMR*LRETGT Trigger: GGTCCCCGTTTCTCTCAGCAACCTCATCCCTGGCAG...AGTTTGCCATCTGCTTCCCGAAAGCAAACCTGGCTTGTGATTGCCATGTACGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| CDS-3UTR CAA 90 bp | TCCGTACATGGCAATCACAAGCCAGGTTTGCTTTCGGGAAGCAGATGGCAAACTAGTCCAAACTTCCGCTaGGTGAAGGTCACCTGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SVHGNHKPGLLSGSRWQTSPNFR*VKVTWR Trigger: CCGCCAGGTGACCTTCACCAAGCGGAAGTTTGGACT...AGTTTGCCATCTGCTTCCCGAAAGCAAACCTGGCTTGTGATTGCCATGTACGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
||
| CDS-3UTR CAA 90 bp | TCCTGGAGCCACTTCAATGAAGGTCCTCTCCCAAATCTCCCAGTACATGGCCAGACTTTGTTTAGGCTGTaGCCATTGGCCACAGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SWSHFNEGPLPNLPVHGQTLFRL*PLATGR Trigger: CCTCCCTGTGGCCAATGGCAACAGCCTAAACAAAGT...CTGGCCATGTACTGGGAGATTTGGGAGAGGACCTTCATTGAAGTGGCTCCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CAA 90 bp | TGGGGGCAAGAAAGGGGCAAGAGCATCCCTCTCTCTAAAGCGAGAATTCGAATTGGTGGGGGCGGAGACTaGGCAGGGATGACTTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: WGQERGKSIPLSKARIRIGGGGD*AGMTLF Trigger: AAACAAAGTCATCCCTGCCAAGTCTCCGCCCCCACC...AATTCGAATTCTCGCTTTAGAGAGAGGGATGCTCTTGCCCCTTTCTTGCCCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
||
| CDS-3UTR CAA 90 bp | CCAGTCCTTCTGTCCTCATCAGCCCTCTTTCTACAGCTGTCTCTCTCCATGTTAGGTGGGGGCGGAGACTaGGCAGGGATGACTTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: PVLLSSSALFLQLSLSMLGGGGD*AGMTLF Trigger: AAACAAAGTCATCCCTGCCAAGTCTCCGCCCCCACC...TAACATGGAGAGAGACAGCTGTAGAAAGAGGGCTGATGAGGACAGAAGGACTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
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| CDS-3UTR CAA 90 bp | AGGAGCCTCCATGTGCCCAGTAAGTACTCTTCTGGACACAGGTGCACAAAGCCAAGAGAGCTACTTGGATaGCTGAACTGCATGGAGCTC | + |
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Preference number: 5 (lower is better) Translates to: RSLHVPSKYSSGHRCTKPRELLG*LNCMEL Trigger: GAGCTCCATGCAGTTCAGCAATCCAAGTAGCTCTCT...TGGCTTTGTGCACCTGTGTCCAGAAGAGTACTTACTGGGCACATGGAGGCTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
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| CDS TCA 90 bp | CCAAGGCGCTGGGCATTGTTCAGATCTAAATGGTCCTCAGTCAAATaGTGCATTAACCCTTTGCCTCCCTGGGAAGTGATGACCCGCAGA | + |
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Preference number: 5 (lower is better) Translates to: PRRWALFRSKWSSVK*CINPLPPWEVMTRR Trigger: TCTGCGGGTCATCACTTCCCAGGGAGGCAAAGGGTTAATGCATCATTTGACTGAGGACCATTTAGATCTGAACAATGCCCAGCGCCTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107559.3 |
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| CDS-3UTR CAA 90 bp | TGGGGGCAAGAAAGGGGCAAGAGCATCCCTCTCTCTAAAGCGAGAATTCGAATTAGCTTGTTGGAGTGGTaGAAGATGATGAGCGCGATC | + |
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Preference number: 5 (lower is better) Translates to: WGQERGKSIPLSKARIRISLLEW*KMMSAI Trigger: GATCGCGCTCATCATCTTCAACCACTCCAACAAGCT...AATTCGAATTCTCGCTTTAGAGAGAGGGATGCTCTTGCCCCTTTCTTGCCCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
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| CDS-3UTR CAA 90 bp | AGTGTGATACGTATGCAGGAAGCTGGAGGGACCAGGATGGGTATTAGCCGTGAATTGGCAGGGATGACTTaGTTTAGGCTGTTGCCATTG | + |
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Preference number: 5 (lower is better) Translates to: SVIRMQEAGGTRMGISRELAGMT*FRLLPL Trigger: CAATGGCAACAGCCTAAACAAAGTCATCCCTGCCAA...TTCACGGCTAATACCCATCCTGGTCCCTCCAGCTTCCTGCATACGTATCACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
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| CDS-3UTR CAA 90 bp | CTGCATAGCCCCAGGAGAAACCTGGGGATACTAAACTGCAGAAATGTCACATACTTGTACTCGGTGTACTaGAGCAGCACCTTGTCCATG | + |
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Preference number: 5 (lower is better) Translates to: LHSPRRNLGILNCRNVTYLYSVY*SSTLSM Trigger: CATGGACAAGGTGCTGCTCAAGTACACCGAGTACAA...GTATGTGACATTTCTGCAGTTTAGTATCCCCAGGTTTCTCCTGGGGCTATGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
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| CDS-3UTR CAA 90 bp | ACAACAACAACAAACACAACAGTTTCCTGGACGGTTACACCACTAACATTTGAACTGCCAGGGATGAGGTaGCTGAGAGAAACGGGGACC | + |
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Preference number: 5 (lower is better) Translates to: TTTTNTTVSWTVTPLTFELPGMR*LRETGT Trigger: GGTCCCCGTTTCTCTCAGCAACCTCATCCCTGGCAG...TTCAAATGTTAGTGGTGTAACCGTCCAGGAAACTGTTGTGTTTGTTGTTGTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001455.13 ENSMUST00000119251.8 |
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| CDS-3UTR CAA 90 bp | TGTCAAAATACTACAAAAGGCTGGGTCACAGGTGGGCAAAGACCATCGTACTACTTGGCAGGGATGACTTaGTTTAGGCTGTTGCCATTG | + |
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Preference number: 5 (lower is better) Translates to: CQNTTKGWVTGGQRPSYYLAGMT*FRLLPL Trigger: CAATGGCAACAGCCTAAACAAAGTCATCCCTGCCAA...GTAGTACGATGGTCTTTGCCCACCTGTGACCCAGCCTTTTGTAGTATTTTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001455.13 |
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| CDS TCA 72 bp | CAAAGTTGGGGGCCGGAACAGATGACCCATAGCGCCTaGAGAGCCCATCCAGCTCCTCACTGGCCCGCCGGT | + |
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Preference number: 6 (lower is better) Translates to: QSWGPEQMTHSA*RAHPAPHWPAG Trigger: ACCGGCGGGCCAGTGAGGAGCTGGATGGGCTCTTCAGGCGCTATGGGTCATCTGTTCCGGCCCCCAACTTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001455.13 ENSMUST00000107559.3 ENSMUST00000119251.8 |
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| CDS CCA 72 bp | GGTGTTGCCACGGAAACCACTGGGGTGGTGAGCGAGTaGGTAGACTGGGAGACCCCAAGGCGCTGGGCATTG | + |
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Preference number: 6 (lower is better) Translates to: GVATETTGVVSE*VDWETPRRWAL Trigger: CAATGCCCAGCGCCTTGGGGTCTCCCAGTCTACCCACTCGCTCACCACCCCAGTGGTTTCCGTGGCAACACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001455.13 ENSMUST00000107558.9 ENSMUST00000107559.3 ENSMUST00000119251.8 |
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| CDS CAA 72 bp | TTGCCTCCCTGGGAAGTGATGACCCGCAGATCAGGCTaGCGGCTGGGGGCTCCAAGCTGGGTGTTGTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: LPPWEVMTRRSG*RLGAPSWVLWV Trigger: CACCCACAACACCCAGCTTGGAGCCCCCAGCCGCAAGCCTGATCTGCGGGTCATCACTTCCCAGGGAGGCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000001455.13 ENSMUST00000107558.9 ENSMUST00000107559.3 ENSMUST00000119251.8 |
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| CDS CAA 90 bp | GTGGGTGGGGGCGGAGACTTGGCAGGGATGACTTTGTTTAGGCTGTaGCCATTGGCCACAGGGAGGAGGCCAGGGGAAGCTCGGGCACTG | + |
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Preference number: 6 (lower is better) Translates to: VGGGGDLAGMTLFRL*PLATGRRPGEARAL Trigger: CAGTGCCCGAGCTTCCCCTGGCCTCCTCCCTGTGGCCAATGGCAACAGCCTAAACAAAGTCATCCCTGCCAAGTCTCCGCCCCCACCCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001455.13 ENSMUST00000107558.9 ENSMUST00000107559.3 ENSMUST00000119251.8 |
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| CDS CAA 90 bp | GCCAGGGATGAGGTTGCTGAGAGAAACGGGGACCAAGTGGGGCTGTaGCTGAGGTGGCTGCTGTGGCTGTGGCTGTGGTGGCTGTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: ARDEVAERNGDQVGL*LRWLLWLWLWWLWL Trigger: CAGCCACAGCCACCACAGCCACAGCCACAGCAGCCACCTCAGCAACAGCCCCACTTGGTCCCCGTTTCTCTCAGCAACCTCATCCCTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001455.13 ENSMUST00000107558.9 ENSMUST00000107559.3 ENSMUST00000119251.8 |
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| CDS CAA 90 bp | CTGGGGGCTCCAAGCTGGGTGTTGTGGGTGGGTGGGGGCGGAGACTaGGCAGGGATGACTTTGTTTAGGCTGTTGCCATTGGCCACAGGG | + |
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Preference number: 6 (lower is better) Translates to: LGAPSWVLWVGGGGD*AGMTLFRLLPLATG Trigger: CCCTGTGGCCAATGGCAACAGCCTAAACAAAGTCATCCCTGCCAAGTCTCCGCCCCCACCCACCCACAACACCCAGCTTGGAGCCCCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000001455.13 ENSMUST00000107558.9 ENSMUST00000107559.3 ENSMUST00000119251.8 |
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| CDS CAA 72 bp | TCGTCCACCTCGGGGCTCTCACACTCCCTGTGCTTCTaGTGCAGCGCCTCGATGATGTCAGCATTGGTGCGG | + |
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Preference number: 6 (lower is better) Translates to: SSTSGLSHSLCF*CSASMMSALVR Trigger: CCGCACCAATGCTGACATCATCGAGGCGCTGCACAAGAAGCACAGGGAGTGTGAGAGCCCCGAGGTGGACGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107558.9 |
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| CDS CAA 90 bp | GGAGGTGCAGGGCTGCGTTCACGACTTGGGGACACTGGTTCTGACTaGATGCTGATGTGGGGGTGGGTAGTGACTGTGAGAGCAGCACCC | + |
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Preference number: 6 (lower is better) Translates to: GGAGLRSRLGDTGSD*MLMWGWVVTVRAAP Trigger: GGGTGCTGCTCTCACAGTCACTACCCACCCCCACATCAGCATCAAGTCAGAACCAGTGTCCCCAAGTCGTGAACGCAGCCCTGCACCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001455.13 ENSMUST00000107558.9 ENSMUST00000107559.3 ENSMUST00000119251.8 |
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| CDS GCA 72 bp | AACGCCTCGTCCACCTCGGGGCTCTCACACTCCCTGTaGTTCTTGTGCAGCGCCTCGATGATGTCAGCATTG | + |
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Preference number: 6 (lower is better) Translates to: NASSTSGLSHSL*FLCSASMMSAL Trigger: CAATGCTGACATCATCGAGGCGCTGCACAAGAAGCACAGGGAGTGTGAGAGCCCCGAGGTGGACGAGGCGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107558.9 |
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| CDS CCA 72 bp | ACGGAAACCACTGGGGTGGTGAGCGAGTGGGTAGACTaGGAGACCCCAAGGCGCTGGGCATTGTTCAGATCT | + |
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Preference number: 6 (lower is better) Translates to: TETTGVVSEWVD*ETPRRWALFRS Trigger: AGATCTGAACAATGCCCAGCGCCTTGGGGTCTCCCAGTCTACCCACTCGCTCACCACCCCAGTGGTTTCCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107559.3 |
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| CDS CAA 72 bp | GGCGGAGACTTGGCAGGGATGACTTTGTTTAGGCTGTaGCCATTGGCCACAGGGAGGAGGCCAGGGGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: GGDLAGMTLFRL*PLATGRRPGEA Trigger: AGCTTCCCCTGGCCTCCTCCCTGTGGCCAATGGCAACAGCCTAAACAAAGTCATCCCTGCCAAGTCTCCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001455.13 ENSMUST00000107558.9 ENSMUST00000107559.3 ENSMUST00000119251.8 |
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| CDS CCA 72 bp | TCTCCACCCAGCATGGCTCCTGCACTAGCAGGCCGCTaGGGCAAGCCTGGAGAAACACTGTTTCTCTGTAGT | + |
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Preference number: 6 (lower is better) Translates to: SPPSMAPALAGR*GKPGETLFLCS Trigger: ACTACAGAGAAACAGTGTTTCTCCAGGCTTGCCCCAGCGGCCTGCTAGTGCAGGAGCCATGCTGGGTGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001455.13 ENSMUST00000107558.9 ENSMUST00000107559.3 ENSMUST00000119251.8 |
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| CDS TCA 72 bp | TGCAGGGCTGCGTTCACGACTTGGGGACACTGGTTCTaGCTTGATGCTGATGTGGGGGTGGGTAGTGACTGT | + |
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Preference number: 6 (lower is better) Translates to: CRAAFTTWGHWF*LDADVGVGSDC Trigger: ACAGTCACTACCCACCCCCACATCAGCATCAAGTCAGAACCAGTGTCCCCAAGTCGTGAACGCAGCCCTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001455.13 ENSMUST00000107558.9 ENSMUST00000107559.3 ENSMUST00000119251.8 |
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| CDS TCA 72 bp | AGAGAGCTACTTGGATTGCTGAACTGCATGGAGCTCTaGTTGGACACGGGCACTGTGACAGGCATGGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: RELLGLLNCMEL*LDTGTVTGMAK Trigger: CTTTGCCATGCCTGTCACAGTGCCCGTGTCCAATCAGAGCTCCATGCAGTTCAGCAATCCAAGTAGCTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001455.13 ENSMUST00000107558.9 ENSMUST00000107559.3 ENSMUST00000119251.8 |
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| CDS TCA 72 bp | TGGGCATTGTTCAGATCTAAATGGTCCTCAGTCAAATaGTGCATTAACCCTTTGCCTCCCTGGGAAGTGATG | + |
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Preference number: 6 (lower is better) Translates to: WALFRSKWSSVK*CINPLPPWEVM Trigger: CATCACTTCCCAGGGAGGCAAAGGGTTAATGCATCATTTGACTGAGGACCATTTAGATCTGAACAATGCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107559.3 |
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