RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MEF2C (Mus musculus)

Ensembl gene IDs: ENSMUSG00000005583

Ensembl transcript IDs: ENSMUST00000005722.14, ENSMUST00000163888.8, ENSMUST00000185052.6, ENSMUST00000195904.5, ENSMUST00000195984.5, ENSMUST00000196493.5, ENSMUST00000196730.5, ENSMUST00000197145.2, ENSMUST00000197146.5, ENSMUST00000197681.5, ENSMUST00000197722.5, ENSMUST00000197938.5, ENSMUST00000198064.5, ENSMUST00000198199.5, ENSMUST00000198217.5, ENSMUST00000198360.2, ENSMUST00000199019.5, ENSMUST00000199105.5, ENSMUST00000199167.5, ENSMUST00000199210.5, ENSMUST00000199432.5, ENSMUST00000199450.5, ENSMUST00000200138.5, ENSMUST00000200394.5

Found 871 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AATCAACAGCCTCCACATATCAATGCGCACAGTCCACAGGCTGCATaGCTTGCGCCTGCTGCTCACCATGACCAGAATTTCTCAGCTCAC +
Preference number: 1 (lower is better)
Translates to: NQQPPHINAHSPQAA*LAPAAHHDQNFSAH
Trigger: GTGAGCTGAGAAATTCTGGTCATGGTGAGCAGCAGGCGCAAGCCATGCAGCCTGTGGACTGTGCGCATTGATATGTGGAGGCTGTTGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
3UTR CCA 90 bp GAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTaGATGTTAGGTGACAGGCGTGTTCCTACAATTACCGGTAGTCAC +
Preference number: 1 (lower is better)
Translates to: ECHTPMICLQVCERA*MLGDRRVPTITGSH
Trigger: GTGACTACCGGTAATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR GCA 90 bp GAATGGTTTCTGATCCTTTTGAATGAGTGCCATACGCCAATGATATaGCTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGT +
Preference number: 1 (lower is better)
Translates to: EWFLILLNECHTPMI*LQVCERAWMLGDRR
Trigger: ACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAAAAGGATCAGAAACCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR GCA 90 bp GTAGGTATGGTCCTCTCTGAATGGTTTCTGATCCTTTTGAATGAGTaGCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGG +
Preference number: 1 (lower is better)
Translates to: VGMVLSEWFLILLNE*HTPMICLQVCERAW
Trigger: CCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAAAAGGATCAGAAACCATTCAGAGAGGACCATACCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR GCA 90 bp CATGCCTGCAGTGACCCTTGCCTGCTTACTTCAAGAGTACACTGCTaGATTCAAACCACAACTAGAATCCAACACTTAGCGAACCTCTCT +
Preference number: 1 (lower is better)
Translates to: HACSDPCLLTSRVHC*IQTTTRIQHLANLS
Trigger: AGAGAGGTTCGCTAAGTGTTGGATTCTAGTTGTGGTTTGAATGCAGCAGTGTACTCTTGAAGTAAGCAGGCAAGGGTCACTGCAGGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
3UTR GCA 90 bp CTTCATGCCTGCAGTGACCCTTGCCTGCTTACTTCAAGAGTACACTaGTGCATTCAAACCACAACTAGAATCCAACACTTAGCGAACCTC +
Preference number: 1 (lower is better)
Translates to: LHACSDPCLLTSRVH*CIQTTTRIQHLANL
Trigger: GAGGTTCGCTAAGTGTTGGATTCTAGTTGTGGTTTGAATGCAGCAGTGTACTCTTGAAGTAAGCAGGCAAGGGTCACTGCAGGCATGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
3UTR GCA 90 bp GCAAACCATCTGAAGCAATCCAAGCTTCATGCCTGCAGTGACCCTTaGCTGCTTACTTCAAGAGTACACTGCTGCATTCAAACCACAACT +
Preference number: 1 (lower is better)
Translates to: ANHLKQSKLHACSDP*LLTSRVHCCIQTTT
Trigger: AGTTGTGGTTTGAATGCAGCAGTGTACTCTTGAAGTAAGCAGGCAAGGGTCACTGCAGGCATGAAGCTTGGATTGCTTCAGATGGTTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
3UTR GCA 90 bp AAAAACGATACGGCAAACCATCTGAAGCAATCCAAGCTTCATGCCTaGAGTGACCCTTGCCTGCTTACTTCAAGAGTACACTGCTGCATT +
Preference number: 1 (lower is better)
Translates to: KNDTANHLKQSKLHA*SDPCLLTSRVHCCI
Trigger: AATGCAGCAGTGTACTCTTGAAGTAAGCAGGCAAGGGTCACTGCAGGCATGAAGCTTGGATTGCTTCAGATGGTTTGCCGTATCGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
3UTR TCA 90 bp TTTGGGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCTaGCAACATTGTTATGGGTCAGTTAAAATCATGAAGGTGGATACC +
Preference number: 1 (lower is better)
Translates to: FGGPDTPGCSTVLYC*QHCYGSVKIMKVDT
Trigger: GGTATCCACCTTCATGATTTTAACTGACCCATAACAATGTTGTCAGCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCCCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR TCA 90 bp AATCTTCAAAATATCTCTAGTGGCAGGAAATTAATGCCATACAACTaGCGACACCGTAGCAGATGGCAGAGGCGGGAACAGATGAAGTAC +
Preference number: 1 (lower is better)
Translates to: NLQNISSGRKLMPYN*RHRSRWQRREQMKY
Trigger: GTACTTCATCTGTTCCCGCCTCTGCCATCTGCTACGGTGTCGTCAGTTGTATGGCATTAATTTCCTGCCACTAGAGATATTTTGAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
3UTR GCA 90 bp TTAGGTATACCATCTTGTCATCTAGTGGCGACAAAGTCCAGCTTATaGCGCTGTGAGCCTCTATTTGAATACTTGTTGCAAATGCTTGTA +
Preference number: 1 (lower is better)
Translates to: LGIPSCHLVATKSSL*RCEPLFEYLLQMLV
Trigger: TACAAGCATTTGCAACAAGTATTCAAATAGAGGCTCACAGCGGCATAAGCTGGACTTTGTCGCCACTAGATGACAAGATGGTATACCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
3UTR TCA 90 bp AGAAAAGGCAAGGGCAAAGACAAGACAGTGCCTGGTGATAGAACGTaGCTGGTCACAATAAAAATTGTGCTTCTCATTAAATCATCTCTA +
Preference number: 1 (lower is better)
Translates to: RKGKGKDKTVPGDRT*LVTIKIVLLIKSSL
Trigger: TAGAGATGATTTAATGAGAAGCACAATTTTTATTGTGACCAGTCACGTTCTATCACCAGGCACTGTCTTGTCTTTGCCCTTGCCTTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
3UTR CCA 90 bp AAAGAGAAAACAGTTATCTTGGTTAGCAAAGCATGGAGATCCTCATaGCTTAGGGTAGTGCTTTCTATACAAAAAGTCCTTGGTGGGTTT +
Preference number: 1 (lower is better)
Translates to: KEKTVILVSKAWRSS*LRVVLSIQKVLGGF
Trigger: AAACCCACCAAGGACTTTTTGTATAGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTTGCTAACCAAGATAACTGTTTTCTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR GCA 90 bp TGTGCAGGTAAGCATGTTTGTAAGGATGGTTTCCTGTTTTGCTTCTaGCTAAATACTCGTCTTCATGTTCCATTGATACCTTTAGTAGTA +
Preference number: 1 (lower is better)
Translates to: CAGKHVCKDGFLFCF*LNTRLHVPLIPLVV
Trigger: TACTACTAAAGGTATCAATGGAACATGAAGACGAGTATTTAGGCAGAAGCAAAACAGGAAACCATCCTTACAAACATGCTTACCTGCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
3UTR-3UTR TCA 90 bp GTTGCCCATCCTTCAGAGAGTCGCATGCGCTTGACTGAAGGACTTTCCCTTTCGCCGGCGAAGGTCTGGTaGGTCCAATGGGGGAGTGGA +
Preference number: 2 (lower is better)
Translates to: VAHPSESRMRLTEGLSLSPAKVW*VQWGSG
Trigger: TCCACTCCCCCATTGGACTCACCAGACCTTCGCCGG...CGAAAGGGAAAGTCCTTCAGTCAAGCGCATGCGACTCTCTGAAGGATGGGCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
3UTR-3UTR TCA 90 bp CAGAACTCTGTAACTTATCCATCAAGTAAAGCAGGTCGGTCGCCCCCAGGACCCATGCCTGCAGGTTTGTaGGCGTGCTTGGATGTTAGG +
Preference number: 2 (lower is better)
Translates to: QNSVTYPSSKAGRSPPGPMPAGL*ACLDVR
Trigger: CCTAACATCCAAGCACGCTCACAAACCTGCAGGCAT...GGGTCCTGGGGGCGACCGACCTGCTTTACTTGATGGATAAGTTACAGAGTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR TCA 90 bp GGCTTCTGCCACCCAGCGGCAGCCTTTTACAGTGAGAAACATGTATGTAGCAACGACATTTGGGGGTCCTaGCACACCAGGCTGTTCAAC +
Preference number: 2 (lower is better)
Translates to: GFCHPAAAFYSEKHVCSNDIWGS*HTRLFN
Trigger: GTTGAACAGCCTGGTGTGTCAGGACCCCCAAATGTC...GTTGCTACATACATGTTTCTCACTGTAAAAGGCTGCCGCTGGGTGGCAGAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
3UTR-3UTR TCA 90 bp GAAGTGACATTTGGGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCATGCCTGCAGGTTTGTaGGCGTGCTTGGATGTTAGG +
Preference number: 2 (lower is better)
Translates to: EVTFGGPDTPGCSTVLYCMPAGL*ACLDVR
Trigger: CCTAACATCCAAGCACGCTCACAAACCTGCAGGCAT...GCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCCCAAATGTCACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR TCA 90 bp CCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTGGAATTCGTTCCGGTaGTCCTCTCGGTCGCTCCCA +
Preference number: 2 (lower is better)
Translates to: PTITGSHHLPGLSKPLYIWNSFR*SSRSLP
Trigger: TGGGAGCGACCGAGAGGATCACCGGAACGAATTCCA...AATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197722.5
3UTR-3UTR TCA 90 bp GAAGTGACATTTGGGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCTCGCATGCGCTTGACTaGAGGACTTTCCCTTTCGTC +
Preference number: 2 (lower is better)
Translates to: EVTFGGPDTPGCSTVLYCSHALD*RTFPFV
Trigger: GACGAAAGGGAAAGTCCTTCAGTCAAGCGCATGCGA...GCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCCCAAATGTCACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000197722.5
3UTR-3UTR TCA 90 bp TCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTAACTTATCCATGCCTGCAGGTTTGTaGGCGTGCTTGGATGTTAGG +
Preference number: 2 (lower is better)
Translates to: SPAPRLSPCSPPELCNLSMPAGL*ACLDVR
Trigger: CCTAACATCCAAGCACGCTCACAAACCTGCAGGCAT...GGATAAGTTACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR TCA 90 bp GGCTTCTGCCACCCAGCGGCAGCCTTTTACAGTGAGAAACATGTATGTAGCAACTGCTTTAGGCAGAAGTaGCATTTGGGGGTCCTGACA +
Preference number: 2 (lower is better)
Translates to: GFCHPAAAFYSEKHVCSNCFRQK*HLGVLT
Trigger: TGTCAGGACCCCCAAATGTCACTTCTGCCTAAAGCA...GTTGCTACATACATGTTTCTCACTGTAAAAGGCTGCCGCTGGGTGGCAGAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
3UTR-3UTR TCA 90 bp CCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTATGCCTGCAGGTTTGTaGGCGTGCTTGGATGTTAGG +
Preference number: 2 (lower is better)
Translates to: PTITGSHHLPGLSKPLYIMPAGL*ACLDVR
Trigger: CCTAACATCCAAGCACGCTCACAAACCTGCAGGCAT...AATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR TCA 90 bp GCACGTCCTACACGTGACCTGGCAGGGCTAATGTTACTGCATTCTTTGTTCTGTTGCTTTAGGCAGAAGTaGCATTTGGGGGTCCTGACA +
Preference number: 2 (lower is better)
Translates to: ARPTRDLAGLMLLHSLFCCFRQK*HLGVLT
Trigger: TGTCAGGACCCCCAAATGTCACTTCTGCCTAAAGCA...ACAGAACAAAGAATGCAGTAACATTAGCCCTGCCAGGTCACGTGTAGGACGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
3UTR-3UTR TCA 90 bp CTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTAGAGTCGCATGCGCTTaGCTGAAGGACTTTCCCTTT +
Preference number: 2 (lower is better)
Translates to: LQVCERAWMLGDRRVPTIRVACA*LKDFPF
Trigger: AAAGGGAAAGTCCTTCAGTCAAGCGCATGCGACTCT...AATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197722.5
3UTR-3UTR CCA 90 bp TTTCCTTCCTCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTGCATGGAGATCCTCATaGCTTAGGGTAGTGCTTTCT +
Preference number: 2 (lower is better)
Translates to: FPSSPAPRLSPCSPPELCAWRSS*LRVVLS
Trigger: AGAAAGCACTACCCTAAGCCATGAGGATCTCCATGC...ACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGAGGAAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR CCA 90 bp GAAGTGACATTTGGGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCGCATGGAGATCCTCATaGCTTAGGGTAGTGCTTTCT +
Preference number: 2 (lower is better)
Translates to: EVTFGGPDTPGCSTVLYCAWRSS*LRVVLS
Trigger: AGAAAGCACTACCCTAAGCCATGAGGATCTCCATGC...GCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCCCAAATGTCACTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR CCA 90 bp CAGAACTCTGTAACTTATCCATCAAGTAAAGCAGGTCGGTCGCCCCCAGGACCCTTGGTTAGCAAAGCATaGAGATCCTCATGGCTTAGG +
Preference number: 2 (lower is better)
Translates to: QNSVTYPSSKAGRSPPGPLVSKA*RSSWLR
Trigger: CCTAAGCCATGAGGATCTCCATGCTTTGCTAACCAA...GGGTCCTGGGGGCGACCGACCTGCTTTACTTGATGGATAAGTTACAGAGTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR TCA 90 bp ATCCTTTTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTATGCCTGCAGGTTTGTaGGCGTGCTTGGATGTTAGG +
Preference number: 2 (lower is better)
Translates to: ILLNECHTPMICLQVCERMPAGL*ACLDVR
Trigger: CCTAACATCCAAGCACGCTCACAAACCTGCAGGCAT...ACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAAAAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR TCA 90 bp CCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTAGTGCCATACGCCAATaGTATGCCTGCAGGTTTGTG +
Preference number: 2 (lower is better)
Translates to: PTITGSHHLPGLSKPLYISAIRQ*YACRFV
Trigger: CACAAACCTGCAGGCATATCATTGGCGTATGGCACT...AATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR TCA 90 bp CAGAACTCTGTAACTTATCCATCAAGTAAAGCAGGTCGGTCGCCCCCAGGACCCCACAGCTTATCCTTTTaGCAGCTGACCTTGAACTTA +
Preference number: 2 (lower is better)
Translates to: QNSVTYPSSKAGRSPPGPHSLSF*QLTLNL
Trigger: TAAGTTCAAGGTCAGCTGTCAAAAGGATAAGCTGTG...GGGTCCTGGGGGCGACCGACCTGCTTTACTTGATGGATAAGTTACAGAGTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR TCA 90 bp GGCTTCTGCCACCCAGCGGCAGCCTTTTACAGTGAGAAACATGTATGTAGCAACACAATGGATGTCAGTTaGCCCAATAGTTTGCTGACG +
Preference number: 2 (lower is better)
Translates to: GFCHPAAAFYSEKHVCSNTMDVS*PNSLLT
Trigger: CGTCAGCAAACTATTGGGTCAACTGACATCCATTGT...GTTGCTACATACATGTTTCTCACTGTAAAAGGCTGCCGCTGGGTGGCAGAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
3UTR-3UTR GCA 90 bp TCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTAACTTATCCCATACGCCAATGATATaGCTGCAGGTTTGTGAGCGT +
Preference number: 2 (lower is better)
Translates to: SPAPRLSPCSPPELCNLSHTPMI*LQVCER
Trigger: ACGCTCACAAACCTGCAGGCATATCATTGGCGTATG...GGATAAGTTACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR CCA 90 bp TTTCCTTCCTCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTTTGGTTAGCAAAGCATaGAGATCCTCATGGCTTAGG +
Preference number: 2 (lower is better)
Translates to: FPSSPAPRLSPCSPPELCLVSKA*RSSWLR
Trigger: CCTAAGCCATGAGGATCTCCATGCTTTGCTAACCAA...ACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGAGGAAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR CCA 90 bp GAAGTGACATTTGGGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCTTGGTTAGCAAAGCATaGAGATCCTCATGGCTTAGG +
Preference number: 2 (lower is better)
Translates to: EVTFGGPDTPGCSTVLYCLVSKA*RSSWLR
Trigger: CCTAAGCCATGAGGATCTCCATGCTTTGCTAACCAA...GCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCCCAAATGTCACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR TCA 90 bp GTTATCTTGGTTAGCAAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTATGCCTGCAGGTTTGTaGGCGTGCTTGGATGTTAGG +
Preference number: 2 (lower is better)
Translates to: VILVSKAWRSSWLRVVLSMPAGL*ACLDVR
Trigger: CCTAACATCCAAGCACGCTCACAAACCTGCAGGCAT...AGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTTGCTAACCAAGATAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR TCA 90 bp ATCCTTTTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTAGTGCCATACGCCAATaGTATGCCTGCAGGTTTGTG +
Preference number: 2 (lower is better)
Translates to: ILLNECHTPMICLQVCERSAIRQ*YACRFV
Trigger: CACAAACCTGCAGGCATATCATTGGCGTATGGCACT...ACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAAAAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR TCA 90 bp GAAGTGACATTTGGGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCAGGTATGGTCCTCTCTaGATGGTTTCTGATCCTTTT +
Preference number: 2 (lower is better)
Translates to: EVTFGGPDTPGCSTVLYCRYGPL*MVSDPF
Trigger: AAAAGGATCAGAAACCATTCAGAGAGGACCATACCT...GCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCCCAAATGTCACTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR TCA 90 bp TTTCCTTCCTCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTAGGTATGGTCCTCTCTaGATGGTTTCTGATCCTTTT +
Preference number: 2 (lower is better)
Translates to: FPSSPAPRLSPCSPPELCRYGPL*MVSDPF
Trigger: AAAAGGATCAGAAACCATTCAGAGAGGACCATACCT...ACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGAGGAAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR TCA 90 bp TCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTAACTTATCCACAATGGATGTCAGTTaGCCCAATAGTTTGCTGACG +
Preference number: 2 (lower is better)
Translates to: SPAPRLSPCSPPELCNLSTMDVS*PNSLLT
Trigger: CGTCAGCAAACTATTGGGTCAACTGACATCCATTGT...GGATAAGTTACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR TCA 90 bp GGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCTGACAACATTGTTACAATGGATGTCAGTTaGCCCAATAGTTTGCTGACG +
Preference number: 2 (lower is better)
Translates to: GVLTHQAVQQSYTADNIVTMDVS*PNSLLT
Trigger: CGTCAGCAAACTATTGGGTCAACTGACATCCATTGT...AACAATGTTGTCAGCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR TCA 90 bp CAGAACTCTGTAACTTATCCATCAAGTAAAGCAGGTCGGTCGCCCCCAGGACCCGGTCAGTTAAAATCATaGAGGTGGATACCAAGTAAC +
Preference number: 2 (lower is better)
Translates to: QNSVTYPSSKAGRSPPGPGQLKS*RWIPSN
Trigger: GTTACTTGGTATCCACCTTCATGATTTTAACTGACC...GGGTCCTGGGGGCGACCGACCTGCTTTACTTGATGGATAAGTTACAGAGTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR CCA 90 bp GGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCTGACAACATTGTTTTGGTTAGCAAAGCATaGAGATCCTCATGGCTTAGG +
Preference number: 2 (lower is better)
Translates to: GVLTHQAVQQSYTADNIVLVSKA*RSSWLR
Trigger: CCTAAGCCATGAGGATCTCCATGCTTTGCTAACCAA...AACAATGTTGTCAGCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR TCA 90 bp GTTATCTTGGTTAGCAAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTAGTGCCATACGCCAATaGTATGCCTGCAGGTTTGTG +
Preference number: 2 (lower is better)
Translates to: VILVSKAWRSSWLRVVLSSAIRQ*YACRFV
Trigger: CACAAACCTGCAGGCATATCATTGGCGTATGGCACT...AGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTTGCTAACCAAGATAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR TCA 90 bp TCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTAACTTATCCAGGTATGGTCCTCTCTaGATGGTTTCTGATCCTTTT +
Preference number: 2 (lower is better)
Translates to: SPAPRLSPCSPPELCNLSRYGPL*MVSDPF
Trigger: AAAAGGATCAGAAACCATTCAGAGAGGACCATACCT...GGATAAGTTACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR TCA 90 bp GGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCTGACAACATTGTTCACAGCTTATCCTTTTaGCAGCTGACCTTGAACTTA +
Preference number: 2 (lower is better)
Translates to: GVLTHQAVQQSYTADNIVHSLSF*QLTLNL
Trigger: TAAGTTCAAGGTCAGCTGTCAAAAGGATAAGCTGTG...AACAATGTTGTCAGCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR TCA 90 bp GGCTTCTGCCACCCAGCGGCAGCCTTTTACAGTGAGAAACATGTATGTAGCAACGGTCAGTTAAAATCATaGAGGTGGATACCAAGTAAC +
Preference number: 2 (lower is better)
Translates to: GFCHPAAAFYSEKHVCSNGQLKS*RWIPSN
Trigger: GTTACTTGGTATCCACCTTCATGATTTTAACTGACC...GTTGCTACATACATGTTTCTCACTGTAAAAGGCTGCCGCTGGGTGGCAGAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
3UTR-3UTR GCA 90 bp ATCCCCCAGAGCTCTGCCCTAGACTTCTCAATACAAAGAACTTGGTGTGATCAACATACGCCAATGATATaGCTGCAGGTTTGTGAGCGT +
Preference number: 2 (lower is better)
Translates to: IPQSSALDFSIQRTWCDQHTPMI*LQVCER
Trigger: ACGCTCACAAACCTGCAGGCATATCATTGGCGTATG...TTGATCACACCAAGTTCTTTGTATTGAGAAGTCTAGGGCAGAGCTCTGGGGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
3UTR-3UTR GCA 90 bp CTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTCATACGCCAATGATATaGCTGCAGGTTTGTGAGCGT +
Preference number: 2 (lower is better)
Translates to: LQLPVVTTCRVCPNLYTFHTPMI*LQVCER
Trigger: ACGCTCACAAACCTGCAGGCATATCATTGGCGTATG...AAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR GCA 90 bp TTTCCTTCCTCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTATCCTTTTGAATGAGTaGCATACGCCAATGATATGC +
Preference number: 2 (lower is better)
Translates to: FPSSPAPRLSPCSPPELCILLNE*HTPMIC
Trigger: GCATATCATTGGCGTATGGCACTCATTCAAAAGGAT...ACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGAGGAAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR CCA 90 bp ACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGAAGATCTGCCGCTTTTaGCAAATGTTTCCTTTTGTC +
Preference number: 2 (lower is better)
Translates to: TPMICLQVCERAWMLGDRKICRF*QMFPFV
Trigger: GACAAAAGGAAACATTTGCCAAAAGCGGCAGATCTT...CCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CCA 90 bp CAAGGCAGGCTAGCATCCTATATGGATACCACCAAAGGTGCATTGTGGTCTAATGCATGGAGATCCTCATaGCTTAGGGTAGTGCTTTCT +
Preference number: 2 (lower is better)
Translates to: QGRLASYMDTTKGALWSNAWRSS*LRVVLS
Trigger: AGAAAGCACTACCCTAAGCCATGAGGATCTCCATGC...ATTAGACCACAATGCACCTTTGGTGGTATCCATATAGGATGCTAGCCTGCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
3UTR-3UTR TCA 90 bp CAAGGCAGGCTAGCATCCTATATGGATACCACCAAAGGTGCATTGTGGTCTAATACAATGGATGTCAGTTaGCCCAATAGTTTGCTGACG +
Preference number: 2 (lower is better)
Translates to: QGRLASYMDTTKGALWSNTMDVS*PNSLLT
Trigger: CGTCAGCAAACTATTGGGTCAACTGACATCCATTGT...ATTAGACCACAATGCACCTTTGGTGGTATCCATATAGGATGCTAGCCTGCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
3UTR-3UTR TCA 90 bp CTTCCTCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTAACTTTCCAAGATGTATGGTaGAATGAAGAGAGATCTGAA +
Preference number: 2 (lower is better)
Translates to: LPLQHPGFHLVLLQNSVTFQDVW*NEERSE
Trigger: TTCAGATCTCTCTTCATTTCACCATACATCTTGGAA...AGTTACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGAGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR TCA 90 bp TTTCCTTCCTCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTTTCCAAGATGTATGGTaGAATGAAGAGAGATCTGAA +
Preference number: 2 (lower is better)
Translates to: FPSSPAPRLSPCSPPELCFQDVW*NEERSE
Trigger: TTCAGATCTCTCTTCATTTCACCATACATCTTGGAA...ACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGAGGAAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR TCA 90 bp GGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCTGACAACATTGTTGGTCAGTTAAAATCATaGAGGTGGATACCAAGTAAC +
Preference number: 2 (lower is better)
Translates to: GVLTHQAVQQSYTADNIVGQLKS*RWIPSN
Trigger: GTTACTTGGTATCCACCTTCATGATTTTAACTGACC...AACAATGTTGTCAGCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR GCA 90 bp GTTATCTTGGTTAGCAAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTCATACGCCAATGATATaGCTGCAGGTTTGTGAGCGT +
Preference number: 2 (lower is better)
Translates to: VILVSKAWRSSWLRVVLSHTPMI*LQVCER
Trigger: ACGCTCACAAACCTGCAGGCATATCATTGGCGTATG...AGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTTGCTAACCAAGATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR GCA 90 bp TCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTAACTTATCCATCCTTTTGAATGAGTaGCATACGCCAATGATATGC +
Preference number: 2 (lower is better)
Translates to: SPAPRLSPCSPPELCNLSILLNE*HTPMIC
Trigger: GCATATCATTGGCGTATGGCACTCATTCAAAAGGAT...GGATAAGTTACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR CCA 90 bp CAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTACCAAGATCTGCCGCTTTTaGCAAATGTTTCCTTTTGTC +
Preference number: 2 (lower is better)
Translates to: QVCERAWMLGDRRVPTITKICRF*QMFPFV
Trigger: GACAAAAGGAAACATTTGCCAAAAGCGGCAGATCTT...GGTAATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CCA 90 bp GAAGTGACATTTGGGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCACAAAAAGTCCTTGGTaGGTTTTTACAGGACTGTTT +
Preference number: 2 (lower is better)
Translates to: EVTFGGPDTPGCSTVLYCTKSPW*VFTGLF
Trigger: AAACAGTCCTGTAAAAACCCACCAAGGACTTTTTGT...GCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCCCAAATGTCACTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR CAA 90 bp TCTGGCTTACGATTATTCATTCCTAGATTCATAGGGGGAGGAGATTaGGCTTGTATATTCTTGTTCAGGTTACCAGGTGAGACCAGCAGG +
Preference number: 2 (lower is better)
Translates to: SGLRLFIPRFIGGGD*ACIFLFRLPGETSR
Trigger: CCTGCTGGTCTCACCTGGTAACCTGAACAAGAATATACAAGCCAAATCTCCTCCCCCTATGAATCTAGGAATGAATAATCGTAAGCCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000198360.2
3UTR-3UTR TCA 90 bp GGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCTGACAACATTGTTAAAGGGTCACAACAGTaGAAAGAAGTTAGCCTTAAA +
Preference number: 2 (lower is better)
Translates to: GVLTHQAVQQSYTADNIVKGSQQ*KEVSLK
Trigger: TTTAAGGCTAACTTCTTTTCACTGTTGTGACCCTTT...AACAATGTTGTCAGCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR TCA 90 bp CTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTAAAGGGTCACAACAGTaGAAAGAAGTTAGCCTTAAA +
Preference number: 2 (lower is better)
Translates to: LQVCERAWMLGDRRVPTIKGSQQ*KEVSLK
Trigger: TTTAAGGCTAACTTCTTTTCACTGTTGTGACCCTTT...AATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR TCA 90 bp CCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCTCTGAAATGCCTGCAGGTTTGTaGGCGTGCTTGGATGTTAGG +
Preference number: 2 (lower is better)
Translates to: PFLSFLLFSFKVGMVLSEMPAGL*ACLDVR
Trigger: CCTAACATCCAAGCACGCTCACAAACCTGCAGGCAT...TTCAGAGAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR TCA 90 bp CCCTTTCCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCAGTGCCATACGCCAATaGTATGCCTGCAGGTTTGTG +
Preference number: 2 (lower is better)
Translates to: PFPFLSFLLFSFKVGMVLSAIRQ*YACRFV
Trigger: CACAAACCTGCAGGCATATCATTGGCGTATGGCACT...GAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGGAAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR TCA 90 bp TATATGGATACCACCAAAGGTGCATTGTGGTCTAATTCTGGATTGCAGATCAAGAGTGCCATACGCCAATaGTATGCCTGCAGGTTTGTG +
Preference number: 2 (lower is better)
Translates to: YMDTTKGALWSNSGLQIKSAIRQ*YACRFV
Trigger: CACAAACCTGCAGGCATATCATTGGCGTATGGCACT...CTTGATCTGCAATCCAGAATTAGACCACAATGCACCTTTGGTGGTATCCATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
3UTR-3UTR TCA 90 bp CTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTCTGATCCTTTTGAATaGGTGCCATACGCCAATGAT +
Preference number: 2 (lower is better)
Translates to: LQLPVVTTCRVCPNLYTFSDPFE*VPYAND
Trigger: ATCATTGGCGTATGGCACTCATTCAAAAGGATCAGA...AAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR TCA 90 bp CAAGGCAGGCTAGCATCCTATATGGATACCACCAAAGGTGCATTGTGGTCTAATACAGTCCTATACTGCTaGCAACATTGTTATGGGTCA +
Preference number: 2 (lower is better)
Translates to: QGRLASYMDTTKGALWSNTVLYC*QHCYGS
Trigger: TGACCCATAACAATGTTGTCAGCAGTATAGGACTGT...ATTAGACCACAATGCACCTTTGGTGGTATCCATATAGGATGCTAGCCTGCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
3UTR-3UTR GCA 90 bp GGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCTGACAACATTGTTCTTTCAGTAAAGATCTaGCGCTTTTGGCAAATGTTT +
Preference number: 2 (lower is better)
Translates to: GVLTHQAVQQSYTADNIVLSVKI*RFWQMF
Trigger: AAACATTTGCCAAAAGCGGCAGATCTTTACTGAAAG...AACAATGTTGTCAGCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR CCA 90 bp GAAGTGACATTTGGGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCAGAAAACAGTTATCTTaGTTAGCAAAGCATGGAGAT +
Preference number: 2 (lower is better)
Translates to: EVTFGGPDTPGCSTVLYCRKQLS*LAKHGD
Trigger: ATCTCCATGCTTTGCTAACCAAGATAACTGTTTTCT...GCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCCCAAATGTCACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR CCA 90 bp GGCTTCTGCCACCCAGCGGCAGCCTTTTACAGTGAGAAACATGTATGTAGCAACAGAAAACAGTTATCTTaGTTAGCAAAGCATGGAGAT +
Preference number: 2 (lower is better)
Translates to: GFCHPAAAFYSEKHVCSNRKQLS*LAKHGD
Trigger: ATCTCCATGCTTTGCTAACCAAGATAACTGTTTTCT...GTTGCTACATACATGTTTCTCACTGTAAAAGGCTGCCGCTGGGTGGCAGAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
3UTR-3UTR CCA 90 bp TTTCCTTCCTCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTAGAAAACAGTTATCTTaGTTAGCAAAGCATGGAGAT +
Preference number: 2 (lower is better)
Translates to: FPSSPAPRLSPCSPPELCRKQLS*LAKHGD
Trigger: ATCTCCATGCTTTGCTAACCAAGATAACTGTTTTCT...ACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGAGGAAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR CCA 90 bp AGAGTACACTGCTGCATTCAAACCACAACTAGAATCCAACACTTAGCGAACCTCGGATGGAATCAAGTCTaGCGTGAAATAATGGCTGAC +
Preference number: 2 (lower is better)
Translates to: RVHCCIQTTTRIQHLANLGWNQV*REIMAD
Trigger: GTCAGCCATTATTTCACGCCAGACTTGATTCCATCC...GAGGTTCGCTAAGTGTTGGATTCTAGTTGTGGTTTGAATGCAGCAGTGTACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
3UTR CAA 90 bp TCTTTTAAGGTAGGTATGGTCCTCTCTGAATGGTTTCTGATCCTTTaGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAG +
Preference number: 2 (lower is better)
Translates to: SFKVGMVLSEWFLIL*NECHTPMICLQVCE
Trigger: CTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAAAAGGATCAGAAACCATTCAGAGAGGACCATACCTACCTTAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR TCA 90 bp CCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCTCTGAAAGTGCCATACGCCAATaGTATGCCTGCAGGTTTGTG +
Preference number: 2 (lower is better)
Translates to: PFLSFLLFSFKVGMVLSESAIRQ*YACRFV
Trigger: CACAAACCTGCAGGCATATCATTGGCGTATGGCACT...TTCAGAGAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR TCA 90 bp AGCTTGCAGGACTTAGGCTCCAACACAGCTTCTTACTCTGGGCATATTTCTAAACACAGCTTATCCTTTTaGCAGCTGACCTTGAACTTA +
Preference number: 2 (lower is better)
Translates to: SLQDLGSNTASYSGHISKHSLSF*QLTLNL
Trigger: TAAGTTCAAGGTCAGCTGTCAAAAGGATAAGCTGTG...TTTAGAAATATGCCCAGAGTAAGAAGCTGTGTTGGAGCCTAAGTCCTGCAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR GCA 90 bp ATCCTTTTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTATCCTTTTGAATGAGTaGCATACGCCAATGATATGC +
Preference number: 2 (lower is better)
Translates to: ILLNECHTPMICLQVCERILLNE*HTPMIC
Trigger: GCATATCATTGGCGTATGGCACTCATTCAAAAGGAT...ACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAAAAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR GCA 90 bp CTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTATCCTTTTGAATGAGTaGCATACGCCAATGATATGC +
Preference number: 2 (lower is better)
Translates to: LQLPVVTTCRVCPNLYTFILLNE*HTPMIC
Trigger: GCATATCATTGGCGTATGGCACTCATTCAAAAGGAT...AAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CCA 90 bp ATCCTTTTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTAAGATCTGCCGCTTTTaGCAAATGTTTCCTTTTGTC +
Preference number: 2 (lower is better)
Translates to: ILLNECHTPMICLQVCERKICRF*QMFPFV
Trigger: GACAAAAGGAAACATTTGCCAAAAGCGGCAGATCTT...ACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAAAAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CCA 90 bp CTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTAAGATCTGCCGCTTTTaGCAAATGTTTCCTTTTGTC +
Preference number: 2 (lower is better)
Translates to: LQLPVVTTCRVCPNLYTFKICRF*QMFPFV
Trigger: GACAAAAGGAAACATTTGCCAAAAGCGGCAGATCTT...AAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CCA 90 bp GGCAGGGCTAATGTTACTGCATTCTTTGTTCTGTATGTCAGGATTAATGACAGGTTGGTTAGCAAAGCATaGAGATCCTCATGGCTTAGG +
Preference number: 2 (lower is better)
Translates to: GRANVTAFFVLYVRINDRLVSKA*RSSWLR
Trigger: CCTAAGCCATGAGGATCTCCATGCTTTGCTAACCAA...CCTGTCATTAATCCTGACATACAGAACAAAGAATGCAGTAACATTAGCCCTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
3UTR-3UTR CCA 90 bp TCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTAACTTATCCAGAAAACAGTTATCTTaGTTAGCAAAGCATGGAGAT +
Preference number: 2 (lower is better)
Translates to: SPAPRLSPCSPPELCNLSRKQLS*LAKHGD
Trigger: ATCTCCATGCTTTGCTAACCAAGATAACTGTTTTCT...GGATAAGTTACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR CCA 90 bp GCACGTCCTACACGTGACCTGGCAGGGCTAATGTTACTGCATTCTTTGTTCTGTTATATTGACTCTTTATaGCACTCACTTTTAAAGGGG +
Preference number: 2 (lower is better)
Translates to: ARPTRDLAGLMLLHSLFCYIDSL*HSLLKG
Trigger: CCCCTTTAAAAGTGAGTGCCATAAAGAGTCAATATA...ACAGAACAAAGAATGCAGTAACATTAGCCCTGCCAGGTCACGTGTAGGACGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
3UTR-3UTR TCA 90 bp GTTAAGAAAAATATAGCCTCGTTAATAAGGTCTTTTGGCTTCTGCCACCCAGCGTCTGATCCTTTTGAATaGGTGCCATACGCCAATGAT +
Preference number: 2 (lower is better)
Translates to: VKKNIASLIRSFGFCHPASDPFE*VPYAND
Trigger: ATCATTGGCGTATGGCACTCATTCAAAAGGATCAGA...CGCTGGGTGGCAGAAGCCAAAAGACCTTATTAACGAGGCTATATTTTTCTTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
3UTR-3UTR TCA 90 bp GGCAGGGCTAATGTTACTGCATTCTTTGTTCTGTATGTCAGGATTAATGACAGGCACAGCTTATCCTTTTaGCAGCTGACCTTGAACTTA +
Preference number: 2 (lower is better)
Translates to: GRANVTAFFVLYVRINDRHSLSF*QLTLNL
Trigger: TAAGTTCAAGGTCAGCTGTCAAAAGGATAAGCTGTG...CCTGTCATTAATCCTGACATACAGAACAAAGAATGCAGTAACATTAGCCCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
3UTR-3UTR TCA 90 bp AGAGTACACTGCTGCATTCAAACCACAACTAGAATCCAACACTTAGCGAACCTCCCTGGTGATAGAACGTaGCTGGTCACAATAAAAATT +
Preference number: 2 (lower is better)
Translates to: RVHCCIQTTTRIQHLANLPGDRT*LVTIKI
Trigger: AATTTTTATTGTGACCAGTCACGTTCTATCACCAGG...GAGGTTCGCTAAGTGTTGGATTCTAGTTGTGGTTTGAATGCAGCAGTGTACTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
3UTR-3UTR GCA 90 bp CCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCTCTGAACATACGCCAATGATATaGCTGCAGGTTTGTGAGCGT +
Preference number: 2 (lower is better)
Translates to: PFLSFLLFSFKVGMVLSEHTPMI*LQVCER
Trigger: ACGCTCACAAACCTGCAGGCATATCATTGGCGTATG...TTCAGAGAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CCA 90 bp AGAGTACACTGCTGCATTCAAACCACAACTAGAATCCAACACTTAGCGAACCTCAAGATCTGCCGCTTTTaGCAAATGTTTCCTTTTGTC +
Preference number: 2 (lower is better)
Translates to: RVHCCIQTTTRIQHLANLKICRF*QMFPFV
Trigger: GACAAAAGGAAACATTTGCCAAAAGCGGCAGATCTT...GAGGTTCGCTAAGTGTTGGATTCTAGTTGTGGTTTGAATGCAGCAGTGTACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
3UTR-3UTR TCA 90 bp CCCTTTCCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCTCTGATCCTTTTGAATaGGTGCCATACGCCAATGAT +
Preference number: 2 (lower is better)
Translates to: PFPFLSFLLFSFKVGMVLSDPFE*VPYAND
Trigger: ATCATTGGCGTATGGCACTCATTCAAAAGGATCAGA...GAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGGAAAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR TCA 90 bp AAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTATACAAAAAGTCCTTTCTGATCCTTTTGAATaGGTGCCATACGCCAATGAT +
Preference number: 2 (lower is better)
Translates to: KAWRSSWLRVVLSIQKVLSDPFE*VPYAND
Trigger: ATCATTGGCGTATGGCACTCATTCAAAAGGATCAGA...AAGGACTTTTTGTATAGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR TCA 90 bp AAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTATACAAAAAGTCCTTAGGTATGGTCCTCTCTaGATGGTTTCTGATCCTTTT +
Preference number: 2 (lower is better)
Translates to: KAWRSSWLRVVLSIQKVLRYGPL*MVSDPF
Trigger: AAAAGGATCAGAAACCATTCAGAGAGGACCATACCT...AAGGACTTTTTGTATAGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR TCA 90 bp GGCAGGGCTAATGTTACTGCATTCTTTGTTCTGTATGTCAGGATTAATGACAGGGGTCAGTTAAAATCATaGAGGTGGATACCAAGTAAC +
Preference number: 2 (lower is better)
Translates to: GRANVTAFFVLYVRINDRGQLKS*RWIPSN
Trigger: GTTACTTGGTATCCACCTTCATGATTTTAACTGACC...CCTGTCATTAATCCTGACATACAGAACAAAGAATGCAGTAACATTAGCCCTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
3UTR-3UTR GCA 90 bp AGAGTACACTGCTGCATTCAAACCACAACTAGAATCCAACACTTAGCGAACCTCCTTTCAGTAAAGATCTaGCGCTTTTGGCAAATGTTT +
Preference number: 2 (lower is better)
Translates to: RVHCCIQTTTRIQHLANLLSVKI*RFWQMF
Trigger: AAACATTTGCCAAAAGCGGCAGATCTTTACTGAAAG...GAGGTTCGCTAAGTGTTGGATTCTAGTTGTGGTTTGAATGCAGCAGTGTACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
3UTR-3UTR GCA 90 bp ACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTCTTTCAGTAAAGATCTaGCGCTTTTGGCAAATGTTT +
Preference number: 2 (lower is better)
Translates to: TITGSHHLPGLSKPLYIFLSVKI*RFWQMF
Trigger: AAACATTTGCCAAAAGCGGCAGATCTTTACTGAAAG...AAAAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CCA 90 bp GTTATCTTGGTTAGCAAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTATGGTCCTCTCTGAATaGTTTCTGATCCTTTTGAAT +
Preference number: 2 (lower is better)
Translates to: VILVSKAWRSSWLRVVLSMVLSE*FLILLN
Trigger: ATTCAAAAGGATCAGAAACCATTCAGAGAGGACCAT...AGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTTGCTAACCAAGATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CCA 90 bp AGCTTGCAGGACTTAGGCTCCAACACAGCTTCTTACTCTGGGCATATTTCTAAAACAAAAAGTCCTTGGTaGGTTTTTACAGGACTGTTT +
Preference number: 2 (lower is better)
Translates to: SLQDLGSNTASYSGHISKTKSPW*VFTGLF
Trigger: AAACAGTCCTGTAAAAACCCACCAAGGACTTTTTGT...TTTAGAAATATGCCCAGAGTAAGAAGCTGTGTTGGAGCCTAAGTCCTGCAAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR TCA 90 bp GTTAAGAAAAATATAGCCTCGTTAATAAGGTCTTTTGGCTTCTGCCACCCAGCGAAAGGGTCACAACAGTaGAAAGAAGTTAGCCTTAAA +
Preference number: 2 (lower is better)
Translates to: VKKNIASLIRSFGFCHPAKGSQQ*KEVSLK
Trigger: TTTAAGGCTAACTTCTTTTCACTGTTGTGACCCTTT...CGCTGGGTGGCAGAAGCCAAAAGACCTTATTAACGAGGCTATATTTTTCTTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
3UTR-3UTR TCA 90 bp GGCAGGGCTAATGTTACTGCATTCTTTGTTCTGTATGTCAGGATTAATGACAGGAAAGGGTCACAACAGTaGAAAGAAGTTAGCCTTAAA +
Preference number: 2 (lower is better)
Translates to: GRANVTAFFVLYVRINDRKGSQQ*KEVSLK
Trigger: TTTAAGGCTAACTTCTTTTCACTGTTGTGACCCTTT...CCTGTCATTAATCCTGACATACAGAACAAAGAATGCAGTAACATTAGCCCTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
3UTR-3UTR TCA 90 bp CCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCTCTGAATCTGATCCTTTTGAATaGGTGCCATACGCCAATGAT +
Preference number: 2 (lower is better)
Translates to: PFLSFLLFSFKVGMVLSESDPFE*VPYAND
Trigger: ATCATTGGCGTATGGCACTCATTCAAAAGGATCAGA...TTCAGAGAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR TCA 90 bp CCTTGGTGGGTTTTTACAGGACTGTTTAAAATATTAGCGAAGCTATTGAGGGAAAGGTATGGTCCTCTCTaGATGGTTTCTGATCCTTTT +
Preference number: 2 (lower is better)
Translates to: PWWVFTGLFKILAKLLRERYGPL*MVSDPF
Trigger: AAAAGGATCAGAAACCATTCAGAGAGGACCATACCT...TTCCCTCAATAGCTTCGCTAATATTTTAAACAGTCCTGTAAAAACCCACCAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR GCA 90 bp GGCAGGGCTAATGTTACTGCATTCTTTGTTCTGTATGTCAGGATTAATGACAGGCTTTCAGTAAAGATCTaGCGCTTTTGGCAAATGTTT +
Preference number: 2 (lower is better)
Translates to: GRANVTAFFVLYVRINDRLSVKI*RFWQMF
Trigger: AAACATTTGCCAAAAGCGGCAGATCTTTACTGAAAG...CCTGTCATTAATCCTGACATACAGAACAAAGAATGCAGTAACATTAGCCCTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
3UTR-3UTR CCA 90 bp GGCAGGGCTAATGTTACTGCATTCTTTGTTCTGTATGTCAGGATTAATGACAGGATGGTCCTCTCTGAATaGTTTCTGATCCTTTTGAAT +
Preference number: 2 (lower is better)
Translates to: GRANVTAFFVLYVRINDRMVLSE*FLILLN
Trigger: ATTCAAAAGGATCAGAAACCATTCAGAGAGGACCAT...CCTGTCATTAATCCTGACATACAGAACAAAGAATGCAGTAACATTAGCCCTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
3UTR-3UTR CCA 90 bp GGCAGGGCTAATGTTACTGCATTCTTTGTTCTGTATGTCAGGATTAATGACAGGTATACAAAAAGTCCTTaGTGGGTTTTTACAGGACTG +
Preference number: 2 (lower is better)
Translates to: GRANVTAFFVLYVRINDRYTKSP*WVFTGL
Trigger: CAGTCCTGTAAAAACCCACCAAGGACTTTTTGTATA...CCTGTCATTAATCCTGACATACAGAACAAAGAATGCAGTAACATTAGCCCTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
3UTR-3UTR TCA 90 bp AAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTATACAAAAAGTCCTTAAAGGGTCACAACAGTaGAAAGAAGTTAGCCTTAAA +
Preference number: 2 (lower is better)
Translates to: KAWRSSWLRVVLSIQKVLKGSQQ*KEVSLK
Trigger: TTTAAGGCTAACTTCTTTTCACTGTTGTGACCCTTT...AAGGACTTTTTGTATAGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR GCA 90 bp AAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTATACAAAAAGTCCTTCTTTCAGTAAAGATCTaGCGCTTTTGGCAAATGTTT +
Preference number: 2 (lower is better)
Translates to: KAWRSSWLRVVLSIQKVLLSVKI*RFWQMF
Trigger: AAACATTTGCCAAAAGCGGCAGATCTTTACTGAAAG...AAGGACTTTTTGTATAGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR GCA 90 bp CCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCTCTGAAATCCTTTTGAATGAGTaGCATACGCCAATGATATGC +
Preference number: 2 (lower is better)
Translates to: PFLSFLLFSFKVGMVLSEILLNE*HTPMIC
Trigger: GCATATCATTGGCGTATGGCACTCATTCAAAAGGAT...TTCAGAGAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CCA 90 bp AAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTATACAAAAAGTCCTTATGGTCCTCTCTGAATaGTTTCTGATCCTTTTGAAT +
Preference number: 2 (lower is better)
Translates to: KAWRSSWLRVVLSIQKVLMVLSE*FLILLN
Trigger: ATTCAAAAGGATCAGAAACCATTCAGAGAGGACCAT...AAGGACTTTTTGTATAGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CCA 90 bp TATATGGATACCACCAAAGGTGCATTGTGGTCTAATTCTGGATTGCAGATCAAGACAAAAAGTCCTTGGTaGGTTTTTACAGGACTGTTT +
Preference number: 2 (lower is better)
Translates to: YMDTTKGALWSNSGLQIKTKSPW*VFTGLF
Trigger: AAACAGTCCTGTAAAAACCCACCAAGGACTTTTTGT...CTTGATCTGCAATCCAGAATTAGACCACAATGCACCTTTGGTGGTATCCATATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
3UTR-3UTR CCA 90 bp TATATGGATACCACCAAAGGTGCATTGTGGTCTAATTCTGGATTGCAGATCAAGTATACAAAAAGTCCTTaGTGGGTTTTTACAGGACTG +
Preference number: 2 (lower is better)
Translates to: YMDTTKGALWSNSGLQIKYTKSP*WVFTGL
Trigger: CAGTCCTGTAAAAACCCACCAAGGACTTTTTGTATA...CTTGATCTGCAATCCAGAATTAGACCACAATGCACCTTTGGTGGTATCCATATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
3UTR-3UTR TCA 90 bp AATTTAGGATGTTGCAATGTAATATGTTCTAACCCCACAGCTTATCCTTTTGACTCTGATCCTTTTGAATaGGTGCCATACGCCAATGAT +
Preference number: 2 (lower is better)
Translates to: NLGCCNVICSNPTAYPFDSDPFE*VPYAND
Trigger: ATCATTGGCGTATGGCACTCATTCAAAAGGATCAGA...GTCAAAAGGATAAGCTGTGGGGTTAGAACATATTACATTGCAACATCCTAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR CCA 90 bp CCTTGGTGGGTTTTTACAGGACTGTTTAAAATATTAGCGAAGCTATTGAGGGAAATGGTCCTCTCTGAATaGTTTCTGATCCTTTTGAAT +
Preference number: 2 (lower is better)
Translates to: PWWVFTGLFKILAKLLREMVLSE*FLILLN
Trigger: ATTCAAAAGGATCAGAAACCATTCAGAGAGGACCAT...TTCCCTCAATAGCTTCGCTAATATTTTAAACAGTCCTGTAAAAACCCACCAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CCA 90 bp CCTTGGTGGGTTTTTACAGGACTGTTTAAAATATTAGCGAAGCTATTGAGGGAAACAAAAAGTCCTTGGTaGGTTTTTACAGGACTGTTT +
Preference number: 2 (lower is better)
Translates to: PWWVFTGLFKILAKLLRETKSPW*VFTGLF
Trigger: AAACAGTCCTGTAAAAACCCACCAAGGACTTTTTGT...TTCCCTCAATAGCTTCGCTAATATTTTAAACAGTCCTGTAAAAACCCACCAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR GCA 90 bp AATTTAGGATGTTGCAATGTAATATGTTCTAACCCCACAGCTTATCCTTTTGACATCCTTTTGAATGAGTaGCATACGCCAATGATATGC +
Preference number: 2 (lower is better)
Translates to: NLGCCNVICSNPTAYPFDILLNE*HTPMIC
Trigger: GCATATCATTGGCGTATGGCACTCATTCAAAAGGAT...GTCAAAAGGATAAGCTGTGGGGTTAGAACATATTACATTGCAACATCCTAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR CAA 90 bp ATTATACCTTATTTCCAGCAGGAGAAACTTTTGAAAATTTCCCACTaGAATTCACTACAGACAGCTGAATTTAAGTCCCTTGAGATACAC +
Preference number: 2 (lower is better)
Translates to: IIPYFQQEKLLKISH*NSLQTAEFKSLEIH
Trigger: GTGTATCTCAAGGGACTTAAATTCAGCTGTCTGTAGTGAATTCAAGTGGGAAATTTTCAAAAGTTTCTCCTGCTGGAAATAAGGTATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
3UTR-3UTR CAA 90 bp CAGAACTCTGTAACTTATCCATCAAGTAAAGCAGGTCGGTCGCCCCCAGGACCCACCGGTAGTCACCACTaGCCGGGTCTGTCCAAACCT +
Preference number: 3 (lower is better)
Translates to: QNSVTYPSSKAGRSPPGPTGSHH*PGLSKP
Trigger: AGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGT...GGGTCCTGGGGGCGACCGACCTGCTTTACTTGATGGATAAGTTACAGAGTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR TCA 72 bp CTGAAGGACTTTCCCTTTCGTCCGGCGAAGGTCTGGTaGGTCCAATGGGGGAGTGGAATTCGTTCCGGTGAT +
Preference number: 3 (lower is better)
Translates to: LKDFPFRPAKVW*VQWGSGIRSGD
Trigger: ATCACCGGAACGAATTCCACTCCCCCATTGGACTCACCAGACCTTCGCCGGACGAAAGGGAAAGTCCTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
3UTR TCA 72 bp TGTTGCCCATCCTTCAGAGAGTCGCATGCGCTTGACTaGAGGACTTTCCCTTTCGTCCGGCGAAGGTCTGGT +
Preference number: 3 (lower is better)
Translates to: CCPSFRESHALD*RTFPFVRRRSG
Trigger: ACCAGACCTTCGCCGGACGAAAGGGAAAGTCCTTCAGTCAAGCGCATGCGACTCTCTGAAGGATGGGCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
3UTR CCA 72 bp CCTCCACATATCAATGCGCACAGTCCACAGGCTGCATaGCTTGCGCCTGCTGCTCACCATGACCAGAATTTC +
Preference number: 3 (lower is better)
Translates to: PPHINAHSPQAA*LAPAAHHDQNF
Trigger: GAAATTCTGGTCATGGTGAGCAGCAGGCGCAAGCCATGCAGCCTGTGGACTGTGCGCATTGATATGTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
3UTR TCA 72 bp ATCATGTTGCCCATCCTTCAGAGAGTCGCATGCGCTTaGCTGAAGGACTTTCCCTTTCGTCCGGCGAAGGTC +
Preference number: 3 (lower is better)
Translates to: IMLPILQRVACA*LKDFPFRPAKV
Trigger: GACCTTCGCCGGACGAAAGGGAAAGTCCTTCAGTCAAGCGCATGCGACTCTCTGAAGGATGGGCAACATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
3UTR-3UTR CAA 90 bp TCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTAACTTATCCACCGGTAGTCACCACTaGCCGGGTCTGTCCAAACCT +
Preference number: 3 (lower is better)
Translates to: SPAPRLSPCSPPELCNLSTGSHH*PGLSKP
Trigger: AGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGT...GGATAAGTTACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR CAA 90 bp CTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTACCGGTAGTCACCACTaGCCGGGTCTGTCCAAACCT +
Preference number: 3 (lower is better)
Translates to: LQVCERAWMLGDRRVPTITGSHH*PGLSKP
Trigger: AGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGT...AATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CAA 90 bp CTTCCTCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTAACTACCCAGGCTTTCACCTaGTTCTCCTCCAGAACTCTG +
Preference number: 3 (lower is better)
Translates to: LPLQHPGFHLVLLQNSVTTQAFT*FSSRTL
Trigger: CAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGT...AGTTACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGAGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR CAA 90 bp ACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGGAGAGTCGCATGCGCTaGACTGAAGGACTTTCCCTT +
Preference number: 3 (lower is better)
Translates to: TPMICLQVCERAWMLGDRESRMR*TEGLSL
Trigger: AAGGGAAAGTCCTTCAGTCAAGCGCATGCGACTCTC...CCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197722.5
3UTR-3UTR CAA 90 bp ATCCCCCAGAGCTCTGCCCTAGACTTCTCAATACAAAGAACTTGGTGTGATCAAACCGGTAGTCACCACTaGCCGGGTCTGTCCAAACCT +
Preference number: 3 (lower is better)
Translates to: IPQSSALDFSIQRTWCDQTGSHH*PGLSKP
Trigger: AGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGT...TTGATCACACCAAGTTCTTTGTATTGAGAAGTCTAGGGCAGAGCTCTGGGGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
3UTR-3UTR CAA 90 bp AGCTTGCAGGACTTAGGCTCCAACACAGCTTCTTACTCTGGGCATATTTCTAAAACCGGTAGTCACCACTaGCCGGGTCTGTCCAAACCT +
Preference number: 3 (lower is better)
Translates to: SLQDLGSNTASYSGHISKTGSHH*PGLSKP
Trigger: AGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGT...TTTAGAAATATGCCCAGAGTAAGAAGCTGTGTTGGAGCCTAAGTCCTGCAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR CAA 90 bp CAGAACTCTGTAACTTATCCATCAAGTAAAGCAGGTCGGTCGCCCCCAGGACCCTGGTTTCTGATCCTTTaGAATGAGTGCCATACGCCA +
Preference number: 3 (lower is better)
Translates to: QNSVTYPSSKAGRSPPGPWFLIL*NECHTP
Trigger: TGGCGTATGGCACTCATTCAAAAGGATCAGAAACCA...GGGTCCTGGGGGCGACCGACCTGCTTTACTTGATGGATAAGTTACAGAGTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR GCA 72 bp ACGGCAAACCATCTGAAGCAATCCAAGCTTCATGCCTaGAGTGACCCTTGCCTGCTTACTTCAAGAGTACAC +
Preference number: 3 (lower is better)
Translates to: TANHLKQSKLHA*SDPCLLTSRVH
Trigger: GTGTACTCTTGAAGTAAGCAGGCAAGGGTCACTGCAGGCATGAAGCTTGGATTGCTTCAGATGGTTTGCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
3UTR CCA 72 bp ACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTaGATGTTAGGTGACAGGCGTGTTCCTACAATTACC +
Preference number: 3 (lower is better)
Translates to: TPMICLQVCERA*MLGDRRVPTIT
Trigger: GGTAATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CAA 90 bp GGCAGGGCTAATGTTACTGCATTCTTTGTTCTGTATGTCAGGATTAATGACAGGACCGGTAGTCACCACTaGCCGGGTCTGTCCAAACCT +
Preference number: 3 (lower is better)
Translates to: GRANVTAFFVLYVRINDRTGSHH*PGLSKP
Trigger: AGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGT...CCTGTCATTAATCCTGACATACAGAACAAAGAATGCAGTAACATTAGCCCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
3UTR-3UTR CAA 90 bp GAAGTGACATTTGGGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCCCACAGCTTATCCTTTaGACAGCTGACCTTGAACTT +
Preference number: 3 (lower is better)
Translates to: EVTFGGPDTPGCSTVLYCPQLIL*TADLEL
Trigger: AAGTTCAAGGTCAGCTGTCAAAAGGATAAGCTGTGG...GCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCCCAAATGTCACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR TCA 72 bp AATATCTCTAGTGGCAGGAAATTAATGCCATACAACTaGCGACACCGTAGCAGATGGCAGAGGCGGGAACAG +
Preference number: 3 (lower is better)
Translates to: NISSGRKLMPYN*RHRSRWQRREQ
Trigger: CTGTTCCCGCCTCTGCCATCTGCTACGGTGTCGTCAGTTGTATGGCATTAATTTCCTGCCACTAGAGATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
3UTR GCA 72 bp AGCAATCCAAGCTTCATGCCTGCAGTGACCCTTGCCTaGTTACTTCAAGAGTACACTGCTGCATTCAAACCA +
Preference number: 3 (lower is better)
Translates to: SNPSFMPAVTLA*LLQEYTAAFKP
Trigger: TGGTTTGAATGCAGCAGTGTACTCTTGAAGTAAGCAGGCAAGGGTCACTGCAGGCATGAAGCTTGGATTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
3UTR GCA 72 bp CTGAAGCAATCCAAGCTTCATGCCTGCAGTGACCCTTaGCTGCTTACTTCAAGAGTACACTGCTGCATTCAA +
Preference number: 3 (lower is better)
Translates to: LKQSKLHACSDP*LLTSRVHCCIQ
Trigger: TTGAATGCAGCAGTGTACTCTTGAAGTAAGCAGGCAAGGGTCACTGCAGGCATGAAGCTTGGATTGCTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
3UTR-3UTR CAA 90 bp TATATGGATACCACCAAAGGTGCATTGTGGTCTAATTCTGGATTGCAGATCAAGACCGGTAGTCACCACTaGCCGGGTCTGTCCAAACCT +
Preference number: 3 (lower is better)
Translates to: YMDTTKGALWSNSGLQIKTGSHH*PGLSKP
Trigger: AGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGT...CTTGATCTGCAATCCAGAATTAGACCACAATGCACCTTTGGTGGTATCCATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
3UTR-3UTR CAA 90 bp CAGAACTCTGTAACTTATCCATCAAGTAAAGCAGGTCGGTCGCCCCCAGGACCCCTATACAAAAAGTCCTaGGTGGGTTTTTACAGGACT +
Preference number: 3 (lower is better)
Translates to: QNSVTYPSSKAGRSPPGPLYKKS*VGFYRT
Trigger: AGTCCTGTAAAAACCCACCAAGGACTTTTTGTATAG...GGGTCCTGGGGGCGACCGACCTGCTTTACTTGATGGATAAGTTACAGAGTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR CAA 90 bp CCTTGGTGGGTTTTTACAGGACTGTTTAAAATATTAGCGAAGCTATTGAGGGAAACCGGTAGTCACCACTaGCCGGGTCTGTCCAAACCT +
Preference number: 3 (lower is better)
Translates to: PWWVFTGLFKILAKLLRETGSHH*PGLSKP
Trigger: AGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGT...TTCCCTCAATAGCTTCGCTAATATTTTAAACAGTCCTGTAAAAACCCACCAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CAA 90 bp CCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTGGTTTCTGATCCTTTaGAATGAGTGCCATACGCCA +
Preference number: 3 (lower is better)
Translates to: PTITGSHHLPGLSKPLYIWFLIL*NECHTP
Trigger: TGGCGTATGGCACTCATTCAAAAGGATCAGAAACCA...AATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR GCA 72 bp CTGATCCTTTTGAATGAGTGCCATACGCCAATGATATaGCTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGT +
Preference number: 3 (lower is better)
Translates to: LILLNECHTPMI*LQVCERAWMLG
Trigger: ACCTAACATCCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAAAAGGATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CAA 90 bp CAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTACCTGTACAAGTGTTCTGTaGTACAACTCAAGTGCTAAG +
Preference number: 3 (lower is better)
Translates to: QVCERAWMLGDRRVPTITCTSVL*YNSSAK
Trigger: CTTAGCACTTGAGTTGTACAACAGAACACTTGTACA...GGTAATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CAA 90 bp GGCTTCTGCCACCCAGCGGCAGCCTTTTACAGTGAGAAACATGTATGTAGCAACATTGTAACATACATTTaGCAAAGGGTCACAACAGTG +
Preference number: 3 (lower is better)
Translates to: GFCHPAAAFYSEKHVCSNIVTYI*QRVTTV
Trigger: CACTGTTGTGACCCTTTGCAAAATGTATGTTACAAT...GTTGCTACATACATGTTTCTCACTGTAAAAGGCTGCCGCTGGGTGGCAGAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
3UTR-3UTR CAA 90 bp CTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTAAAGATCTGCCGCTTTaGGCAAATGTTTCCTTTTGT +
Preference number: 3 (lower is better)
Translates to: LQVCERAWMLGDRRVPTIKDLPL*ANVSFC
Trigger: ACAAAAGGAAACATTTGCCAAAAGCGGCAGATCTTT...AATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CAA 90 bp TTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGAAAGATCTGCCGCTTTaGGCAAATGTTTCCTTTTGT +
Preference number: 3 (lower is better)
Translates to: LNECHTPMICLQVCERAWKDLPL*ANVSFC
Trigger: ACAAAAGGAAACATTTGCCAAAAGCGGCAGATCTTT...CCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CAA 90 bp ATCCCCCAGAGCTCTGCCCTAGACTTCTCAATACAAAGAACTTGGTGTGATCAATGGTTTCTGATCCTTTaGAATGAGTGCCATACGCCA +
Preference number: 3 (lower is better)
Translates to: IPQSSALDFSIQRTWCDQWFLIL*NECHTP
Trigger: TGGCGTATGGCACTCATTCAAAAGGATCAGAAACCA...TTGATCACACCAAGTTCTTTGTATTGAGAAGTCTAGGGCAGAGCTCTGGGGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
3UTR-3UTR CAA 90 bp ATCCTTTTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTTGGTTTCTGATCCTTTaGAATGAGTGCCATACGCCA +
Preference number: 3 (lower is better)
Translates to: ILLNECHTPMICLQVCERWFLIL*NECHTP
Trigger: TGGCGTATGGCACTCATTCAAAAGGATCAGAAACCA...ACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAAAAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CAA 90 bp GCACGTCCTACACGTGACCTGGCAGGGCTAATGTTACTGCATTCTTTGTTCTGTGAGAAAACAGTTATCTaGGTTAGCAAAGCATGGAGA +
Preference number: 3 (lower is better)
Translates to: ARPTRDLAGLMLLHSLFCEKTVI*VSKAWR
Trigger: TCTCCATGCTTTGCTAACCAAGATAACTGTTTTCTC...ACAGAACAAAGAATGCAGTAACATTAGCCCTGCCAGGTCACGTGTAGGACGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
3UTR-3UTR CAA 90 bp GGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCTGACAACATTGTTGAGAAAACAGTTATCTaGGTTAGCAAAGCATGGAGA +
Preference number: 3 (lower is better)
Translates to: GVLTHQAVQQSYTADNIVEKTVI*VSKAWR
Trigger: TCTCCATGCTTTGCTAACCAAGATAACTGTTTTCTC...AACAATGTTGTCAGCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR CAA 90 bp ATCCCCCAGAGCTCTGCCCTAGACTTCTCAATACAAAGAACTTGGTGTGATCAACCACAGCTTATCCTTTaGACAGCTGACCTTGAACTT +
Preference number: 3 (lower is better)
Translates to: IPQSSALDFSIQRTWCDQPQLIL*TADLEL
Trigger: AAGTTCAAGGTCAGCTGTCAAAAGGATAAGCTGTGG...TTGATCACACCAAGTTCTTTGTATTGAGAAGTCTAGGGCAGAGCTCTGGGGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
3UTR GCA 72 bp GTCCTCTCTGAATGGTTTCTGATCCTTTTGAATGAGTaGCATACGCCAATGATATGCCTGCAGGTTTGTGAG +
Preference number: 3 (lower is better)
Translates to: VLSEWFLILLNE*HTPMICLQVCE
Trigger: CTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAAAAGGATCAGAAACCATTCAGAGAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR GCA 72 bp AGTGACCCTTGCCTGCTTACTTCAAGAGTACACTGCTaGATTCAAACCACAACTAGAATCCAACACTTAGCG +
Preference number: 3 (lower is better)
Translates to: SDPCLLTSRVHC*IQTTTRIQHLA
Trigger: CGCTAAGTGTTGGATTCTAGTTGTGGTTTGAATGCAGCAGTGTACTCTTGAAGTAAGCAGGCAAGGGTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
3UTR GCA 72 bp CCATCTTGTCATCTAGTGGCGACAAAGTCCAGCTTATaGCGCTGTGAGCCTCTATTTGAATACTTGTTGCAA +
Preference number: 3 (lower is better)
Translates to: PSCHLVATKSSL*RCEPLFEYLLQ
Trigger: TTGCAACAAGTATTCAAATAGAGGCTCACAGCGGCATAAGCTGGACTTTGTCGCCACTAGATGACAAGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
3UTR-3UTR CAA 90 bp CAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTACCATTGTAACATACATTTaGCAAAGGGTCACAACAGTG +
Preference number: 3 (lower is better)
Translates to: QVCERAWMLGDRRVPTITIVTYI*QRVTTV
Trigger: CACTGTTGTGACCCTTTGCAAAATGTATGTTACAAT...GGTAATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CAA 90 bp TTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGATTGTAACATACATTTaGCAAAGGGTCACAACAGTG +
Preference number: 3 (lower is better)
Translates to: LNECHTPMICLQVCERAWIVTYI*QRVTTV
Trigger: CACTGTTGTGACCCTTTGCAAAATGTATGTTACAAT...CCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CAA 90 bp CAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTACCACATTTTTCTATATGTaGCATAACAGCTGCTCTCTC +
Preference number: 3 (lower is better)
Translates to: QVCERAWMLGDRRVPTITTFFYM*HNSCSL
Trigger: GAGAGAGCAGCTGTTATGCAACATATAGAAAAATGT...GGTAATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CAA 90 bp CTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTACATTTTTCTATATGTaGCATAACAGCTGCTCTCTC +
Preference number: 3 (lower is better)
Translates to: LQVCERAWMLGDRRVPTITFFYM*HNSCSL
Trigger: GAGAGAGCAGCTGTTATGCAACATATAGAAAAATGT...AATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CAA 90 bp TTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGACATTTTTCTATATGTaGCATAACAGCTGCTCTCTC +
Preference number: 3 (lower is better)
Translates to: LNECHTPMICLQVCERAWTFFYM*HNSCSL
Trigger: GAGAGAGCAGCTGTTATGCAACATATAGAAAAATGT...CCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CAA 90 bp AGCTTGCAGGACTTAGGCTCCAACACAGCTTCTTACTCTGGGCATATTTCTAAACCACAGCTTATCCTTTaGACAGCTGACCTTGAACTT +
Preference number: 3 (lower is better)
Translates to: SLQDLGSNTASYSGHISKPQLIL*TADLEL
Trigger: AAGTTCAAGGTCAGCTGTCAAAAGGATAAGCTGTGG...TTTAGAAATATGCCCAGAGTAAGAAGCTGTGTTGGAGCCTAAGTCCTGCAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR CAA 90 bp AGAGTACACTGCTGCATTCAAACCACAACTAGAATCCAACACTTAGCGAACCTCGGATGGTTTCCTGTTTaGCTTCTGCCTAAATACTCG +
Preference number: 3 (lower is better)
Translates to: RVHCCIQTTTRIQHLANLGWFPV*LLPKYS
Trigger: CGAGTATTTAGGCAGAAGCAAAACAGGAAACCATCC...GAGGTTCGCTAAGTGTTGGATTCTAGTTGTGGTTTGAATGCAGCAGTGTACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
3UTR TCA 72 bp AAAGGAAAAGGAAGAAAAACGATACGGCAAACCATCTaGAGCAATCCAAGCTTCATGCCTGCAGTGACCCTT +
Preference number: 3 (lower is better)
Translates to: KGKGRKTIRQTI*SNPSFMPAVTL
Trigger: AAGGGTCACTGCAGGCATGAAGCTTGGATTGCTTCAGATGGTTTGCCGTATCGTTTTTCTTCCTTTTCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
3UTR GCA 72 bp TGCAGTGACCCTTGCCTGCTTACTTCAAGAGTACACTaGTGCATTCAAACCACAACTAGAATCCAACACTTA +
Preference number: 3 (lower is better)
Translates to: CSDPCLLTSRVH*CIQTTTRIQHL
Trigger: TAAGTGTTGGATTCTAGTTGTGGTTTGAATGCAGCAGTGTACTCTTGAAGTAAGCAGGCAAGGGTCACTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
3UTR-3UTR CAA 90 bp TTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACAATTGTAACATACATTTaGCAAAGGGTCACAACAGTG +
Preference number: 3 (lower is better)
Translates to: FLQLPVVTTCRVCPNLYTIVTYI*QRVTTV
Trigger: CACTGTTGTGACCCTTTGCAAAATGTATGTTACAAT...TGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CAA 90 bp CCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTCTATATGAAAGATCTGCCGCTTTaGGCAAATGTTTCCTTTTGT +
Preference number: 3 (lower is better)
Translates to: PVVTTCRVCPNLYTFFYMKDLPL*ANVSFC
Trigger: ACAAAAGGAAACATTTGCCAAAAGCGGCAGATCTTT...CATATAGAAAAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CAA 90 bp ATCCTTTTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTAAAGATCTGCCGCTTTaGGCAAATGTTTCCTTTTGT +
Preference number: 3 (lower is better)
Translates to: ILLNECHTPMICLQVCERKDLPL*ANVSFC
Trigger: ACAAAAGGAAACATTTGCCAAAAGCGGCAGATCTTT...ACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAAAAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR TCA 72 bp CCTGACACACCAGGCTGTTCAACAGTCCTATACTGCTaGCAACATTGTTATGGGTCAGTTAAAATCATGAAG +
Preference number: 3 (lower is better)
Translates to: PDTPGCSTVLYC*QHCYGSVKIMK
Trigger: CTTCATGATTTTAACTGACCCATAACAATGTTGTCAGCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR CAA 90 bp GTTATCTTGGTTAGCAAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTTGTACAAGTGTTCTGTaGTACAACTCAAGTGCTAAG +
Preference number: 3 (lower is better)
Translates to: VILVSKAWRSSWLRVVLSCTSVL*YNSSAK
Trigger: CTTAGCACTTGAGTTGTACAACAGAACACTTGTACA...AGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTTGCTAACCAAGATAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CAA 90 bp ATCCTTTTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTATTGTAACATACATTTaGCAAAGGGTCACAACAGTG +
Preference number: 3 (lower is better)
Translates to: ILLNECHTPMICLQVCERIVTYI*QRVTTV
Trigger: CACTGTTGTGACCCTTTGCAAAATGTATGTTACAAT...ACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAAAAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CAA 90 bp ACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTAAAGATCTGCCGCTTTaGGCAAATGTTTCCTTTTGT +
Preference number: 3 (lower is better)
Translates to: TITGSHHLPGLSKPLYIFKDLPL*ANVSFC
Trigger: ACAAAAGGAAACATTTGCCAAAAGCGGCAGATCTTT...AAAAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CAA 90 bp ATCCTTTTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTACATTTTTCTATATGTaGCATAACAGCTGCTCTCTC +
Preference number: 3 (lower is better)
Translates to: ILLNECHTPMICLQVCERTFFYM*HNSCSL
Trigger: GAGAGAGCAGCTGTTATGCAACATATAGAAAAATGT...ACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAAAAGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CAA 90 bp AAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTATACAAAAAGTCCTTTGGTTTCTGATCCTTTaGAATGAGTGCCATACGCCA +
Preference number: 3 (lower is better)
Translates to: KAWRSSWLRVVLSIQKVLWFLIL*NECHTP
Trigger: TGGCGTATGGCACTCATTCAAAAGGATCAGAAACCA...AAGGACTTTTTGTATAGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CAA 90 bp AGCTTGCAGGACTTAGGCTCCAACACAGCTTCTTACTCTGGGCATATTTCTAAACTATACAAAAAGTCCTaGGTGGGTTTTTACAGGACT +
Preference number: 3 (lower is better)
Translates to: SLQDLGSNTASYSGHISKLYKKS*VGFYRT
Trigger: AGTCCTGTAAAAACCCACCAAGGACTTTTTGTATAG...TTTAGAAATATGCCCAGAGTAAGAAGCTGTGTTGGAGCCTAAGTCCTGCAAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR-3UTR CAA 90 bp ATAAGAACGCGGAGATCTGGCTTACGATTATTCATTCCTAGATTCATAGGGGGAGGGGTGTCTTCATTATaGACACAATCGTTCGTTCTT +
Preference number: 3 (lower is better)
Translates to: IRTRRSGLRLFIPRFIGGGVSSL*TQSFVL
Trigger: AAGAACGAACGATTGTGTCAATAATGAAGACACCCC...TCCCCCTATGAATCTAGGAATGAATAATCGTAAGCCAGATCTCCGCGTTCTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000198360.2
3UTR-3UTR CAA 90 bp GTTAAGAAAAATATAGCCTCGTTAATAAGGTCTTTTGGCTTCTGCCACCCAGCGTGTACAAGTGTTCTGTaGTACAACTCAAGTGCTAAG +
Preference number: 3 (lower is better)
Translates to: VKKNIASLIRSFGFCHPACTSVL*YNSSAK
Trigger: CTTAGCACTTGAGTTGTACAACAGAACACTTGTACA...CGCTGGGTGGCAGAAGCCAAAAGACCTTATTAACGAGGCTATATTTTTCTTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
3UTR-3UTR CAA 90 bp AGAGTACACTGCTGCATTCAAACCACAACTAGAATCCAACACTTAGCGAACCTCATTGTAACATACATTTaGCAAAGGGTCACAACAGTG +
Preference number: 3 (lower is better)
Translates to: RVHCCIQTTTRIQHLANLIVTYI*QRVTTV
Trigger: CACTGTTGTGACCCTTTGCAAAATGTATGTTACAAT...GAGGTTCGCTAAGTGTTGGATTCTAGTTGTGGTTTGAATGCAGCAGTGTACTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
3UTR-3UTR CAA 90 bp GTTATCTTGGTTAGCAAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTACATTTTTCTATATGTaGCATAACAGCTGCTCTCTC +
Preference number: 3 (lower is better)
Translates to: VILVSKAWRSSWLRVVLSTFFYM*HNSCSL
Trigger: GAGAGAGCAGCTGTTATGCAACATATAGAAAAATGT...AGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTTGCTAACCAAGATAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CAA 90 bp CCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCTCTGAATGGTTTCTGATCCTTTaGAATGAGTGCCATACGCCA +
Preference number: 3 (lower is better)
Translates to: PFLSFLLFSFKVGMVLSEWFLIL*NECHTP
Trigger: TGGCGTATGGCACTCATTCAAAAGGATCAGAAACCA...TTCAGAGAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CAA 90 bp AGAGTACACTGCTGCATTCAAACCACAACTAGAATCCAACACTTAGCGAACCTCCTTCAACACTATATATaGACTCTTTATGGCACTCAC +
Preference number: 3 (lower is better)
Translates to: RVHCCIQTTTRIQHLANLLQHYI*TLYGTH
Trigger: GTGAGTGCCATAAAGAGTCAATATATAGTGTTGAAG...GAGGTTCGCTAAGTGTTGGATTCTAGTTGTGGTTTGAATGCAGCAGTGTACTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
3UTR-3UTR CAA 90 bp AAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTATACAAAAAGTCCTTTGTACAAGTGTTCTGTaGTACAACTCAAGTGCTAAG +
Preference number: 3 (lower is better)
Translates to: KAWRSSWLRVVLSIQKVLCTSVL*YNSSAK
Trigger: CTTAGCACTTGAGTTGTACAACAGAACACTTGTACA...AAGGACTTTTTGTATAGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CAA 90 bp TATATGGATACCACCAAAGGTGCATTGTGGTCTAATTCTGGATTGCAGATCAAGAAAGATCTGCCGCTTTaGGCAAATGTTTCCTTTTGT +
Preference number: 3 (lower is better)
Translates to: YMDTTKGALWSNSGLQIKKDLPL*ANVSFC
Trigger: ACAAAAGGAAACATTTGCCAAAAGCGGCAGATCTTT...CTTGATCTGCAATCCAGAATTAGACCACAATGCACCTTTGGTGGTATCCATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
3UTR-3UTR CAA 90 bp TATATGGATACCACCAAAGGTGCATTGTGGTCTAATTCTGGATTGCAGATCAAGCTATACAAAAAGTCCTaGGTGGGTTTTTACAGGACT +
Preference number: 3 (lower is better)
Translates to: YMDTTKGALWSNSGLQIKLYKKS*VGFYRT
Trigger: AGTCCTGTAAAAACCCACCAAGGACTTTTTGTATAG...CTTGATCTGCAATCCAGAATTAGACCACAATGCACCTTTGGTGGTATCCATATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
3UTR CCA 72 bp ACAGTTATCTTGGTTAGCAAAGCATGGAGATCCTCATaGCTTAGGGTAGTGCTTTCTATACAAAAAGTCCTT +
Preference number: 3 (lower is better)
Translates to: TVILVSKAWRSS*LRVVLSIQKVL
Trigger: AAGGACTTTTTGTATAGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTTGCTAACCAAGATAACTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CAA 90 bp CCTTGGTGGGTTTTTACAGGACTGTTTAAAATATTAGCGAAGCTATTGAGGGAATGTACAAGTGTTCTGTaGTACAACTCAAGTGCTAAG +
Preference number: 3 (lower is better)
Translates to: PWWVFTGLFKILAKLLRECTSVL*YNSSAK
Trigger: CTTAGCACTTGAGTTGTACAACAGAACACTTGTACA...TTCCCTCAATAGCTTCGCTAATATTTTAAACAGTCCTGTAAAAACCCACCAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CAA 90 bp AAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTATACAAAAAGTCCTTATTGTAACATACATTTaGCAAAGGGTCACAACAGTG +
Preference number: 3 (lower is better)
Translates to: KAWRSSWLRVVLSIQKVLIVTYI*QRVTTV
Trigger: CACTGTTGTGACCCTTTGCAAAATGTATGTTACAAT...AAGGACTTTTTGTATAGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CAA 90 bp CCCTTTCCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCATTGTAACATACATTTaGCAAAGGGTCACAACAGTG +
Preference number: 3 (lower is better)
Translates to: PFPFLSFLLFSFKVGMVLIVTYI*QRVTTV
Trigger: CACTGTTGTGACCCTTTGCAAAATGTATGTTACAAT...GAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGGAAAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CAA 90 bp CCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCTCTGAAAAAGATCTGCCGCTTTaGGCAAATGTTTCCTTTTGT +
Preference number: 3 (lower is better)
Translates to: PFLSFLLFSFKVGMVLSEKDLPL*ANVSFC
Trigger: ACAAAAGGAAACATTTGCCAAAAGCGGCAGATCTTT...TTCAGAGAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CAA 90 bp TATATGGATACCACCAAAGGTGCATTGTGGTCTAATTCTGGATTGCAGATCAAGACATTTTTCTATATGTaGCATAACAGCTGCTCTCTC +
Preference number: 3 (lower is better)
Translates to: YMDTTKGALWSNSGLQIKTFFYM*HNSCSL
Trigger: GAGAGAGCAGCTGTTATGCAACATATAGAAAAATGT...CTTGATCTGCAATCCAGAATTAGACCACAATGCACCTTTGGTGGTATCCATATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
3UTR-3UTR CAA 90 bp TATATGGATACCACCAAAGGTGCATTGTGGTCTAATTCTGGATTGCAGATCAAGAAAGCCACAAATGCTTaGCAAACTCTTTCTTACCTT +
Preference number: 3 (lower is better)
Translates to: YMDTTKGALWSNSGLQIKKATNA*QTLSYL
Trigger: AAGGTAAGAAAGAGTTTGCAAAGCATTTGTGGCTTT...CTTGATCTGCAATCCAGAATTAGACCACAATGCACCTTTGGTGGTATCCATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
3UTR-3UTR CAA 90 bp AAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTATACAAAAAGTCCTTAAAGCCACAAATGCTTaGCAAACTCTTTCTTACCTT +
Preference number: 3 (lower is better)
Translates to: KAWRSSWLRVVLSIQKVLKATNA*QTLSYL
Trigger: AAGGTAAGAAAGAGTTTGCAAAGCATTTGTGGCTTT...AAGGACTTTTTGTATAGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CAA 90 bp CCTTGGTGGGTTTTTACAGGACTGTTTAAAATATTAGCGAAGCTATTGAGGGAACTATACAAAAAGTCCTaGGTGGGTTTTTACAGGACT +
Preference number: 3 (lower is better)
Translates to: PWWVFTGLFKILAKLLRELYKKS*VGFYRT
Trigger: AGTCCTGTAAAAACCCACCAAGGACTTTTTGTATAG...TTCCCTCAATAGCTTCGCTAATATTTTAAACAGTCCTGTAAAAACCCACCAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CAA 90 bp TATATGGATACCACCAAAGGTGCATTGTGGTCTAATTCTGGATTGCAGATCAAGCTTCAACACTATATATaGACTCTTTATGGCACTCAC +
Preference number: 3 (lower is better)
Translates to: YMDTTKGALWSNSGLQIKLQHYI*TLYGTH
Trigger: GTGAGTGCCATAAAGAGTCAATATATAGTGTTGAAG...CTTGATCTGCAATCCAGAATTAGACCACAATGCACCTTTGGTGGTATCCATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
3UTR TCA 72 bp CATTCTTTGTTCTGTATGTCAGGATTAATGACAGGATaGATCGACAGATCTTCACATTCCAAGAGAAGGGAA +
Preference number: 3 (lower is better)
Translates to: HSLFCMSGLMTG*IDRSSHSKRRE
Trigger: TTCCCTTCTCTTGGAATGTGAAGATCTGTCGATTCATCCTGTCATTAATCCTGACATACAGAACAAAGAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
3UTR GCA 72 bp AAGCATGTTTGTAAGGATGGTTTCCTGTTTTGCTTCTaGCTAAATACTCGTCTTCATGTTCCATTGATACCT +
Preference number: 3 (lower is better)
Translates to: KHVCKDGFLFCF*LNTRLHVPLIP
Trigger: AGGTATCAATGGAACATGAAGACGAGTATTTAGGCAGAAGCAAAACAGGAAACCATCCTTACAAACATGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
3UTR CCA 72 bp TACAAAGAGAAAACAGTTATCTTGGTTAGCAAAGCATaGAGATCCTCATGGCTTAGGGTAGTGCTTTCTATA +
Preference number: 3 (lower is better)
Translates to: YKEKTVILVSKA*RSSWLRVVLSI
Trigger: TATAGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTTGCTAACCAAGATAACTGTTTTCTCTTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR CCA 72 bp CTAGCATCCTATATGGATACCACCAAAGGTGCATTGTaGTCTAATTCTGGATTGCAGATCAAGTTAAGAAAA +
Preference number: 3 (lower is better)
Translates to: LASYMDTTKGAL*SNSGLQIKLRK
Trigger: TTTTCTTAACTTGATCTGCAATCCAGAATTAGACCACAATGCACCTTTGGTGGTATCCATATAGGATGCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
3UTR-3UTR CAA 90 bp CCTTGGTGGGTTTTTACAGGACTGTTTAAAATATTAGCGAAGCTATTGAGGGAAAAAGCCACAAATGCTTaGCAAACTCTTTCTTACCTT +
Preference number: 3 (lower is better)
Translates to: PWWVFTGLFKILAKLLREKATNA*QTLSYL
Trigger: AAGGTAAGAAAGAGTTTGCAAAGCATTTGTGGCTTT...TTCCCTCAATAGCTTCGCTAATATTTTAAACAGTCCTGTAAAAACCCACCAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR-3UTR CAA 90 bp AATTTAGGATGTTGCAATGTAATATGTTCTAACCCCACAGCTTATCCTTTTGACAAAGATCTGCCGCTTTaGGCAAATGTTTCCTTTTGT +
Preference number: 3 (lower is better)
Translates to: NLGCCNVICSNPTAYPFDKDLPL*ANVSFC
Trigger: ACAAAAGGAAACATTTGCCAAAAGCGGCAGATCTTT...GTCAAAAGGATAAGCTGTGGGGTTAGAACATATTACATTGCAACATCCTAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR CCA 72 bp AATTATAAACATGAATTCTCAGGATGGAATCAAGTCTaGCGTGAAATAATGGCTGACTTTCTTGTTCACTTT +
Preference number: 3 (lower is better)
Translates to: NYKHEFSGWNQV*REIMADFLVHF
Trigger: AAAGTGAACAAGAAAGTCAGCCATTATTTCACGCCAGACTTGATTCCATCCTGAGAATTCATGTTTATAATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
CDS-3UTR CCA 90 bp CCGGTGATCCTCTCGGTCGCTCCCATCGTAGGAACTGCTACAGCTGCTCAAGCTGACCTCCCCGCCTCGTaGCGCGTGGTGTGTTGTGGG +
Preference number: 4 (lower is better)
Translates to: PVILSVAPIVGTATAAQADLPAS*RVVCCG
Trigger: CCCACAACACACCACGCGCCACGAGGCGGGGAGGTC...AGCTTGAGCAGCTGTAGCAGTTCCTACGATGGGAGCGACCGAGAGGATCACCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000197145.2
ENSMUST00000200138.5
CDS-3UTR TCA 90 bp CGAAGGTCTGGTGAGTCCAATGGGGGAGTGGAATTCGTTCCGGTGATCCTCTCGGACCAGCAGGCCTGGTaGGTTCCGGGGGTTGCCGTA +
Preference number: 4 (lower is better)
Translates to: RRSGESNGGVEFVPVILSDQQAW*VPGVAV
Trigger: TACGGCAACCCCCGGAACTCACCAGGCCTGCTGGTC...CGAGAGGATCACCGGAACGAATTCCACTCCCCCATTGGACTCACCAGACCTTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR TCA 90 bp CGGCGAAGGTCTGGTGAGTCCAATGGGGGAGTGGAATTCGTTCCGGTGATCCTCTGGTACGGTCCCAACTaGCTGAGGGCAGATGGCGGC +
Preference number: 4 (lower is better)
Translates to: RRRSGESNGGVEFVPVILWYGPN*LRADGG
Trigger: GCCGCCATCTGCCCTCAGTCAGTTGGGACCGTACCA...GAGGATCACCGGAACGAATTCCACTCCCCCATTGGACTCACCAGACCTTCGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000197145.2
ENSMUST00000200138.5
CDS-3UTR TCA 90 bp CTTTCGTCCGGCGAAGGTCTGGTGAGTCCAATGGGGGAGTGGAATTCGTTCCGGTGGTACGGTCCCAACTaGCTGAGGGCAGATGGCGGC +
Preference number: 4 (lower is better)
Translates to: LSSGEGLVSPMGEWNSFRWYGPN*LRADGG
Trigger: GCCGCCATCTGCCCTCAGTCAGTTGGGACCGTACCA...CCGGAACGAATTCCACTCCCCCATTGGACTCACCAGACCTTCGCCGGACGAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000197145.2
ENSMUST00000200138.5
CDS-3UTR CCA 90 bp CGGCGAAGGTCTGGTGAGTCCAATGGGGGAGTGGAATTCGTTCCGGTGATCCTCCCGCCTCGTGGCGCGTaGTGTGTTGTGGGTATCTCG +
Preference number: 4 (lower is better)
Translates to: RRRSGESNGGVEFVPVILPPRGA*CVVGIS
Trigger: CGAGATACCCACAACACACCACGCGCCACGAGGCGG...GAGGATCACCGGAACGAATTCCACTCCCCCATTGGACTCACCAGACCTTCGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR CCA 90 bp AGTGGAATTCGTTCCGGTGATCCTCTCGGTCGCTCCCATCGTAGGAACTGCTACGACCTCCCCGCCTCGTaGCGCGTGGTGTGTTGTGGG +
Preference number: 4 (lower is better)
Translates to: SGIRSGDPLGRSHRRNCYDLPAS*RVVCCG
Trigger: CCCACAACACACCACGCGCCACGAGGCGGGGAGGTC...GTAGCAGTTCCTACGATGGGAGCGACCGAGAGGATCACCGGAACGAATTCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR TCA 90 bp AGTGGAATTCGTTCCGGTGATCCTCTCGGTCGCTCCCATCGTAGGAACTGCTACGACCAGCAGGCCTGGTaGGTTCCGGGGGTTGCCGTA +
Preference number: 4 (lower is better)
Translates to: SGIRSGDPLGRSHRRNCYDQQAW*VPGVAV
Trigger: TACGGCAACCCCCGGAACTCACCAGGCCTGCTGGTC...GTAGCAGTTCCTACGATGGGAGCGACCGAGAGGATCACCGGAACGAATTCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR TCA 90 bp CCGGTGATCCTCTCGGTCGCTCCCATCGTAGGAACTGCTACAGCTGCTCAAGCTCACCGGGGTAGCCAATaGCTGAGCCGACTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: PVILSVAPIVGTATAAQAHRGSQ*LSRLGV
Trigger: AACTCCCAGTCGGCTCAGTCATTGGCTACCCCGGTG...AGCTTGAGCAGCTGTAGCAGTTCCTACGATGGGAGCGACCGAGAGGATCACCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000197145.2
ENSMUST00000200138.5
CDS-3UTR TCA 90 bp CGGCGAAGGTCTGGTGAGTCCAATGGGGGAGTGGAATTCGTTCCGGTGATCCTCCACCGGGGTAGCCAATaGCTGAGCCGACTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: RRRSGESNGGVEFVPVILHRGSQ*LSRLGV
Trigger: AACTCCCAGTCGGCTCAGTCATTGGCTACCCCGGTG...GAGGATCACCGGAACGAATTCCACTCCCCCATTGGACTCACCAGACCTTCGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR TCA 90 bp CCTTTCGTCCGGCGAAGGTCTGGTGAGTCCAATGGGGGAGTGGAATTCGTTCCGCACCGGGGTAGCCAATaGCTGAGCCGACTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: PFVRRRSGESNGGVEFVPHRGSQ*LSRLGV
Trigger: AACTCCCAGTCGGCTCAGTCATTGGCTACCCCGGTG...CGGAACGAATTCCACTCCCCCATTGGACTCACCAGACCTTCGCCGGACGAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR CCA 90 bp TCTGGTGAGTCCAATGGGGGAGTGGAATTCGTTCCGGTGATCCTCTCGGTCGCTCCGCCTCGTGGCGCGTaGTGTGTTGTGGGTATCTCG +
Preference number: 4 (lower is better)
Translates to: SGESNGGVEFVPVILSVAPPRGA*CVVGIS
Trigger: CGAGATACCCACAACACACCACGCGCCACGAGGCGG...AGCGACCGAGAGGATCACCGGAACGAATTCCACTCCCCCATTGGACTCACCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR CCA 90 bp CAGAACTCTGTAACTTATCCATCAAGTAAAGCAGGTCGGTCGCCCCCAGGACCCGACCTCCCCGCCTCGTaGCGCGTGGTGTGTTGTGGG +
Preference number: 4 (lower is better)
Translates to: QNSVTYPSSKAGRSPPGPDLPAS*RVVCCG
Trigger: CCCACAACACACCACGCGCCACGAGGCGGGGAGGTC...GGGTCCTGGGGGCGACCGACCTGCTTTACTTGATGGATAAGTTACAGAGTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CCA 90 bp ACAGGCGTGTTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACGACCTCCCCGCCTCGTaGCGCGTGGTGTGTTGTGGG +
Preference number: 4 (lower is better)
Translates to: TGVFLQLPVVTTCRVCPNDLPAS*RVVCCG
Trigger: CCCACAACACACCACGCGCCACGAGGCGGGGAGGTC...GTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAACACGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp GTTCCGGTGATCCTCTCGGTCGCTCCCATCGTAGGAACTGCTACAGCTGCTCAAACGGTCCCAACTGACTaGGGGCAGATGGCGGCATGT +
Preference number: 4 (lower is better)
Translates to: VPVILSVAPIVGTATAAQTVPTD*GQMAAC
Trigger: ACATGCCGCCATCTGCCCTCAGTCAGTTGGGACCGT...TTGAGCAGCTGTAGCAGTTCCTACGATGGGAGCGACCGAGAGGATCACCGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000197145.2
ENSMUST00000200138.5
CDS-3UTR GCA 90 bp CCGGTGATCCTCTCGGTCGCTCCCATCGTAGGAACTGCTACAGCTGCTCAAGCTTGTAGGTGCTGCTGCTaGCAGCCAGTTACAGAGCCG +
Preference number: 4 (lower is better)
Translates to: PVILSVAPIVGTATAAQACRCCC*QPVTEP
Trigger: CGGCTCTGTAACTGGCTGGCAGCAGCAGCACCTACA...AGCTTGAGCAGCTGTAGCAGTTCCTACGATGGGAGCGACCGAGAGGATCACCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000197145.2
ENSMUST00000200138.5
CDS-3UTR CCA 90 bp TTTCCTTCCTCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTGACCTCCCCGCCTCGTaGCGCGTGGTGTGTTGTGGG +
Preference number: 4 (lower is better)
Translates to: FPSSPAPRLSPCSPPELCDLPAS*RVVCCG
Trigger: CCCACAACACACCACGCGCCACGAGGCGGGGAGGTC...ACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGAGGAAGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR TCA 90 bp ACAGGCGTGTTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACGTGCAAGCTCCCAACTaGCTGAGGGCAGATGGCGGC +
Preference number: 4 (lower is better)
Translates to: TGVFLQLPVVTTCRVCPNVQAPN*LRADGG
Trigger: GCCGCCATCTGCCCTCAGTCAGTTGGGAGCTTGCAC...GTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAACACGCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp CAGAACTCTGTAACTTATCCATCAAGTAAAGCAGGTCGGTCGCCCCCAGGACCCGTGCAAGCTCCCAACTaGCTGAGGGCAGATGGCGGC +
Preference number: 4 (lower is better)
Translates to: QNSVTYPSSKAGRSPPGPVQAPN*LRADGG
Trigger: GCCGCCATCTGCCCTCAGTCAGTTGGGAGCTTGCAC...GGGTCCTGGGGGCGACCGACCTGCTTTACTTGATGGATAAGTTACAGAGTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR TCA 90 bp CAGAACTCTGTAACTTATCCATCAAGTAAAGCAGGTCGGTCGCCCCCAGGACCCGTACGGTCTCCCAACTaGCTGAGGGCAGATGGCGGC +
Preference number: 4 (lower is better)
Translates to: QNSVTYPSSKAGRSPPGPVRSPN*LRADGG
Trigger: GCCGCCATCTGCCCTCAGTCAGTTGGGAGACCGTAC...GGGTCCTGGGGGCGACCGACCTGCTTTACTTGATGGATAAGTTACAGAGTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000197146.5
ENSMUST00000199432.5
CDS-3UTR TCA 90 bp TCAGAGAGTCGCATGCGCTTGACTGAAGGACTTTCCCTTTCGTCCGGCGAAGGTACGGTCCCAACTGACTaGGGGCAGATGGCGGCATGT +
Preference number: 4 (lower is better)
Translates to: SESRMRLTEGLSLSSGEGTVPTD*GQMAAC
Trigger: ACATGCCGCCATCTGCCCTCAGTCAGTTGGGACCGT...ACCTTCGCCGGACGAAAGGGAAAGTCCTTCAGTCAAGCGCATGCGACTCTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000197145.2
ENSMUST00000200138.5
CDS-3UTR GCA 90 bp TCTGGTGAGTCCAATGGGGGAGTGGAATTCGTTCCGGTGATCCTCTCGGTCGCTTGTAGGTGCTGCTGCTaGCAGCCAGTTACAGAGCCG +
Preference number: 4 (lower is better)
Translates to: SGESNGGVEFVPVILSVACRCCC*QPVTEP
Trigger: CGGCTCTGTAACTGGCTGGCAGCAGCAGCACCTACA...AGCGACCGAGAGGATCACCGGAACGAATTCCACTCCCCCATTGGACTCACCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR CCA 90 bp TCCCTTTCGTCCGGCGAAGGTCTGGTGAGTCCAATGGGGGAGTGGAATTCGTTCAGACGGGTGGGCCAGTaGCAGAAGATTGGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: SLSSGEGLVSPMGEWNSFRRVGQ*QKIGVS
Trigger: GGAAACCCCAATCTTCTGCCACTGGCCCACCCGTCT...GAACGAATTCCACTCCCCCATTGGACTCACCAGACCTTCGCCGGACGAAAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR CCA 90 bp TCCCTTTCGTCCGGCGAAGGTCTGGTGAGTCCAATGGGGGAGTGGAATTCGTTCATCCATTCCCTGCGCTaGTGCCTGCACCGGATGTCA +
Preference number: 4 (lower is better)
Translates to: SLSSGEGLVSPMGEWNSFIHSLR*CLHRMS
Trigger: TGACATCCGGTGCAGGCACCAGCGCAGGGAATGGAT...GAACGAATTCCACTCCCCCATTGGACTCACCAGACCTTCGCCGGACGAAAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR CCA 90 bp TTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGGACCTCCCCGCCTCGTaGCGCGTGGTGTGTTGTGGG +
Preference number: 4 (lower is better)
Translates to: LNECHTPMICLQVCERAWDLPAS*RVVCCG
Trigger: CCCACAACACACCACGCGCCACGAGGCGGGGAGGTC...CCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp GCACGTCCTACACGTGACCTGGCAGGGCTAATGTTACTGCATTCTTTGTTCTGTGACCTCCCCGCCTCGTaGCGCGTGGTGTGTTGTGGG +
Preference number: 4 (lower is better)
Translates to: ARPTRDLAGLMLLHSLFCDLPAS*RVVCCG
Trigger: CCCACAACACACCACGCGCCACGAGGCGGGGAGGTC...ACAGAACAAAGAATGCAGTAACATTAGCCCTGCCAGGTCACGTGTAGGACGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR CCA 90 bp CAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTACCGACCTCCCCGCCTCGTaGCGCGTGGTGTGTTGTGGG +
Preference number: 4 (lower is better)
Translates to: QVCERAWMLGDRRVPTITDLPAS*RVVCCG
Trigger: CCCACAACACACCACGCGCCACGAGGCGGGGAGGTC...GGTAATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp CTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTGACCTCCCCGCCTCGTaGCGCGTGGTGTGTTGTGGG +
Preference number: 4 (lower is better)
Translates to: LQVCERAWMLGDRRVPTIDLPAS*RVVCCG
Trigger: CCCACAACACACCACGCGCCACGAGGCGGGGAGGTC...AATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp TTCGTCCGGCGAAGGTCTGGTGAGTCCAATGGGGGAGTGGAATTCGTTCCGGTGGGTTTCCCAGTGTGCTaGCAGGATTGCTGTACACCA +
Preference number: 4 (lower is better)
Translates to: FVRRRSGESNGGVEFVPVGFPVC*QDCCTP
Trigger: TGGTGTACAGCAATCCTGTCAGCACACTGGGAAACC...CACCGGAACGAATTCCACTCCCCCATTGGACTCACCAGACCTTCGCCGGACGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR TCA 90 bp TTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGGACCAGCAGGCCTGGTaGGTTCCGGGGGTTGCCGTA +
Preference number: 4 (lower is better)
Translates to: LNECHTPMICLQVCERAWDQQAW*VPGVAV
Trigger: TACGGCAACCCCCGGAACTCACCAGGCCTGCTGGTC...CCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp CTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTGACCAGCAGGCCTGGTaGGTTCCGGGGGTTGCCGTA +
Preference number: 4 (lower is better)
Translates to: LQVCERAWMLGDRRVPTIDQQAW*VPGVAV
Trigger: TACGGCAACCCCCGGAACTCACCAGGCCTGCTGGTC...AATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp CAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTACCGACCAGCAGGCCTGGTaGGTTCCGGGGGTTGCCGTA +
Preference number: 4 (lower is better)
Translates to: QVCERAWMLGDRRVPTITDQQAW*VPGVAV
Trigger: TACGGCAACCCCCGGAACTCACCAGGCCTGCTGGTC...GGTAATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp ACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGGTGCAAGCTCCCAACTaGCTGAGGGCAGATGGCGGC +
Preference number: 4 (lower is better)
Translates to: TPMICLQVCERAWMLGDRVQAPN*LRADGG
Trigger: GCCGCCATCTGCCCTCAGTCAGTTGGGAGCTTGCAC...CCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp GAGTCCAATGGGGGAGTGGAATTCGTTCCGGTGATCCTCTCGGTCGCTCCCATCTCAGACTCAGGGCTGTaGCCTACTGAATCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: ESNGGVEFVPVILSVAPISDSGL*PTESSA
Trigger: TGCAGACGATTCAGTAGGTCACAGCCCTGAGTCTGA...GATGGGAGCGACCGAGAGGATCACCGGAACGAATTCCACTCCCCCATTGGACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000197722.5
CDS-3UTR GCA 90 bp CCGGTGATCCTCTCGGTCGCTCCCATCGTAGGAACTGCTACAGCTGCTCAAGCTGACATACTATTCCTCTaGAGAGACGGGTGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: PVILSVAPIVGTATAAQADILFL*RDGWAS
Trigger: ACTGGCCCACCCGTCTCTGCAGAGGAATAGTATGTC...AGCTTGAGCAGCTGTAGCAGTTCCTACGATGGGAGCGACCGAGAGGATCACCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200138.5
CDS-3UTR GCA 90 bp CGGCGAAGGTCTGGTGAGTCCAATGGGGGAGTGGAATTCGTTCCGGTGATCCTCGGCATGTTATGTAGGTaGTGCTGCTGCCAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: RRRSGESNGGVEFVPVILGMLCR*CCCQPV
Trigger: AACTGGCTGGCAGCAGCAGCACCTACATAACATGCC...GAGGATCACCGGAACGAATTCCACTCCCCCATTGGACTCACCAGACCTTCGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR CCA 90 bp AGTGGAATTCGTTCCGGTGATCCTCTCGGTCGCTCCCATCGTAGGAACTGCTACGCGCGTGGTGTGTTGTaGGTATCTCGAAGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: SGIRSGDPLGRSHRRNCYARGVL*VSRRGG
Trigger: ACCACCCCTTCGAGATACCCACAACACACCACGCGC...GTAGCAGTTCCTACGATGGGAGCGACCGAGAGGATCACCGGAACGAATTCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR CCA 90 bp TTTCCTTCCTCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTCCGCCTCGTGGCGCGTaGTGTGTTGTGGGTATCTCG +
Preference number: 4 (lower is better)
Translates to: FPSSPAPRLSPCSPPELCPPRGA*CVVGIS
Trigger: CGAGATACCCACAACACACCACGCGCCACGAGGCGG...ACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGAGGAAGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CCA 90 bp GGCTTCTGCCACCCAGCGGCAGCCTTTTACAGTGAGAAACATGTATGTAGCAACCCGCCTCGTGGCGCGTaGTGTGTTGTGGGTATCTCG +
Preference number: 4 (lower is better)
Translates to: GFCHPAAAFYSEKHVCSNPPRGA*CVVGIS
Trigger: CGAGATACCCACAACACACCACGCGCCACGAGGCGG...GTTGCTACATACATGTTTCTCACTGTAAAAGGCTGCCGCTGGGTGGCAGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR TCA 90 bp TTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACAGACCAGCAGGCCTGGTaGGTTCCGGGGGTTGCCGTA +
Preference number: 4 (lower is better)
Translates to: FLQLPVVTTCRVCPNLYTDQQAW*VPGVAV
Trigger: TACGGCAACCCCCGGAACTCACCAGGCCTGCTGGTC...TGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp ATTCGTTCCGGTGATCCTCTCGGTCGCTCCCATCGTAGGAACTGCTACAGCTGCGGGGTAGCCAATGACTaGGCCGACTGGGAGTTATTT +
Preference number: 4 (lower is better)
Translates to: IRSGDPLGRSHRRNCYSCGVAND*ADWELF
Trigger: AAATAACTCCCAGTCGGCTCAGTCATTGGCTACCCC...GCAGCTGTAGCAGTTCCTACGATGGGAGCGACCGAGAGGATCACCGGAACGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR TCA 90 bp TTTCCTTCCTCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTCACCGGGGTAGCCAATaGCTGAGCCGACTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: FPSSPAPRLSPCSPPELCHRGSQ*LSRLGV
Trigger: AACTCCCAGTCGGCTCAGTCATTGGCTACCCCGGTG...ACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGAGGAAGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR TCA 90 bp GGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCTGACAACATTGTTCCGGCGAAGGTCTGGTaGGTCCAATGGGGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: GVLTHQAVQQSYTADNIVPAKVW*VQWGSG
Trigger: TCCACTCCCCCATTGGACTCACCAGACCTTCGCCGG...AACAATGTTGTCAGCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR TCA 90 bp TTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGCCGGCGAAGGTCTGGTaGGTCCAATGGGGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: LNECHTPMICLQVCERAWPAKVW*VQWGSG
Trigger: TCCACTCCCCCATTGGACTCACCAGACCTTCGCCGG...CCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp GAGTCCAATGGGGGAGTGGAATTCGTTCCGGTGATCCTCTCGGTCGCTCCCATCCACATCCTCAGACACTaGTGGCATCGTGTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: ESNGGVEFVPVILSVAPIHILRH*WHRVLA
Trigger: AGCAAGAACACGATGCCATCAGTGTCTGAGGATGTG...GATGGGAGCGACCGAGAGGATCACCGGAACGAATTCCACTCCCCCATTGGACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
CDS-3UTR TCA 90 bp ACAGGCGTGTTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACTCTGACCCAACTGACTaGGGGCAGATGGCGGCATGT +
Preference number: 4 (lower is better)
Translates to: TGVFLQLPVVTTCRVCPNSDPTD*GQMAAC
Trigger: ACATGCCGCCATCTGCCCTCAGTCAGTTGGGTCAGA...GTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAACACGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197722.5
CDS-3UTR GCA 90 bp CAGAACTCTGTAACTTATCCATCAAGTAAAGCAGGTCGGTCGCCCCCAGGACCCTGTAGGTGCTGCTGCTaGCAGCCAGTTACAGAGCCG +
Preference number: 4 (lower is better)
Translates to: QNSVTYPSSKAGRSPPGPCRCCC*QPVTEP
Trigger: CGGCTCTGTAACTGGCTGGCAGCAGCAGCACCTACA...GGGTCCTGGGGGCGACCGACCTGCTTTACTTGATGGATAAGTTACAGAGTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR GCA 90 bp GTTCCGGTGATCCTCTCGGTCGCTCCCATCGTAGGAACTGCTACAGCTGCTCAAGGCATGTTATGTAGGTaGTGCTGCTGCCAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: VPVILSVAPIVGTATAAQGMLCR*CCCQPV
Trigger: AACTGGCTGGCAGCAGCAGCACCTACATAACATGCC...TTGAGCAGCTGTAGCAGTTCCTACGATGGGAGCGACCGAGAGGATCACCGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000197145.2
ENSMUST00000200138.5
CDS-3UTR CCA 90 bp TCCCTTTCGTCCGGCGAAGGTCTGGTGAGTCCAATGGGGGAGTGGAATTCGTTCCACTGGGATGGTAACTaGCATCTCAAAGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: SLSSGEGLVSPMGEWNSFHWDGN*HLKAGR
Trigger: CCTCCCAGCTTTGAGATGCCAGTTACCATCCCAGTG...GAACGAATTCCACTCCCCCATTGGACTCACCAGACCTTCGCCGGACGAAAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR CCA 90 bp CCTTTCGTCCGGCGAAGGTCTGGTGAGTCCAATGGGGGAGTGGAATTCGTTCCGGTTATGGCTGGACACTaGGATGGTAACTGGCATCTC +
Preference number: 4 (lower is better)
Translates to: PFVRRRSGESNGGVEFVPVMAGH*DGNWHL
Trigger: GAGATGCCAGTTACCATCCCAGTGTCCAGCCATAAC...CGGAACGAATTCCACTCCCCCATTGGACTCACCAGACCTTCGCCGGACGAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR CCA 90 bp CAGAACTCTGTAACTTATCCATCAAGTAAAGCAGGTCGGTCGCCCCCAGGACCCCTCTGCAGAGACGGGTaGGCCAGTGGCAGAAGATTG +
Preference number: 4 (lower is better)
Translates to: QNSVTYPSSKAGRSPPGPLCRDG*ASGRRL
Trigger: CAATCTTCTGCCACTGGCCCACCCGTCTCTGCAGAG...GGGTCCTGGGGGCGACCGACCTGCTTTACTTGATGGATAAGTTACAGAGTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CCA 90 bp ACAGGCGTGTTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTGCAGAGACGGGTaGGCCAGTGGCAGAAGATTG +
Preference number: 4 (lower is better)
Translates to: TGVFLQLPVVTTCRVCPNLCRDG*ASGRRL
Trigger: CAATCTTCTGCCACTGGCCCACCCGTCTCTGCAGAG...GTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAACACGCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp GTTGCCCATCCTTCAGAGAGTCGCATGCGCTTGACTGAAGGACTTTCCCTTTCGCTCTGCAGAGACGGGTaGGCCAGTGGCAGAAGATTG +
Preference number: 4 (lower is better)
Translates to: VAHPSESRMRLTEGLSLSLCRDG*ASGRRL
Trigger: CAATCTTCTGCCACTGGCCCACCCGTCTCTGCAGAG...CGAAAGGGAAAGTCCTTCAGTCAAGCGCATGCGACTCTCTGAAGGATGGGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR CCA 90 bp ATTCGTTCCGGTGATCCTCTCGGTCGCTCCCATCGTAGGAACTGCTACAGCTGCGTTCTTGCTGCCAGGTaGGATAAGAACGCGGAGATC +
Preference number: 4 (lower is better)
Translates to: IRSGDPLGRSHRRNCYSCVLAAR*DKNAEI
Trigger: GATCTCCGCGTTCTTATCCCACCTGGCAGCAAGAAC...GCAGCTGTAGCAGTTCCTACGATGGGAGCGACCGAGAGGATCACCGGAACGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR CCA 90 bp TTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGCCGCCTCGTGGCGCGTaGTGTGTTGTGGGTATCTCG +
Preference number: 4 (lower is better)
Translates to: LNECHTPMICLQVCERAWPPRGA*CVVGIS
Trigger: CGAGATACCCACAACACACCACGCGCCACGAGGCGG...CCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp GGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCTGACAACATTGTTCCGCCTCGTGGCGCGTaGTGTGTTGTGGGTATCTCG +
Preference number: 4 (lower is better)
Translates to: GVLTHQAVQQSYTADNIVPPRGA*CVVGIS
Trigger: CGAGATACCCACAACACACCACGCGCCACGAGGCGG...AACAATGTTGTCAGCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CCA 90 bp CAAGGCAGGCTAGCATCCTATATGGATACCACCAAAGGTGCATTGTGGTCTAATGACCTCCCCGCCTCGTaGCGCGTGGTGTGTTGTGGG +
Preference number: 4 (lower is better)
Translates to: QGRLASYMDTTKGALWSNDLPAS*RVVCCG
Trigger: CCCACAACACACCACGCGCCACGAGGCGGGGAGGTC...ATTAGACCACAATGCACCTTTGGTGGTATCCATATAGGATGCTAGCCTGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR CCA 90 bp CTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTGACCTCCCCGCCTCGTaGCGCGTGGTGTGTTGTGGG +
Preference number: 4 (lower is better)
Translates to: LQLPVVTTCRVCPNLYTFDLPAS*RVVCCG
Trigger: CCCACAACACACCACGCGCCACGAGGCGGGGAGGTC...AAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp CAGAACTCTGTAACTTATCCATCAAGTAAAGCAGGTCGGTCGCCCCCAGGACCCTGCCTCCACAATGTCTaGGTTTGTCCGGCTCTCGTG +
Preference number: 4 (lower is better)
Translates to: QNSVTYPSSKAGRSPPGPCLHNV*VCPALV
Trigger: CACGAGAGCCGGACAAACTCAGACATTGTGGAGGCA...GGGTCCTGGGGGCGACCGACCTGCTTTACTTGATGGATAAGTTACAGAGTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000005722.14
ENSMUST00000185052.6
CDS-3UTR TCA 90 bp ACTGATGGCATCGTGTTCTTGCTGCCAGGTGGGATAAGAACGCGGAGATCTGGCGGTTTCCCAGTGTGCTaGCAGGATTGCTGTACACCA +
Preference number: 4 (lower is better)
Translates to: TDGIVFLLPGGIRTRRSGGFPVC*QDCCTP
Trigger: TGGTGTACAGCAATCCTGTCAGCACACTGGGAAACC...GCCAGATCTCCGCGTTCTTATCCCACCTGGCAGCAAGAACACGATGCCATCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198360.2
CDS-3UTR TCA 90 bp CCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTCTATATGGACCAGCAGGCCTGGTaGGTTCCGGGGGTTGCCGTA +
Preference number: 4 (lower is better)
Translates to: PVVTTCRVCPNLYTFFYMDQQAW*VPGVAV
Trigger: TACGGCAACCCCCGGAACTCACCAGGCCTGCTGGTC...CATATAGAAAAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp ATCCTTTTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGACCAGCAGGCCTGGTaGGTTCCGGGGGTTGCCGTA +
Preference number: 4 (lower is better)
Translates to: ILLNECHTPMICLQVCERDQQAW*VPGVAV
Trigger: TACGGCAACCCCCGGAACTCACCAGGCCTGCTGGTC...ACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAAAAGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp ACTTTCCCTTTCGTCCGGCGAAGGTCTGGTGAGTCCAATGGGGGAGTGGAATTCGGGGTAGCCAATGACTaGGCCGACTGGGAGTTATTT +
Preference number: 4 (lower is better)
Translates to: TFPFVRRRSGESNGGVEFGVAND*ADWELF
Trigger: AAATAACTCCCAGTCGGCTCAGTCATTGGCTACCCC...GAATTCCACTCCCCCATTGGACTCACCAGACCTTCGCCGGACGAAAGGGAAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR TCA 90 bp TTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGCACCGGGGTAGCCAATaGCTGAGCCGACTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: LNECHTPMICLQVCERAWHRGSQ*LSRLGV
Trigger: AACTCCCAGTCGGCTCAGTCATTGGCTACCCCGGTG...CCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp ACTTTCCCTTTCGTCCGGCGAAGGTCTGGTGAGTCCAATGGGGGAGTGGAATTCGAAGCCAGACAGAGATaGCAGATCTGCGCTACTCAG +
Preference number: 4 (lower is better)
Translates to: TFPFVRRRSGESNGGVEFEARQR*QICATQ
Trigger: CTGAGTAGCGCAGATCTGTCATCTCTGTCTGGCTTC...GAATTCCACTCCCCCATTGGACTCACCAGACCTTCGCCGGACGAAAGGGAAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR TCA 90 bp GAAGTGACATTTGGGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCTGGAATTCGTTCCGGTaGTCCTCTCGGTCGCTCCCA +
Preference number: 4 (lower is better)
Translates to: EVTFGGPDTPGCSTVLYCWNSFR*SSRSLP
Trigger: TGGGAGCGACCGAGAGGATCACCGGAACGAATTCCA...GCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCCCAAATGTCACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR TCA 90 bp TTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACACCGGCGAAGGTCTGGTaGGTCCAATGGGGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: FLQLPVVTTCRVCPNLYTPAKVW*VQWGSG
Trigger: TCCACTCCCCCATTGGACTCACCAGACCTTCGCCGG...TGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp CAGAACTCTGTAACTTATCCATCAAGTAAAGCAGGTCGGTCGCCCCCAGGACCCAGGGCTGTGACCTACTaGATCGTCTGCATCGGGATC +
Preference number: 4 (lower is better)
Translates to: QNSVTYPSSKAGRSPPGPRAVTY*IVCIGI
Trigger: GATCCCGATGCAGACGATTCAGTAGGTCACAGCCCT...GGGTCCTGGGGGCGACCGACCTGCTTTACTTGATGGATAAGTTACAGAGTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR TCA 90 bp AGGACTTTCCCTTTCGTCCGGCGAAGGTCTGGTGAGTCCAATGGGGGAGTGGAACACATCCTCAGACACTaGTGGCATCGTGTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: RTFPFVRRRSGESNGGVEHILRH*WHRVLA
Trigger: AGCAAGAACACGATGCCATCAGTGTCTGAGGATGTG...TTCCACTCCCCCATTGGACTCACCAGACCTTCGCCGGACGAAAGGGAAAGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
CDS-3UTR TCA 90 bp CAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTACCGGTCTCCCAACTGACTaGGGGCAGATGGCGGCATGT +
Preference number: 4 (lower is better)
Translates to: QVCERAWMLGDRRVPTITGLPTD*GQMAAC
Trigger: ACATGCCGCCATCTGCCCTCAGTCAGTTGGGAGACC...GGTAATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199432.5
CDS-3UTR TCA 90 bp GGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCTGACAACATTGTTGGTCTCCCAACTGACTaGGGGCAGATGGCGGCATGT +
Preference number: 4 (lower is better)
Translates to: GVLTHQAVQQSYTADNIVGLPTD*GQMAAC
Trigger: ACATGCCGCCATCTGCCCTCAGTCAGTTGGGAGACC...AACAATGTTGTCAGCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000197146.5
ENSMUST00000199432.5
CDS-3UTR GCA 90 bp ACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGTTTGTCCGGCTCTCGTaGGGCTCGTTGTACTCGGTG +
Preference number: 4 (lower is better)
Translates to: TPMICLQVCERAWMLGDRFVRLS*GSLYSV
Trigger: CACCGAGTACAACGAGCCGCACGAGAGCCGGACAAA...CCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp GAAGTGACATTTGGGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCTTTGTCCGGCTCTCGTaGGGCTCGTTGTACTCGGTG +
Preference number: 4 (lower is better)
Translates to: EVTFGGPDTPGCSTVLYCFVRLS*GSLYSV
Trigger: CACCGAGTACAACGAGCCGCACGAGAGCCGGACAAA...GCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCCCAAATGTCACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR GCA 90 bp GGCATCGTGTTCTTGCTGCCAGGTGGGATAAGAACGCGGAGATCTGGCTTACGAGACATACTATTCCTCTaGAGAGACGGGTGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: GIVFLLPGGIRTRRSGLRDILFL*RDGWAS
Trigger: ACTGGCCCACCCGTCTCTGCAGAGGAATAGTATGTC...TCGTAAGCCAGATCTCCGCGTTCTTATCCCACCTGGCAGCAAGAACACGATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198360.2
CDS-3UTR GCA 90 bp ATTCGTTCCGGTGATCCTCTCGGTCGCTCCCATCGTAGGAACTGCTACAGCTGCACCGCCTGTGTTACCTaGACTTGGAGGTCTATGTGT +
Preference number: 4 (lower is better)
Translates to: IRSGDPLGRSHRRNCYSCTACVT*TWRSMC
Trigger: ACACATAGACCTCCAAGTGCAGGTAACACAGGCGGT...GCAGCTGTAGCAGTTCCTACGATGGGAGCGACCGAGAGGATCACCGGAACGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR GCA 90 bp CGAAGGTCTGGTGAGTCCAATGGGGGAGTGGAATTCGTTCCGGTGATCCTCTCGTTATGTAGGTGCTGCTaGTGCCAGCCAGTTACAGAG +
Preference number: 4 (lower is better)
Translates to: RRSGESNGGVEFVPVILSLCRCC*CQPVTE
Trigger: CTCTGTAACTGGCTGGCAGCAGCAGCACCTACATAA...CGAGAGGATCACCGGAACGAATTCCACTCCCCCATTGGACTCACCAGACCTTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR GCA 90 bp AGGACTTTCCCTTTCGTCCGGCGAAGGTCTGGTGAGTCCAATGGGGGAGTGGAATTATGTAGGTGCTGCTaGTGCCAGCCAGTTACAGAG +
Preference number: 4 (lower is better)
Translates to: RTFPFVRRRSGESNGGVELCRCC*CQPVTE
Trigger: CTCTGTAACTGGCTGGCAGCAGCAGCACCTACATAA...TTCCACTCCCCCATTGGACTCACCAGACCTTCGCCGGACGAAAGGGAAAGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR CCA 90 bp GAAGTGACATTTGGGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCCTCTGCAGAGACGGGTaGGCCAGTGGCAGAAGATTG +
Preference number: 4 (lower is better)
Translates to: EVTFGGPDTPGCSTVLYCLCRDG*ASGRRL
Trigger: CAATCTTCTGCCACTGGCCCACCCGTCTCTGCAGAG...GCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCCCAAATGTCACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CCA 90 bp CTTCCTCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTAACTATCCATTCCCTGCGCTaGTGCCTGCACCGGATGTCA +
Preference number: 4 (lower is better)
Translates to: LPLQHPGFHLVLLQNSVTIHSLR*CLHRMS
Trigger: TGACATCCGGTGCAGGCACCAGCGCAGGGAATGGAT...AGTTACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CCA 90 bp CATGTTGCCCATCCTTCAGAGAGTCGCATGCGCTTGACTGAAGGACTTTCCCTTGCGCGTGGTGTGTTGTaGGTATCTCGAAGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: HVAHPSESRMRLTEGLSLARGVL*VSRRGG
Trigger: ACCACCCCTTCGAGATACCCACAACACACCACGCGC...AAGGGAAAGTCCTTCAGTCAAGCGCATGCGACTCTCTGAAGGATGGGCAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR CCA 90 bp TTTCCTTCCTCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTGCGCGTGGTGTGTTGTaGGTATCTCGAAGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: FPSSPAPRLSPCSPPELCARGVL*VSRRGG
Trigger: ACCACCCCTTCGAGATACCCACAACACACCACGCGC...ACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGAGGAAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CCA 90 bp CAGAACTCTGTAACTTATCCATCAAGTAAAGCAGGTCGGTCGCCCCCAGGACCCGTCTGCATCGGGATCTaGGCTGTCACAGCCATTGAG +
Preference number: 4 (lower is better)
Translates to: QNSVTYPSSKAGRSPPGPVCIGI*AVTAIE
Trigger: CTCAATGGCTGTGACAGCCCAGATCCCGATGCAGAC...GGGTCCTGGGGGCGACCGACCTGCTTTACTTGATGGATAAGTTACAGAGTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CCA 90 bp ACAGGCGTGTTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACATCTCGAAGGGGTGGTaGTACGGTCTCCCAACTGAC +
Preference number: 4 (lower is better)
Translates to: TGVFLQLPVVTTCRVCPNISKGW*YGLPTD
Trigger: GTCAGTTGGGAGACCGTACCACCACCCCTTCGAGAT...GTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAACACGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199432.5
3UTR CAA 72 bp GATCATGTTGCCCATCCTTCAGAGAGTCGCATGCGCTaGACTGAAGGACTTTCCCTTTCGTCCGGCGAAGGT +
Preference number: 4 (lower is better)
Translates to: DHVAHPSESRMR*TEGLSLSSGEG
Trigger: ACCTTCGCCGGACGAAAGGGAAAGTCCTTCAGTCAAGCGCATGCGACTCTCTGAAGGATGGGCAACATGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR TCA 90 bp ACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGTGCCTCCACAATGTCTaGGTTTGTCCGGCTCTCGTG +
Preference number: 4 (lower is better)
Translates to: TPMICLQVCERAWMLGDRCLHNV*VCPALV
Trigger: CACGAGAGCCGGACAAACTCAGACATTGTGGAGGCA...CCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000185052.6
ENSMUST00000198199.5
CDS-3UTR TCA 90 bp ACAGGCGTGTTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACGGTTTCCCAGTGTGCTaGCAGGATTGCTGTACACCA +
Preference number: 4 (lower is better)
Translates to: TGVFLQLPVVTTCRVCPNGFPVC*QDCCTP
Trigger: TGGTGTACAGCAATCCTGTCAGCACACTGGGAAACC...GTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAACACGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp AGCTTGCAGGACTTAGGCTCCAACACAGCTTCTTACTCTGGGCATATTTCTAAAGACCAGCAGGCCTGGTaGGTTCCGGGGGTTGCCGTA +
Preference number: 4 (lower is better)
Translates to: SLQDLGSNTASYSGHISKDQQAW*VPGVAV
Trigger: TACGGCAACCCCCGGAACTCACCAGGCCTGCTGGTC...TTTAGAAATATGCCCAGAGTAAGAAGCTGTGTTGGAGCCTAAGTCCTGCAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR TCA 90 bp TTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACACACCGGGGTAGCCAATaGCTGAGCCGACTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: FLQLPVVTTCRVCPNLYTHRGSQ*LSRLGV
Trigger: AACTCCCAGTCGGCTCAGTCATTGGCTACCCCGGTG...TGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp CCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTCACCGGGGTAGCCAATaGCTGAGCCGACTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: PTITGSHHLPGLSKPLYIHRGSQ*LSRLGV
Trigger: AACTCCCAGTCGGCTCAGTCATTGGCTACCCCGGTG...AATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp ACAGGCGTGTTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACGAAGCCAGACAGAGATaGCAGATCTGCGCTACTCAG +
Preference number: 4 (lower is better)
Translates to: TGVFLQLPVVTTCRVCPNEARQR*QICATQ
Trigger: CTGAGTAGCGCAGATCTGTCATCTCTGTCTGGCTTC...GTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAACACGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp GTTGCCCATCCTTCAGAGAGTCGCATGCGCTTGACTGAAGGACTTTCCCTTTCGGAAGCCAGACAGAGATaGCAGATCTGCGCTACTCAG +
Preference number: 4 (lower is better)
Translates to: VAHPSESRMRLTEGLSLSEARQR*QICATQ
Trigger: CTGAGTAGCGCAGATCTGTCATCTCTGTCTGGCTTC...CGAAAGGGAAAGTCCTTCAGTCAAGCGCATGCGACTCTCTGAAGGATGGGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR TCA 90 bp CTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTGTGCAAGCTCCCAACTaGCTGAGGGCAGATGGCGGC +
Preference number: 4 (lower is better)
Translates to: LQLPVVTTCRVCPNLYTFVQAPN*LRADGG
Trigger: GCCGCCATCTGCCCTCAGTCAGTTGGGAGCTTGCAC...AAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp CTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTTGGAATTCGTTCCGGTaGTCCTCTCGGTCGCTCCCA +
Preference number: 4 (lower is better)
Translates to: LQVCERAWMLGDRRVPTIWNSFR*SSRSLP
Trigger: TGGGAGCGACCGAGAGGATCACCGGAACGAATTCCA...AATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp CAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTACCTGGAATTCGTTCCGGTaGTCCTCTCGGTCGCTCCCA +
Preference number: 4 (lower is better)
Translates to: QVCERAWMLGDRRVPTITWNSFR*SSRSLP
Trigger: TGGGAGCGACCGAGAGGATCACCGGAACGAATTCCA...GGTAATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp ACAGGCGTGTTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACTCGCATGCGCTTGACTaGAGGACTTTCCCTTTCGTC +
Preference number: 4 (lower is better)
Translates to: TGVFLQLPVVTTCRVCPNSHALD*RTFPFV
Trigger: GACGAAAGGGAAAGTCCTTCAGTCAAGCGCATGCGA...GTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAACACGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp ACAGGCGTGTTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACTGTCTCCACAATGTCTaGGTTTGTCCGGCTCTCGTG +
Preference number: 4 (lower is better)
Translates to: TGVFLQLPVVTTCRVCPNCLHNV*VCPALV
Trigger: CACGAGAGCCGGACAAACTCAGACATTGTGGAGACA...GTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAACACGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp CAGAACTCTGTAACTTATCCATCAAGTAAAGCAGGTCGGTCGCCCCCAGGACCCTGTCTCCACAATGTCTaGGTTTGTCCGGCTCTCGTG +
Preference number: 4 (lower is better)
Translates to: QNSVTYPSSKAGRSPPGPCLHNV*VCPALV
Trigger: CACGAGAGCCGGACAAACTCAGACATTGTGGAGACA...GGGTCCTGGGGGCGACCGACCTGCTTTACTTGATGGATAAGTTACAGAGTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR TCA 90 bp ACAGGCGTGTTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACGGCTGTCACAGCCATTaGGGCCCTTCTTTCTCAATG +
Preference number: 4 (lower is better)
Translates to: TGVFLQLPVVTTCRVCPNGCHSH*GPSFSM
Trigger: CATTGAGAAAGAAGGGCCTCAATGGCTGTGACAGCC...GTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAACACGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp TTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACAGGTCTCCCAACTGACTaGGGGCAGATGGCGGCATGT +
Preference number: 4 (lower is better)
Translates to: FLQLPVVTTCRVCPNLYTGLPTD*GQMAAC
Trigger: ACATGCCGCCATCTGCCCTCAGTCAGTTGGGAGACC...TGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199432.5
CDS-3UTR TCA 90 bp CTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTGTACGGTCTCCCAACTaGCTGAGGGCAGATGGCGGC +
Preference number: 4 (lower is better)
Translates to: LQLPVVTTCRVCPNLYTFVRSPN*LRADGG
Trigger: GCCGCCATCTGCCCTCAGTCAGTTGGGAGACCGTAC...AAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199432.5
CDS-3UTR GCA 90 bp GCACGTCCTACACGTGACCTGGCAGGGCTAATGTTACTGCATTCTTTGTTCTGTTTTGTCCGGCTCTCGTaGGGCTCGTTGTACTCGGTG +
Preference number: 4 (lower is better)
Translates to: ARPTRDLAGLMLLHSLFCFVRLS*GSLYSV
Trigger: CACCGAGTACAACGAGCCGCACGAGAGCCGGACAAA...ACAGAACAAAGAATGCAGTAACATTAGCCCTGCCAGGTCACGTGTAGGACGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR GCA 90 bp CTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTTTTGTCCGGCTCTCGTaGGGCTCGTTGTACTCGGTG +
Preference number: 4 (lower is better)
Translates to: LQVCERAWMLGDRRVPTIFVRLS*GSLYSV
Trigger: CACCGAGTACAACGAGCCGCACGAGAGCCGGACAAA...AATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp CAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTACCTTTGTCCGGCTCTCGTaGGGCTCGTTGTACTCGGTG +
Preference number: 4 (lower is better)
Translates to: QVCERAWMLGDRRVPTITFVRLS*GSLYSV
Trigger: CACCGAGTACAACGAGCCGCACGAGAGCCGGACAAA...GGTAATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp CAGAACTCTGTAACTTATCCATCAAGTAAAGCAGGTCGGTCGCCCCCAGGACCCGACATACTATTCCTCTaGAGAGACGGGTGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: QNSVTYPSSKAGRSPPGPDILFL*RDGWAS
Trigger: ACTGGCCCACCCGTCTCTGCAGAGGAATAGTATGTC...GGGTCCTGGGGGCGACCGACCTGCTTTACTTGATGGATAAGTTACAGAGTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR GCA 90 bp ACTGATGGCATCGTGTTCTTGCTGCCAGGTGGGATAAGAACGCGGAGATCTGGCACCGCCTGTGTTACCTaGACTTGGAGGTCTATGTGT +
Preference number: 4 (lower is better)
Translates to: TDGIVFLLPGGIRTRRSGTACVT*TWRSMC
Trigger: ACACATAGACCTCCAAGTGCAGGTAACACAGGCGGT...GCCAGATCTCCGCGTTCTTATCCCACCTGGCAGCAAGAACACGATGCCATCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198360.2
CDS-3UTR GCA 90 bp ATTCGTTCCGGTGATCCTCTCGGTCGCTCCCATCGTAGGAACTGCTACAGCTGCATGTTATGTAGGTGCTaGTGCTGCCAGCCAGTTACA +
Preference number: 4 (lower is better)
Translates to: IRSGDPLGRSHRRNCYSCMLCRC*CCQPVT
Trigger: TGTAACTGGCTGGCAGCAGCAGCACCTACATAACAT...GCAGCTGTAGCAGTTCCTACGATGGGAGCGACCGAGAGGATCACCGGAACGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR GCA 90 bp AGGACTTTCCCTTTCGTCCGGCGAAGGTCTGGTGAGTCCAATGGGGGAGTGGAAATGTTATGTAGGTGCTaGTGCTGCCAGCCAGTTACA +
Preference number: 4 (lower is better)
Translates to: RTFPFVRRRSGESNGGVEMLCRC*CCQPVT
Trigger: TGTAACTGGCTGGCAGCAGCAGCACCTACATAACAT...TTCCACTCCCCCATTGGACTCACCAGACCTTCGCCGGACGAAAGGGAAAGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR GCA 90 bp ACAGGCGTGTTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACGGCATGTTATGTAGGTaGTGCTGCTGCCAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: TGVFLQLPVVTTCRVCPNGMLCR*CCCQPV
Trigger: AACTGGCTGGCAGCAGCAGCACCTACATAACATGCC...GTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAACACGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp CAGAACTCTGTAACTTATCCATCAAGTAAAGCAGGTCGGTCGCCCCCAGGACCCGGCATGTTATGTAGGTaGTGCTGCTGCCAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: QNSVTYPSSKAGRSPPGPGMLCR*CCCQPV
Trigger: AACTGGCTGGCAGCAGCAGCACCTACATAACATGCC...GGGTCCTGGGGGCGACCGACCTGCTTTACTTGATGGATAAGTTACAGAGTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CCA 90 bp CAGAACTCTGTAACTTATCCATCAAGTAAAGCAGGTCGGTCGCCCCCAGGACCCCTGGCATCTCAAAGCTaGGAGGTGGAACAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: QNSVTYPSSKAGRSPPGPLASQS*EVEQQE
Trigger: TTCCTGCTGTTCCACCTCCCAGCTTTGAGATGCCAG...GGGTCCTGGGGGCGACCGACCTGCTTTACTTGATGGATAAGTTACAGAGTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
CDS-3UTR CCA 90 bp ACAGGCGTGTTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCACTGGGATGGTAACTaGCATCTCAAAGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: TGVFLQLPVVTTCRVCPNHWDGN*HLKAGR
Trigger: CCTCCCAGCTTTGAGATGCCAGTTACCATCCCAGTG...GTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAACACGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp CTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTAGACGGGTGGGCCAGTaGCAGAAGATTGGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: LQVCERAWMLGDRRVPTIRRVGQ*QKIGVS
Trigger: GGAAACCCCAATCTTCTGCCACTGGCCCACCCGTCT...AATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp TTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGAGACGGGTGGGCCAGTaGCAGAAGATTGGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: LNECHTPMICLQVCERAWRRVGQ*QKIGVS
Trigger: GGAAACCCCAATCTTCTGCCACTGGCCCACCCGTCT...CCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp CAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTACCAGACGGGTGGGCCAGTaGCAGAAGATTGGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: QVCERAWMLGDRRVPTITRRVGQ*QKIGVS
Trigger: GGAAACCCCAATCTTCTGCCACTGGCCCACCCGTCT...GGTAATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp TCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTAACTTATCCCTCTGCAGAGACGGGTaGGCCAGTGGCAGAAGATTG +
Preference number: 4 (lower is better)
Translates to: SPAPRLSPCSPPELCNLSLCRDG*ASGRRL
Trigger: CAATCTTCTGCCACTGGCCCACCCGTCTCTGCAGAG...GGATAAGTTACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CCA 90 bp CTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTATCCATTCCCTGCGCTaGTGCCTGCACCGGATGTCA +
Preference number: 4 (lower is better)
Translates to: LQVCERAWMLGDRRVPTIIHSLR*CLHRMS
Trigger: TGACATCCGGTGCAGGCACCAGCGCAGGGAATGGAT...AATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp TTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGATCCATTCCCTGCGCTaGTGCCTGCACCGGATGTCA +
Preference number: 4 (lower is better)
Translates to: LNECHTPMICLQVCERAWIHSLR*CLHRMS
Trigger: TGACATCCGGTGCAGGCACCAGCGCAGGGAATGGAT...CCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp TTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGGCGCGTGGTGTGTTGTaGGTATCTCGAAGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: LNECHTPMICLQVCERAWARGVL*VSRRGG
Trigger: ACCACCCCTTCGAGATACCCACAACACACCACGCGC...CCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp GGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCTGACAACATTGTTGCGCGTGGTGTGTTGTaGGTATCTCGAAGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: GVLTHQAVQQSYTADNIVARGVL*VSRRGG
Trigger: ACCACCCCTTCGAGATACCCACAACACACCACGCGC...AACAATGTTGTCAGCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CCA 90 bp CAAGGCAGGCTAGCATCCTATATGGATACCACCAAAGGTGCATTGTGGTCTAATCCGCCTCGTGGCGCGTaGTGTGTTGTGGGTATCTCG +
Preference number: 4 (lower is better)
Translates to: QGRLASYMDTTKGALWSNPPRGA*CVVGIS
Trigger: CGAGATACCCACAACACACCACGCGCCACGAGGCGG...ATTAGACCACAATGCACCTTTGGTGGTATCCATATAGGATGCTAGCCTGCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR CCA 90 bp ATCCTTTTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTCCGCCTCGTGGCGCGTaGTGTGTTGTGGGTATCTCG +
Preference number: 4 (lower is better)
Translates to: ILLNECHTPMICLQVCERPPRGA*CVVGIS
Trigger: CGAGATACCCACAACACACCACGCGCCACGAGGCGG...ACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAAAAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp GAAGTGACATTTGGGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCGTCTGCATCGGGATCTaGGCTGTCACAGCCATTGAG +
Preference number: 4 (lower is better)
Translates to: EVTFGGPDTPGCSTVLYCVCIGI*AVTAIE
Trigger: CTCAATGGCTGTGACAGCCCAGATCCCGATGCAGAC...GCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCCCAAATGTCACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CCA 90 bp ACAGGCGTGTTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTGGCATCTCAAAGCTaGGAGGTGGAACAGCACACA +
Preference number: 4 (lower is better)
Translates to: TGVFLQLPVVTTCRVCPNLASQS*EVEQHT
Trigger: TGTGTGCTGTTCCACCTCCCAGCTTTGAGATGCCAG...GTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAACACGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp CTTCCTCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTAACTGGTATCTCGAAGGGGTaGTGGTACGGTCTCCCAACT +
Preference number: 4 (lower is better)
Translates to: LPLQHPGFHLVLLQNSVTGISKG*WYGLPT
Trigger: AGTTGGGAGACCGTACCACCACCCCTTCGAGATACC...AGTTACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000197146.5
ENSMUST00000199432.5
CDS-3UTR CCA 90 bp ACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGGGTATCTCGAAGGGGTaGTGGTACGGTCTCCCAACT +
Preference number: 4 (lower is better)
Translates to: TPMICLQVCERAWMLGDRGISKG*WYGLPT
Trigger: AGTTGGGAGACCGTACCACCACCCCTTCGAGATACC...CCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199432.5
CDS-3UTR CCA 90 bp GAAGTGACATTTGGGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCGGTATCTCGAAGGGGTaGTGGTACGGTCTCCCAACT +
Preference number: 4 (lower is better)
Translates to: EVTFGGPDTPGCSTVLYCGISKG*WYGLPT
Trigger: AGTTGGGAGACCGTACCACCACCCCTTCGAGATACC...GCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCCCAAATGTCACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000197146.5
ENSMUST00000199432.5
CDS-3UTR TCA 90 bp CTTCCTCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTAACTGGTTTCCCAGTGTGCTaGCAGGATTGCTGTACACCA +
Preference number: 4 (lower is better)
Translates to: LPLQHPGFHLVLLQNSVTGFPVC*QDCCTP
Trigger: TGGTGTACAGCAATCCTGTCAGCACACTGGGAAACC...AGTTACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGAGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR TCA 90 bp TGGGGGAGTGGAATTCGTTCCGGTGATCCTCTCGGTCGCTCCCATCGTAGGAACTATCCTTTGATTCACTaGTGGCATCGTGTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: WGSGIRSGDPLGRSHRRNYPLIH*WHRVLA
Trigger: AGCAAGAACACGATGCCATCAGTGAATCAAAGGATA...GTTCCTACGATGGGAGCGACCGAGAGGATCACCGGAACGAATTCCACTCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000200138.5
CDS-3UTR TCA 90 bp ACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGGGGGTAGCCAATGACTaGGCCGACTGGGAGTTATTT +
Preference number: 4 (lower is better)
Translates to: TPMICLQVCERAWMLGDRGVAND*ADWELF
Trigger: AAATAACTCCCAGTCGGCTCAGTCATTGGCTACCCC...CCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp ACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGGAAGCCAGACAGAGATaGCAGATCTGCGCTACTCAG +
Preference number: 4 (lower is better)
Translates to: TPMICLQVCERAWMLGDREARQR*QICATQ
Trigger: CTGAGTAGCGCAGATCTGTCATCTCTGTCTGGCTTC...CCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp TTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACAAAGCTCCCAACTGACTaGGGGCAGATGGCGGCATGT +
Preference number: 4 (lower is better)
Translates to: FLQLPVVTTCRVCPNLYTKLPTD*GQMAAC
Trigger: ACATGCCGCCATCTGCCCTCAGTCAGTTGGGAGCTT...TGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp AGAGTACACTGCTGCATTCAAACCACAACTAGAATCCAACACTTAGCGAACCTCGTGCAAGCTCCCAACTaGCTGAGGGCAGATGGCGGC +
Preference number: 4 (lower is better)
Translates to: RVHCCIQTTTRIQHLANLVQAPN*LRADGG
Trigger: GCCGCCATCTGCCCTCAGTCAGTTGGGAGCTTGCAC...GAGGTTCGCTAAGTGTTGGATTCTAGTTGTGGTTTGAATGCAGCAGTGTACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
CDS-3UTR TCA 90 bp GTTATCTTGGTTAGCAAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTGTGCAAGCTCCCAACTaGCTGAGGGCAGATGGCGGC +
Preference number: 4 (lower is better)
Translates to: VILVSKAWRSSWLRVVLSVQAPN*LRADGG
Trigger: GCCGCCATCTGCCCTCAGTCAGTTGGGAGCTTGCAC...AGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTTGCTAACCAAGATAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp ACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTCCGGCGAAGGTCTGGTaGGTCCAATGGGGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: TITGSHHLPGLSKPLYIFPAKVW*VQWGSG
Trigger: TCCACTCCCCCATTGGACTCACCAGACCTTCGCCGG...AAAAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp GTTATCTTGGTTAGCAAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTCCGGCGAAGGTCTGGTaGGTCCAATGGGGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: VILVSKAWRSSWLRVVLSPAKVW*VQWGSG
Trigger: TCCACTCCCCCATTGGACTCACCAGACCTTCGCCGG...AGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTTGCTAACCAAGATAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp ACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGTCGCATGCGCTTGACTaGAGGACTTTCCCTTTCGTC +
Preference number: 4 (lower is better)
Translates to: TPMICLQVCERAWMLGDRSHALD*RTFPFV
Trigger: GACGAAAGGGAAAGTCCTTCAGTCAAGCGCATGCGA...CCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp GGCTTCTGCCACCCAGCGGCAGCCTTTTACAGTGAGAAACATGTATGTAGCAACTGTCTCCACAATGTCTaGGTTTGTCCGGCTCTCGTG +
Preference number: 4 (lower is better)
Translates to: GFCHPAAAFYSEKHVCSNCLHNV*VCPALV
Trigger: CACGAGAGCCGGACAAACTCAGACATTGTGGAGACA...GTTGCTACATACATGTTTCTCACTGTAAAAGGCTGCCGCTGGGTGGCAGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR TCA 90 bp GAAGTGACATTTGGGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCTGTCTCCACAATGTCTaGGTTTGTCCGGCTCTCGTG +
Preference number: 4 (lower is better)
Translates to: EVTFGGPDTPGCSTVLYCCLHNV*VCPALV
Trigger: CACGAGAGCCGGACAAACTCAGACATTGTGGAGACA...GCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCCCAAATGTCACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR TCA 90 bp ACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGTGTCTCCACAATGTCTaGGTTTGTCCGGCTCTCGTG +
Preference number: 4 (lower is better)
Translates to: TPMICLQVCERAWMLGDRCLHNV*VCPALV
Trigger: CACGAGAGCCGGACAAACTCAGACATTGTGGAGACA...CCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp GAAGTGACATTTGGGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCGGCTGTCACAGCCATTaGGGCCCTTCTTTCTCAATG +
Preference number: 4 (lower is better)
Translates to: EVTFGGPDTPGCSTVLYCGCHSH*GPSFSM
Trigger: CATTGAGAAAGAAGGGCCTCAATGGCTGTGACAGCC...GCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCCCAAATGTCACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR TCA 90 bp CAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTACCAGGGCTGTGACCTACTaGATCGTCTGCATCGGGATC +
Preference number: 4 (lower is better)
Translates to: QVCERAWMLGDRRVPTITRAVTY*IVCIGI
Trigger: GATCCCGATGCAGACGATTCAGTAGGTCACAGCCCT...GGTAATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp TTTCCTTCCTCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTTCAGACTCAGGGCTGTaGCCTACTGAATCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: FPSSPAPRLSPCSPPELCSDSGL*PTESSA
Trigger: TGCAGACGATTCAGTAGGTCACAGCCCTGAGTCTGA...ACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGAGGAAGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR TCA 90 bp ACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGTCAGACTCAGGGCTGTaGCCTACTGAATCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: TPMICLQVCERAWMLGDRSDSGL*PTESSA
Trigger: TGCAGACGATTCAGTAGGTCACAGCCCTGAGTCTGA...CCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp CAGAACTCTGTAACTTATCCATCAAGTAAAGCAGGTCGGTCGCCCCCAGGACCCCACATCCTCAGACACTaGTGGCATCGTGTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: QNSVTYPSSKAGRSPPGPHILRH*WHRVLA
Trigger: AGCAAGAACACGATGCCATCAGTGTCTGAGGATGTG...GGGTCCTGGGGGCGACCGACCTGCTTTACTTGATGGATAAGTTACAGAGTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR TCA 90 bp ATCCTTTTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGGTCTCCCAACTGACTaGGGGCAGATGGCGGCATGT +
Preference number: 4 (lower is better)
Translates to: ILLNECHTPMICLQVCERGLPTD*GQMAAC
Trigger: ACATGCCGCCATCTGCCCTCAGTCAGTTGGGAGACC...ACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAAAAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199432.5
CDS-3UTR TCA 90 bp ACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTGTACGGTCTCCCAACTaGCTGAGGGCAGATGGCGGC +
Preference number: 4 (lower is better)
Translates to: TITGSHHLPGLSKPLYIFVRSPN*LRADGG
Trigger: GCCGCCATCTGCCCTCAGTCAGTTGGGAGACCGTAC...AAAAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199432.5
CDS-3UTR GCA 90 bp TTTCCTTCCTCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTAGTGCGTGGGGTGAGTaGATAAGAGGAGTCAGGATC +
Preference number: 4 (lower is better)
Translates to: FPSSPAPRLSPCSPPELCSAWGE*IRGVRI
Trigger: GATCCTGACTCCTCTTATGCACTCACCCCACGCACT...ACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGAGGAAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
CDS-3UTR GCA 90 bp ACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGGACATACTATTCCTCTaGAGAGACGGGTGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: TPMICLQVCERAWMLGDRDILFL*RDGWAS
Trigger: ACTGGCCCACCCGTCTCTGCAGAGGAATAGTATGTC...CCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp CAGAACTCTGTAACTTATCCATCAAGTAAAGCAGGTCGGTCGCCCCCAGGACCCACCGCCTGTGTTACCTaGACTTGGAGGTCTATGTGT +
Preference number: 4 (lower is better)
Translates to: QNSVTYPSSKAGRSPPGPTACVT*TWRSMC
Trigger: ACACATAGACCTCCAAGTGCAGGTAACACAGGCGGT...GGGTCCTGGGGGCGACCGACCTGCTTTACTTGATGGATAAGTTACAGAGTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR GCA 90 bp ACAGGCGTGTTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACACCGCCTGTGTTACCTaGACTTGGAGGTCTATGTGT +
Preference number: 4 (lower is better)
Translates to: TGVFLQLPVVTTCRVCPNTACVT*TWRSMC
Trigger: ACACATAGACCTCCAAGTGCAGGTAACACAGGCGGT...GTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAACACGCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp TTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATGTAGGTGCTGCTGCTaGCAGCCAGTTACAGAGCCG +
Preference number: 4 (lower is better)
Translates to: FLQLPVVTTCRVCPNLYTCRCCC*QPVTEP
Trigger: CGGCTCTGTAACTGGCTGGCAGCAGCAGCACCTACA...TGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp CAGAACTCTGTAACTTATCCATCAAGTAAAGCAGGTCGGTCGCCCCCAGGACCCTTATGTAGGTGCTGCTaGTGCCAGCCAGTTACAGAG +
Preference number: 4 (lower is better)
Translates to: QNSVTYPSSKAGRSPPGPLCRCC*CQPVTE
Trigger: CTCTGTAACTGGCTGGCAGCAGCAGCACCTACATAA...GGGTCCTGGGGGCGACCGACCTGCTTTACTTGATGGATAAGTTACAGAGTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR GCA 90 bp GGCTTCTGCCACCCAGCGGCAGCCTTTTACAGTGAGAAACATGTATGTAGCAACGGCATGTTATGTAGGTaGTGCTGCTGCCAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: GFCHPAAAFYSEKHVCSNGMLCR*CCCQPV
Trigger: AACTGGCTGGCAGCAGCAGCACCTACATAACATGCC...GTTGCTACATACATGTTTCTCACTGTAAAAGGCTGCCGCTGGGTGGCAGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR GCA 90 bp GAAGTGACATTTGGGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCGGCATGTTATGTAGGTaGTGCTGCTGCCAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: EVTFGGPDTPGCSTVLYCGMLCR*CCCQPV
Trigger: AACTGGCTGGCAGCAGCAGCACCTACATAACATGCC...GCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCCCAAATGTCACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR GCA 90 bp TTTCCTTCCTCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTGGCATGTTATGTAGGTaGTGCTGCTGCCAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: FPSSPAPRLSPCSPPELCGMLCR*CCCQPV
Trigger: AACTGGCTGGCAGCAGCAGCACCTACATAACATGCC...ACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGAGGAAGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR GCA 90 bp ACAGGCGTGTTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACAGGAACTGCTACAGCTaGTCAAGCTGTCAACAGGAG +
Preference number: 4 (lower is better)
Translates to: TGVFLQLPVVTTCRVCPNRNCYS*SSCQQE
Trigger: CTCCTGTTGACAGCTTGAGCAGCTGTAGCAGTTCCT...GTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAACACGCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp ACAGGCGTGTTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACTCCCATCGTAGGAACTaGTACAGCTGCTCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: TGVFLQLPVVTTCRVCPNSHRRN*YSCSSC
Trigger: ACAGCTTGAGCAGCTGTAGCAGTTCCTACGATGGGA...GTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAACACGCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp TTTCCTTCCTCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTCACTGGGATGGTAACTaGCATCTCAAAGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: FPSSPAPRLSPCSPPELCHWDGN*HLKAGR
Trigger: CCTCCCAGCTTTGAGATGCCAGTTACCATCCCAGTG...ACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGAGGAAGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CCA 90 bp GAAGTGACATTTGGGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCCACTGGGATGGTAACTaGCATCTCAAAGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: EVTFGGPDTPGCSTVLYCHWDGN*HLKAGR
Trigger: CCTCCCAGCTTTGAGATGCCAGTTACCATCCCAGTG...GCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCCCAAATGTCACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CCA 90 bp TTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACAAGACGGGTGGGCCAGTaGCAGAAGATTGGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: FLQLPVVTTCRVCPNLYTRRVGQ*QKIGVS
Trigger: GGAAACCCCAATCTTCTGCCACTGGCCCACCCGTCT...TGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp GAGTCCAATGGGGGAGTGGAATTCGTTCCGGTGATCCTCTCGGTCGCTCCCATCAAGAACGCGGAGATCTaGCTTACGATTATTCATTCC +
Preference number: 4 (lower is better)
Translates to: ESNGGVEFVPVILSVAPIKNAEI*LTIIHS
Trigger: GGAATGAATAATCGTAAGCCAGATCTCCGCGTTCTT...GATGGGAGCGACCGAGAGGATCACCGGAACGAATTCCACTCCCCCATTGGACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR CCA 90 bp CGGCGAAGGTCTGGTGAGTCCAATGGGGGAGTGGAATTCGTTCCGGTGATCCTCAAGAACGCGGAGATCTaGCTTACGATTATTCATTCC +
Preference number: 4 (lower is better)
Translates to: RRRSGESNGGVEFVPVILKNAEI*LTIIHS
Trigger: GGAATGAATAATCGTAAGCCAGATCTCCGCGTTCTT...GAGGATCACCGGAACGAATTCCACTCCCCCATTGGACTCACCAGACCTTCGCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR CCA 90 bp ACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGGTTCTTGCTGCCAGGTaGGATAAGAACGCGGAGATC +
Preference number: 4 (lower is better)
Translates to: TPMICLQVCERAWMLGDRVLAAR*DKNAEI
Trigger: GATCTCCGCGTTCTTATCCCACCTGGCAGCAAGAAC...CCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp CTTCCTCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTAACTGTTCTTGCTGCCAGGTaGGATAAGAACGCGGAGATC +
Preference number: 4 (lower is better)
Translates to: LPLQHPGFHLVLLQNSVTVLAAR*DKNAEI
Trigger: GATCTCCGCGTTCTTATCCCACCTGGCAGCAAGAAC...AGTTACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGAGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CCA 90 bp TTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACAGCGCGTGGTGTGTTGTaGGTATCTCGAAGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: FLQLPVVTTCRVCPNLYTARGVL*VSRRGG
Trigger: ACCACCCCTTCGAGATACCCACAACACACCACGCGC...TGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp GGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCTGACAACATTGTTGTCTGCATCGGGATCTaGGCTGTCACAGCCATTGAG +
Preference number: 4 (lower is better)
Translates to: GVLTHQAVQQSYTADNIVVCIGI*AVTAIE
Trigger: CTCAATGGCTGTGACAGCCCAGATCCCGATGCAGAC...AACAATGTTGTCAGCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CCA 90 bp CTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTGTCTGCATCGGGATCTaGGCTGTCACAGCCATTGAG +
Preference number: 4 (lower is better)
Translates to: LQVCERAWMLGDRRVPTIVCIGI*AVTAIE
Trigger: CTCAATGGCTGTGACAGCCCAGATCCCGATGCAGAC...AATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp CAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTACCGTCTGCATCGGGATCTaGGCTGTCACAGCCATTGAG +
Preference number: 4 (lower is better)
Translates to: QVCERAWMLGDRRVPTITVCIGI*AVTAIE
Trigger: CTCAATGGCTGTGACAGCCCAGATCCCGATGCAGAC...GGTAATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp TCAGAGAGTCGCATGCGCTTGACTGAAGGACTTTCCCTTTCGTCCGGCGAAGGTCTCAAAGCTGGGAGGTaGAACAGCACACAATCTTTG +
Preference number: 4 (lower is better)
Translates to: SESRMRLTEGLSLSSGEGLKAGR*NSTQSL
Trigger: CAAAGATTGTGTGCTGTTCCACCTCCCAGCTTTGAG...ACCTTCGCCGGACGAAAGGGAAAGTCCTTCAGTCAAGCGCATGCGACTCTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197722.5
CDS-3UTR CCA 90 bp CAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTACCATCTCGAAGGGGTGGTaGTACGGTCTCCCAACTGAC +
Preference number: 4 (lower is better)
Translates to: QVCERAWMLGDRRVPTITISKGW*YGLPTD
Trigger: GTCAGTTGGGAGACCGTACCACCACCCCTTCGAGAT...GGTAATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199432.5
CDS-3UTR TCA 90 bp CAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTACCGGGGTAGCCAATGACTaGGCCGACTGGGAGTTATTT +
Preference number: 4 (lower is better)
Translates to: QVCERAWMLGDRRVPTITGVAND*ADWELF
Trigger: AAATAACTCCCAGTCGGCTCAGTCATTGGCTACCCC...GGTAATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp TTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGGGGGTAGCCAATGACTaGGCCGACTGGGAGTTATTT +
Preference number: 4 (lower is better)
Translates to: LNECHTPMICLQVCERAWGVAND*ADWELF
Trigger: AAATAACTCCCAGTCGGCTCAGTCATTGGCTACCCC...CCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp ACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTCACCGGGGTAGCCAATaGCTGAGCCGACTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: TITGSHHLPGLSKPLYIFHRGSQ*LSRLGV
Trigger: AACTCCCAGTCGGCTCAGTCATTGGCTACCCCGGTG...AAAAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp CAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTACCGAAGCCAGACAGAGATaGCAGATCTGCGCTACTCAG +
Preference number: 4 (lower is better)
Translates to: QVCERAWMLGDRRVPTITEARQR*QICATQ
Trigger: CTGAGTAGCGCAGATCTGTCATCTCTGTCTGGCTTC...GGTAATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp CTTCCTCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTAACTTTGATGCTGAGGCTTTaGGTAGAAGGCAGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: LPLQHPGFHLVLLQNSVTLMLRL*VEGRER
Trigger: TCTCTCCCTGCCTTCTACTCAAAGCCTCAGCATCAA...AGTTACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR TCA 90 bp ACAGGCGTGTTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACAGGAGAAACAGGTTCTaGCTTGATGCTGAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: TGVFLQLPVVTTCRVCPNRRNRF*LDAEAL
Trigger: CAAAGCCTCAGCATCAAGTCAGAACCTGTTTCTCCT...GTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAACACGCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp GTTAAGAAAAATATAGCCTCGTTAATAAGGTCTTTTGGCTTCTGCCACCCAGCGCCGGCGAAGGTCTGGTaGGTCCAATGGGGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: VKKNIASLIRSFGFCHPAPAKVW*VQWGSG
Trigger: TCCACTCCCCCATTGGACTCACCAGACCTTCGCCGG...CGCTGGGTGGCAGAAGCCAAAAGACCTTATTAACGAGGCTATATTTTTCTTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR TCA 90 bp TTTCCTTCCTCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTAGAGTCGCATGCGCTTaGCTGAAGGACTTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: FPSSPAPRLSPCSPPELCRVACA*LKDFPF
Trigger: AAAGGGAAAGTCCTTCAGTCAAGCGCATGCGACTCT...ACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGAGGAAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR TCA 90 bp TCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTAACTTATCCTGTCTCCACAATGTCTaGGTTTGTCCGGCTCTCGTG +
Preference number: 4 (lower is better)
Translates to: SPAPRLSPCSPPELCNLSCLHNV*VCPALV
Trigger: CACGAGAGCCGGACAAACTCAGACATTGTGGAGACA...GGATAAGTTACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR TCA 90 bp CAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTACCGGCTGTCACAGCCATTaGGGCCCTTCTTTCTCAATG +
Preference number: 4 (lower is better)
Translates to: QVCERAWMLGDRRVPTITGCHSH*GPSFSM
Trigger: CATTGAGAAAGAAGGGCCTCAATGGCTGTGACAGCC...GGTAATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp CTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTGGCTGTCACAGCCATTaGGGCCCTTCTTTCTCAATG +
Preference number: 4 (lower is better)
Translates to: LQVCERAWMLGDRRVPTIGCHSH*GPSFSM
Trigger: CATTGAGAAAGAAGGGCCTCAATGGCTGTGACAGCC...AATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp CCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTAGGGCTGTGACCTACTaGATCGTCTGCATCGGGATC +
Preference number: 4 (lower is better)
Translates to: PTITGSHHLPGLSKPLYIRAVTY*IVCIGI
Trigger: GATCCCGATGCAGACGATTCAGTAGGTCACAGCCCT...AATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp ACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCACATCCTCAGACACTaGTGGCATCGTGTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: TPMICLQVCERAWMLGDRHILRH*WHRVLA
Trigger: AGCAAGAACACGATGCCATCAGTGTCTGAGGATGTG...CCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR TCA 90 bp GAAGTGACATTTGGGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCCACATCCTCAGACACTaGTGGCATCGTGTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: EVTFGGPDTPGCSTVLYCHILRH*WHRVLA
Trigger: AGCAAGAACACGATGCCATCAGTGTCTGAGGATGTG...GCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCCCAAATGTCACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR GCA 90 bp CTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTTGTCCGGCTCTCGTaGGGCTCGTTGTACTCGGTG +
Preference number: 4 (lower is better)
Translates to: LQLPVVTTCRVCPNLYTFFVRLS*GSLYSV
Trigger: CACCGAGTACAACGAGCCGCACGAGAGCCGGACAAA...AAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp CTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTAGTGCGTGGGGTGAGTaGATAAGAGGAGTCAGGATC +
Preference number: 4 (lower is better)
Translates to: LQVCERAWMLGDRRVPTISAWGE*IRGVRI
Trigger: GATCCTGACTCCTCTTATGCACTCACCCCACGCACT...AATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000198199.5
CDS-3UTR GCA 90 bp GGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCTGACAACATTGTTGACATACTATTCCTCTaGAGAGACGGGTGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: GVLTHQAVQQSYTADNIVDILFL*RDGWAS
Trigger: ACTGGCCCACCCGTCTCTGCAGAGGAATAGTATGTC...AACAATGTTGTCAGCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR GCA 90 bp CTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTGACATACTATTCCTCTaGAGAGACGGGTGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: LQVCERAWMLGDRRVPTIDILFL*RDGWAS
Trigger: ACTGGCCCACCCGTCTCTGCAGAGGAATAGTATGTC...AATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp CAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTACCGACATACTATTCCTCTaGAGAGACGGGTGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: QVCERAWMLGDRRVPTITDILFL*RDGWAS
Trigger: ACTGGCCCACCCGTCTCTGCAGAGGAATAGTATGTC...GGTAATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp GATCATGTTGCCCATCCTTCAGAGAGTCGCATGCGCTTGACTGAAGGACTTTCCACCGCCTGTGTTACCTaGACTTGGAGGTCTATGTGT +
Preference number: 4 (lower is better)
Translates to: DHVAHPSESRMRLTEGLSTACVT*TWRSMC
Trigger: ACACATAGACCTCCAAGTGCAGGTAACACAGGCGGT...GGAAAGTCCTTCAGTCAAGCGCATGCGACTCTCTGAAGGATGGGCAACATGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR GCA 90 bp CTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTGTAGGTGCTGCTGCTaGCAGCCAGTTACAGAGCCG +
Preference number: 4 (lower is better)
Translates to: LQLPVVTTCRVCPNLYTFCRCCC*QPVTEP
Trigger: CGGCTCTGTAACTGGCTGGCAGCAGCAGCACCTACA...AAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp CCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTCTATATGTGTAGGTGCTGCTGCTaGCAGCCAGTTACAGAGCCG +
Preference number: 4 (lower is better)
Translates to: PVVTTCRVCPNLYTFFYMCRCCC*QPVTEP
Trigger: CGGCTCTGTAACTGGCTGGCAGCAGCAGCACCTACA...CATATAGAAAAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp ATCCTTTTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTTGTAGGTGCTGCTGCTaGCAGCCAGTTACAGAGCCG +
Preference number: 4 (lower is better)
Translates to: ILLNECHTPMICLQVCERCRCCC*QPVTEP
Trigger: CGGCTCTGTAACTGGCTGGCAGCAGCAGCACCTACA...ACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAAAAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp GATCATGTTGCCCATCCTTCAGAGAGTCGCATGCGCTTGACTGAAGGACTTTCCTTATGTAGGTGCTGCTaGTGCCAGCCAGTTACAGAG +
Preference number: 4 (lower is better)
Translates to: DHVAHPSESRMRLTEGLSLCRCC*CQPVTE
Trigger: CTCTGTAACTGGCTGGCAGCAGCAGCACCTACATAA...GGAAAGTCCTTCAGTCAAGCGCATGCGACTCTCTGAAGGATGGGCAACATGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR GCA 90 bp GAAGTGACATTTGGGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCTTATGTAGGTGCTGCTaGTGCCAGCCAGTTACAGAG +
Preference number: 4 (lower is better)
Translates to: EVTFGGPDTPGCSTVLYCLCRCC*CQPVTE
Trigger: CTCTGTAACTGGCTGGCAGCAGCAGCACCTACATAA...GCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCCCAAATGTCACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR GCA 90 bp CAGAACTCTGTAACTTATCCATCAAGTAAAGCAGGTCGGTCGCCCCCAGGACCCATGTTATGTAGGTGCTaGTGCTGCCAGCCAGTTACA +
Preference number: 4 (lower is better)
Translates to: QNSVTYPSSKAGRSPPGPMLCRC*CCQPVT
Trigger: TGTAACTGGCTGGCAGCAGCAGCACCTACATAACAT...GGGTCCTGGGGGCGACCGACCTGCTTTACTTGATGGATAAGTTACAGAGTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR GCA 90 bp ACAGGCGTGTTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACATGTTATGTAGGTGCTaGTGCTGCCAGCCAGTTACA +
Preference number: 4 (lower is better)
Translates to: TGVFLQLPVVTTCRVCPNMLCRC*CCQPVT
Trigger: TGTAACTGGCTGGCAGCAGCAGCACCTACATAACAT...GTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAACACGCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp GAAGTGACATTTGGGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCAGGAACTGCTACAGCTaGTCAAGCTGTCAACAGGAG +
Preference number: 4 (lower is better)
Translates to: EVTFGGPDTPGCSTVLYCRNCYS*SSCQQE
Trigger: CTCCTGTTGACAGCTTGAGCAGCTGTAGCAGTTCCT...GCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCCCAAATGTCACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR GCA 90 bp GGCTTCTGCCACCCAGCGGCAGCCTTTTACAGTGAGAAACATGTATGTAGCAACAGGAACTGCTACAGCTaGTCAAGCTGTCAACAGGAG +
Preference number: 4 (lower is better)
Translates to: GFCHPAAAFYSEKHVCSNRNCYS*SSCQQE
Trigger: CTCCTGTTGACAGCTTGAGCAGCTGTAGCAGTTCCT...GTTGCTACATACATGTTTCTCACTGTAAAAGGCTGCCGCTGGGTGGCAGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR GCA 90 bp GAAGTGACATTTGGGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCTCCCATCGTAGGAACTaGTACAGCTGCTCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: EVTFGGPDTPGCSTVLYCSHRRN*YSCSSC
Trigger: ACAGCTTGAGCAGCTGTAGCAGTTCCTACGATGGGA...GCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCCCAAATGTCACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR GCA 90 bp CTTTCGTCCGGCGAAGGTCTGGTGAGTCCAATGGGGGAGTGGAATTCGTTCCGGACAGCACACAATCTTTaGCTGCTGATCATTAGATCA +
Preference number: 4 (lower is better)
Translates to: LSSGEGLVSPMGEWNSFRTAHNL*LLIIRS
Trigger: TGATCTAATGATCAGCAGGCAAAGATTGTGTGCTGT...CCGGAACGAATTCCACTCCCCCATTGGACTCACCAGACCTTCGCCGGACGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000197722.5
CDS-3UTR CCA 90 bp TTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGCACTGGGATGGTAACTaGCATCTCAAAGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LNECHTPMICLQVCERAWHWDGN*HLKAGR
Trigger: CCTCCCAGCTTTGAGATGCCAGTTACCATCCCAGTG...CCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp GGCTTCTGCCACCCAGCGGCAGCCTTTTACAGTGAGAAACATGTATGTAGCAACGTTATGGCTGGACACTaGGATGGTAACTGGCATCTC +
Preference number: 4 (lower is better)
Translates to: GFCHPAAAFYSEKHVCSNVMAGH*DGNWHL
Trigger: GAGATGCCAGTTACCATCCCAGTGTCCAGCCATAAC...GTTGCTACATACATGTTTCTCACTGTAAAAGGCTGCCGCTGGGTGGCAGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR CCA 90 bp ATCCTTTTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTAGACGGGTGGGCCAGTaGCAGAAGATTGGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: ILLNECHTPMICLQVCERRRVGQ*QKIGVS
Trigger: GGAAACCCCAATCTTCTGCCACTGGCCCACCCGTCT...ACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAAAAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp CTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTAGACGGGTGGGCCAGTaGCAGAAGATTGGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: LQLPVVTTCRVCPNLYTFRRVGQ*QKIGVS
Trigger: GGAAACCCCAATCTTCTGCCACTGGCCCACCCGTCT...AAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp GGGAGTTATTTATCCTTTGATTCACTGATGGCATCGTGTTCTTGCTGCCAGGTGCTCTGCAGAGACGGGTaGGCCAGTGGCAGAAGATTG +
Preference number: 4 (lower is better)
Translates to: GSYLSFDSLMASCSCCQVLCRDG*ASGRRL
Trigger: CAATCTTCTGCCACTGGCCCACCCGTCTCTGCAGAG...CACCTGGCAGCAAGAACACGATGCCATCAGTGAATCAAAGGATAAATAACTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198360.2
CDS-3UTR CCA 90 bp ACTTTCCCTTTCGTCCGGCGAAGGTCTGGTGAGTCCAATGGGGGAGTGGAATTCTGTGTTACCTGCACTTaGAGGTCTATGTGTTACACC +
Preference number: 4 (lower is better)
Translates to: TFPFVRRRSGESNGGVEFCVTCT*RSMCYT
Trigger: GGTGTAACACATAGACCTCCAAGTGCAGGTAACACA...GAATTCCACTCCCCCATTGGACTCACCAGACCTTCGCCGGACGAAAGGGAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR CCA 90 bp TCAGAGAGTCGCATGCGCTTGACTGAAGGACTTTCCCTTTCGTCCGGCGAAGGTTGTGTTACCTGCACTTaGAGGTCTATGTGTTACACC +
Preference number: 4 (lower is better)
Translates to: SESRMRLTEGLSLSSGEGCVTCT*RSMCYT
Trigger: GGTGTAACACATAGACCTCCAAGTGCAGGTAACACA...ACCTTCGCCGGACGAAAGGGAAAGTCCTTCAGTCAAGCGCATGCGACTCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR CCA 90 bp ATCCTTTTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTATCCATTCCCTGCGCTaGTGCCTGCACCGGATGTCA +
Preference number: 4 (lower is better)
Translates to: ILLNECHTPMICLQVCERIHSLR*CLHRMS
Trigger: TGACATCCGGTGCAGGCACCAGCGCAGGGAATGGAT...ACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAAAAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp CTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTATCCATTCCCTGCGCTaGTGCCTGCACCGGATGTCA +
Preference number: 4 (lower is better)
Translates to: LQLPVVTTCRVCPNLYTFIHSLR*CLHRMS
Trigger: TGACATCCGGTGCAGGCACCAGCGCAGGGAATGGAT...AAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp CGAAGGTCTGGTGAGTCCAATGGGGGAGTGGAATTCGTTCCGGTGATCCTCTCGAAGAACGCGGAGATCTaGCTTACGATTATTCATTCC +
Preference number: 4 (lower is better)
Translates to: RRSGESNGGVEFVPVILSKNAEI*LTIIHS
Trigger: GGAATGAATAATCGTAAGCCAGATCTCCGCGTTCTT...CGAGAGGATCACCGGAACGAATTCCACTCCCCCATTGGACTCACCAGACCTTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR CCA 90 bp CAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTACCGTTCTTGCTGCCAGGTaGGATAAGAACGCGGAGATC +
Preference number: 4 (lower is better)
Translates to: QVCERAWMLGDRRVPTITVLAAR*DKNAEI
Trigger: GATCTCCGCGTTCTTATCCCACCTGGCAGCAAGAAC...GGTAATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp CTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTGTTCTTGCTGCCAGGTaGGATAAGAACGCGGAGATC +
Preference number: 4 (lower is better)
Translates to: LQVCERAWMLGDRRVPTIVLAAR*DKNAEI
Trigger: GATCTCCGCGTTCTTATCCCACCTGGCAGCAAGAAC...AATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp ATCCTTTTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCGCGTGGTGTGTTGTaGGTATCTCGAAGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: ILLNECHTPMICLQVCERARGVL*VSRRGG
Trigger: ACCACCCCTTCGAGATACCCACAACACACCACGCGC...ACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAAAAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp TTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGCTGGCATCTCAAAGCTaGGAGGTGGAACAGCACACA +
Preference number: 4 (lower is better)
Translates to: LNECHTPMICLQVCERAWLASQS*EVEQHT
Trigger: TGTGTGCTGTTCCACCTCCCAGCTTTGAGATGCCAG...CCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp TTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACAATCTCGAAGGGGTGGTaGTACGGTCTCCCAACTGAC +
Preference number: 4 (lower is better)
Translates to: FLQLPVVTTCRVCPNLYTISKGW*YGLPTD
Trigger: GTCAGTTGGGAGACCGTACCACCACCCCTTCGAGAT...TGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199432.5
CDS-3UTR TCA 90 bp CTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTCTTCAGTGCGTGGGGTaGGTGCATAAGAGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: LQLPVVTTCRVCPNLYTFLQCVG*VHKRSQ
Trigger: CTGACTCCTCTTATGCACTCACCCCACGCACTGAAG...AAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000198199.5
CDS-3UTR TCA 90 bp CCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTGGTTTCCCAGTGTGCTaGCAGGATTGCTGTACACCA +
Preference number: 4 (lower is better)
Translates to: PTITGSHHLPGLSKPLYIGFPVC*QDCCTP
Trigger: TGGTGTACAGCAATCCTGTCAGCACACTGGGAAACC...AATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp CCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCTCTGAAGACCAGCAGGCCTGGTaGGTTCCGGGGGTTGCCGTA +
Preference number: 4 (lower is better)
Translates to: PFLSFLLFSFKVGMVLSEDQQAW*VPGVAV
Trigger: TACGGCAACCCCCGGAACTCACCAGGCCTGCTGGTC...TTCAGAGAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp CCTTGGTGGGTTTTTACAGGACTGTTTAAAATATTAGCGAAGCTATTGAGGGAAGACCAGCAGGCCTGGTaGGTTCCGGGGGTTGCCGTA +
Preference number: 4 (lower is better)
Translates to: PWWVFTGLFKILAKLLREDQQAW*VPGVAV
Trigger: TACGGCAACCCCCGGAACTCACCAGGCCTGCTGGTC...TTCCCTCAATAGCTTCGCTAATATTTTAAACAGTCCTGTAAAAACCCACCAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp CCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTGGGGTAGCCAATGACTaGGCCGACTGGGAGTTATTT +
Preference number: 4 (lower is better)
Translates to: PTITGSHHLPGLSKPLYIGVAND*ADWELF
Trigger: AAATAACTCCCAGTCGGCTCAGTCATTGGCTACCCC...AATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp TTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACAGAAGCCAGACAGAGATaGCAGATCTGCGCTACTCAG +
Preference number: 4 (lower is better)
Translates to: FLQLPVVTTCRVCPNLYTEARQR*QICATQ
Trigger: CTGAGTAGCGCAGATCTGTCATCTCTGTCTGGCTTC...TGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp ACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTTGGAATTCGTTCCGGTaGTCCTCTCGGTCGCTCCCA +
Preference number: 4 (lower is better)
Translates to: TITGSHHLPGLSKPLYIFWNSFR*SSRSLP
Trigger: TGGGAGCGACCGAGAGGATCACCGGAACGAATTCCA...AAAAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp GTTATCTTGGTTAGCAAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTTGGAATTCGTTCCGGTaGTCCTCTCGGTCGCTCCCA +
Preference number: 4 (lower is better)
Translates to: VILVSKAWRSSWLRVVLSWNSFR*SSRSLP
Trigger: TGGGAGCGACCGAGAGGATCACCGGAACGAATTCCA...AGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTTGCTAACCAAGATAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp CCCTTTCCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCCCGGCGAAGGTCTGGTaGGTCCAATGGGGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: PFPFLSFLLFSFKVGMVLPAKVW*VQWGSG
Trigger: TCCACTCCCCCATTGGACTCACCAGACCTTCGCCGG...GAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGGAAAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp AAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTATACAAAAAGTCCTTCCGGCGAAGGTCTGGTaGGTCCAATGGGGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: KAWRSSWLRVVLSIQKVLPAKVW*VQWGSG
Trigger: TCCACTCCCCCATTGGACTCACCAGACCTTCGCCGG...AAGGACTTTTTGTATAGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp TTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATCGCATGCGCTTGACTaGAGGACTTTCCCTTTCGTC +
Preference number: 4 (lower is better)
Translates to: FLQLPVVTTCRVCPNLYTSHALD*RTFPFV
Trigger: GACGAAAGGGAAAGTCCTTCAGTCAAGCGCATGCGA...TGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp CCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTCTATATGAGGGCTGTGACCTACTaGATCGTCTGCATCGGGATC +
Preference number: 4 (lower is better)
Translates to: PVVTTCRVCPNLYTFFYMRAVTY*IVCIGI
Trigger: GATCCCGATGCAGACGATTCAGTAGGTCACAGCCCT...CATATAGAAAAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp CCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTCAGACTCAGGGCTGTaGCCTACTGAATCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PTITGSHHLPGLSKPLYISDSGL*PTESSA
Trigger: TGCAGACGATTCAGTAGGTCACAGCCCTGAGTCTGA...AATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp CCCTTTCCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCGTACGGTCTCCCAACTaGCTGAGGGCAGATGGCGGC +
Preference number: 4 (lower is better)
Translates to: PFPFLSFLLFSFKVGMVLVRSPN*LRADGG
Trigger: GCCGCCATCTGCCCTCAGTCAGTTGGGAGACCGTAC...GAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGGAAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199432.5
CDS-3UTR GCA 90 bp AGCTTGCAGGACTTAGGCTCCAACACAGCTTCTTACTCTGGGCATATTTCTAAATTTGTCCGGCTCTCGTaGGGCTCGTTGTACTCGGTG +
Preference number: 4 (lower is better)
Translates to: SLQDLGSNTASYSGHISKFVRLS*GSLYSV
Trigger: CACCGAGTACAACGAGCCGCACGAGAGCCGGACAAA...TTTAGAAATATGCCCAGAGTAAGAAGCTGTGTTGGAGCCTAAGTCCTGCAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR GCA 90 bp TTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGACCGCCTGTGTTACCTaGACTTGGAGGTCTATGTGT +
Preference number: 4 (lower is better)
Translates to: LNECHTPMICLQVCERAWTACVT*TWRSMC
Trigger: ACACATAGACCTCCAAGTGCAGGTAACACAGGCGGT...CCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp TCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTAACTTATCCACCGCCTGTGTTACCTaGACTTGGAGGTCTATGTGT +
Preference number: 4 (lower is better)
Translates to: SPAPRLSPCSPPELCNLSTACVT*TWRSMC
Trigger: ACACATAGACCTCCAAGTGCAGGTAACACAGGCGGT...GGATAAGTTACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR GCA 90 bp CTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTACCGCCTGTGTTACCTaGACTTGGAGGTCTATGTGT +
Preference number: 4 (lower is better)
Translates to: LQVCERAWMLGDRRVPTITACVT*TWRSMC
Trigger: ACACATAGACCTCCAAGTGCAGGTAACACAGGCGGT...AATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp TCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTAACTTATCCTTATGTAGGTGCTGCTaGTGCCAGCCAGTTACAGAG +
Preference number: 4 (lower is better)
Translates to: SPAPRLSPCSPPELCNLSLCRCC*CQPVTE
Trigger: CTCTGTAACTGGCTGGCAGCAGCAGCACCTACATAA...GGATAAGTTACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR GCA 90 bp CTTCCTCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTAACTATGTTATGTAGGTGCTaGTGCTGCCAGCCAGTTACA +
Preference number: 4 (lower is better)
Translates to: LPLQHPGFHLVLLQNSVTMLCRC*CCQPVT
Trigger: TGTAACTGGCTGGCAGCAGCAGCACCTACATAACAT...AGTTACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR GCA 90 bp ACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGATGTTATGTAGGTGCTaGTGCTGCCAGCCAGTTACA +
Preference number: 4 (lower is better)
Translates to: TPMICLQVCERAWMLGDRMLCRC*CCQPVT
Trigger: TGTAACTGGCTGGCAGCAGCAGCACCTACATAACAT...CCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp TTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACAGGCATGTTATGTAGGTaGTGCTGCTGCCAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: FLQLPVVTTCRVCPNLYTGMLCR*CCCQPV
Trigger: AACTGGCTGGCAGCAGCAGCACCTACATAACATGCC...TGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp CTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTTCCCATCGTAGGAACTaGTACAGCTGCTCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: LQVCERAWMLGDRRVPTISHRRN*YSCSSC
Trigger: ACAGCTTGAGCAGCTGTAGCAGTTCCTACGATGGGA...AATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp CCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTCACTGGGATGGTAACTaGCATCTCAAAGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: PTITGSHHLPGLSKPLYIHWDGN*HLKAGR
Trigger: CCTCCCAGCTTTGAGATGCCAGTTACCATCCCAGTG...AATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp CTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTGTTATGGCTGGACACTaGGATGGTAACTGGCATCTC +
Preference number: 4 (lower is better)
Translates to: LQVCERAWMLGDRRVPTIVMAGH*DGNWHL
Trigger: GAGATGCCAGTTACCATCCCAGTGTCCAGCCATAAC...AATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp GGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCTGACAACATTGTTGTTATGGCTGGACACTaGGATGGTAACTGGCATCTC +
Preference number: 4 (lower is better)
Translates to: GVLTHQAVQQSYTADNIVVMAGH*DGNWHL
Trigger: GAGATGCCAGTTACCATCCCAGTGTCCAGCCATAAC...AACAATGTTGTCAGCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CCA 90 bp AGCTTGCAGGACTTAGGCTCCAACACAGCTTCTTACTCTGGGCATATTTCTAAACTCTGCAGAGACGGGTaGGCCAGTGGCAGAAGATTG +
Preference number: 4 (lower is better)
Translates to: SLQDLGSNTASYSGHISKLCRDG*ASGRRL
Trigger: CAATCTTCTGCCACTGGCCCACCCGTCTCTGCAGAG...TTTAGAAATATGCCCAGAGTAAGAAGCTGTGTTGGAGCCTAAGTCCTGCAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CCA 90 bp ACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTCTCTGCAGAGACGGGTaGGCCAGTGGCAGAAGATTG +
Preference number: 4 (lower is better)
Translates to: TITGSHHLPGLSKPLYIFLCRDG*ASGRRL
Trigger: CAATCTTCTGCCACTGGCCCACCCGTCTCTGCAGAG...AAAAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp CAGAACTCTGTAACTTATCCATCAAGTAAAGCAGGTCGGTCGCCCCCAGGACCCTGTGTTACCTGCACTTaGAGGTCTATGTGTTACACC +
Preference number: 4 (lower is better)
Translates to: QNSVTYPSSKAGRSPPGPCVTCT*RSMCYT
Trigger: GGTGTAACACATAGACCTCCAAGTGCAGGTAACACA...GGGTCCTGGGGGCGACCGACCTGCTTTACTTGATGGATAAGTTACAGAGTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CCA 90 bp ACAGGCGTGTTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACTGTGTTACCTGCACTTaGAGGTCTATGTGTTACACC +
Preference number: 4 (lower is better)
Translates to: TGVFLQLPVVTTCRVCPNCVTCT*RSMCYT
Trigger: GGTGTAACACATAGACCTCCAAGTGCAGGTAACACA...GTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAACACGCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp CCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTGTTCTTGCTGCCAGGTaGGATAAGAACGCGGAGATC +
Preference number: 4 (lower is better)
Translates to: PTITGSHHLPGLSKPLYIVLAAR*DKNAEI
Trigger: GATCTCCGCGTTCTTATCCCACCTGGCAGCAAGAAC...AATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp TTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACAGTTCTTGCTGCCAGGTaGGATAAGAACGCGGAGATC +
Preference number: 4 (lower is better)
Translates to: FLQLPVVTTCRVCPNLYTVLAAR*DKNAEI
Trigger: GATCTCCGCGTTCTTATCCCACCTGGCAGCAAGAAC...TGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp ACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTGCGCGTGGTGTGTTGTaGGTATCTCGAAGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: TITGSHHLPGLSKPLYIFARGVL*VSRRGG
Trigger: ACCACCCCTTCGAGATACCCACAACACACCACGCGC...AAAAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp CCCTTTCCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCCCGCCTCGTGGCGCGTaGTGTGTTGTGGGTATCTCG +
Preference number: 4 (lower is better)
Translates to: PFPFLSFLLFSFKVGMVLPPRGA*CVVGIS
Trigger: CGAGATACCCACAACACACCACGCGCCACGAGGCGG...GAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGGAAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp CAAGGCAGGCTAGCATCCTATATGGATACCACCAAAGGTGCATTGTGGTCTAATGTCTGCATCGGGATCTaGGCTGTCACAGCCATTGAG +
Preference number: 4 (lower is better)
Translates to: QGRLASYMDTTKGALWSNVCIGI*AVTAIE
Trigger: CTCAATGGCTGTGACAGCCCAGATCCCGATGCAGAC...ATTAGACCACAATGCACCTTTGGTGGTATCCATATAGGATGCTAGCCTGCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR CCA 90 bp TTTCCTTCCTCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTCTCAAAGCTGGGAGGTaGAACAGCACACAATCTTTG +
Preference number: 4 (lower is better)
Translates to: FPSSPAPRLSPCSPPELCLKAGR*NSTQSL
Trigger: CAAAGATTGTGTGCTGTTCCACCTCCCAGCTTTGAG...ACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGAGGAAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CCA 90 bp ACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCTCAAAGCTGGGAGGTaGAACAGCACACAATCTTTG +
Preference number: 4 (lower is better)
Translates to: TPMICLQVCERAWMLGDRLKAGR*NSTQSL
Trigger: CAAAGATTGTGTGCTGTTCCACCTCCCAGCTTTGAG...CCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp TTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACACTGGCATCTCAAAGCTaGGAGGTGGAACAGCACACA +
Preference number: 4 (lower is better)
Translates to: FLQLPVVTTCRVCPNLYTLASQS*EVEQHT
Trigger: TGTGTGCTGTTCCACCTCCCAGCTTTGAGATGCCAG...TGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp CCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTCTATATGGGTATCTCGAAGGGGTaGTGGTACGGTCTCCCAACT +
Preference number: 4 (lower is better)
Translates to: PVVTTCRVCPNLYTFFYMGISKG*WYGLPT
Trigger: AGTTGGGAGACCGTACCACCACCCCTTCGAGATACC...CATATAGAAAAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199432.5
CDS-3UTR TCA 90 bp ACAGGCGTGTTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACTATCCTTTGATTCACTaGTGGCATCGTGTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: TGVFLQLPVVTTCRVCPNYPLIH*WHRVLA
Trigger: AGCAAGAACACGATGCCATCAGTGAATCAAAGGATA...GTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAACACGCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000198199.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp CCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTCTATATGGGGGTAGCCAATGACTaGGCCGACTGGGAGTTATTT +
Preference number: 4 (lower is better)
Translates to: PVVTTCRVCPNLYTFFYMGVAND*ADWELF
Trigger: AAATAACTCCCAGTCGGCTCAGTCATTGGCTACCCC...CATATAGAAAAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp ATCCTTTTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGGGGTAGCCAATGACTaGGCCGACTGGGAGTTATTT +
Preference number: 4 (lower is better)
Translates to: ILLNECHTPMICLQVCERGVAND*ADWELF
Trigger: AAATAACTCCCAGTCGGCTCAGTCATTGGCTACCCC...ACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAAAAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp AAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTATACAAAAAGTCCTTCACCGGGGTAGCCAATaGCTGAGCCGACTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: KAWRSSWLRVVLSIQKVLHRGSQ*LSRLGV
Trigger: AACTCCCAGTCGGCTCAGTCATTGGCTACCCCGGTG...AAGGACTTTTTGTATAGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp TATATGGATACCACCAAAGGTGCATTGTGGTCTAATTCTGGATTGCAGATCAAGCACCGGGGTAGCCAATaGCTGAGCCGACTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: YMDTTKGALWSNSGLQIKHRGSQ*LSRLGV
Trigger: AACTCCCAGTCGGCTCAGTCATTGGCTACCCCGGTG...CTTGATCTGCAATCCAGAATTAGACCACAATGCACCTTTGGTGGTATCCATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR TCA 90 bp CCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTCTATATGGAAGCCAGACAGAGATaGCAGATCTGCGCTACTCAG +
Preference number: 4 (lower is better)
Translates to: PVVTTCRVCPNLYTFFYMEARQR*QICATQ
Trigger: CTGAGTAGCGCAGATCTGTCATCTCTGTCTGGCTTC...CATATAGAAAAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp CAAGGCAGGCTAGCATCCTATATGGATACCACCAAAGGTGCATTGTGGTCTAATGAAGCCAGACAGAGATaGCAGATCTGCGCTACTCAG +
Preference number: 4 (lower is better)
Translates to: QGRLASYMDTTKGALWSNEARQR*QICATQ
Trigger: CTGAGTAGCGCAGATCTGTCATCTCTGTCTGGCTTC...ATTAGACCACAATGCACCTTTGGTGGTATCCATATAGGATGCTAGCCTGCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR TCA 90 bp GTTAAGAAAAATATAGCCTCGTTAATAAGGTCTTTTGGCTTCTGCCACCCAGCGAAGCTCCCAACTGACTaGGGGCAGATGGCGGCATGT +
Preference number: 4 (lower is better)
Translates to: VKKNIASLIRSFGFCHPAKLPTD*GQMAAC
Trigger: ACATGCCGCCATCTGCCCTCAGTCAGTTGGGAGCTT...CGCTGGGTGGCAGAAGCCAAAAGACCTTATTAACGAGGCTATATTTTTCTTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR TCA 90 bp TCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTAACTTATCCAGGAGAAACAGGTTCTaGCTTGATGCTGAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: SPAPRLSPCSPPELCNLSRRNRF*LDAEAL
Trigger: CAAAGCCTCAGCATCAAGTCAGAACCTGTTTCTCCT...GGATAAGTTACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR TCA 90 bp CCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCTCTGAACCGGCGAAGGTCTGGTaGGTCCAATGGGGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: PFLSFLLFSFKVGMVLSEPAKVW*VQWGSG
Trigger: TCCACTCCCCCATTGGACTCACCAGACCTTCGCCGG...TTCAGAGAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp ATCCCCCAGAGCTCTGCCCTAGACTTCTCAATACAAAGAACTTGGTGTGATCAATCGCATGCGCTTGACTaGAGGACTTTCCCTTTCGTC +
Preference number: 4 (lower is better)
Translates to: IPQSSALDFSIQRTWCDQSHALD*RTFPFV
Trigger: GACGAAAGGGAAAGTCCTTCAGTCAAGCGCATGCGA...TTGATCACACCAAGTTCTTTGTATTGAGAAGTCTAGGGCAGAGCTCTGGGGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
CDS-3UTR TCA 90 bp CTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTCGCATGCGCTTGACTaGAGGACTTTCCCTTTCGTC +
Preference number: 4 (lower is better)
Translates to: LQLPVVTTCRVCPNLYTFSHALD*RTFPFV
Trigger: GACGAAAGGGAAAGTCCTTCAGTCAAGCGCATGCGA...AAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp ATCCTTTTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTTGTCTCCACAATGTCTaGGTTTGTCCGGCTCTCGTG +
Preference number: 4 (lower is better)
Translates to: ILLNECHTPMICLQVCERCLHNV*VCPALV
Trigger: CACGAGAGCCGGACAAACTCAGACATTGTGGAGACA...ACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAAAAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp CTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTCAGACTCAGGGCTGTaGCCTACTGAATCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: LQLPVVTTCRVCPNLYTFSDSGL*PTESSA
Trigger: TGCAGACGATTCAGTAGGTCACAGCCCTGAGTCTGA...AAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp CTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTAGTGCGTGGGGTGAGTaGATAAGAGGAGTCAGGATC +
Preference number: 4 (lower is better)
Translates to: LQLPVVTTCRVCPNLYTFSAWGE*IRGVRI
Trigger: GATCCTGACTCCTCTTATGCACTCACCCCACGCACT...AAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000198199.5
CDS-3UTR GCA 90 bp TTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTATGTAGGTGCTGCTaGTGCCAGCCAGTTACAGAG +
Preference number: 4 (lower is better)
Translates to: FLQLPVVTTCRVCPNLYTLCRCC*CQPVTE
Trigger: CTCTGTAACTGGCTGGCAGCAGCAGCACCTACATAA...TGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp TCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTAACTTATCCATGTTATGTAGGTGCTaGTGCTGCCAGCCAGTTACA +
Preference number: 4 (lower is better)
Translates to: SPAPRLSPCSPPELCNLSMLCRC*CCQPVT
Trigger: TGTAACTGGCTGGCAGCAGCAGCACCTACATAACAT...GGATAAGTTACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR GCA 90 bp GGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCTGACAACATTGTTATGTTATGTAGGTGCTaGTGCTGCCAGCCAGTTACA +
Preference number: 4 (lower is better)
Translates to: GVLTHQAVQQSYTADNIVMLCRC*CCQPVT
Trigger: TGTAACTGGCTGGCAGCAGCAGCACCTACATAACAT...AACAATGTTGTCAGCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR GCA 90 bp CAAGGCAGGCTAGCATCCTATATGGATACCACCAAAGGTGCATTGTGGTCTAATGGCATGTTATGTAGGTaGTGCTGCTGCCAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: QGRLASYMDTTKGALWSNGMLCR*CCCQPV
Trigger: AACTGGCTGGCAGCAGCAGCACCTACATAACATGCC...ATTAGACCACAATGCACCTTTGGTGGTATCCATATAGGATGCTAGCCTGCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR GCA 90 bp CCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTCTATATGGGCATGTTATGTAGGTaGTGCTGCTGCCAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: PVVTTCRVCPNLYTFFYMGMLCR*CCCQPV
Trigger: AACTGGCTGGCAGCAGCAGCACCTACATAACATGCC...CATATAGAAAAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp AGAACGCGGAGATCTGGCTTACGATTATTCATTCCTAGATTCATAGGGGGAGGACACTGGGATGGTAACTaGCATCTCAAAGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: RTRRSGLRLFIPRFIGGGHWDGN*HLKAGR
Trigger: CCTCCCAGCTTTGAGATGCCAGTTACCATCCCAGTG...TCCTCCCCCTATGAATCTAGGAATGAATAATCGTAAGCCAGATCTCCGCGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000198360.2
CDS-3UTR CCA 90 bp TTTCCTTCCTCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTTACACCAAACTGTTATaGCTGGACACTGGGATGGTA +
Preference number: 4 (lower is better)
Translates to: FPSSPAPRLSPCSPPELCYTKLL*LDTGMV
Trigger: TACCATCCCAGTGTCCAGCCATAACAGTTTGGTGTA...ACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGAGGAAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CCA 90 bp GGCTTCTGCCACCCAGCGGCAGCCTTTTACAGTGAGAAACATGTATGTAGCAACTACACCAAACTGTTATaGCTGGACACTGGGATGGTA +
Preference number: 4 (lower is better)
Translates to: GFCHPAAAFYSEKHVCSNYTKLL*LDTGMV
Trigger: TACCATCCCAGTGTCCAGCCATAACAGTTTGGTGTA...GTTGCTACATACATGTTTCTCACTGTAAAAGGCTGCCGCTGGGTGGCAGAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR CCA 90 bp GATCATGTTGCCCATCCTTCAGAGAGTCGCATGCGCTTGACTGAAGGACTTTCCTACACCAAACTGTTATaGCTGGACACTGGGATGGTA +
Preference number: 4 (lower is better)
Translates to: DHVAHPSESRMRLTEGLSYTKLL*LDTGMV
Trigger: TACCATCCCAGTGTCCAGCCATAACAGTTTGGTGTA...GGAAAGTCCTTCAGTCAAGCGCATGCGACTCTCTGAAGGATGGGCAACATGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR CCA 90 bp ACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGTGTGTTACCTGCACTTaGAGGTCTATGTGTTACACC +
Preference number: 4 (lower is better)
Translates to: TPMICLQVCERAWMLGDRCVTCT*RSMCYT
Trigger: GGTGTAACACATAGACCTCCAAGTGCAGGTAACACA...CCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp GTTAAGAAAAATATAGCCTCGTTAATAAGGTCTTTTGGCTTCTGCCACCCAGCGATCCATTCCCTGCGCTaGTGCCTGCACCGGATGTCA +
Preference number: 4 (lower is better)
Translates to: VKKNIASLIRSFGFCHPAIHSLR*CLHRMS
Trigger: TGACATCCGGTGCAGGCACCAGCGCAGGGAATGGAT...CGCTGGGTGGCAGAAGCCAAAAGACCTTATTAACGAGGCTATATTTTTCTTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR CCA 90 bp CCTTGGTGGGTTTTTACAGGACTGTTTAAAATATTAGCGAAGCTATTGAGGGAACCGCCTCGTGGCGCGTaGTGTGTTGTGGGTATCTCG +
Preference number: 4 (lower is better)
Translates to: PWWVFTGLFKILAKLLREPPRGA*CVVGIS
Trigger: CGAGATACCCACAACACACCACGCGCCACGAGGCGG...TTCCCTCAATAGCTTCGCTAATATTTTAAACAGTCCTGTAAAAACCCACCAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp CTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTCTCAAAGCTGGGAGGTaGAACAGCACACAATCTTTG +
Preference number: 4 (lower is better)
Translates to: LQVCERAWMLGDRRVPTILKAGR*NSTQSL
Trigger: CAAAGATTGTGTGCTGTTCCACCTCCCAGCTTTGAG...AATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp GGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCTGACAACATTGTTCTCAAAGCTGGGAGGTaGAACAGCACACAATCTTTG +
Preference number: 4 (lower is better)
Translates to: GVLTHQAVQQSYTADNIVLKAGR*NSTQSL
Trigger: CAAAGATTGTGTGCTGTTCCACCTCCCAGCTTTGAG...AACAATGTTGTCAGCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CCA 90 bp CTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTCTGGCATCTCAAAGCTaGGAGGTGGAACAGCACACA +
Preference number: 4 (lower is better)
Translates to: LQLPVVTTCRVCPNLYTFLASQS*EVEQHT
Trigger: TGTGTGCTGTTCCACCTCCCAGCTTTGAGATGCCAG...AAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp GTTATCTTGGTTAGCAAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTGGTTTCCCAGTGTGCTaGCAGGATTGCTGTACACCA +
Preference number: 4 (lower is better)
Translates to: VILVSKAWRSSWLRVVLSGFPVC*QDCCTP
Trigger: TGGTGTACAGCAATCCTGTCAGCACACTGGGAAACC...AGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTTGCTAACCAAGATAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp AGCTTGCAGGACTTAGGCTCCAACACAGCTTCTTACTCTGGGCATATTTCTAAAGGGGTAGCCAATGACTaGGCCGACTGGGAGTTATTT +
Preference number: 4 (lower is better)
Translates to: SLQDLGSNTASYSGHISKGVAND*ADWELF
Trigger: AAATAACTCCCAGTCGGCTCAGTCATTGGCTACCCC...TTTAGAAATATGCCCAGAGTAAGAAGCTGTGTTGGAGCCTAAGTCCTGCAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR TCA 90 bp AGCTTGCAGGACTTAGGCTCCAACACAGCTTCTTACTCTGGGCATATTTCTAAAGAAGCCAGACAGAGATaGCAGATCTGCGCTACTCAG +
Preference number: 4 (lower is better)
Translates to: SLQDLGSNTASYSGHISKEARQR*QICATQ
Trigger: CTGAGTAGCGCAGATCTGTCATCTCTGTCTGGCTTC...TTTAGAAATATGCCCAGAGTAAGAAGCTGTGTTGGAGCCTAAGTCCTGCAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR TCA 90 bp ACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTGAAGCCAGACAGAGATaGCAGATCTGCGCTACTCAG +
Preference number: 4 (lower is better)
Translates to: TITGSHHLPGLSKPLYIFEARQR*QICATQ
Trigger: CTGAGTAGCGCAGATCTGTCATCTCTGTCTGGCTTC...AAAAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp GTTATCTTGGTTAGCAAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTGAAGCCAGACAGAGATaGCAGATCTGCGCTACTCAG +
Preference number: 4 (lower is better)
Translates to: VILVSKAWRSSWLRVVLSEARQR*QICATQ
Trigger: CTGAGTAGCGCAGATCTGTCATCTCTGTCTGGCTTC...AGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTTGCTAACCAAGATAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp TATATGGATACCACCAAAGGTGCATTGTGGTCTAATTCTGGATTGCAGATCAAGAAGCTCCCAACTGACTaGGGGCAGATGGCGGCATGT +
Preference number: 4 (lower is better)
Translates to: YMDTTKGALWSNSGLQIKKLPTD*GQMAAC
Trigger: ACATGCCGCCATCTGCCCTCAGTCAGTTGGGAGCTT...CTTGATCTGCAATCCAGAATTAGACCACAATGCACCTTTGGTGGTATCCATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR TCA 90 bp ATCCTTTTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTTTGATGCTGAGGCTTTaGGTAGAAGGCAGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: ILLNECHTPMICLQVCERLMLRL*VEGRER
Trigger: TCTCTCCCTGCCTTCTACTCAAAGCCTCAGCATCAA...ACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAAAAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp AGCTTGCAGGACTTAGGCTCCAACACAGCTTCTTACTCTGGGCATATTTCTAAATCGCATGCGCTTGACTaGAGGACTTTCCCTTTCGTC +
Preference number: 4 (lower is better)
Translates to: SLQDLGSNTASYSGHISKSHALD*RTFPFV
Trigger: GACGAAAGGGAAAGTCCTTCAGTCAAGCGCATGCGA...TTTAGAAATATGCCCAGAGTAAGAAGCTGTGTTGGAGCCTAAGTCCTGCAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR TCA 90 bp ACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTTCGCATGCGCTTGACTaGAGGACTTTCCCTTTCGTC +
Preference number: 4 (lower is better)
Translates to: TITGSHHLPGLSKPLYIFSHALD*RTFPFV
Trigger: GACGAAAGGGAAAGTCCTTCAGTCAAGCGCATGCGA...AAAAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp CTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTAGAGTCGCATGCGCTTaGCTGAAGGACTTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: LQLPVVTTCRVCPNLYTFRVACA*LKDFPF
Trigger: AAAGGGAAAGTCCTTCAGTCAAGCGCATGCGACTCT...AAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp ATCCTTTTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTAGAGTCGCATGCGCTTaGCTGAAGGACTTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: ILLNECHTPMICLQVCERRVACA*LKDFPF
Trigger: AAAGGGAAAGTCCTTCAGTCAAGCGCATGCGACTCT...ACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAAAAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp ACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTGGCTGTCACAGCCATTaGGGCCCTTCTTTCTCAATG +
Preference number: 4 (lower is better)
Translates to: TITGSHHLPGLSKPLYIFGCHSH*GPSFSM
Trigger: CATTGAGAAAGAAGGGCCTCAATGGCTGTGACAGCC...AAAAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp ACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTTCAGACTCAGGGCTGTaGCCTACTGAATCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: TITGSHHLPGLSKPLYIFSDSGL*PTESSA
Trigger: TGCAGACGATTCAGTAGGTCACAGCCCTGAGTCTGA...AAAAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp ATCCTTTTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTCACATCCTCAGACACTaGTGGCATCGTGTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: ILLNECHTPMICLQVCERHILRH*WHRVLA
Trigger: AGCAAGAACACGATGCCATCAGTGTCTGAGGATGTG...ACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAAAAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR GCA 90 bp TTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGGTTGAAGATGATCAGTaGAATCTCACAGTCGCACAG +
Preference number: 4 (lower is better)
Translates to: LNECHTPMICLQVCERAWVEDDQ*NLTVAQ
Trigger: CTGTGCGACTGTGAGATTGCACTGATCATCTTCAAC...CCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp TCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTAACTTATCCGTTGAAGATGATCAGTaGAATCTCACAGTCGCACAG +
Preference number: 4 (lower is better)
Translates to: SPAPRLSPCSPPELCNLSVEDDQ*NLTVAQ
Trigger: CTGTGCGACTGTGAGATTGCACTGATCATCTTCAAC...GGATAAGTTACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR GCA 90 bp TATATGGATACCACCAAAGGTGCATTGTGGTCTAATTCTGGATTGCAGATCAAGTTTGTCCGGCTCTCGTaGGGCTCGTTGTACTCGGTG +
Preference number: 4 (lower is better)
Translates to: YMDTTKGALWSNSGLQIKFVRLS*GSLYSV
Trigger: CACCGAGTACAACGAGCCGCACGAGAGCCGGACAAA...CTTGATCTGCAATCCAGAATTAGACCACAATGCACCTTTGGTGGTATCCATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR GCA 90 bp GTTATCTTGGTTAGCAAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTGACATACTATTCCTCTaGAGAGACGGGTGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: VILVSKAWRSSWLRVVLSDILFL*RDGWAS
Trigger: ACTGGCCCACCCGTCTCTGCAGAGGAATAGTATGTC...AGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTTGCTAACCAAGATAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp ACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTGACATACTATTCCTCTaGAGAGACGGGTGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: TITGSHHLPGLSKPLYIFDILFL*RDGWAS
Trigger: ACTGGCCCACCCGTCTCTGCAGAGGAATAGTATGTC...AAAAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp ATCCTTTTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTACCGCCTGTGTTACCTaGACTTGGAGGTCTATGTGT +
Preference number: 4 (lower is better)
Translates to: ILLNECHTPMICLQVCERTACVT*TWRSMC
Trigger: ACACATAGACCTCCAAGTGCAGGTAACACAGGCGGT...ACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAAAAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp ATCCCCCAGAGCTCTGCCCTAGACTTCTCAATACAAAGAACTTGGTGTGATCAATTATGTAGGTGCTGCTaGTGCCAGCCAGTTACAGAG +
Preference number: 4 (lower is better)
Translates to: IPQSSALDFSIQRTWCDQLCRCC*CQPVTE
Trigger: CTCTGTAACTGGCTGGCAGCAGCAGCACCTACATAA...TTGATCACACCAAGTTCTTTGTATTGAGAAGTCTAGGGCAGAGCTCTGGGGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
CDS-3UTR GCA 90 bp ATCCTTTTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTTTATGTAGGTGCTGCTaGTGCCAGCCAGTTACAGAG +
Preference number: 4 (lower is better)
Translates to: ILLNECHTPMICLQVCERLCRCC*CQPVTE
Trigger: CTCTGTAACTGGCTGGCAGCAGCAGCACCTACATAA...ACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAAAAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp CCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTATGTTATGTAGGTGCTaGTGCTGCCAGCCAGTTACA +
Preference number: 4 (lower is better)
Translates to: PTITGSHHLPGLSKPLYIMLCRC*CCQPVT
Trigger: TGTAACTGGCTGGCAGCAGCAGCACCTACATAACAT...AATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp ATCCCCCAGAGCTCTGCCCTAGACTTCTCAATACAAAGAACTTGGTGTGATCAAAGGAACTGCTACAGCTaGTCAAGCTGTCAACAGGAG +
Preference number: 4 (lower is better)
Translates to: IPQSSALDFSIQRTWCDQRNCYS*SSCQQE
Trigger: CTCCTGTTGACAGCTTGAGCAGCTGTAGCAGTTCCT...TTGATCACACCAAGTTCTTTGTATTGAGAAGTCTAGGGCAGAGCTCTGGGGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
CDS-3UTR GCA 90 bp CAAGGCAGGCTAGCATCCTATATGGATACCACCAAAGGTGCATTGTGGTCTAATAGGAACTGCTACAGCTaGTCAAGCTGTCAACAGGAG +
Preference number: 4 (lower is better)
Translates to: QGRLASYMDTTKGALWSNRNCYS*SSCQQE
Trigger: CTCCTGTTGACAGCTTGAGCAGCTGTAGCAGTTCCT...ATTAGACCACAATGCACCTTTGGTGGTATCCATATAGGATGCTAGCCTGCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR GCA 90 bp ATCCCCCAGAGCTCTGCCCTAGACTTCTCAATACAAAGAACTTGGTGTGATCAATCCCATCGTAGGAACTaGTACAGCTGCTCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: IPQSSALDFSIQRTWCDQSHRRN*YSCSSC
Trigger: ACAGCTTGAGCAGCTGTAGCAGTTCCTACGATGGGA...TTGATCACACCAAGTTCTTTGTATTGAGAAGTCTAGGGCAGAGCTCTGGGGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
CDS-3UTR GCA 90 bp ATCCTTTTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTTCCCATCGTAGGAACTaGTACAGCTGCTCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: ILLNECHTPMICLQVCERSHRRN*YSCSSC
Trigger: ACAGCTTGAGCAGCTGTAGCAGTTCCTACGATGGGA...ACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAAAAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp CAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTACCTTTTTCTTCAGTGCGTaGGGTGAGTGCATAAGAGGA +
Preference number: 4 (lower is better)
Translates to: QVCERAWMLGDRRVPTITFFFSA*GECIRG
Trigger: TCCTCTTATGCACTCACCCCACGCACTGAAGAAAAA...GGTAATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000198199.5
CDS-3UTR CCA 90 bp ACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTCACTGGGATGGTAACTaGCATCTCAAAGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: TITGSHHLPGLSKPLYIFHWDGN*HLKAGR
Trigger: CCTCCCAGCTTTGAGATGCCAGTTACCATCCCAGTG...AAAAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp CCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTCTATATGGTTATGGCTGGACACTaGGATGGTAACTGGCATCTC +
Preference number: 4 (lower is better)
Translates to: PVVTTCRVCPNLYTFFYMVMAGH*DGNWHL
Trigger: GAGATGCCAGTTACCATCCCAGTGTCCAGCCATAAC...CATATAGAAAAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp CAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTACCTACACCAAACTGTTATaGCTGGACACTGGGATGGTA +
Preference number: 4 (lower is better)
Translates to: QVCERAWMLGDRRVPTITYTKLL*LDTGMV
Trigger: TACCATCCCAGTGTCCAGCCATAACAGTTTGGTGTA...GGTAATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp CCCTTTCCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCAGACGGGTGGGCCAGTaGCAGAAGATTGGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: PFPFLSFLLFSFKVGMVLRRVGQ*QKIGVS
Trigger: GGAAACCCCAATCTTCTGCCACTGGCCCACCCGTCT...GAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGGAAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp GGCTTACGATTATTCATTCCTAGATTCATAGGGGGAGGAGATTTGGCTTGTATAAGACGGGTGGGCCAGTaGCAGAAGATTGGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: GLRLFIPRFIGGGDLACIRRVGQ*QKIGVS
Trigger: GGAAACCCCAATCTTCTGCCACTGGCCCACCCGTCT...TATACAAGCCAAATCTCCTCCCCCTATGAATCTAGGAATGAATAATCGTAAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000198360.2
CDS-3UTR CCA 90 bp GCACGTCCTACACGTGACCTGGCAGGGCTAATGTTACTGCATTCTTTGTTCTGTTGTGTTACCTGCACTTaGAGGTCTATGTGTTACACC +
Preference number: 4 (lower is better)
Translates to: ARPTRDLAGLMLLHSLFCCVTCT*RSMCYT
Trigger: GGTGTAACACATAGACCTCCAAGTGCAGGTAACACA...ACAGAACAAAGAATGCAGTAACATTAGCCCTGCCAGGTCACGTGTAGGACGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR CCA 90 bp TATATGGATACCACCAAAGGTGCATTGTGGTCTAATTCTGGATTGCAGATCAAGATCCATTCCCTGCGCTaGTGCCTGCACCGGATGTCA +
Preference number: 4 (lower is better)
Translates to: YMDTTKGALWSNSGLQIKIHSLR*CLHRMS
Trigger: TGACATCCGGTGCAGGCACCAGCGCAGGGAATGGAT...CTTGATCTGCAATCCAGAATTAGACCACAATGCACCTTTGGTGGTATCCATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR CCA 90 bp ACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGAAGAACGCGGAGATCTaGCTTACGATTATTCATTCC +
Preference number: 4 (lower is better)
Translates to: TPMICLQVCERAWMLGDRKNAEI*LTIIHS
Trigger: GGAATGAATAATCGTAAGCCAGATCTCCGCGTTCTT...CCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp GAAGTGACATTTGGGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCAAGAACGCGGAGATCTaGCTTACGATTATTCATTCC +
Preference number: 4 (lower is better)
Translates to: EVTFGGPDTPGCSTVLYCKNAEI*LTIIHS
Trigger: GGAATGAATAATCGTAAGCCAGATCTCCGCGTTCTT...GCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCCCAAATGTCACTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CCA 90 bp AAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTATACAAAAAGTCCTTGCGCGTGGTGTGTTGTaGGTATCTCGAAGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: KAWRSSWLRVVLSIQKVLARGVL*VSRRGG
Trigger: ACCACCCCTTCGAGATACCCACAACACACCACGCGC...AAGGACTTTTTGTATAGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp CCCTTTCCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCGCGCGTGGTGTGTTGTaGGTATCTCGAAGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: PFPFLSFLLFSFKVGMVLARGVL*VSRRGG
Trigger: ACCACCCCTTCGAGATACCCACAACACACCACGCGC...GAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGGAAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp CCCTTTCCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCTGCCTCCACAATGTCTaGGTTTGTCCGGCTCTCGTG +
Preference number: 4 (lower is better)
Translates to: PFPFLSFLLFSFKVGMVLCLHNV*VCPALV
Trigger: CACGAGAGCCGGACAAACTCAGACATTGTGGAGGCA...GAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGGAAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000185052.6
ENSMUST00000198199.5
CDS-3UTR TCA 90 bp AAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTATACAAAAAGTCCTTCTTCAGTGCGTGGGGTaGGTGCATAAGAGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: KAWRSSWLRVVLSIQKVLLQCVG*VHKRSQ
Trigger: CTGACTCCTCTTATGCACTCACCCCACGCACTGAAG...AAGGACTTTTTGTATAGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
CDS-3UTR TCA 90 bp GGCAGGGCTAATGTTACTGCATTCTTTGTTCTGTATGTCAGGATTAATGACAGGGGTTTCCCAGTGTGCTaGCAGGATTGCTGTACACCA +
Preference number: 4 (lower is better)
Translates to: GRANVTAFFVLYVRINDRGFPVC*QDCCTP
Trigger: TGGTGTACAGCAATCCTGTCAGCACACTGGGAAACC...CCTGTCATTAATCCTGACATACAGAACAAAGAATGCAGTAACATTAGCCCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR TCA 90 bp CCTTGGTGGGTTTTTACAGGACTGTTTAAAATATTAGCGAAGCTATTGAGGGAAAAGCTCCCAACTGACTaGGGGCAGATGGCGGCATGT +
Preference number: 4 (lower is better)
Translates to: PWWVFTGLFKILAKLLREKLPTD*GQMAAC
Trigger: ACATGCCGCCATCTGCCCTCAGTCAGTTGGGAGCTT...TTCCCTCAATAGCTTCGCTAATATTTTAAACAGTCCTGTAAAAACCCACCAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp GTTATCTTGGTTAGCAAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTTTGATGCTGAGGCTTTaGGTAGAAGGCAGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: VILVSKAWRSSWLRVVLSLMLRL*VEGRER
Trigger: TCTCTCCCTGCCTTCTACTCAAAGCCTCAGCATCAA...AGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTTGCTAACCAAGATAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp CAAGGCAGGCTAGCATCCTATATGGATACCACCAAAGGTGCATTGTGGTCTAATAGGAGAAACAGGTTCTaGCTTGATGCTGAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: QGRLASYMDTTKGALWSNRRNRF*LDAEAL
Trigger: CAAAGCCTCAGCATCAAGTCAGAACCTGTTTCTCCT...ATTAGACCACAATGCACCTTTGGTGGTATCCATATAGGATGCTAGCCTGCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR TCA 90 bp CCTTGGTGGGTTTTTACAGGACTGTTTAAAATATTAGCGAAGCTATTGAGGGAATGGAATTCGTTCCGGTaGTCCTCTCGGTCGCTCCCA +
Preference number: 4 (lower is better)
Translates to: PWWVFTGLFKILAKLLREWNSFR*SSRSLP
Trigger: TGGGAGCGACCGAGAGGATCACCGGAACGAATTCCA...TTCCCTCAATAGCTTCGCTAATATTTTAAACAGTCCTGTAAAAACCCACCAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp CCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCTCTGAATGGAATTCGTTCCGGTaGTCCTCTCGGTCGCTCCCA +
Preference number: 4 (lower is better)
Translates to: PFLSFLLFSFKVGMVLSEWNSFR*SSRSLP
Trigger: TGGGAGCGACCGAGAGGATCACCGGAACGAATTCCA...TTCAGAGAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp GGCAGGGCTAATGTTACTGCATTCTTTGTTCTGTATGTCAGGATTAATGACAGGTCGCATGCGCTTGACTaGAGGACTTTCCCTTTCGTC +
Preference number: 4 (lower is better)
Translates to: GRANVTAFFVLYVRINDRSHALD*RTFPFV
Trigger: GACGAAAGGGAAAGTCCTTCAGTCAAGCGCATGCGA...CCTGTCATTAATCCTGACATACAGAACAAAGAATGCAGTAACATTAGCCCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR TCA 90 bp GTTATCTTGGTTAGCAAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTAGAGTCGCATGCGCTTaGCTGAAGGACTTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: VILVSKAWRSSWLRVVLSRVACA*LKDFPF
Trigger: AAAGGGAAAGTCCTTCAGTCAAGCGCATGCGACTCT...AGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTTGCTAACCAAGATAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp GTTAAGAAAAATATAGCCTCGTTAATAAGGTCTTTTGGCTTCTGCCACCCAGCGGGCTGTCACAGCCATTaGGGCCCTTCTTTCTCAATG +
Preference number: 4 (lower is better)
Translates to: VKKNIASLIRSFGFCHPAGCHSH*GPSFSM
Trigger: CATTGAGAAAGAAGGGCCTCAATGGCTGTGACAGCC...CGCTGGGTGGCAGAAGCCAAAAGACCTTATTAACGAGGCTATATTTTTCTTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR TCA 90 bp CCCTTTCCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCAGGGCTGTGACCTACTaGATCGTCTGCATCGGGATC +
Preference number: 4 (lower is better)
Translates to: PFPFLSFLLFSFKVGMVLRAVTY*IVCIGI
Trigger: GATCCCGATGCAGACGATTCAGTAGGTCACAGCCCT...GAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGGAAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp GTTATCTTGGTTAGCAAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTCACATCCTCAGACACTaGTGGCATCGTGTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: VILVSKAWRSSWLRVVLSHILRH*WHRVLA
Trigger: AGCAAGAACACGATGCCATCAGTGTCTGAGGATGTG...AGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTTGCTAACCAAGATAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR GCA 90 bp CCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTGTTGAAGATGATCAGTaGAATCTCACAGTCGCACAG +
Preference number: 4 (lower is better)
Translates to: PTITGSHHLPGLSKPLYIVEDDQ*NLTVAQ
Trigger: CTGTGCGACTGTGAGATTGCACTGATCATCTTCAAC...AATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp AGCTTGCAGGACTTAGGCTCCAACACAGCTTCTTACTCTGGGCATATTTCTAAAACCGCCTGTGTTACCTaGACTTGGAGGTCTATGTGT +
Preference number: 4 (lower is better)
Translates to: SLQDLGSNTASYSGHISKTACVT*TWRSMC
Trigger: ACACATAGACCTCCAAGTGCAGGTAACACAGGCGGT...TTTAGAAATATGCCCAGAGTAAGAAGCTGTGTTGGAGCCTAAGTCCTGCAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR GCA 90 bp CCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCTCTGAATGTAGGTGCTGCTGCTaGCAGCCAGTTACAGAGCCG +
Preference number: 4 (lower is better)
Translates to: PFLSFLLFSFKVGMVLSECRCCC*QPVTEP
Trigger: CGGCTCTGTAACTGGCTGGCAGCAGCAGCACCTACA...TTCAGAGAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp CCTTGGTGGGTTTTTACAGGACTGTTTAAAATATTAGCGAAGCTATTGAGGGAATGTAGGTGCTGCTGCTaGCAGCCAGTTACAGAGCCG +
Preference number: 4 (lower is better)
Translates to: PWWVFTGLFKILAKLLRECRCCC*QPVTEP
Trigger: CGGCTCTGTAACTGGCTGGCAGCAGCAGCACCTACA...TTCCCTCAATAGCTTCGCTAATATTTTAAACAGTCCTGTAAAAACCCACCAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp AGCTTGCAGGACTTAGGCTCCAACACAGCTTCTTACTCTGGGCATATTTCTAAATTATGTAGGTGCTGCTaGTGCCAGCCAGTTACAGAG +
Preference number: 4 (lower is better)
Translates to: SLQDLGSNTASYSGHISKLCRCC*CQPVTE
Trigger: CTCTGTAACTGGCTGGCAGCAGCAGCACCTACATAA...TTTAGAAATATGCCCAGAGTAAGAAGCTGTGTTGGAGCCTAAGTCCTGCAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR GCA 90 bp CAAGGCAGGCTAGCATCCTATATGGATACCACCAAAGGTGCATTGTGGTCTAATATGTTATGTAGGTGCTaGTGCTGCCAGCCAGTTACA +
Preference number: 4 (lower is better)
Translates to: QGRLASYMDTTKGALWSNMLCRC*CCQPVT
Trigger: TGTAACTGGCTGGCAGCAGCAGCACCTACATAACAT...ATTAGACCACAATGCACCTTTGGTGGTATCCATATAGGATGCTAGCCTGCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR GCA 90 bp CCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTCTATATGATGTTATGTAGGTGCTaGTGCTGCCAGCCAGTTACA +
Preference number: 4 (lower is better)
Translates to: PVVTTCRVCPNLYTFFYMMLCRC*CCQPVT
Trigger: TGTAACTGGCTGGCAGCAGCAGCACCTACATAACAT...CATATAGAAAAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp ACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTAGGAACTGCTACAGCTaGTCAAGCTGTCAACAGGAG +
Preference number: 4 (lower is better)
Translates to: TITGSHHLPGLSKPLYIFRNCYS*SSCQQE
Trigger: CTCCTGTTGACAGCTTGAGCAGCTGTAGCAGTTCCT...AAAAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp GTTATCTTGGTTAGCAAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTTCCCATCGTAGGAACTaGTACAGCTGCTCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: VILVSKAWRSSWLRVVLSSHRRN*YSCSSC
Trigger: ACAGCTTGAGCAGCTGTAGCAGTTCCTACGATGGGA...AGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTTGCTAACCAAGATAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp TTTCCTTCCTCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTACAGCACACAATCTTTaGCTGCTGATCATTAGATCA +
Preference number: 4 (lower is better)
Translates to: FPSSPAPRLSPCSPPELCTAHNL*LLIIRS
Trigger: TGATCTAATGATCAGCAGGCAAAGATTGTGTGCTGT...ACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGAGGAAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CCA 90 bp GTTAAGAAAAATATAGCCTCGTTAATAAGGTCTTTTGGCTTCTGCCACCCAGCGCACTGGGATGGTAACTaGCATCTCAAAGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: VKKNIASLIRSFGFCHPAHWDGN*HLKAGR
Trigger: CCTCCCAGCTTTGAGATGCCAGTTACCATCCCAGTG...CGCTGGGTGGCAGAAGCCAAAAGACCTTATTAACGAGGCTATATTTTTCTTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR CCA 90 bp GGCAGGGCTAATGTTACTGCATTCTTTGTTCTGTATGTCAGGATTAATGACAGGCACTGGGATGGTAACTaGCATCTCAAAGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GRANVTAFFVLYVRINDRHWDGN*HLKAGR
Trigger: CCTCCCAGCTTTGAGATGCCAGTTACCATCCCAGTG...CCTGTCATTAATCCTGACATACAGAACAAAGAATGCAGTAACATTAGCCCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR CCA 90 bp GTTATCTTGGTTAGCAAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTGTTATGGCTGGACACTaGGATGGTAACTGGCATCTC +
Preference number: 4 (lower is better)
Translates to: VILVSKAWRSSWLRVVLSVMAGH*DGNWHL
Trigger: GAGATGCCAGTTACCATCCCAGTGTCCAGCCATAAC...AGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTTGCTAACCAAGATAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp CCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCTCTGAAAGACGGGTGGGCCAGTaGCAGAAGATTGGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: PFLSFLLFSFKVGMVLSERRVGQ*QKIGVS
Trigger: GGAAACCCCAATCTTCTGCCACTGGCCCACCCGTCT...TTCAGAGAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp CCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCTCTGAACTCTGCAGAGACGGGTaGGCCAGTGGCAGAAGATTG +
Preference number: 4 (lower is better)
Translates to: PFLSFLLFSFKVGMVLSELCRDG*ASGRRL
Trigger: CAATCTTCTGCCACTGGCCCACCCGTCTCTGCAGAG...TTCAGAGAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp CCTTGGTGGGTTTTTACAGGACTGTTTAAAATATTAGCGAAGCTATTGAGGGAACTCTGCAGAGACGGGTaGGCCAGTGGCAGAAGATTG +
Preference number: 4 (lower is better)
Translates to: PWWVFTGLFKILAKLLRELCRDG*ASGRRL
Trigger: CAATCTTCTGCCACTGGCCCACCCGTCTCTGCAGAG...TTCCCTCAATAGCTTCGCTAATATTTTAAACAGTCCTGTAAAAACCCACCAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp TTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATGTGTTACCTGCACTTaGAGGTCTATGTGTTACACC +
Preference number: 4 (lower is better)
Translates to: FLQLPVVTTCRVCPNLYTCVTCT*RSMCYT
Trigger: GGTGTAACACATAGACCTCCAAGTGCAGGTAACACA...TGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp CCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCTCTGAAATCCATTCCCTGCGCTaGTGCCTGCACCGGATGTCA +
Preference number: 4 (lower is better)
Translates to: PFLSFLLFSFKVGMVLSEIHSLR*CLHRMS
Trigger: TGACATCCGGTGCAGGCACCAGCGCAGGGAATGGAT...TTCAGAGAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp CCTTGGTGGGTTTTTACAGGACTGTTTAAAATATTAGCGAAGCTATTGAGGGAAATCCATTCCCTGCGCTaGTGCCTGCACCGGATGTCA +
Preference number: 4 (lower is better)
Translates to: PWWVFTGLFKILAKLLREIHSLR*CLHRMS
Trigger: TGACATCCGGTGCAGGCACCAGCGCAGGGAATGGAT...TTCCCTCAATAGCTTCGCTAATATTTTAAACAGTCCTGTAAAAACCCACCAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp TTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGAAGAACGCGGAGATCTaGCTTACGATTATTCATTCC +
Preference number: 4 (lower is better)
Translates to: LNECHTPMICLQVCERAWKNAEI*LTIIHS
Trigger: GGAATGAATAATCGTAAGCCAGATCTCCGCGTTCTT...CCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp CCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCTCTGAAGCGCGTGGTGTGTTGTaGGTATCTCGAAGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: PFLSFLLFSFKVGMVLSEARGVL*VSRRGG
Trigger: ACCACCCCTTCGAGATACCCACAACACACCACGCGC...TTCAGAGAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp AATTTAGGATGTTGCAATGTAATATGTTCTAACCCCACAGCTTATCCTTTTGACCCGCCTCGTGGCGCGTaGTGTGTTGTGGGTATCTCG +
Preference number: 4 (lower is better)
Translates to: NLGCCNVICSNPTAYPFDPPRGA*CVVGIS
Trigger: CGAGATACCCACAACACACCACGCGCCACGAGGCGG...GTCAAAAGGATAAGCTGTGGGGTTAGAACATATTACATTGCAACATCCTAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CCA 90 bp AAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTATACAAAAAGTCCTTGTCTGCATCGGGATCTaGGCTGTCACAGCCATTGAG +
Preference number: 4 (lower is better)
Translates to: KAWRSSWLRVVLSIQKVLVCIGI*AVTAIE
Trigger: CTCAATGGCTGTGACAGCCCAGATCCCGATGCAGAC...AAGGACTTTTTGTATAGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp CAAGGCAGGCTAGCATCCTATATGGATACCACCAAAGGTGCATTGTGGTCTAATCTCAAAGCTGGGAGGTaGAACAGCACACAATCTTTG +
Preference number: 4 (lower is better)
Translates to: QGRLASYMDTTKGALWSNLKAGR*NSTQSL
Trigger: CAAAGATTGTGTGCTGTTCCACCTCCCAGCTTTGAG...ATTAGACCACAATGCACCTTTGGTGGTATCCATATAGGATGCTAGCCTGCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR CCA 90 bp GTTAAGAAAAATATAGCCTCGTTAATAAGGTCTTTTGGCTTCTGCCACCCAGCGCTGGCATCTCAAAGCTaGGAGGTGGAACAGCACACA +
Preference number: 4 (lower is better)
Translates to: VKKNIASLIRSFGFCHPALASQS*EVEQHT
Trigger: TGTGTGCTGTTCCACCTCCCAGCTTTGAGATGCCAG...CGCTGGGTGGCAGAAGCCAAAAGACCTTATTAACGAGGCTATATTTTTCTTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR TCA 90 bp CCCTTTCCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCGGTTTCCCAGTGTGCTaGCAGGATTGCTGTACACCA +
Preference number: 4 (lower is better)
Translates to: PFPFLSFLLFSFKVGMVLGFPVC*QDCCTP
Trigger: TGGTGTACAGCAATCCTGTCAGCACACTGGGAAACC...GAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGGAAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp AAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTATACAAAAAGTCCTTGGGGTAGCCAATGACTaGGCCGACTGGGAGTTATTT +
Preference number: 4 (lower is better)
Translates to: KAWRSSWLRVVLSIQKVLGVAND*ADWELF
Trigger: AAATAACTCCCAGTCGGCTCAGTCATTGGCTACCCC...AAGGACTTTTTGTATAGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp AAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTATACAAAAAGTCCTTGAAGCCAGACAGAGATaGCAGATCTGCGCTACTCAG +
Preference number: 4 (lower is better)
Translates to: KAWRSSWLRVVLSIQKVLEARQR*QICATQ
Trigger: CTGAGTAGCGCAGATCTGTCATCTCTGTCTGGCTTC...AAGGACTTTTTGTATAGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp CAAGGCAGGCTAGCATCCTATATGGATACCACCAAAGGTGCATTGTGGTCTAATTTTCTTGTTCAATGCTaGATCGTCTGCATCGGGATC +
Preference number: 4 (lower is better)
Translates to: QGRLASYMDTTKGALWSNFLVQC*IVCIGI
Trigger: GATCCCGATGCAGACGATTCAGCATTGAACAAGAAA...ATTAGACCACAATGCACCTTTGGTGGTATCCATATAGGATGCTAGCCTGCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163888.8
CDS-3UTR TCA 90 bp CCTTGGTGGGTTTTTACAGGACTGTTTAAAATATTAGCGAAGCTATTGAGGGAAAGGGCTGTGACCTACTaGATCGTCTGCATCGGGATC +
Preference number: 4 (lower is better)
Translates to: PWWVFTGLFKILAKLLRERAVTY*IVCIGI
Trigger: GATCCCGATGCAGACGATTCAGTAGGTCACAGCCCT...TTCCCTCAATAGCTTCGCTAATATTTTAAACAGTCCTGTAAAAACCCACCAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp TATATGGATACCACCAAAGGTGCATTGTGGTCTAATTCTGGATTGCAGATCAAGAGTGCGTGGGGTGAGTaGATAAGAGGAGTCAGGATC +
Preference number: 4 (lower is better)
Translates to: YMDTTKGALWSNSGLQIKSAWGE*IRGVRI
Trigger: GATCCTGACTCCTCTTATGCACTCACCCCACGCACT...CTTGATCTGCAATCCAGAATTAGACCACAATGCACCTTTGGTGGTATCCATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
CDS-3UTR GCA 90 bp AAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTATACAAAAAGTCCTTGACATACTATTCCTCTaGAGAGACGGGTGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: KAWRSSWLRVVLSIQKVLDILFL*RDGWAS
Trigger: ACTGGCCCACCCGTCTCTGCAGAGGAATAGTATGTC...AAGGACTTTTTGTATAGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp CCCTTTCCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCGACATACTATTCCTCTaGAGAGACGGGTGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: PFPFLSFLLFSFKVGMVLDILFL*RDGWAS
Trigger: ACTGGCCCACCCGTCTCTGCAGAGGAATAGTATGTC...GAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGGAAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp GTTAAGAAAAATATAGCCTCGTTAATAAGGTCTTTTGGCTTCTGCCACCCAGCGAGGAACTGCTACAGCTaGTCAAGCTGTCAACAGGAG +
Preference number: 4 (lower is better)
Translates to: VKKNIASLIRSFGFCHPARNCYS*SSCQQE
Trigger: CTCCTGTTGACAGCTTGAGCAGCTGTAGCAGTTCCT...CGCTGGGTGGCAGAAGCCAAAAGACCTTATTAACGAGGCTATATTTTTCTTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR GCA 90 bp GGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCTGACAACATTGTTACAGCACACAATCTTTaGCTGCTGATCATTAGATCA +
Preference number: 4 (lower is better)
Translates to: GVLTHQAVQQSYTADNIVTAHNL*LLIIRS
Trigger: TGATCTAATGATCAGCAGGCAAAGATTGTGTGCTGT...AACAATGTTGTCAGCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR GCA 90 bp TTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGACAGCACACAATCTTTaGCTGCTGATCATTAGATCA +
Preference number: 4 (lower is better)
Translates to: LNECHTPMICLQVCERAWTAHNL*LLIIRS
Trigger: TGATCTAATGATCAGCAGGCAAAGATTGTGTGCTGT...CCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp CCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTCTATATGTTTTTCTTCAGTGCGTaGGGTGAGTGCATAAGAGGA +
Preference number: 4 (lower is better)
Translates to: PVVTTCRVCPNLYTFFYMFFFSA*GECIRG
Trigger: TCCTCTTATGCACTCACCCCACGCACTGAAGAAAAA...CATATAGAAAAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000198199.5
CDS-3UTR CCA 90 bp ATAAGAACGCGGAGATCTGGCTTACGATTATTCATTCCTAGATTCATAGGGGGAGTTATGGCTGGACACTaGGATGGTAACTGGCATCTC +
Preference number: 4 (lower is better)
Translates to: IRTRRSGLRLFIPRFIGGVMAGH*DGNWHL
Trigger: GAGATGCCAGTTACCATCCCAGTGTCCAGCCATAAC...TCCCCCTATGAATCTAGGAATGAATAATCGTAAGCCAGATCTCCGCGTTCTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000198360.2
CDS-3UTR CCA 90 bp GGCAGGGCTAATGTTACTGCATTCTTTGTTCTGTATGTCAGGATTAATGACAGGGTTATGGCTGGACACTaGGATGGTAACTGGCATCTC +
Preference number: 4 (lower is better)
Translates to: GRANVTAFFVLYVRINDRVMAGH*DGNWHL
Trigger: GAGATGCCAGTTACCATCCCAGTGTCCAGCCATAAC...CCTGTCATTAATCCTGACATACAGAACAAAGAATGCAGTAACATTAGCCCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR CCA 90 bp ATCCTTTTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTTACACCAAACTGTTATaGCTGGACACTGGGATGGTA +
Preference number: 4 (lower is better)
Translates to: ILLNECHTPMICLQVCERYTKLL*LDTGMV
Trigger: TACCATCCCAGTGTCCAGCCATAACAGTTTGGTGTA...ACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAAAAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp AGAACGCGGAGATCTGGCTTACGATTATTCATTCCTAGATTCATAGGGGGAGGATACACCAAACTGTTATaGCTGGACACTGGGATGGTA +
Preference number: 4 (lower is better)
Translates to: RTRRSGLRLFIPRFIGGGYTKLL*LDTGMV
Trigger: TACCATCCCAGTGTCCAGCCATAACAGTTTGGTGTA...TCCTCCCCCTATGAATCTAGGAATGAATAATCGTAAGCCAGATCTCCGCGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000198360.2
CDS-3UTR CCA 90 bp CTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTACACCAAACTGTTATaGCTGGACACTGGGATGGTA +
Preference number: 4 (lower is better)
Translates to: LQLPVVTTCRVCPNLYTFYTKLL*LDTGMV
Trigger: TACCATCCCAGTGTCCAGCCATAACAGTTTGGTGTA...AAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp CCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTCTATATGTGTGTTACCTGCACTTaGAGGTCTATGTGTTACACC +
Preference number: 4 (lower is better)
Translates to: PVVTTCRVCPNLYTFFYMCVTCT*RSMCYT
Trigger: GGTGTAACACATAGACCTCCAAGTGCAGGTAACACA...CATATAGAAAAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp GGGAGTTATTTATCCTTTGATTCACTGATGGCATCGTGTTCTTGCTGCCAGGTGTGTGTTACCTGCACTTaGAGGTCTATGTGTTACACC +
Preference number: 4 (lower is better)
Translates to: GSYLSFDSLMASCSCCQVCVTCT*RSMCYT
Trigger: GGTGTAACACATAGACCTCCAAGTGCAGGTAACACA...CACCTGGCAGCAAGAACACGATGCCATCAGTGAATCAAAGGATAAATAACTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198360.2
CDS-3UTR CCA 90 bp ATCCTTTTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTTGTGTTACCTGCACTTaGAGGTCTATGTGTTACACC +
Preference number: 4 (lower is better)
Translates to: ILLNECHTPMICLQVCERCVTCT*RSMCYT
Trigger: GGTGTAACACATAGACCTCCAAGTGCAGGTAACACA...ACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAAAAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp TTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACAAAGAACGCGGAGATCTaGCTTACGATTATTCATTCC +
Preference number: 4 (lower is better)
Translates to: FLQLPVVTTCRVCPNLYTKNAEI*LTIIHS
Trigger: GGAATGAATAATCGTAAGCCAGATCTCCGCGTTCTT...TGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp TATATGGATACCACCAAAGGTGCATTGTGGTCTAATTCTGGATTGCAGATCAAGCTGGCATCTCAAAGCTaGGAGGTGGAACAGCACACA +
Preference number: 4 (lower is better)
Translates to: YMDTTKGALWSNSGLQIKLASQS*EVEQHT
Trigger: TGTGTGCTGTTCCACCTCCCAGCTTTGAGATGCCAG...CTTGATCTGCAATCCAGAATTAGACCACAATGCACCTTTGGTGGTATCCATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR CCA 90 bp CCCTTTCCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCCTGGCATCTCAAAGCTaGGAGGTGGAACAGCACACA +
Preference number: 4 (lower is better)
Translates to: PFPFLSFLLFSFKVGMVLLASQS*EVEQHT
Trigger: TGTGTGCTGTTCCACCTCCCAGCTTTGAGATGCCAG...GAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGGAAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR CAA 72 bp GTAGGTATGGTCCTCTCTGAATGGTTTCTGATCCTTTaGAATGAGTGCCATACGCCAATGATATGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: VGMVLSEWFLIL*NECHTPMICLQ
Trigger: CTGCAGGCATATCATTGGCGTATGGCACTCATTCAAAAGGATCAGAAACCATTCAGAGAGGACCATACCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp CCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCTCTGAAGGTTTCCCAGTGTGCTaGCAGGATTGCTGTACACCA +
Preference number: 4 (lower is better)
Translates to: PFLSFLLFSFKVGMVLSEGFPVC*QDCCTP
Trigger: TGGTGTACAGCAATCCTGTCAGCACACTGGGAAACC...TTCAGAGAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp CCTTGGTGGGTTTTTACAGGACTGTTTAAAATATTAGCGAAGCTATTGAGGGAAGGTTTCCCAGTGTGCTaGCAGGATTGCTGTACACCA +
Preference number: 4 (lower is better)
Translates to: PWWVFTGLFKILAKLLREGFPVC*QDCCTP
Trigger: TGGTGTACAGCAATCCTGTCAGCACACTGGGAAACC...TTCCCTCAATAGCTTCGCTAATATTTTAAACAGTCCTGTAAAAACCCACCAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp ATCCCCCAGAGCTCTGCCCTAGACTTCTCAATACAAAGAACTTGGTGTGATCAATATCCTTTGATTCACTaGTGGCATCGTGTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: IPQSSALDFSIQRTWCDQYPLIH*WHRVLA
Trigger: AGCAAGAACACGATGCCATCAGTGAATCAAAGGATA...TTGATCACACCAAGTTCTTTGTATTGAGAAGTCTAGGGCAGAGCTCTGGGGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
CDS-3UTR TCA 90 bp CCTTGGTGGGTTTTTACAGGACTGTTTAAAATATTAGCGAAGCTATTGAGGGAAGGGGTAGCCAATGACTaGGCCGACTGGGAGTTATTT +
Preference number: 4 (lower is better)
Translates to: PWWVFTGLFKILAKLLREGVAND*ADWELF
Trigger: AAATAACTCCCAGTCGGCTCAGTCATTGGCTACCCC...TTCCCTCAATAGCTTCGCTAATATTTTAAACAGTCCTGTAAAAACCCACCAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp AATCTATTTTGTACAAGTGTTCTGTTGTACAACTCAAGTGCTAAGCGTATCTCAAAGCTCCCAACTGACTaGGGGCAGATGGCGGCATGT +
Preference number: 4 (lower is better)
Translates to: NLFCTSVLLYNSSAKRISKLPTD*GQMAAC
Trigger: ACATGCCGCCATCTGCCCTCAGTCAGTTGGGAGCTT...TGAGATACGCTTAGCACTTGAGTTGTACAACAGAACACTTGTACAAAATAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp GGCAGGGCTAATGTTACTGCATTCTTTGTTCTGTATGTCAGGATTAATGACAGGAGGAGAAACAGGTTCTaGCTTGATGCTGAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: GRANVTAFFVLYVRINDRRRNRF*LDAEAL
Trigger: CAAAGCCTCAGCATCAAGTCAGAACCTGTTTCTCCT...CCTGTCATTAATCCTGACATACAGAACAAAGAATGCAGTAACATTAGCCCTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR TCA 90 bp AATCTATTTTGTACAAGTGTTCTGTTGTACAACTCAAGTGCTAAGCGTATCTCATGGAATTCGTTCCGGTaGTCCTCTCGGTCGCTCCCA +
Preference number: 4 (lower is better)
Translates to: NLFCTSVLLYNSSAKRISWNSFR*SSRSLP
Trigger: TGGGAGCGACCGAGAGGATCACCGGAACGAATTCCA...TGAGATACGCTTAGCACTTGAGTTGTACAACAGAACACTTGTACAAAATAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp AAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTATACAAAAAGTCCTTAGAGTCGCATGCGCTTaGCTGAAGGACTTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: KAWRSSWLRVVLSIQKVLRVACA*LKDFPF
Trigger: AAAGGGAAAGTCCTTCAGTCAAGCGCATGCGACTCT...AAGGACTTTTTGTATAGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp CCCTTTCCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCAGAGTCGCATGCGCTTaGCTGAAGGACTTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: PFPFLSFLLFSFKVGMVLRVACA*LKDFPF
Trigger: AAAGGGAAAGTCCTTCAGTCAAGCGCATGCGACTCT...GAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGGAAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp CCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCTCTGAATCAGACTCAGGGCTGTaGCCTACTGAATCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PFLSFLLFSFKVGMVLSESDSGL*PTESSA
Trigger: TGCAGACGATTCAGTAGGTCACAGCCCTGAGTCTGA...TTCAGAGAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp AATTTAGGATGTTGCAATGTAATATGTTCTAACCCCACAGCTTATCCTTTTGACTTTGTCCGGCTCTCGTaGGGCTCGTTGTACTCGGTG +
Preference number: 4 (lower is better)
Translates to: NLGCCNVICSNPTAYPFDFVRLS*GSLYSV
Trigger: CACCGAGTACAACGAGCCGCACGAGAGCCGGACAAA...GTCAAAAGGATAAGCTGTGGGGTTAGAACATATTACATTGCAACATCCTAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR GCA 90 bp AATCTATTTTGTACAAGTGTTCTGTTGTACAACTCAAGTGCTAAGCGTATCTCATTTGTCCGGCTCTCGTaGGGCTCGTTGTACTCGGTG +
Preference number: 4 (lower is better)
Translates to: NLFCTSVLLYNSSAKRISFVRLS*GSLYSV
Trigger: CACCGAGTACAACGAGCCGCACGAGAGCCGGACAAA...TGAGATACGCTTAGCACTTGAGTTGTACAACAGAACACTTGTACAAAATAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp CCTTGGTGGGTTTTTACAGGACTGTTTAAAATATTAGCGAAGCTATTGAGGGAAGACATACTATTCCTCTaGAGAGACGGGTGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: PWWVFTGLFKILAKLLREDILFL*RDGWAS
Trigger: ACTGGCCCACCCGTCTCTGCAGAGGAATAGTATGTC...TTCCCTCAATAGCTTCGCTAATATTTTAAACAGTCCTGTAAAAACCCACCAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp CCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCTCTGAAGACATACTATTCCTCTaGAGAGACGGGTGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: PFLSFLLFSFKVGMVLSEDILFL*RDGWAS
Trigger: ACTGGCCCACCCGTCTCTGCAGAGGAATAGTATGTC...TTCAGAGAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp AATCTATTTTGTACAAGTGTTCTGTTGTACAACTCAAGTGCTAAGCGTATCTCATGTAGGTGCTGCTGCTaGCAGCCAGTTACAGAGCCG +
Preference number: 4 (lower is better)
Translates to: NLFCTSVLLYNSSAKRISCRCCC*QPVTEP
Trigger: CGGCTCTGTAACTGGCTGGCAGCAGCAGCACCTACA...TGAGATACGCTTAGCACTTGAGTTGTACAACAGAACACTTGTACAAAATAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp AAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTATACAAAAAGTCCTTTTATGTAGGTGCTGCTaGTGCCAGCCAGTTACAGAG +
Preference number: 4 (lower is better)
Translates to: KAWRSSWLRVVLSIQKVLLCRCC*CQPVTE
Trigger: CTCTGTAACTGGCTGGCAGCAGCAGCACCTACATAA...AAGGACTTTTTGTATAGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp AAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTATACAAAAAGTCCTTAGGAACTGCTACAGCTaGTCAAGCTGTCAACAGGAG +
Preference number: 4 (lower is better)
Translates to: KAWRSSWLRVVLSIQKVLRNCYS*SSCQQE
Trigger: CTCCTGTTGACAGCTTGAGCAGCTGTAGCAGTTCCT...AAGGACTTTTTGTATAGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp AAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTATACAAAAAGTCCTTTCCCATCGTAGGAACTaGTACAGCTGCTCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: KAWRSSWLRVVLSIQKVLSHRRN*YSCSSC
Trigger: ACAGCTTGAGCAGCTGTAGCAGTTCCTACGATGGGA...AAGGACTTTTTGTATAGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp TTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACAACAGCACACAATCTTTaGCTGCTGATCATTAGATCA +
Preference number: 4 (lower is better)
Translates to: FLQLPVVTTCRVCPNLYTTAHNL*LLIIRS
Trigger: TGATCTAATGATCAGCAGGCAAAGATTGTGTGCTGT...TGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp AGCTTGCAGGACTTAGGCTCCAACACAGCTTCTTACTCTGGGCATATTTCTAAATTTTTCTTCAGTGCGTaGGGTGAGTGCATAAGAGGA +
Preference number: 4 (lower is better)
Translates to: SLQDLGSNTASYSGHISKFFFSA*GECIRG
Trigger: TCCTCTTATGCACTCACCCCACGCACTGAAGAAAAA...TTTAGAAATATGCCCAGAGTAAGAAGCTGTGTTGGAGCCTAAGTCCTGCAAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
CDS-3UTR CCA 90 bp CCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCTCTGAACACTGGGATGGTAACTaGCATCTCAAAGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: PFLSFLLFSFKVGMVLSEHWDGN*HLKAGR
Trigger: CCTCCCAGCTTTGAGATGCCAGTTACCATCCCAGTG...TTCAGAGAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp AGAGTACACTGCTGCATTCAAACCACAACTAGAATCCAACACTTAGCGAACCTCTACACCAAACTGTTATaGCTGGACACTGGGATGGTA +
Preference number: 4 (lower is better)
Translates to: RVHCCIQTTTRIQHLANLYTKLL*LDTGMV
Trigger: TACCATCCCAGTGTCCAGCCATAACAGTTTGGTGTA...GAGGTTCGCTAAGTGTTGGATTCTAGTTGTGGTTTGAATGCAGCAGTGTACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
CDS-3UTR CCA 90 bp GTTATCTTGGTTAGCAAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTTACACCAAACTGTTATaGCTGGACACTGGGATGGTA +
Preference number: 4 (lower is better)
Translates to: VILVSKAWRSSWLRVVLSYTKLL*LDTGMV
Trigger: TACCATCCCAGTGTCCAGCCATAACAGTTTGGTGTA...AGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTTGCTAACCAAGATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp ACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTTACACCAAACTGTTATaGCTGGACACTGGGATGGTA +
Preference number: 4 (lower is better)
Translates to: TITGSHHLPGLSKPLYIFYTKLL*LDTGMV
Trigger: TACCATCCCAGTGTCCAGCCATAACAGTTTGGTGTA...AAAAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp AATTTAGGATGTTGCAATGTAATATGTTCTAACCCCACAGCTTATCCTTTTGACCTCTGCAGAGACGGGTaGGCCAGTGGCAGAAGATTG +
Preference number: 4 (lower is better)
Translates to: NLGCCNVICSNPTAYPFDLCRDG*ASGRRL
Trigger: CAATCTTCTGCCACTGGCCCACCCGTCTCTGCAGAG...GTCAAAAGGATAAGCTGTGGGGTTAGAACATATTACATTGCAACATCCTAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CCA 90 bp ACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTTGTGTTACCTGCACTTaGAGGTCTATGTGTTACACC +
Preference number: 4 (lower is better)
Translates to: TITGSHHLPGLSKPLYIFCVTCT*RSMCYT
Trigger: GGTGTAACACATAGACCTCCAAGTGCAGGTAACACA...AAAAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp GTTATCTTGGTTAGCAAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTTGTGTTACCTGCACTTaGAGGTCTATGTGTTACACC +
Preference number: 4 (lower is better)
Translates to: VILVSKAWRSSWLRVVLSCVTCT*RSMCYT
Trigger: GGTGTAACACATAGACCTCCAAGTGCAGGTAACACA...AGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTTGCTAACCAAGATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp CCTTGGTGGGTTTTTACAGGACTGTTTAAAATATTAGCGAAGCTATTGAGGGAAGTTCTTGCTGCCAGGTaGGATAAGAACGCGGAGATC +
Preference number: 4 (lower is better)
Translates to: PWWVFTGLFKILAKLLREVLAAR*DKNAEI
Trigger: GATCTCCGCGTTCTTATCCCACCTGGCAGCAAGAAC...TTCCCTCAATAGCTTCGCTAATATTTTAAACAGTCCTGTAAAAACCCACCAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp AATCTATTTTGTACAAGTGTTCTGTTGTACAACTCAAGTGCTAAGCGTATCTCAGCGCGTGGTGTGTTGTaGGTATCTCGAAGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: NLFCTSVLLYNSSAKRISARGVL*VSRRGG
Trigger: ACCACCCCTTCGAGATACCCACAACACACCACGCGC...TGAGATACGCTTAGCACTTGAGTTGTACAACAGAACACTTGTACAAAATAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp GTTATCTTGGTTAGCAAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTTATCCTTTGATTCACTaGTGGCATCGTGTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: VILVSKAWRSSWLRVVLSYPLIH*WHRVLA
Trigger: AGCAAGAACACGATGCCATCAGTGAATCAAAGGATA...AGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTTGCTAACCAAGATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp AAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTATACAAAAAGTCCTTAGGAGAAACAGGTTCTaGCTTGATGCTGAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: KAWRSSWLRVVLSIQKVLRRNRF*LDAEAL
Trigger: CAAAGCCTCAGCATCAAGTCAGAACCTGTTTCTCCT...AAGGACTTTTTGTATAGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp CCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCTCTGAAACCGCCTGTGTTACCTaGACTTGGAGGTCTATGTGT +
Preference number: 4 (lower is better)
Translates to: PFLSFLLFSFKVGMVLSETACVT*TWRSMC
Trigger: ACACATAGACCTCCAAGTGCAGGTAACACAGGCGGT...TTCAGAGAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp CCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCTCTGAAAGGAACTGCTACAGCTaGTCAAGCTGTCAACAGGAG +
Preference number: 4 (lower is better)
Translates to: PFLSFLLFSFKVGMVLSERNCYS*SSCQQE
Trigger: CTCCTGTTGACAGCTTGAGCAGCTGTAGCAGTTCCT...TTCAGAGAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp CCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCTCTGAATCCCATCGTAGGAACTaGTACAGCTGCTCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: PFLSFLLFSFKVGMVLSESHRRN*YSCSSC
Trigger: ACAGCTTGAGCAGCTGTAGCAGTTCCTACGATGGGA...TTCAGAGAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp CCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTCTATATGACAGCACACAATCTTTaGCTGCTGATCATTAGATCA +
Preference number: 4 (lower is better)
Translates to: PVVTTCRVCPNLYTFFYMTAHNL*LLIIRS
Trigger: TGATCTAATGATCAGCAGGCAAAGATTGTGTGCTGT...CATATAGAAAAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp CCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCTCTGAAGTTATGGCTGGACACTaGGATGGTAACTGGCATCTC +
Preference number: 4 (lower is better)
Translates to: PFLSFLLFSFKVGMVLSEVMAGH*DGNWHL
Trigger: GAGATGCCAGTTACCATCCCAGTGTCCAGCCATAAC...TTCAGAGAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp GTTATCTTGGTTAGCAAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTAAGAACGCGGAGATCTaGCTTACGATTATTCATTCC +
Preference number: 4 (lower is better)
Translates to: VILVSKAWRSSWLRVVLSKNAEI*LTIIHS
Trigger: GGAATGAATAATCGTAAGCCAGATCTCCGCGTTCTT...AGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTTGCTAACCAAGATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp AATCTATTTTGTACAAGTGTTCTGTTGTACAACTCAAGTGCTAAGCGTATCTCAGTCTGCATCGGGATCTaGGCTGTCACAGCCATTGAG +
Preference number: 4 (lower is better)
Translates to: NLFCTSVLLYNSSAKRISVCIGI*AVTAIE
Trigger: CTCAATGGCTGTGACAGCCCAGATCCCGATGCAGAC...TGAGATACGCTTAGCACTTGAGTTGTACAACAGAACACTTGTACAAAATAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp CCCTTTCCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCCTCAAAGCTGGGAGGTaGAACAGCACACAATCTTTG +
Preference number: 4 (lower is better)
Translates to: PFPFLSFLLFSFKVGMVLLKAGR*NSTQSL
Trigger: CAAAGATTGTGTGCTGTTCCACCTCCCAGCTTTGAG...GAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGGAAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp AATTTAGGATGTTGCAATGTAATATGTTCTAACCCCACAGCTTATCCTTTTGACGGTTTCCCAGTGTGCTaGCAGGATTGCTGTACACCA +
Preference number: 4 (lower is better)
Translates to: NLGCCNVICSNPTAYPFDGFPVC*QDCCTP
Trigger: TGGTGTACAGCAATCCTGTCAGCACACTGGGAAACC...GTCAAAAGGATAAGCTGTGGGGTTAGAACATATTACATTGCAACATCCTAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR TCA 90 bp AATCTATTTTGTACAAGTGTTCTGTTGTACAACTCAAGTGCTAAGCGTATCTCAGGGGTAGCCAATGACTaGGCCGACTGGGAGTTATTT +
Preference number: 4 (lower is better)
Translates to: NLFCTSVLLYNSSAKRISGVAND*ADWELF
Trigger: AAATAACTCCCAGTCGGCTCAGTCATTGGCTACCCC...TGAGATACGCTTAGCACTTGAGTTGTACAACAGAACACTTGTACAAAATAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp AATCTATTTTGTACAAGTGTTCTGTTGTACAACTCAAGTGCTAAGCGTATCTCATCGCATGCGCTTGACTaGAGGACTTTCCCTTTCGTC +
Preference number: 4 (lower is better)
Translates to: NLFCTSVLLYNSSAKRISSHALD*RTFPFV
Trigger: GACGAAAGGGAAAGTCCTTCAGTCAAGCGCATGCGA...TGAGATACGCTTAGCACTTGAGTTGTACAACAGAACACTTGTACAAAATAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp AATTTAGGATGTTGCAATGTAATATGTTCTAACCCCACAGCTTATCCTTTTGACTGTCTCCACAATGTCTaGGTTTGTCCGGCTCTCGTG +
Preference number: 4 (lower is better)
Translates to: NLGCCNVICSNPTAYPFDCLHNV*VCPALV
Trigger: CACGAGAGCCGGACAAACTCAGACATTGTGGAGACA...GTCAAAAGGATAAGCTGTGGGGTTAGAACATATTACATTGCAACATCCTAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR TCA 90 bp AATCTATTTTGTACAAGTGTTCTGTTGTACAACTCAAGTGCTAAGCGTATCTCAGGCTGTCACAGCCATTaGGGCCCTTCTTTCTCAATG +
Preference number: 4 (lower is better)
Translates to: NLFCTSVLLYNSSAKRISGCHSH*GPSFSM
Trigger: CATTGAGAAAGAAGGGCCTCAATGGCTGTGACAGCC...TGAGATACGCTTAGCACTTGAGTTGTACAACAGAACACTTGTACAAAATAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp AATTTAGGATGTTGCAATGTAATATGTTCTAACCCCACAGCTTATCCTTTTGACGGCTGTCACAGCCATTaGGGCCCTTCTTTCTCAATG +
Preference number: 4 (lower is better)
Translates to: NLGCCNVICSNPTAYPFDGCHSH*GPSFSM
Trigger: CATTGAGAAAGAAGGGCCTCAATGGCTGTGACAGCC...GTCAAAAGGATAAGCTGTGGGGTTAGAACATATTACATTGCAACATCCTAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR GCA 90 bp CCCTTTCCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCGTTGAAGATGATCAGTaGAATCTCACAGTCGCACAG +
Preference number: 4 (lower is better)
Translates to: PFPFLSFLLFSFKVGMVLVEDDQ*NLTVAQ
Trigger: CTGTGCGACTGTGAGATTGCACTGATCATCTTCAAC...GAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGGAAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp AATCTATTTTGTACAAGTGTTCTGTTGTACAACTCAAGTGCTAAGCGTATCTCAGGCATGTTATGTAGGTaGTGCTGCTGCCAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: NLFCTSVLLYNSSAKRISGMLCR*CCCQPV
Trigger: AACTGGCTGGCAGCAGCAGCACCTACATAACATGCC...TGAGATACGCTTAGCACTTGAGTTGTACAACAGAACACTTGTACAAAATAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp AGAGTACACTGCTGCATTCAAACCACAACTAGAATCCAACACTTAGCGAACCTCACAGCACACAATCTTTaGCTGCTGATCATTAGATCA +
Preference number: 4 (lower is better)
Translates to: RVHCCIQTTTRIQHLANLTAHNL*LLIIRS
Trigger: TGATCTAATGATCAGCAGGCAAAGATTGTGTGCTGT...GAGGTTCGCTAAGTGTTGGATTCTAGTTGTGGTTTGAATGCAGCAGTGTACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197146.5
CDS-3UTR CCA 90 bp AATTTAGGATGTTGCAATGTAATATGTTCTAACCCCACAGCTTATCCTTTTGACCACTGGGATGGTAACTaGCATCTCAAAGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: NLGCCNVICSNPTAYPFDHWDGN*HLKAGR
Trigger: CCTCCCAGCTTTGAGATGCCAGTTACCATCCCAGTG...GTCAAAAGGATAAGCTGTGGGGTTAGAACATATTACATTGCAACATCCTAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CCA 90 bp GGCAGGGCTAATGTTACTGCATTCTTTGTTCTGTATGTCAGGATTAATGACAGGAAGAACGCGGAGATCTaGCTTACGATTATTCATTCC +
Preference number: 4 (lower is better)
Translates to: GRANVTAFFVLYVRINDRKNAEI*LTIIHS
Trigger: GGAATGAATAATCGTAAGCCAGATCTCCGCGTTCTT...CCTGTCATTAATCCTGACATACAGAACAAAGAATGCAGTAACATTAGCCCTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
3UTR CAA 72 bp AGGCTAGCATCCTATATGGATACCACCAAAGGTGCATaGTGGTCTAATTCTGGATTGCAGATCAAGTTAAGA +
Preference number: 4 (lower is better)
Translates to: RLASYMDTTKGA*WSNSGLQIKLR
Trigger: TCTTAACTTGATCTGCAATCCAGAATTAGACCACAATGCACCTTTGGTGGTATCCATATAGGATGCTAGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR TCA 90 bp CCCTTTCCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCTATCCTTTGATTCACTaGTGGCATCGTGTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: PFPFLSFLLFSFKVGMVLYPLIH*WHRVLA
Trigger: AGCAAGAACACGATGCCATCAGTGAATCAAAGGATA...GAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGGAAAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000198199.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp AATTTAGGATGTTGCAATGTAATATGTTCTAACCCCACAGCTTATCCTTTTGACTTGATGCTGAGGCTTTaGGTAGAAGGCAGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: NLGCCNVICSNPTAYPFDLMLRL*VEGRER
Trigger: TCTCTCCCTGCCTTCTACTCAAAGCCTCAGCATCAA...GTCAAAAGGATAAGCTGTGGGGTTAGAACATATTACATTGCAACATCCTAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR TCA 90 bp AATCTATTTTGTACAAGTGTTCTGTTGTACAACTCAAGTGCTAAGCGTATCTCATTGATGCTGAGGCTTTaGGTAGAAGGCAGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: NLFCTSVLLYNSSAKRISLMLRL*VEGRER
Trigger: TCTCTCCCTGCCTTCTACTCAAAGCCTCAGCATCAA...TGAGATACGCTTAGCACTTGAGTTGTACAACAGAACACTTGTACAAAATAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp CCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCTCTGAAGTTGAAGATGATCAGTaGAATCTCACAGTCGCACAG +
Preference number: 4 (lower is better)
Translates to: PFLSFLLFSFKVGMVLSEVEDDQ*NLTVAQ
Trigger: CTGTGCGACTGTGAGATTGCACTGATCATCTTCAAC...TTCAGAGAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp AATCTATTTTGTACAAGTGTTCTGTTGTACAACTCAAGTGCTAAGCGTATCTCATTATGTAGGTGCTGCTaGTGCCAGCCAGTTACAGAG +
Preference number: 4 (lower is better)
Translates to: NLFCTSVLLYNSSAKRISLCRCC*CQPVTE
Trigger: CTCTGTAACTGGCTGGCAGCAGCAGCACCTACATAA...TGAGATACGCTTAGCACTTGAGTTGTACAACAGAACACTTGTACAAAATAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR GCA 90 bp AATCTATTTTGTACAAGTGTTCTGTTGTACAACTCAAGTGCTAAGCGTATCTCAAGGAACTGCTACAGCTaGTCAAGCTGTCAACAGGAG +
Preference number: 4 (lower is better)
Translates to: NLFCTSVLLYNSSAKRISRNCYS*SSCQQE
Trigger: CTCCTGTTGACAGCTTGAGCAGCTGTAGCAGTTCCT...TGAGATACGCTTAGCACTTGAGTTGTACAACAGAACACTTGTACAAAATAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp CCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCTCTGAATTTTTCTTCAGTGCGTaGGGTGAGTGCATAAGAGGA +
Preference number: 4 (lower is better)
Translates to: PFLSFLLFSFKVGMVLSEFFFSA*GECIRG
Trigger: TCCTCTTATGCACTCACCCCACGCACTGAAGAAAAA...TTCAGAGAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000198199.5
CDS-3UTR CCA 90 bp AATCTATTTTGTACAAGTGTTCTGTTGTACAACTCAAGTGCTAAGCGTATCTCAGTTATGGCTGGACACTaGGATGGTAACTGGCATCTC +
Preference number: 4 (lower is better)
Translates to: NLFCTSVLLYNSSAKRISVMAGH*DGNWHL
Trigger: GAGATGCCAGTTACCATCCCAGTGTCCAGCCATAAC...TGAGATACGCTTAGCACTTGAGTTGTACAACAGAACACTTGTACAAAATAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp AATTTAGGATGTTGCAATGTAATATGTTCTAACCCCACAGCTTATCCTTTTGACGTTATGGCTGGACACTaGGATGGTAACTGGCATCTC +
Preference number: 4 (lower is better)
Translates to: NLGCCNVICSNPTAYPFDVMAGH*DGNWHL
Trigger: GAGATGCCAGTTACCATCCCAGTGTCCAGCCATAAC...GTCAAAAGGATAAGCTGTGGGGTTAGAACATATTACATTGCAACATCCTAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CCA 90 bp CCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCTCTGAATACACCAAACTGTTATaGCTGGACACTGGGATGGTA +
Preference number: 4 (lower is better)
Translates to: PFLSFLLFSFKVGMVLSEYTKLL*LDTGMV
Trigger: TACCATCCCAGTGTCCAGCCATAACAGTTTGGTGTA...TTCAGAGAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp CCTTGGTGGGTTTTTACAGGACTGTTTAAAATATTAGCGAAGCTATTGAGGGAATACACCAAACTGTTATaGCTGGACACTGGGATGGTA +
Preference number: 4 (lower is better)
Translates to: PWWVFTGLFKILAKLLREYTKLL*LDTGMV
Trigger: TACCATCCCAGTGTCCAGCCATAACAGTTTGGTGTA...TTCCCTCAATAGCTTCGCTAATATTTTAAACAGTCCTGTAAAAACCCACCAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp CCCTTTCCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCAAGAACGCGGAGATCTaGCTTACGATTATTCATTCC +
Preference number: 4 (lower is better)
Translates to: PFPFLSFLLFSFKVGMVLKNAEI*LTIIHS
Trigger: GGAATGAATAATCGTAAGCCAGATCTCCGCGTTCTT...GAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGGAAAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR TCA 90 bp CCTTGGTGGGTTTTTACAGGACTGTTTAAAATATTAGCGAAGCTATTGAGGGAATATCCTTTGATTCACTaGTGGCATCGTGTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: PWWVFTGLFKILAKLLREYPLIH*WHRVLA
Trigger: AGCAAGAACACGATGCCATCAGTGAATCAAAGGATA...TTCCCTCAATAGCTTCGCTAATATTTTAAACAGTCCTGTAAAAACCCACCAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000199432.5
ENSMUST00000199450.5
3UTR CAA 72 bp AGCTTATGCCGCTGTGAGCCTCTATTTGAATACTTGTaGCAAATGCTTGTATGCCCTCATTTACAAGCTATT +
Preference number: 4 (lower is better)
Translates to: SLCRCEPLFEYL*QMLVCPHLQAI
Trigger: AATAGCTTGTAAATGAGGGCATACAAGCATTTGCAACAAGTATTCAAATAGAGGCTCACAGCGGCATAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
CDS-3UTR CCA 90 bp AATCTATTTTGTACAAGTGTTCTGTTGTACAACTCAAGTGCTAAGCGTATCTCATACACCAAACTGTTATaGCTGGACACTGGGATGGTA +
Preference number: 4 (lower is better)
Translates to: NLFCTSVLLYNSSAKRISYTKLL*LDTGMV
Trigger: TACCATCCCAGTGTCCAGCCATAACAGTTTGGTGTA...TGAGATACGCTTAGCACTTGAGTTGTACAACAGAACACTTGTACAAAATAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CCA 90 bp AATTTAGGATGTTGCAATGTAATATGTTCTAACCCCACAGCTTATCCTTTTGACTGTGTTACCTGCACTTaGAGGTCTATGTGTTACACC +
Preference number: 4 (lower is better)
Translates to: NLGCCNVICSNPTAYPFDCVTCT*RSMCYT
Trigger: GGTGTAACACATAGACCTCCAAGTGCAGGTAACACA...GTCAAAAGGATAAGCTGTGGGGTTAGAACATATTACATTGCAACATCCTAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CCA 90 bp AATTTAGGATGTTGCAATGTAATATGTTCTAACCCCACAGCTTATCCTTTTGACAAGAACGCGGAGATCTaGCTTACGATTATTCATTCC +
Preference number: 4 (lower is better)
Translates to: NLGCCNVICSNPTAYPFDKNAEI*LTIIHS
Trigger: GGAATGAATAATCGTAAGCCAGATCTCCGCGTTCTT...GTCAAAAGGATAAGCTGTGGGGTTAGAACATATTACATTGCAACATCCTAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
3UTR CAA 72 bp TATTTCCAGCAGGAGAAACTTTTGAAAATTTCCCACTaGAATTCACTACAGACAGCTGAATTTAAGTCCCTT +
Preference number: 4 (lower is better)
Translates to: YFQQEKLLKISH*NSLQTAEFKSL
Trigger: AAGGGACTTAAATTCAGCTGTCTGTAGTGAATTCAAGTGGGAAATTTTCAAAAGTTTCTCCTGCTGGAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
3UTR CAA 72 bp TTATATGATCCTTTCCTACCCACTGGTAAGATTCTATaGATCTTGATGAACAAATGCACTTTGAAAGGACAA +
Preference number: 4 (lower is better)
Translates to: LYDPFLPTGKIL*ILMNKCTLKGQ
Trigger: TTGTCCTTTCAAAGTGCATTTGTTCATCAAGATCAATAGAATCTTACCAGTGGGTAGGAAAGGATCATATAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
CDS GCA 90 bp TCCGGTGATCCTCTCGGTCGCTCCCATCGTAGGAACTGCTACAGCTaGTCAAGCTGTCAACAGGAGACCTCCCCGCCTCGTGGCGCGTGG +
Preference number: 5 (lower is better)
Translates to: SGDPLGRSHRRNCYS*SSCQQETSPPRGAW
Trigger: CCACGCGCCACGAGGCGGGGAGGTCTCCTGTTGACAGCTTGAGCAGCTGTAGCAGTTCCTACGATGGGAGCGACCGAGAGGATCACCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000198217.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199210.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS CCA 90 bp CTGCTACAGCTGCTCAAGCTGTCAACAGGAGACCTCCCCGCCTCGTaGCGCGTGGTGTGTTGTGGGTATCTCGAAGGGGTGGTGGTACGG +
Preference number: 5 (lower is better)
Translates to: LLQLLKLSTGDLPAS*RVVCCGYLEGVVVR
Trigger: CCGTACCACCACCCCTTCGAGATACCCACAACACACCACGCGCCACGAGGCGGGGAGGTCTCCTGTTGACAGCTTGAGCAGCTGTAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000198217.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199210.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS CCA 90 bp GCTGTCAACAGGAGACCTCCCCGCCTCGTGGCGCGTGGTGTGTTGTaGGTATCTCGAAGGGGTGGTGGTACGGTCTCCCAACTGACTGAG +
Preference number: 5 (lower is better)
Translates to: AVNRRPPRLVARGVL*VSRRGGGTVSQLTE
Trigger: CTCAGTCAGTTGGGAGACCGTACCACCACCCCTTCGAGATACCCACAACACACCACGCGCCACGAGGCGGGGAGGTCTCCTGTTGACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199210.5
ENSMUST00000199432.5
CDS CCA 90 bp AGCTGCTCAAGCTGTCAACAGGAGACCTCCCCGCCTCGTGGCGCGTaGTGTGTTGTGGGTATCTCGAAGGGGTGGTGGTACGGTCTCCCA +
Preference number: 5 (lower is better)
Translates to: SCSSCQQETSPPRGA*CVVGISKGWWYGLP
Trigger: TGGGAGACCGTACCACCACCCCTTCGAGATACCCACAACACACCACGCGCCACGAGGCGGGGAGGTCTCCTGTTGACAGCTTGAGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199210.5
ENSMUST00000199432.5
CDS CCA 90 bp GCTGTCAACAGGAGACCTCCCCGCCTCGTGGCGCGTGGTGTGTTGTaGGTATCTCGAAGGGGTGGTGGTACGGTCTCTAGGAGGAGAAAC +
Preference number: 5 (lower is better)
Translates to: AVNRRPPRLVARGVL*VSRRGGGTVSRRRN
Trigger: GTTTCTCCTCCTAGAGACCGTACCACCACCCCTTCGAGATACCCACAACACACCACGCGCCACGAGGCGGGGAGGTCTCCTGTTGACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197722.5
ENSMUST00000198217.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp CTTTCGTCCGGCGAAGGTCTGGTGAGTCCAATGGGGGAGTGGAATTCGTTCCGGGTGGCGCGTGGTGTGTaGTGGGTATCTCGAAGGGGT +
Preference number: 5 (lower is better)
Translates to: LSSGEGLVSPMGEWNSFRVARGV*WVSRRG
Trigger: ACCCCTTCGAGATACCCACAACACACCACGCGCCAC...CCGGAACGAATTCCACTCCCCCATTGGACTCACCAGACCTTCGCCGGACGAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS GCA 90 bp GGAATTCGTTCCGGTGATCCTCTCGGTCGCTCCCATCGTAGGAACTaGTACAGCTGCTCAAGCTGTCAACAGGAGACCTCCCCGCCTCGT +
Preference number: 5 (lower is better)
Translates to: GIRSGDPLGRSHRRN*YSCSSCQQETSPPR
Trigger: ACGAGGCGGGGAGGTCTCCTGTTGACAGCTTGAGCAGCTGTAGCAGTTCCTACGATGGGAGCGACCGAGAGGATCACCGGAACGAATTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000198217.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199210.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp CGGCGAAGGTCTGGTGAGTCCAATGGGGGAGTGGAATTCGTTCCGGTGATCCTCAGCGCACTGGCAGTGTaGAAGCCAGACAGAGATGAC +
Preference number: 5 (lower is better)
Translates to: RRRSGESNGGVEFVPVILSALAV*KPDRDD
Trigger: GTCATCTCTGTCTGGCTTCAACACTGCCAGTGCGCT...GAGGATCACCGGAACGAATTCCACTCCCCCATTGGACTCACCAGACCTTCGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR CAA 90 bp AGTGGAATTCGTTCCGGTGATCCTCTCGGTCGCTCCCATCGTAGGAACTGCTACGTGGCGCGTGGTGTGTaGTGGGTATCTCGAAGGGGT +
Preference number: 5 (lower is better)
Translates to: SGIRSGDPLGRSHRRNCYVARGV*WVSRRG
Trigger: ACCCCTTCGAGATACCCACAACACACCACGCGCCAC...GTAGCAGTTCCTACGATGGGAGCGACCGAGAGGATCACCGGAACGAATTCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS TCA 90 bp GCTGCCAGCCAGTTACAGAGCCGAGGTGGAGCGCACTGGCAGTGTTaGAGCCAGACAGAGATGACAGATCTGCGCTACTCAGAGAGTACT +
Preference number: 5 (lower is better)
Translates to: AASQLQSRGGAHWQC*SQTEMTDLRYSEST
Trigger: AGTACTCTCTGAGTAGCGCAGATCTGTCATCTCTGTCTGGCTTCAACACTGCCAGTGCGCTCCACCTCGGCTCTGTAACTGGCTGGCAGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197145.2
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000198217.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199210.5
ENSMUST00000199432.5
ENSMUST00000199450.5
ENSMUST00000200138.5
CDS-3UTR CAA 90 bp TTCGTCCGGCGAAGGTCTGGTGAGTCCAATGGGGGAGTGGAATTCGTTCCGGTGGATGGCATCGTGTTCTaGCTGCCAGGTGGGATAAGA +
Preference number: 5 (lower is better)
Translates to: FVRRRSGESNGGVEFVPVDGIVF*LPGGIR
Trigger: TCTTATCCCACCTGGCAGCAAGAACACGATGCCATC...CACCGGAACGAATTCCACTCCCCCATTGGACTCACCAGACCTTCGCCGGACGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS TCA 90 bp GAGACGGGTGGGCCAGTGGCAGAAGATTGGGGTTTCCCAGTGTGCTaGCAGGATTGCTGTACACCAAACTGTTATGGCTGGACACTGGGA +
Preference number: 5 (lower is better)
Translates to: ETGGPVAEDWGFPVC*QDCCTPNCYGWTLG
Trigger: TCCCAGTGTCCAGCCATAACAGTTTGGTGTACAGCAATCCTGTCAGCACACTGGGAAACCCCAATCTTCTGCCACTGGCCCACCCGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000195984.5
ENSMUST00000196730.5
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000197938.5
ENSMUST00000198199.5
ENSMUST00000198217.5
ENSMUST00000198360.2
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199167.5
ENSMUST00000199210.5
ENSMUST00000199432.5
ENSMUST00000199450.5
ENSMUST00000200138.5
CDS-3UTR CAA 90 bp CGAAGGTCTGGTGAGTCCAATGGGGGAGTGGAATTCGTTCCGGTGATCCTCTCGGATGGCATCGTGTTCTaGCTGCCAGGTGGGATAAGA +
Preference number: 5 (lower is better)
Translates to: RRSGESNGGVEFVPVILSDGIVF*LPGGIR
Trigger: TCTTATCCCACCTGGCAGCAAGAACACGATGCCATC...CGAGAGGATCACCGGAACGAATTCCACTCCCCCATTGGACTCACCAGACCTTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR CAA 90 bp TCAGAGAGTCGCATGCGCTTGACTGAAGGACTTTCCCTTTCGTCCGGCGAAGGTAGCGCACTGGCAGTGTaGAAGCCAGACAGAGATGAC +
Preference number: 5 (lower is better)
Translates to: SESRMRLTEGLSLSSGEGSALAV*KPDRDD
Trigger: GTCATCTCTGTCTGGCTTCAACACTGCCAGTGCGCT...ACCTTCGCCGGACGAAAGGGAAAGTCCTTCAGTCAAGCGCATGCGACTCTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR CAA 90 bp ACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGGTGGCGCGTGGTGTGTaGTGGGTATCTCGAAGGGGT +
Preference number: 5 (lower is better)
Translates to: TPMICLQVCERAWMLGDRVARGV*WVSRRG
Trigger: ACCCCTTCGAGATACCCACAACACACCACGCGCCAC...CCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp CTTCCTCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTAACTGTGGCGCGTGGTGTGTaGTGGGTATCTCGAAGGGGT +
Preference number: 5 (lower is better)
Translates to: LPLQHPGFHLVLLQNSVTVARGV*WVSRRG
Trigger: ACCCCTTCGAGATACCCACAACACACCACGCGCCAC...AGTTACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CAA 90 bp CATGTTGCCCATCCTTCAGAGAGTCGCATGCGCTTGACTGAAGGACTTTCCCTTGTGGCGCGTGGTGTGTaGTGGGTATCTCGAAGGGGT +
Preference number: 5 (lower is better)
Translates to: HVAHPSESRMRLTEGLSLVARGV*WVSRRG
Trigger: ACCCCTTCGAGATACCCACAACACACCACGCGCCAC...AAGGGAAAGTCCTTCAGTCAAGCGCATGCGACTCTCTGAAGGATGGGCAACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS CCA 90 bp ATGTTATGTAGGTGCTGCTGCTGCCAGCCAGTTACAGAGCCGAGGTaGAGCGCACTGGCAGTGTTGAAGCCAGACAGAGATGACAGATCT +
Preference number: 5 (lower is better)
Translates to: MLCRCCCCQPVTEPR*SALAVLKPDRDDRS
Trigger: AGATCTGTCATCTCTGTCTGGCTTCAACACTGCCAGTGCGCTCCACCTCGGCTCTGTAACTGGCTGGCAGCAGCAGCACCTACATAACAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197145.2
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000198217.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199210.5
ENSMUST00000199432.5
ENSMUST00000199450.5
ENSMUST00000200138.5
CDS-3UTR CAA 90 bp GGCTTCTGCCACCCAGCGGCAGCCTTTTACAGTGAGAAACATGTATGTAGCAACCCACAATGTCTGAGTTaGTCCGGCTCTCGTGCGGCT +
Preference number: 5 (lower is better)
Translates to: GFCHPAAAFYSEKHVCSNPQCLS*SGSRAA
Trigger: AGCCGCACGAGAGCCGGACAAACTCAGACATTGTGG...GTTGCTACATACATGTTTCTCACTGTAAAAGGCTGCCGCTGGGTGGCAGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR CAA 90 bp CTTCCTCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTAACTCCACAATGTCTGAGTTaGTCCGGCTCTCGTGCGGCT +
Preference number: 5 (lower is better)
Translates to: LPLQHPGFHLVLLQNSVTPQCLS*SGSRAA
Trigger: AGCCGCACGAGAGCCGGACAAACTCAGACATTGTGG...AGTTACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CAA 90 bp CCGGTGATCCTCTCGGTCGCTCCCATCGTAGGAACTGCTACAGCTGCTCAAGCTCTGTGTTACCTGCACTaGGAGGTCTATGTGTTACAC +
Preference number: 5 (lower is better)
Translates to: PVILSVAPIVGTATAAQALCYLH*EVYVLH
Trigger: GTGTAACACATAGACCTCCAAGTGCAGGTAACACAG...AGCTTGAGCAGCTGTAGCAGTTCCTACGATGGGAGCGACCGAGAGGATCACCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200138.5
CDS-3UTR CAA 90 bp TTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGGTGGCGCGTGGTGTGTaGTGGGTATCTCGAAGGGGT +
Preference number: 5 (lower is better)
Translates to: LNECHTPMICLQVCERAWVARGV*WVSRRG
Trigger: ACCCCTTCGAGATACCCACAACACACCACGCGCCAC...CCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp TCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTAACTTATCCGTGGCGCGTGGTGTGTaGTGGGTATCTCGAAGGGGT +
Preference number: 5 (lower is better)
Translates to: SPAPRLSPCSPPELCNLSVARGV*WVSRRG
Trigger: ACCCCTTCGAGATACCCACAACACACCACGCGCCAC...GGATAAGTTACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS GCA 90 bp GCACTTGGAGGTCTATGTGTTACACCAGGAGACATACTATTCCTCTaGAGAGACGGGTGGGCCAGTGGCAGAAGATTGGGGTTTCCCAGT +
Preference number: 5 (lower is better)
Translates to: ALGGLCVTPGDILFL*RDGWASGRRLGFPS
Trigger: ACTGGGAAACCCCAATCTTCTGCCACTGGCCCACCCGTCTCTGCAGAGGAATAGTATGTCTCCTGGTGTAACACATAGACCTCCAAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000195984.5
ENSMUST00000196730.5
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000197938.5
ENSMUST00000198199.5
ENSMUST00000198217.5
ENSMUST00000198360.2
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199167.5
ENSMUST00000199210.5
ENSMUST00000199432.5
ENSMUST00000199450.5
ENSMUST00000200138.5
CDS CCA 90 bp CTATGTGTTACACCAGGAGACATACTATTCCTCTGCAGAGACGGGTaGGCCAGTGGCAGAAGATTGGGGTTTCCCAGTGTGCTGACAGGA +
Preference number: 5 (lower is better)
Translates to: LCVTPGDILFLCRDG*ASGRRLGFPSVLTG
Trigger: TCCTGTCAGCACACTGGGAAACCCCAATCTTCTGCCACTGGCCCACCCGTCTCTGCAGAGGAATAGTATGTCTCCTGGTGTAACACATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000195984.5
ENSMUST00000196730.5
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000197938.5
ENSMUST00000198199.5
ENSMUST00000198217.5
ENSMUST00000198360.2
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199167.5
ENSMUST00000199210.5
ENSMUST00000199432.5
ENSMUST00000199450.5
ENSMUST00000200138.5
CDS-3UTR CAA 90 bp GGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCTGACAACATTGTTCCACAATGTCTGAGTTaGTCCGGCTCTCGTGCGGCT +
Preference number: 5 (lower is better)
Translates to: GVLTHQAVQQSYTADNIVPQCLS*SGSRAA
Trigger: AGCCGCACGAGAGCCGGACAAACTCAGACATTGTGG...AACAATGTTGTCAGCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CAA 90 bp TTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGCCACAATGTCTGAGTTaGTCCGGCTCTCGTGCGGCT +
Preference number: 5 (lower is better)
Translates to: LNECHTPMICLQVCERAWPQCLS*SGSRAA
Trigger: AGCCGCACGAGAGCCGGACAAACTCAGACATTGTGG...CCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp TCTGGTGAGTCCAATGGGGGAGTGGAATTCGTTCCGGTGATCCTCTCGGTCGCTCTGTGTTACCTGCACTaGGAGGTCTATGTGTTACAC +
Preference number: 5 (lower is better)
Translates to: SGESNGGVEFVPVILSVALCYLH*EVYVLH
Trigger: GTGTAACACATAGACCTCCAAGTGCAGGTAACACAG...AGCGACCGAGAGGATCACCGGAACGAATTCCACTCCCCCATTGGACTCACCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR CAA 90 bp ACAGGCGTGTTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACGATGGCATCGTGTTCTaGCTGCCAGGTGGGATAAGA +
Preference number: 5 (lower is better)
Translates to: TGVFLQLPVVTTCRVCPNDGIVF*LPGGIR
Trigger: TCTTATCCCACCTGGCAGCAAGAACACGATGCCATC...GTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAACACGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp CAGAACTCTGTAACTTATCCATCAAGTAAAGCAGGTCGGTCGCCCCCAGGACCCGATGGCATCGTGTTCTaGCTGCCAGGTGGGATAAGA +
Preference number: 5 (lower is better)
Translates to: QNSVTYPSSKAGRSPPGPDGIVF*LPGGIR
Trigger: TCTTATCCCACCTGGCAGCAAGAACACGATGCCATC...GGGTCCTGGGGGCGACCGACCTGCTTTACTTGATGGATAAGTTACAGAGTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CAA 90 bp GAAGTGACATTTGGGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCAGCGCACTGGCAGTGTaGAAGCCAGACAGAGATGAC +
Preference number: 5 (lower is better)
Translates to: EVTFGGPDTPGCSTVLYCSALAV*KPDRDD
Trigger: GTCATCTCTGTCTGGCTTCAACACTGCCAGTGCGCT...GCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCCCAAATGTCACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CAA 90 bp CCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTGTGGCGCGTGGTGTGTaGTGGGTATCTCGAAGGGGT +
Preference number: 5 (lower is better)
Translates to: PTITGSHHLPGLSKPLYIVARGV*WVSRRG
Trigger: ACCCCTTCGAGATACCCACAACACACCACGCGCCAC...AATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp CAGAACTCTGTAACTTATCCATCAAGTAAAGCAGGTCGGTCGCCCCCAGGACCCGAGAGTCGCATGCGCTaGACTGAAGGACTTTCCCTT +
Preference number: 5 (lower is better)
Translates to: QNSVTYPSSKAGRSPPGPESRMR*TEGLSL
Trigger: AAGGGAAAGTCCTTCAGTCAAGCGCATGCGACTCTC...GGGTCCTGGGGGCGACCGACCTGCTTTACTTGATGGATAAGTTACAGAGTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CAA 90 bp ACAGGCGTGTTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACGGGCTGTCACAGCCATaGAGGCCCTTCTTTCTCAAT +
Preference number: 5 (lower is better)
Translates to: TGVFLQLPVVTTCRVCPNGLSQP*RPFFLN
Trigger: ATTGAGAAAGAAGGGCCTCAATGGCTGTGACAGCCC...GTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAACACGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS TCA 90 bp AGAGCCGAGGTGGAGCGCACTGGCAGTGTTGAAGCCAGACAGAGATaGCAGATCTGCGCTACTCAGAGAGTACTCAGTACCATATGTTGT +
Preference number: 5 (lower is better)
Translates to: RAEVERTGSVEARQR*QICATQRVLSTICC
Trigger: ACAACATATGGTACTGAGTACTCTCTGAGTAGCGCAGATCTGTCATCTCTGTCTGGCTTCAACACTGCCAGTGCGCTCCACCTCGGCTCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197145.2
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000198217.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199210.5
ENSMUST00000199432.5
ENSMUST00000199450.5
ENSMUST00000200138.5
CDS TCA 90 bp GTTAATTTTCCTGTACTTGTCCTCAGACTCAGGGCTGTGACCTACTaGATCGTCTGCATCGGGATCTGGGCTGTCACAGCCATTGAGGCC +
Preference number: 5 (lower is better)
Translates to: VNFPVLVLRLRAVTY*IVCIGIWAVTAIEA
Trigger: GGCCTCAATGGCTGTGACAGCCCAGATCCCGATGCAGACGATTCAGTAGGTCACAGCCCTGAGTCTGAGGACAAGTACAGGAAAATTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000195904.5
ENSMUST00000195984.5
ENSMUST00000196493.5
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198064.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
ENSMUST00000200394.5
CDS CCA 90 bp TGTGCTGACAGGATTGCTGTACACCAAACTGTTATGGCTGGACACTaGGATGGTAACTGGCATCTCAAAGCTGGGAGGTGGAACAGCAGG +
Preference number: 5 (lower is better)
Translates to: CADRIAVHQTVMAGH*DGNWHLKAGRWNSR
Trigger: CCTGCTGTTCCACCTCCCAGCTTTGAGATGCCAGTTACCATCCCAGTGTCCAGCCATAACAGTTTGGTGTACAGCAATCCTGTCAGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000196730.5
ENSMUST00000197938.5
ENSMUST00000198199.5
ENSMUST00000199167.5
ENSMUST00000200138.5
CDS CCA 90 bp GGGTTTCCCAGTGTGCTGACAGGATTGCTGTACACCAAACTGTTATaGCTGGACACTGGGATGGTAACTGGCATCTCAAAGCTGGGAGGT +
Preference number: 5 (lower is better)
Translates to: GFPSVLTGLLYTKLL*LDTGMVTGISKLGG
Trigger: ACCTCCCAGCTTTGAGATGCCAGTTACCATCCCAGTGTCCAGCCATAACAGTTTGGTGTACAGCAATCCTGTCAGCACACTGGGAAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000195904.5
ENSMUST00000195984.5
ENSMUST00000196730.5
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000197938.5
ENSMUST00000198199.5
ENSMUST00000198217.5
ENSMUST00000198360.2
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199167.5
ENSMUST00000199210.5
ENSMUST00000199432.5
ENSMUST00000199450.5
ENSMUST00000200138.5
CDS CCA 90 bp GGATGTCAGATCTCCGCCCATCAGACCGCCTGTGTTACCTGCACTTaGAGGTCTATGTGTTACACCAGGAGACATACTATTCCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: GCQISAHQTACVTCT*RSMCYTRRHTIPLQ
Trigger: CTGCAGAGGAATAGTATGTCTCCTGGTGTAACACATAGACCTCCAAGTGCAGGTAACACAGGCGGTCTGATGGGCGGAGATCTGACATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000196730.5
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000197938.5
ENSMUST00000198199.5
ENSMUST00000198217.5
ENSMUST00000198360.2
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199167.5
ENSMUST00000199210.5
ENSMUST00000199432.5
ENSMUST00000199450.5
ENSMUST00000200138.5
CDS CCA 90 bp TGTGCTGACAGGATTGCTGTACACCAAACTGTTATGGCTGGACACTaGGATGGTAACTGGCATCTCAAAGCTGGGAGGTGGAACAGCCTC +
Preference number: 5 (lower is better)
Translates to: CADRIAVHQTVMAGH*DGNWHLKAGRWNSL
Trigger: GAGGCTGTTCCACCTCCCAGCTTTGAGATGCCAGTTACCATCCCAGTGTCCAGCCATAACAGTTTGGTGTACAGCAATCCTGTCAGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198217.5
ENSMUST00000199210.5
CDS-3UTR CAA 90 bp CCGGTGATCCTCTCGGTCGCTCCCATCGTAGGAACTGCTACAGCTGCTCAAGCTATAGGGGGAGGAGATTaGGCTTGTATATTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: PVILSVAPIVGTATAAQAIGGGD*ACIFLF
Trigger: GAACAAGAATATACAAGCCAAATCTCCTCCCCCTAT...AGCTTGAGCAGCTGTAGCAGTTCCTACGATGGGAGCGACCGAGAGGATCACCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000200138.5
CDS-3UTR CAA 90 bp ACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGGATGGCATCGTGTTCTaGCTGCCAGGTGGGATAAGA +
Preference number: 5 (lower is better)
Translates to: TPMICLQVCERAWMLGDRDGIVF*LPGGIR
Trigger: TCTTATCCCACCTGGCAGCAAGAACACGATGCCATC...CCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp TTTCCTTCCTCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTGATGGCATCGTGTTCTaGCTGCCAGGTGGGATAAGA +
Preference number: 5 (lower is better)
Translates to: FPSSPAPRLSPCSPPELCDGIVF*LPGGIR
Trigger: TCTTATCCCACCTGGCAGCAAGAACACGATGCCATC...ACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGAGGAAGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CAA 90 bp CATGTTGCCCATCCTTCAGAGAGTCGCATGCGCTTGACTGAAGGACTTTCCCTTGATGGCATCGTGTTCTaGCTGCCAGGTGGGATAAGA +
Preference number: 5 (lower is better)
Translates to: HVAHPSESRMRLTEGLSLDGIVF*LPGGIR
Trigger: TCTTATCCCACCTGGCAGCAAGAACACGATGCCATC...AAGGGAAAGTCCTTCAGTCAAGCGCATGCGACTCTCTGAAGGATGGGCAACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR CAA 90 bp GGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCTGACAACATTGTTAGCGCACTGGCAGTGTaGAAGCCAGACAGAGATGAC +
Preference number: 5 (lower is better)
Translates to: GVLTHQAVQQSYTADNIVSALAV*KPDRDD
Trigger: GTCATCTCTGTCTGGCTTCAACACTGCCAGTGCGCT...AACAATGTTGTCAGCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CAA 90 bp CTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTAGCGCACTGGCAGTGTaGAAGCCAGACAGAGATGAC +
Preference number: 5 (lower is better)
Translates to: LQVCERAWMLGDRRVPTISALAV*KPDRDD
Trigger: GTCATCTCTGTCTGGCTTCAACACTGCCAGTGCGCT...AATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp GCACGTCCTACACGTGACCTGGCAGGGCTAATGTTACTGCATTCTTTGTTCTGTAGCGCACTGGCAGTGTaGAAGCCAGACAGAGATGAC +
Preference number: 5 (lower is better)
Translates to: ARPTRDLAGLMLLHSLFCSALAV*KPDRDD
Trigger: GTCATCTCTGTCTGGCTTCAACACTGCCAGTGCGCT...ACAGAACAAAGAATGCAGTAACATTAGCCCTGCCAGGTCACGTGTAGGACGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR CAA 90 bp TTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGAGCGCACTGGCAGTGTaGAAGCCAGACAGAGATGAC +
Preference number: 5 (lower is better)
Translates to: LNECHTPMICLQVCERAWSALAV*KPDRDD
Trigger: GTCATCTCTGTCTGGCTTCAACACTGCCAGTGCGCT...CCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp ATCCCCCAGAGCTCTGCCCTAGACTTCTCAATACAAAGAACTTGGTGTGATCAAGTGGCGCGTGGTGTGTaGTGGGTATCTCGAAGGGGT +
Preference number: 5 (lower is better)
Translates to: IPQSSALDFSIQRTWCDQVARGV*WVSRRG
Trigger: ACCCCTTCGAGATACCCACAACACACCACGCGCCAC...TTGATCACACCAAGTTCTTTGTATTGAGAAGTCTAGGGCAGAGCTCTGGGGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
CDS-3UTR CAA 90 bp ACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGGGGCTGTCACAGCCATaGAGGCCCTTCTTTCTCAAT +
Preference number: 5 (lower is better)
Translates to: TPMICLQVCERAWMLGDRGLSQP*RPFFLN
Trigger: ATTGAGAAAGAAGGGCCTCAATGGCTGTGACAGCCC...CCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS TCA 90 bp GACCTACTGAATCGTCTGCATCGGGATCTGGGCTGTCACAGCCATTaGGGCCCTTCTTTCTCAATGTCTCCACAATGTCTGAGTTTGTCC +
Preference number: 5 (lower is better)
Translates to: DLLNRLHRDLGCHSH*GPSFSMSPQCLSLS
Trigger: GGACAAACTCAGACATTGTGGAGACATTGAGAAAGAAGGGCCTCAATGGCTGTGACAGCCCAGATCCCGATGCAGACGATTCAGTAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000195904.5
ENSMUST00000195984.5
ENSMUST00000196493.5
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198064.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
ENSMUST00000200394.5
CDS CCA 90 bp TGTGCTGACAGGATTGCTGTACACCAAACTGTTATGGCTGGACACTaGGATGGTAACTGGCATCTCAAAGCTGGGAGGTGGAACAGCACA +
Preference number: 5 (lower is better)
Translates to: CADRIAVHQTVMAGH*DGNWHLKAGRWNST
Trigger: TGTGCTGTTCCACCTCCCAGCTTTGAGATGCCAGTTACCATCCCAGTGTCCAGCCATAACAGTTTGGTGTACAGCAATCCTGTCAGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000195904.5
ENSMUST00000195984.5
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp CCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTCTATATGCCACAATGTCTGAGTTaGTCCGGCTCTCGTGCGGCT +
Preference number: 5 (lower is better)
Translates to: PVVTTCRVCPNLYTFFYMPQCLS*SGSRAA
Trigger: AGCCGCACGAGAGCCGGACAAACTCAGACATTGTGG...CATATAGAAAAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp CTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTCCACAATGTCTGAGTTaGTCCGGCTCTCGTGCGGCT +
Preference number: 5 (lower is better)
Translates to: LQLPVVTTCRVCPNLYTFPQCLS*SGSRAA
Trigger: AGCCGCACGAGAGCCGGACAAACTCAGACATTGTGG...AAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp ATCCTTTTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTCCACAATGTCTGAGTTaGTCCGGCTCTCGTGCGGCT +
Preference number: 5 (lower is better)
Translates to: ILLNECHTPMICLQVCERPQCLS*SGSRAA
Trigger: AGCCGCACGAGAGCCGGACAAACTCAGACATTGTGG...ACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAAAAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp TCTGGTGAGTCCAATGGGGGAGTGGAATTCGTTCCGGTGATCCTCTCGGTCGCTTTGGCTTGTATATTCTaGTTCAGGTTACCAGGTGAG +
Preference number: 5 (lower is better)
Translates to: SGESNGGVEFVPVILSVALACIF*FRLPGE
Trigger: CTCACCTGGTAACCTGAACAAGAATATACAAGCCAA...AGCGACCGAGAGGATCACCGGAACGAATTCCACTCCCCCATTGGACTCACCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR CAA 90 bp CGAAGGTCTGGTGAGTCCAATGGGGGAGTGGAATTCGTTCCGGTGATCCTCTCGGGGAGGAGATTTGGCTaGTATATTCTTGTTCAGGTT +
Preference number: 5 (lower is better)
Translates to: RRSGESNGGVEFVPVILSGRRFG*YILVQV
Trigger: AACCTGAACAAGAATATACAAGCCAAATCTCCTCCC...CGAGAGGATCACCGGAACGAATTCCACTCCCCCATTGGACTCACCAGACCTTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR CAA 90 bp CTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTGATGGCATCGTGTTCTaGCTGCCAGGTGGGATAAGA +
Preference number: 5 (lower is better)
Translates to: LQVCERAWMLGDRRVPTIDGIVF*LPGGIR
Trigger: TCTTATCCCACCTGGCAGCAAGAACACGATGCCATC...AATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp TGGGGGAGTGGAATTCGTTCCGGTGATCCTCTCGGTCGCTCCCATCGTAGGAACACTCAGTACCATATGTaGTTGAAATGGCTGATGGAT +
Preference number: 5 (lower is better)
Translates to: WGSGIRSGDPLGRSHRRNTQYHM*LKWLMD
Trigger: ATCCATCAGCCATTTCAACAACATATGGTACTGAGT...GTTCCTACGATGGGAGCGACCGAGAGGATCACCGGAACGAATTCCACTCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR CAA 90 bp CGGCGAAGGTCTGGTGAGTCCAATGGGGGAGTGGAATTCGTTCCGGTGATCCTCACTCAGTACCATATGTaGTTGAAATGGCTGATGGAT +
Preference number: 5 (lower is better)
Translates to: RRRSGESNGGVEFVPVILTQYHM*LKWLMD
Trigger: ATCCATCAGCCATTTCAACAACATATGGTACTGAGT...GAGGATCACCGGAACGAATTCCACTCCCCCATTGGACTCACCAGACCTTCGCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR CAA 90 bp CTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTGGGCTGTCACAGCCATaGAGGCCCTTCTTTCTCAAT +
Preference number: 5 (lower is better)
Translates to: LQVCERAWMLGDRRVPTIGLSQP*RPFFLN
Trigger: ATTGAGAAAGAAGGGCCTCAATGGCTGTGACAGCCC...AATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp TCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTAACTTATCCGGGCTGTCACAGCCATaGAGGCCCTTCTTTCTCAAT +
Preference number: 5 (lower is better)
Translates to: SPAPRLSPCSPPELCNLSGLSQP*RPFFLN
Trigger: ATTGAGAAAGAAGGGCCTCAATGGCTGTGACAGCCC...GGATAAGTTACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS TCA 90 bp TCAATGCTGAATCGTCTGCATCGGGATCTGGGCTGTCACAGCCATTaGGGCCCTTCTTTCTCAATGTCTCCACAATGTCTGAGTTTGTCC +
Preference number: 5 (lower is better)
Translates to: SMLNRLHRDLGCHSH*GPSFSMSPQCLSLS
Trigger: GGACAAACTCAGACATTGTGGAGACATTGAGAAAGAAGGGCCTCAATGGCTGTGACAGCCCAGATCCCGATGCAGACGATTCAGCATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163888.8
CDS-3UTR CAA 90 bp CAGAACTCTGTAACTTATCCATCAAGTAAAGCAGGTCGGTCGCCCCCAGGACCCAGCTTGTTGGTGCTGTaGAAGATGATCAGTGCAATC +
Preference number: 5 (lower is better)
Translates to: QNSVTYPSSKAGRSPPGPSLLVL*KMISAI
Trigger: GATTGCACTGATCATCTTCAACAGCACCAACAAGCT...GGGTCCTGGGGGCGACCGACCTGCTTTACTTGATGGATAAGTTACAGAGTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CAA 90 bp GAAGTGACATTTGGGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCCTGTGTTACCTGCACTaGGAGGTCTATGTGTTACAC +
Preference number: 5 (lower is better)
Translates to: EVTFGGPDTPGCSTVLYCLCYLH*EVYVLH
Trigger: GTGTAACACATAGACCTCCAAGTGCAGGTAACACAG...GCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCCCAAATGTCACTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CAA 90 bp ACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCTGTGTTACCTGCACTaGGAGGTCTATGTGTTACAC +
Preference number: 5 (lower is better)
Translates to: TPMICLQVCERAWMLGDRLCYLH*EVYVLH
Trigger: GTGTAACACATAGACCTCCAAGTGCAGGTAACACAG...CCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp TTTCCTTCCTCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTCTGTGTTACCTGCACTaGGAGGTCTATGTGTTACAC +
Preference number: 5 (lower is better)
Translates to: FPSSPAPRLSPCSPPELCLCYLH*EVYVLH
Trigger: GTGTAACACATAGACCTCCAAGTGCAGGTAACACAG...ACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGAGGAAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CAA 90 bp AGGACTTTCCCTTTCGTCCGGCGAAGGTCTGGTGAGTCCAATGGGGGAGTGGAACAGTACCATATGTTGTaGAAATGGCTGATGGATATC +
Preference number: 5 (lower is better)
Translates to: RTFPFVRRRSGESNGGVEQYHML*KWLMDI
Trigger: GATATCCATCAGCCATTTCAACAACATATGGTACTG...TTCCACTCCCCCATTGGACTCACCAGACCTTCGCCGGACGAAAGGGAAAGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR CAA 90 bp TCTGGTGAGTCCAATGGGGGAGTGGAATTCGTTCCGGTGATCCTCTCGGTCGCTCAGTACCATATGTTGTaGAAATGGCTGATGGATATC +
Preference number: 5 (lower is better)
Translates to: SGESNGGVEFVPVILSVAQYHML*KWLMDI
Trigger: GATATCCATCAGCCATTTCAACAACATATGGTACTG...AGCGACCGAGAGGATCACCGGAACGAATTCCACTCCCCCATTGGACTCACCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
ENSMUST00000200138.5
CDS-3UTR CAA 90 bp CCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTCTATATGAGCGCACTGGCAGTGTaGAAGCCAGACAGAGATGAC +
Preference number: 5 (lower is better)
Translates to: PVVTTCRVCPNLYTFFYMSALAV*KPDRDD
Trigger: GTCATCTCTGTCTGGCTTCAACACTGCCAGTGCGCT...CATATAGAAAAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp GTTAAGAAAAATATAGCCTCGTTAATAAGGTCTTTTGGCTTCTGCCACCCAGCGGTGGCGCGTGGTGTGTaGTGGGTATCTCGAAGGGGT +
Preference number: 5 (lower is better)
Translates to: VKKNIASLIRSFGFCHPAVARGV*WVSRRG
Trigger: ACCCCTTCGAGATACCCACAACACACCACGCGCCAC...CGCTGGGTGGCAGAAGCCAAAAGACCTTATTAACGAGGCTATATTTTTCTTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR CAA 90 bp CAGAACTCTGTAACTTATCCATCAAGTAAAGCAGGTCGGTCGCCCCCAGGACCCTTAATTTTCCTGTACTaGTCCTCAGACTCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: QNSVTYPSSKAGRSPPGPLIFLY*SSDSGL
Trigger: CAGCCCTGAGTCTGAGGACAAGTACAGGAAAATTAA...GGGTCCTGGGGGCGACCGACCTGCTTTACTTGATGGATAAGTTACAGAGTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CAA 90 bp AGGACTTTCCCTTTCGTCCGGCGAAGGTCTGGTGAGTCCAATGGGGGAGTGGAAGGAGTTATTTATCCTTaGATTCAACAGCAGATCCAC +
Preference number: 5 (lower is better)
Translates to: RTFPFVRRRSGESNGGVEGVIYP*IQQQIH
Trigger: GTGGATCTGCTGTTGAATCAAAGGATAAATAACTCC...TTCCACTCCCCCATTGGACTCACCAGACCTTCGCCGGACGAAAGGGAAAGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000197145.2
ENSMUST00000197722.5
CDS TCA 90 bp ATATCTTCGTTAATTTTCCTGTACTTGTCCTCAGACTCAGGGCTGTaGCCTACTGAATCGTCTGCATCGGGATCTGGGCTGTCACAGCCA +
Preference number: 5 (lower is better)
Translates to: ISSLIFLYLSSDSGL*PTESSASGSGLSQP
Trigger: TGGCTGTGACAGCCCAGATCCCGATGCAGACGATTCAGTAGGTCACAGCCCTGAGTCTGAGGACAAGTACAGGAAAATTAACGAAGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000195904.5
ENSMUST00000195984.5
ENSMUST00000196493.5
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198064.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
ENSMUST00000200394.5
CDS CCA 90 bp ATTGCTGTACACCAAACTGTTATGGCTGGACACTGGGATGGTAACTaGCATCTCAAAGCTGGGAGGTGGAACAGCACACAATCTTTGCCT +
Preference number: 5 (lower is better)
Translates to: IAVHQTVMAGHWDGN*HLKAGRWNSTQSLP
Trigger: AGGCAAAGATTGTGTGCTGTTCCACCTCCCAGCTTTGAGATGCCAGTTACCATCCCAGTGTCCAGCCATAACAGTTTGGTGTACAGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000195904.5
ENSMUST00000195984.5
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
ENSMUST00000200394.5
CDS-3UTR CAA 90 bp TTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGCTGTGTTACCTGCACTaGGAGGTCTATGTGTTACAC +
Preference number: 5 (lower is better)
Translates to: LNECHTPMICLQVCERAWLCYLH*EVYVLH
Trigger: GTGTAACACATAGACCTCCAAGTGCAGGTAACACAG...CCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp GGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCTGACAACATTGTTCTGTGTTACCTGCACTaGGAGGTCTATGTGTTACAC +
Preference number: 5 (lower is better)
Translates to: GVLTHQAVQQSYTADNIVLCYLH*EVYVLH
Trigger: GTGTAACACATAGACCTCCAAGTGCAGGTAACACAG...AACAATGTTGTCAGCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CAA 90 bp CAGAACTCTGTAACTTATCCATCAAGTAAAGCAGGTCGGTCGCCCCCAGGACCCTTGGCTTGTATATTCTaGTTCAGGTTACCAGGTGAG +
Preference number: 5 (lower is better)
Translates to: QNSVTYPSSKAGRSPPGPLACIF*FRLPGE
Trigger: CTCACCTGGTAACCTGAACAAGAATATACAAGCCAA...GGGTCCTGGGGGCGACCGACCTGCTTTACTTGATGGATAAGTTACAGAGTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CAA 90 bp ACAGGCGTGTTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACATAGGGGGAGGAGATTaGGCTTGTATATTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: TGVFLQLPVVTTCRVCPNIGGGD*ACIFLF
Trigger: GAACAAGAATATACAAGCCAAATCTCCTCCCCCTAT...GTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAACACGCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp CCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTCTATATGGATGGCATCGTGTTCTaGCTGCCAGGTGGGATAAGA +
Preference number: 5 (lower is better)
Translates to: PVVTTCRVCPNLYTFFYMDGIVF*LPGGIR
Trigger: TCTTATCCCACCTGGCAGCAAGAACACGATGCCATC...CATATAGAAAAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp AGCTTGCAGGACTTAGGCTCCAACACAGCTTCTTACTCTGGGCATATTTCTAAAAGCGCACTGGCAGTGTaGAAGCCAGACAGAGATGAC +
Preference number: 5 (lower is better)
Translates to: SLQDLGSNTASYSGHISKSALAV*KPDRDD
Trigger: GTCATCTCTGTCTGGCTTCAACACTGCCAGTGCGCT...TTTAGAAATATGCCCAGAGTAAGAAGCTGTGTTGGAGCCTAAGTCCTGCAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CAA 90 bp AGAGTACACTGCTGCATTCAAACCACAACTAGAATCCAACACTTAGCGAACCTCAGCGCACTGGCAGTGTaGAAGCCAGACAGAGATGAC +
Preference number: 5 (lower is better)
Translates to: RVHCCIQTTTRIQHLANLSALAV*KPDRDD
Trigger: GTCATCTCTGTCTGGCTTCAACACTGCCAGTGCGCT...GAGGTTCGCTAAGTGTTGGATTCTAGTTGTGGTTTGAATGCAGCAGTGTACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
CDS-3UTR CAA 90 bp CCCTTTCCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCGTGGCGCGTGGTGTGTaGTGGGTATCTCGAAGGGGT +
Preference number: 5 (lower is better)
Translates to: PFPFLSFLLFSFKVGMVLVARGV*WVSRRG
Trigger: ACCCCTTCGAGATACCCACAACACACCACGCGCCAC...GAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGGAAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp ATCCTTTTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGAGAGTCGCATGCGCTaGACTGAAGGACTTTCCCTT +
Preference number: 5 (lower is better)
Translates to: ILLNECHTPMICLQVCERESRMR*TEGLSL
Trigger: AAGGGAAAGTCCTTCAGTCAAGCGCATGCGACTCTC...ACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAAAAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp CTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTGGGCTGTCACAGCCATaGAGGCCCTTCTTTCTCAAT +
Preference number: 5 (lower is better)
Translates to: LQLPVVTTCRVCPNLYTFGLSQP*RPFFLN
Trigger: ATTGAGAAAGAAGGGCCTCAATGGCTGTGACAGCCC...AAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp ATCCTTTTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGGGCTGTCACAGCCATaGAGGCCCTTCTTTCTCAAT +
Preference number: 5 (lower is better)
Translates to: ILLNECHTPMICLQVCERGLSQP*RPFFLN
Trigger: ATTGAGAAAGAAGGGCCTCAATGGCTGTGACAGCCC...ACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAAAAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp CTTCCTCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTAACTTTAATTTTCCTGTACTaGTCCTCAGACTCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: LPLQHPGFHLVLLQNSVTLIFLY*SSDSGL
Trigger: CAGCCCTGAGTCTGAGGACAAGTACAGGAAAATTAA...AGTTACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CAA 90 bp CATGTTGCCCATCCTTCAGAGAGTCGCATGCGCTTGACTGAAGGACTTTCCCTTTTAATTTTCCTGTACTaGTCCTCAGACTCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: HVAHPSESRMRLTEGLSLLIFLY*SSDSGL
Trigger: CAGCCCTGAGTCTGAGGACAAGTACAGGAAAATTAA...AAGGGAAAGTCCTTCAGTCAAGCGCATGCGACTCTCTGAAGGATGGGCAACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197722.5
CDS-3UTR CAA 90 bp GGCTTCTGCCACCCAGCGGCAGCCTTTTACAGTGAGAAACATGTATGTAGCAACTTAATTTTCCTGTACTaGTCCTCAGACTCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: GFCHPAAAFYSEKHVCSNLIFLY*SSDSGL
Trigger: CAGCCCTGAGTCTGAGGACAAGTACAGGAAAATTAA...GTTGCTACATACATGTTTCTCACTGTAAAAGGCTGCCGCTGGGTGGCAGAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS TCA 90 bp GTTATTTATCCTTTGATTCAACAGCAGATCCACATCCTCAGACACTaGTGGCATCGTGTTCTTGCTGCCAGGTGGGATAAGAACGCGGAG +
Preference number: 5 (lower is better)
Translates to: VIYPLIQQQIHILRH*WHRVLAARWDKNAE
Trigger: CTCCGCGTTCTTATCCCACCTGGCAGCAAGAACACGATGCCATCAGTGTCTGAGGATGTGGATCTGCTGTTGAATCAAAGGATAAATAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185052.6
ENSMUST00000197145.2
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199210.5
CDS-3UTR CAA 90 bp GCACGTCCTACACGTGACCTGGCAGGGCTAATGTTACTGCATTCTTTGTTCTGTAGCTTGTTGGTGCTGTaGAAGATGATCAGTGCAATC +
Preference number: 5 (lower is better)
Translates to: ARPTRDLAGLMLLHSLFCSLLVL*KMISAI
Trigger: GATTGCACTGATCATCTTCAACAGCACCAACAAGCT...ACAGAACAAAGAATGCAGTAACATTAGCCCTGCCAGGTCACGTGTAGGACGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR CAA 90 bp ACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGTTGGCTTGTATATTCTaGTTCAGGTTACCAGGTGAG +
Preference number: 5 (lower is better)
Translates to: TPMICLQVCERAWMLGDRLACIF*FRLPGE
Trigger: CTCACCTGGTAACCTGAACAAGAATATACAAGCCAA...CCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp GGCTTCTGCCACCCAGCGGCAGCCTTTTACAGTGAGAAACATGTATGTAGCAACTTGGCTTGTATATTCTaGTTCAGGTTACCAGGTGAG +
Preference number: 5 (lower is better)
Translates to: GFCHPAAAFYSEKHVCSNLACIF*FRLPGE
Trigger: CTCACCTGGTAACCTGAACAAGAATATACAAGCCAA...GTTGCTACATACATGTTTCTCACTGTAAAAGGCTGCCGCTGGGTGGCAGAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR CAA 90 bp CTTCCTCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTAACTGGGAGGAGATTTGGCTaGTATATTCTTGTTCAGGTT +
Preference number: 5 (lower is better)
Translates to: LPLQHPGFHLVLLQNSVTGRRFG*YILVQV
Trigger: AACCTGAACAAGAATATACAAGCCAAATCTCCTCCC...AGTTACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGAGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CAA 90 bp ACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGGGGAGGAGATTTGGCTaGTATATTCTTGTTCAGGTT +
Preference number: 5 (lower is better)
Translates to: TPMICLQVCERAWMLGDRGRRFG*YILVQV
Trigger: AACCTGAACAAGAATATACAAGCCAAATCTCCTCCC...CCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp TTTCCTTCCTCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTATAGGGGGAGGAGATTaGGCTTGTATATTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: FPSSPAPRLSPCSPPELCIGGGD*ACIFLF
Trigger: GAACAAGAATATACAAGCCAAATCTCCTCCCCCTAT...ACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGAGGAAGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CAA 90 bp AGCTTGCAGGACTTAGGCTCCAACACAGCTTCTTACTCTGGGCATATTTCTAAAGATGGCATCGTGTTCTaGCTGCCAGGTGGGATAAGA +
Preference number: 5 (lower is better)
Translates to: SLQDLGSNTASYSGHISKDGIVF*LPGGIR
Trigger: TCTTATCCCACCTGGCAGCAAGAACACGATGCCATC...TTTAGAAATATGCCCAGAGTAAGAAGCTGTGTTGGAGCCTAAGTCCTGCAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CAA 90 bp CCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCTCTGAAGTGGCGCGTGGTGTGTaGTGGGTATCTCGAAGGGGT +
Preference number: 5 (lower is better)
Translates to: PFLSFLLFSFKVGMVLSEVARGV*WVSRRG
Trigger: ACCCCTTCGAGATACCCACAACACACCACGCGCCAC...TTCAGAGAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS CCA 90 bp ATTGCTGTACACCAAACTGTTATGGCTGGACACTGGGATGGTAACTaGCATCTCAAAGCTGGGAGGTGGAACAGCAGGAATTTTATGACT +
Preference number: 5 (lower is better)
Translates to: IAVHQTVMAGHWDGN*HLKAGRWNSRNFMT
Trigger: AGTCATAAAATTCCTGCTGTTCCACCTCCCAGCTTTGAGATGCCAGTTACCATCCCAGTGTCCAGCCATAACAGTTTGGTGTACAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000196730.5
ENSMUST00000197938.5
ENSMUST00000198199.5
ENSMUST00000199167.5
CDS-3UTR CAA 90 bp CCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTAGCTTGTTGGTGCTGTaGAAGATGATCAGTGCAATC +
Preference number: 5 (lower is better)
Translates to: PTITGSHHLPGLSKPLYISLLVL*KMISAI
Trigger: GATTGCACTGATCATCTTCAACAGCACCAACAAGCT...AATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp CCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCTCTGAACCACAATGTCTGAGTTaGTCCGGCTCTCGTGCGGCT +
Preference number: 5 (lower is better)
Translates to: PFLSFLLFSFKVGMVLSEPQCLS*SGSRAA
Trigger: AGCCGCACGAGAGCCGGACAAACTCAGACATTGTGG...TTCAGAGAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp CCTTGGTGGGTTTTTACAGGACTGTTTAAAATATTAGCGAAGCTATTGAGGGAACCACAATGTCTGAGTTaGTCCGGCTCTCGTGCGGCT +
Preference number: 5 (lower is better)
Translates to: PWWVFTGLFKILAKLLREPQCLS*SGSRAA
Trigger: AGCCGCACGAGAGCCGGACAAACTCAGACATTGTGG...TTCCCTCAATAGCTTCGCTAATATTTTAAACAGTCCTGTAAAAACCCACCAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp ATCCTTTTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTCTGTGTTACCTGCACTaGGAGGTCTATGTGTTACAC +
Preference number: 5 (lower is better)
Translates to: ILLNECHTPMICLQVCERLCYLH*EVYVLH
Trigger: GTGTAACACATAGACCTCCAAGTGCAGGTAACACAG...ACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAAAAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp CTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTCTGTGTTACCTGCACTaGGAGGTCTATGTGTTACAC +
Preference number: 5 (lower is better)
Translates to: LQLPVVTTCRVCPNLYTFLCYLH*EVYVLH
Trigger: GTGTAACACATAGACCTCCAAGTGCAGGTAACACAG...AAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp CAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTACCTTGGCTTGTATATTCTaGTTCAGGTTACCAGGTGAG +
Preference number: 5 (lower is better)
Translates to: QVCERAWMLGDRRVPTITLACIF*FRLPGE
Trigger: CTCACCTGGTAACCTGAACAAGAATATACAAGCCAA...GGTAATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp TTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGTTGGCTTGTATATTCTaGTTCAGGTTACCAGGTGAG +
Preference number: 5 (lower is better)
Translates to: LNECHTPMICLQVCERAWLACIF*FRLPGE
Trigger: CTCACCTGGTAACCTGAACAAGAATATACAAGCCAA...CCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp GCACGTCCTACACGTGACCTGGCAGGGCTAATGTTACTGCATTCTTTGTTCTGTGGGAGGAGATTTGGCTaGTATATTCTTGTTCAGGTT +
Preference number: 5 (lower is better)
Translates to: ARPTRDLAGLMLLHSLFCGRRFG*YILVQV
Trigger: AACCTGAACAAGAATATACAAGCCAAATCTCCTCCC...ACAGAACAAAGAATGCAGTAACATTAGCCCTGCCAGGTCACGTGTAGGACGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR CAA 90 bp TTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGGGGAGGAGATTTGGCTaGTATATTCTTGTTCAGGTT +
Preference number: 5 (lower is better)
Translates to: LNECHTPMICLQVCERAWGRRFG*YILVQV
Trigger: AACCTGAACAAGAATATACAAGCCAAATCTCCTCCC...CCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp CTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTATAGGGGGAGGAGATTaGGCTTGTATATTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: LQVCERAWMLGDRRVPTIIGGGD*ACIFLF
Trigger: GAACAAGAATATACAAGCCAAATCTCCTCCCCCTAT...AATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp ACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCAGTACCATATGTTGTaGAAATGGCTGATGGATATC +
Preference number: 5 (lower is better)
Translates to: TPMICLQVCERAWMLGDRQYHML*KWLMDI
Trigger: GATATCCATCAGCCATTTCAACAACATATGGTACTG...CCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp ACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGACTCAGTACCATATGTaGTTGAAATGGCTGATGGAT +
Preference number: 5 (lower is better)
Translates to: TPMICLQVCERAWMLGDRTQYHM*LKWLMD
Trigger: ATCCATCAGCCATTTCAACAACATATGGTACTGAGT...CCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp CCCTTTCCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCAGCGCACTGGCAGTGTaGAAGCCAGACAGAGATGAC +
Preference number: 5 (lower is better)
Translates to: PFPFLSFLLFSFKVGMVLSALAV*KPDRDD
Trigger: GTCATCTCTGTCTGGCTTCAACACTGCCAGTGCGCT...GAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGGAAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp CAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTACCAAGGCAGGGAGAGATTaGAACTCTGAGATAAATGAG +
Preference number: 5 (lower is better)
Translates to: QVCERAWMLGDRRVPTITKAGRD*NSEINE
Trigger: CTCATTTATCTCAGAGTTCAAATCTCTCCCTGCCTT...GGTAATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp GGCAGGGCTAATGTTACTGCATTCTTTGTTCTGTATGTCAGGATTAATGACAGGGGGCTGTCACAGCCATaGAGGCCCTTCTTTCTCAAT +
Preference number: 5 (lower is better)
Translates to: GRANVTAFFVLYVRINDRGLSQP*RPFFLN
Trigger: ATTGAGAAAGAAGGGCCTCAATGGCTGTGACAGCCC...CCTGTCATTAATCCTGACATACAGAACAAAGAATGCAGTAACATTAGCCCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR CAA 90 bp TTTCCTTCCTCTCCAGCACCCAGGCTTTCACCTTGTTCTCCTCCAGAACTCTGTGGAGTTATTTATCCTTaGATTCAACAGCAGATCCAC +
Preference number: 5 (lower is better)
Translates to: FPSSPAPRLSPCSPPELCGVIYP*IQQQIH
Trigger: GTGGATCTGCTGTTGAATCAAAGGATAAATAACTCC...ACAGAGTTCTGGAGGAGAACAAGGTGAAAGCCTGGGTGCTGGAGAGGAAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR CAA 90 bp GAAGTGACATTTGGGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCGGAGTTATTTATCCTTaGATTCAACAGCAGATCCAC +
Preference number: 5 (lower is better)
Translates to: EVTFGGPDTPGCSTVLYCGVIYP*IQQQIH
Trigger: GTGGATCTGCTGTTGAATCAAAGGATAAATAACTCC...GCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCCCAAATGTCACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR CAA 90 bp CTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTAGCTTGTTGGTGCTGTaGAAGATGATCAGTGCAATC +
Preference number: 5 (lower is better)
Translates to: LQLPVVTTCRVCPNLYTFSLLVL*KMISAI
Trigger: GATTGCACTGATCATCTTCAACAGCACCAACAAGCT...AAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp GGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCTGACAACATTGTTCCTTTGTTTTCTTTCTaGTTCAATGCCTCCACAATG +
Preference number: 5 (lower is better)
Translates to: GVLTHQAVQQSYTADNIVPLFSF*FNASTM
Trigger: CATTGTGGAGGCATTGAACAAGAAAGAAAACAAAGG...AACAATGTTGTCAGCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000005722.14
ENSMUST00000185052.6
CDS-3UTR CAA 90 bp TTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTGCTTGGCAGTACCATATGTTGTaGAAATGGCTGATGGATATC +
Preference number: 5 (lower is better)
Translates to: LNECHTPMICLQVCERAWQYHML*KWLMDI
Trigger: GATATCCATCAGCCATTTCAACAACATATGGTACTG...CCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp GGGGTCCTGACACACCAGGCTGTTCAACAGTCCTATACTGCTGACAACATTGTTACTCAGTACCATATGTaGTTGAAATGGCTGATGGAT +
Preference number: 5 (lower is better)
Translates to: GVLTHQAVQQSYTADNIVTQYHM*LKWLMD
Trigger: ATCCATCAGCCATTTCAACAACATATGGTACTGAGT...AACAATGTTGTCAGCAGTATAGGACTGTTGAACAGCCTGGTGTGTCAGGACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CAA 90 bp CTGCAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTACTCAGTACCATATGTaGTTGAAATGGCTGATGGAT +
Preference number: 5 (lower is better)
Translates to: LQVCERAWMLGDRRVPTITQYHM*LKWLMD
Trigger: ATCCATCAGCCATTTCAACAACATATGGTACTGAGT...AATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp CCTTGGTGGGTTTTTACAGGACTGTTTAAAATATTAGCGAAGCTATTGAGGGAAAGCGCACTGGCAGTGTaGAAGCCAGACAGAGATGAC +
Preference number: 5 (lower is better)
Translates to: PWWVFTGLFKILAKLLRESALAV*KPDRDD
Trigger: GTCATCTCTGTCTGGCTTCAACACTGCCAGTGCGCT...TTCCCTCAATAGCTTCGCTAATATTTTAAACAGTCCTGTAAAAACCCACCAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp AAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTATACAAAAAGTCCTTGAGAGTCGCATGCGCTaGACTGAAGGACTTTCCCTT +
Preference number: 5 (lower is better)
Translates to: KAWRSSWLRVVLSIQKVLESRMR*TEGLSL
Trigger: AAGGGAAAGTCCTTCAGTCAAGCGCATGCGACTCTC...AAGGACTTTTTGTATAGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp AAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTATACAAAAAGTCCTTGGGCTGTCACAGCCATaGAGGCCCTTCTTTCTCAAT +
Preference number: 5 (lower is better)
Translates to: KAWRSSWLRVVLSIQKVLGLSQP*RPFFLN
Trigger: ATTGAGAAAGAAGGGCCTCAATGGCTGTGACAGCCC...AAGGACTTTTTGTATAGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp CAGGTTTGTGAGCGTGCTTGGATGTTAGGTGACAGGCGTGTTCCTACAATTACCGGAGTTATTTATCCTTaGATTCAACAGCAGATCCAC +
Preference number: 5 (lower is better)
Translates to: QVCERAWMLGDRRVPTITGVIYP*IQQQIH
Trigger: GTGGATCTGCTGTTGAATCAAAGGATAAATAACTCC...GGTAATTGTAGGAACACGCCTGTCACCTAACATCCAAGCACGCTCACAAACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR CAA 90 bp ACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTAGCTTGTTGGTGCTGTaGAAGATGATCAGTGCAATC +
Preference number: 5 (lower is better)
Translates to: TITGSHHLPGLSKPLYIFSLLVL*KMISAI
Trigger: GATTGCACTGATCATCTTCAACAGCACCAACAAGCT...AAAAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp AATTTAGGATGTTGCAATGTAATATGTTCTAACCCCACAGCTTATCCTTTTGACCCACAATGTCTGAGTTaGTCCGGCTCTCGTGCGGCT +
Preference number: 5 (lower is better)
Translates to: NLGCCNVICSNPTAYPFDPQCLS*SGSRAA
Trigger: AGCCGCACGAGAGCCGGACAAACTCAGACATTGTGG...GTCAAAAGGATAAGCTGTGGGGTTAGAACATATTACATTGCAACATCCTAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CAA 90 bp AGATTCATAGGGGGAGGAGATTTGGCTTGTATATTCTTGTTCAGGTTACCAGGTCTGTGTTACCTGCACTaGGAGGTCTATGTGTTACAC +
Preference number: 5 (lower is better)
Translates to: RFIGGGDLACIFLFRLPGLCYLH*EVYVLH
Trigger: GTGTAACACATAGACCTCCAAGTGCAGGTAACACAG...ACCTGGTAACCTGAACAAGAATATACAAGCCAAATCTCCTCCCCCTATGAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000198360.2
CDS-3UTR CAA 90 bp CTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTGGCTTGTATATTCTaGTTCAGGTTACCAGGTGAG +
Preference number: 5 (lower is better)
Translates to: LQLPVVTTCRVCPNLYTFLACIF*FRLPGE
Trigger: CTCACCTGGTAACCTGAACAAGAATATACAAGCCAA...AAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp ATCCTTTTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTTTGGCTTGTATATTCTaGTTCAGGTTACCAGGTGAG +
Preference number: 5 (lower is better)
Translates to: ILLNECHTPMICLQVCERLACIF*FRLPGE
Trigger: CTCACCTGGTAACCTGAACAAGAATATACAAGCCAA...ACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAAAAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp CAAGGCAGGCTAGCATCCTATATGGATACCACCAAAGGTGCATTGTGGTCTAATGGGAGGAGATTTGGCTaGTATATTCTTGTTCAGGTT +
Preference number: 5 (lower is better)
Translates to: QGRLASYMDTTKGALWSNGRRFG*YILVQV
Trigger: AACCTGAACAAGAATATACAAGCCAAATCTCCTCCC...ATTAGACCACAATGCACCTTTGGTGGTATCCATATAGGATGCTAGCCTGCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR CAA 90 bp CCTTGGTGGGTTTTTACAGGACTGTTTAAAATATTAGCGAAGCTATTGAGGGAAGATGGCATCGTGTTCTaGCTGCCAGGTGGGATAAGA +
Preference number: 5 (lower is better)
Translates to: PWWVFTGLFKILAKLLREDGIVF*LPGGIR
Trigger: TCTTATCCCACCTGGCAGCAAGAACACGATGCCATC...TTCCCTCAATAGCTTCGCTAATATTTTAAACAGTCCTGTAAAAACCCACCAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp ATCCTTTTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTAAGGCAGGGAGAGATTaGAACTCTGAGATAAATGAG +
Preference number: 5 (lower is better)
Translates to: ILLNECHTPMICLQVCERKAGRD*NSEINE
Trigger: CTCATTTATCTCAGAGTTCAAATCTCTCCCTGCCTT...ACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAAAAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp CCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCTCTGAAGAGAGTCGCATGCGCTaGACTGAAGGACTTTCCCTT +
Preference number: 5 (lower is better)
Translates to: PFLSFLLFSFKVGMVLSEESRMR*TEGLSL
Trigger: AAGGGAAAGTCCTTCAGTCAAGCGCATGCGACTCTC...TTCAGAGAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp TTCCTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACAGGAGTTATTTATCCTTaGATTCAACAGCAGATCCAC +
Preference number: 5 (lower is better)
Translates to: FLQLPVVTTCRVCPNLYTGVIYP*IQQQIH
Trigger: GTGGATCTGCTGTTGAATCAAAGGATAAATAACTCC...TGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR CAA 90 bp TATATGGATACCACCAAAGGTGCATTGTGGTCTAATTCTGGATTGCAGATCAAGCTGTGTTACCTGCACTaGGAGGTCTATGTGTTACAC +
Preference number: 5 (lower is better)
Translates to: YMDTTKGALWSNSGLQIKLCYLH*EVYVLH
Trigger: GTGTAACACATAGACCTCCAAGTGCAGGTAACACAG...CTTGATCTGCAATCCAGAATTAGACCACAATGCACCTTTGGTGGTATCCATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR CAA 90 bp CCCTTTCCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCCTGTGTTACCTGCACTaGGAGGTCTATGTGTTACAC +
Preference number: 5 (lower is better)
Translates to: PFPFLSFLLFSFKVGMVLLCYLH*EVYVLH
Trigger: GTGTAACACATAGACCTCCAAGTGCAGGTAACACAG...GAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGGAAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp AGCTTGCAGGACTTAGGCTCCAACACAGCTTCTTACTCTGGGCATATTTCTAAAGGGAGGAGATTTGGCTaGTATATTCTTGTTCAGGTT +
Preference number: 5 (lower is better)
Translates to: SLQDLGSNTASYSGHISKGRRFG*YILVQV
Trigger: AACCTGAACAAGAATATACAAGCCAAATCTCCTCCC...TTTAGAAATATGCCCAGAGTAAGAAGCTGTGTTGGAGCCTAAGTCCTGCAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CAA 90 bp GTTATCTTGGTTAGCAAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTGGGAGGAGATTTGGCTaGTATATTCTTGTTCAGGTT +
Preference number: 5 (lower is better)
Translates to: VILVSKAWRSSWLRVVLSGRRFG*YILVQV
Trigger: AACCTGAACAAGAATATACAAGCCAAATCTCCTCCC...AGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTTGCTAACCAAGATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp ACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTATAGGGGGAGGAGATTaGGCTTGTATATTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: TITGSHHLPGLSKPLYIFIGGGD*ACIFLF
Trigger: GAACAAGAATATACAAGCCAAATCTCCTCCCCCTAT...AAAAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp GTTATCTTGGTTAGCAAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTATAGGGGGAGGAGATTaGGCTTGTATATTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: VILVSKAWRSSWLRVVLSIGGGD*ACIFLF
Trigger: GAACAAGAATATACAAGCCAAATCTCCTCCCCCTAT...AGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTTGCTAACCAAGATAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp ATCCCCCAGAGCTCTGCCCTAGACTTCTCAATACAAAGAACTTGGTGTGATCAACAGTACCATATGTTGTaGAAATGGCTGATGGATATC +
Preference number: 5 (lower is better)
Translates to: IPQSSALDFSIQRTWCDQQYHML*KWLMDI
Trigger: GATATCCATCAGCCATTTCAACAACATATGGTACTG...TTGATCACACCAAGTTCTTTGTATTGAGAAGTCTAGGGCAGAGCTCTGGGGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
CDS-3UTR CAA 90 bp CCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTCTATATGCAGTACCATATGTTGTaGAAATGGCTGATGGATATC +
Preference number: 5 (lower is better)
Translates to: PVVTTCRVCPNLYTFFYMQYHML*KWLMDI
Trigger: GATATCCATCAGCCATTTCAACAACATATGGTACTG...CATATAGAAAAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp ATCCTTTTGAATGAGTGCCATACGCCAATGATATGCCTGCAGGTTTGTGAGCGTCAGTACCATATGTTGTaGAAATGGCTGATGGATATC +
Preference number: 5 (lower is better)
Translates to: ILLNECHTPMICLQVCERQYHML*KWLMDI
Trigger: GATATCCATCAGCCATTTCAACAACATATGGTACTG...ACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACTCATTCAAAAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp CTACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTACTCAGTACCATATGTaGTTGAAATGGCTGATGGAT +
Preference number: 5 (lower is better)
Translates to: LQLPVVTTCRVCPNLYTFTQYHM*LKWLMD
Trigger: ATCCATCAGCCATTTCAACAACATATGGTACTGAGT...AAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp CCTTGGTGGGTTTTTACAGGACTGTTTAAAATATTAGCGAAGCTATTGAGGGAACTGTGTTACCTGCACTaGGAGGTCTATGTGTTACAC +
Preference number: 5 (lower is better)
Translates to: PWWVFTGLFKILAKLLRELCYLH*EVYVLH
Trigger: GTGTAACACATAGACCTCCAAGTGCAGGTAACACAG...TTCCCTCAATAGCTTCGCTAATATTTTAAACAGTCCTGTAAAAACCCACCAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp GGCAGGGCTAATGTTACTGCATTCTTTGTTCTGTATGTCAGGATTAATGACAGGATAGGGGGAGGAGATTaGGCTTGTATATTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: GRANVTAFFVLYVRINDRIGGGD*ACIFLF
Trigger: GAACAAGAATATACAAGCCAAATCTCCTCCCCCTAT...CCTGTCATTAATCCTGACATACAGAACAAAGAATGCAGTAACATTAGCCCTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR CAA 90 bp AGAGTACACTGCTGCATTCAAACCACAACTAGAATCCAACACTTAGCGAACCTCACTCAGTACCATATGTaGTTGAAATGGCTGATGGAT +
Preference number: 5 (lower is better)
Translates to: RVHCCIQTTTRIQHLANLTQYHM*LKWLMD
Trigger: ATCCATCAGCCATTTCAACAACATATGGTACTGAGT...GAGGTTCGCTAAGTGTTGGATTCTAGTTGTGGTTTGAATGCAGCAGTGTACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
CDS-3UTR CAA 90 bp GTTATCTTGGTTAGCAAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTACTCAGTACCATATGTaGTTGAAATGGCTGATGGAT +
Preference number: 5 (lower is better)
Translates to: VILVSKAWRSSWLRVVLSTQYHM*LKWLMD
Trigger: ATCCATCAGCCATTTCAACAACATATGGTACTGAGT...AGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTTGCTAACCAAGATAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp ACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTACTCAGTACCATATGTaGTTGAAATGGCTGATGGAT +
Preference number: 5 (lower is better)
Translates to: TITGSHHLPGLSKPLYIFTQYHM*LKWLMD
Trigger: ATCCATCAGCCATTTCAACAACATATGGTACTGAGT...AAAAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp AATTTAGGATGTTGCAATGTAATATGTTCTAACCCCACAGCTTATCCTTTTGACGAGAGTCGCATGCGCTaGACTGAAGGACTTTCCCTT +
Preference number: 5 (lower is better)
Translates to: NLGCCNVICSNPTAYPFDESRMR*TEGLSL
Trigger: AAGGGAAAGTCCTTCAGTCAAGCGCATGCGACTCTC...GTCAAAAGGATAAGCTGTGGGGTTAGAACATATTACATTGCAACATCCTAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CAA 90 bp AATCTATTTTGTACAAGTGTTCTGTTGTACAACTCAAGTGCTAAGCGTATCTCAGAGAGTCGCATGCGCTaGACTGAAGGACTTTCCCTT +
Preference number: 5 (lower is better)
Translates to: NLFCTSVLLYNSSAKRISESRMR*TEGLSL
Trigger: AAGGGAAAGTCCTTCAGTCAAGCGCATGCGACTCTC...TGAGATACGCTTAGCACTTGAGTTGTACAACAGAACACTTGTACAAAATAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp ACAATTACCGGTAGTCACCACTTGCCGGGTCTGTCCAAACCTCTATACATTTTTGGAGTTATTTATCCTTaGATTCAACAGCAGATCCAC +
Preference number: 5 (lower is better)
Translates to: TITGSHHLPGLSKPLYIFGVIYP*IQQQIH
Trigger: GTGGATCTGCTGTTGAATCAAAGGATAAATAACTCC...AAAAATGTATAGAGGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR CAA 90 bp AGCTTGCAGGACTTAGGCTCCAACACAGCTTCTTACTCTGGGCATATTTCTAAAGGAGTTATTTATCCTTaGATTCAACAGCAGATCCAC +
Preference number: 5 (lower is better)
Translates to: SLQDLGSNTASYSGHISKGVIYP*IQQQIH
Trigger: GTGGATCTGCTGTTGAATCAAAGGATAAATAACTCC...TTTAGAAATATGCCCAGAGTAAGAAGCTGTGTTGGAGCCTAAGTCCTGCAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR CAA 90 bp TATATGGATACCACCAAAGGTGCATTGTGGTCTAATTCTGGATTGCAGATCAAGTTGGCTTGTATATTCTaGTTCAGGTTACCAGGTGAG +
Preference number: 5 (lower is better)
Translates to: YMDTTKGALWSNSGLQIKLACIF*FRLPGE
Trigger: CTCACCTGGTAACCTGAACAAGAATATACAAGCCAA...CTTGATCTGCAATCCAGAATTAGACCACAATGCACCTTTGGTGGTATCCATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR CAA 90 bp CCCTTTCCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCTTGGCTTGTATATTCTaGTTCAGGTTACCAGGTGAG +
Preference number: 5 (lower is better)
Translates to: PFPFLSFLLFSFKVGMVLLACIF*FRLPGE
Trigger: CTCACCTGGTAACCTGAACAAGAATATACAAGCCAA...GAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGGAAAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp AAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTATACAAAAAGTCCTTGGGAGGAGATTTGGCTaGTATATTCTTGTTCAGGTT +
Preference number: 5 (lower is better)
Translates to: KAWRSSWLRVVLSIQKVLGRRFG*YILVQV
Trigger: AACCTGAACAAGAATATACAAGCCAAATCTCCTCCC...AAGGACTTTTTGTATAGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp TATATGGATACCACCAAAGGTGCATTGTGGTCTAATTCTGGATTGCAGATCAAGATAGGGGGAGGAGATTaGGCTTGTATATTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: YMDTTKGALWSNSGLQIKIGGGD*ACIFLF
Trigger: GAACAAGAATATACAAGCCAAATCTCCTCCCCCTAT...CTTGATCTGCAATCCAGAATTAGACCACAATGCACCTTTGGTGGTATCCATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000197146.5
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR CAA 90 bp AAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTATACAAAAAGTCCTTAAGGCAGGGAGAGATTaGAACTCTGAGATAAATGAG +
Preference number: 5 (lower is better)
Translates to: KAWRSSWLRVVLSIQKVLKAGRD*NSEINE
Trigger: CTCATTTATCTCAGAGTTCAAATCTCTCCCTGCCTT...AAGGACTTTTTGTATAGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp TATATGGATACCACCAAAGGTGCATTGTGGTCTAATTCTGGATTGCAGATCAAGAAGGCAGGGAGAGATTaGAACTCTGAGATAAATGAG +
Preference number: 5 (lower is better)
Translates to: YMDTTKGALWSNSGLQIKKAGRD*NSEINE
Trigger: CTCATTTATCTCAGAGTTCAAATCTCTCCCTGCCTT...CTTGATCTGCAATCCAGAATTAGACCACAATGCACCTTTGGTGGTATCCATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR CAA 90 bp CCTTGGTGGGTTTTTACAGGACTGTTTAAAATATTAGCGAAGCTATTGAGGGAATTAATTTTCCTGTACTaGTCCTCAGACTCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: PWWVFTGLFKILAKLLRELIFLY*SSDSGL
Trigger: CAGCCCTGAGTCTGAGGACAAGTACAGGAAAATTAA...TTCCCTCAATAGCTTCGCTAATATTTTAAACAGTCCTGTAAAAACCCACCAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp CCCTTTCCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCCCTTTGTTTTCTTTCTaGTTCAATGCCTCCACAATG +
Preference number: 5 (lower is better)
Translates to: PFPFLSFLLFSFKVGMVLPLFSF*FNASTM
Trigger: CATTGTGGAGGCATTGAACAAGAAAGAAAACAAAGG...GAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGGAAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000185052.6
ENSMUST00000198199.5
CDS-3UTR CAA 90 bp CCTTGGTGGGTTTTTACAGGACTGTTTAAAATATTAGCGAAGCTATTGAGGGAATTGGCTTGTATATTCTaGTTCAGGTTACCAGGTGAG +
Preference number: 5 (lower is better)
Translates to: PWWVFTGLFKILAKLLRELACIF*FRLPGE
Trigger: CTCACCTGGTAACCTGAACAAGAATATACAAGCCAA...TTCCCTCAATAGCTTCGCTAATATTTTAAACAGTCCTGTAAAAACCCACCAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp CCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCTCTGAATTGGCTTGTATATTCTaGTTCAGGTTACCAGGTGAG +
Preference number: 5 (lower is better)
Translates to: PFLSFLLFSFKVGMVLSELACIF*FRLPGE
Trigger: CTCACCTGGTAACCTGAACAAGAATATACAAGCCAA...TTCAGAGAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp CCTTGGTGGGTTTTTACAGGACTGTTTAAAATATTAGCGAAGCTATTGAGGGAAATAGGGGGAGGAGATTaGGCTTGTATATTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: PWWVFTGLFKILAKLLREIGGGD*ACIFLF
Trigger: GAACAAGAATATACAAGCCAAATCTCCTCCCCCTAT...TTCCCTCAATAGCTTCGCTAATATTTTAAACAGTCCTGTAAAAACCCACCAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp CCCTTTCCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCCAGTACCATATGTTGTaGAAATGGCTGATGGATATC +
Preference number: 5 (lower is better)
Translates to: PFPFLSFLLFSFKVGMVLQYHML*KWLMDI
Trigger: GATATCCATCAGCCATTTCAACAACATATGGTACTG...GAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGGAAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp AAAGCATGGAGATCCTCATGGCTTAGGGTAGTGCTTTCTATACAAAAAGTCCTTACTCAGTACCATATGTaGTTGAAATGGCTGATGGAT +
Preference number: 5 (lower is better)
Translates to: KAWRSSWLRVVLSIQKVLTQYHM*LKWLMD
Trigger: ATCCATCAGCCATTTCAACAACATATGGTACTGAGT...AAGGACTTTTTGTATAGAAAGCACTACCCTAAGCCATGAGGATCTCCATGCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp CCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCTCTGAACCTTTGTTTTCTTTCTaGTTCAATGCCTCCACAATG +
Preference number: 5 (lower is better)
Translates to: PFLSFLLFSFKVGMVLSEPLFSF*FNASTM
Trigger: CATTGTGGAGGCATTGAACAAGAAAGAAAACAAAGG...TTCAGAGAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000005722.14
ENSMUST00000185052.6
ENSMUST00000198199.5
CDS-3UTR CAA 90 bp CCTTTCCTTTCCTTTCTTCTCTTTTCTTTTAAGGTAGGTATGGTCCTCTCTGAACAGTACCATATGTTGTaGAAATGGCTGATGGATATC +
Preference number: 5 (lower is better)
Translates to: PFLSFLLFSFKVGMVLSEQYHML*KWLMDI
Trigger: GATATCCATCAGCCATTTCAACAACATATGGTACTG...TTCAGAGAGGACCATACCTACCTTAAAAGAAAAGAGAAGAAAGGAAAGGAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp CCTTGGTGGGTTTTTACAGGACTGTTTAAAATATTAGCGAAGCTATTGAGGGAACAGTACCATATGTTGTaGAAATGGCTGATGGATATC +
Preference number: 5 (lower is better)
Translates to: PWWVFTGLFKILAKLLREQYHML*KWLMDI
Trigger: GATATCCATCAGCCATTTCAACAACATATGGTACTG...TTCCCTCAATAGCTTCGCTAATATTTTAAACAGTCCTGTAAAAACCCACCAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp AATCTATTTTGTACAAGTGTTCTGTTGTACAACTCAAGTGCTAAGCGTATCTCATTAATTTTCCTGTACTaGTCCTCAGACTCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: NLFCTSVLLYNSSAKRISLIFLY*SSDSGL
Trigger: CAGCCCTGAGTCTGAGGACAAGTACAGGAAAATTAA...TGAGATACGCTTAGCACTTGAGTTGTACAACAGAACACTTGTACAAAATAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp AATCTATTTTGTACAAGTGTTCTGTTGTACAACTCAAGTGCTAAGCGTATCTCAGGGAGGAGATTTGGCTaGTATATTCTTGTTCAGGTT +
Preference number: 5 (lower is better)
Translates to: NLFCTSVLLYNSSAKRISGRRFG*YILVQV
Trigger: AACCTGAACAAGAATATACAAGCCAAATCTCCTCCC...TGAGATACGCTTAGCACTTGAGTTGTACAACAGAACACTTGTACAAAATAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp AATCTATTTTGTACAAGTGTTCTGTTGTACAACTCAAGTGCTAAGCGTATCTCAATAGGGGGAGGAGATTaGGCTTGTATATTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: NLFCTSVLLYNSSAKRISIGGGD*ACIFLF
Trigger: GAACAAGAATATACAAGCCAAATCTCCTCCCCCTAT...TGAGATACGCTTAGCACTTGAGTTGTACAACAGAACACTTGTACAAAATAGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp AATTTAGGATGTTGCAATGTAATATGTTCTAACCCCACAGCTTATCCTTTTGACATAGGGGGAGGAGATTaGGCTTGTATATTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: NLGCCNVICSNPTAYPFDIGGGD*ACIFLF
Trigger: GAACAAGAATATACAAGCCAAATCTCCTCCCCCTAT...GTCAAAAGGATAAGCTGTGGGGTTAGAACATATTACATTGCAACATCCTAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CAA 90 bp AATTTAGGATGTTGCAATGTAATATGTTCTAACCCCACAGCTTATCCTTTTGACAAGGCAGGGAGAGATTaGAACTCTGAGATAAATGAG +
Preference number: 5 (lower is better)
Translates to: NLGCCNVICSNPTAYPFDKAGRD*NSEINE
Trigger: CTCATTTATCTCAGAGTTCAAATCTCTCCCTGCCTT...GTCAAAAGGATAAGCTGTGGGGTTAGAACATATTACATTGCAACATCCTAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000199019.5
ENSMUST00000199105.5
CDS-3UTR CAA 90 bp AATCTATTTTGTACAAGTGTTCTGTTGTACAACTCAAGTGCTAAGCGTATCTCAAAGGCAGGGAGAGATTaGAACTCTGAGATAAATGAG +
Preference number: 5 (lower is better)
Translates to: NLFCTSVLLYNSSAKRISKAGRD*NSEINE
Trigger: CTCATTTATCTCAGAGTTCAAATCTCTCCCTGCCTT...TGAGATACGCTTAGCACTTGAGTTGTACAACAGAACACTTGTACAAAATAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp AATCTATTTTGTACAAGTGTTCTGTTGTACAACTCAAGTGCTAAGCGTATCTCACAGTACCATATGTTGTaGAAATGGCTGATGGATATC +
Preference number: 5 (lower is better)
Translates to: NLFCTSVLLYNSSAKRISQYHML*KWLMDI
Trigger: GATATCCATCAGCCATTTCAACAACATATGGTACTG...TGAGATACGCTTAGCACTTGAGTTGTACAACAGAACACTTGTACAAAATAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS-3UTR CAA 90 bp AATTTAGGATGTTGCAATGTAATATGTTCTAACCCCACAGCTTATCCTTTTGACACTCAGTACCATATGTaGTTGAAATGGCTGATGGAT +
Preference number: 5 (lower is better)
Translates to: NLGCCNVICSNPTAYPFDTQYHM*LKWLMD
Trigger: ATCCATCAGCCATTTCAACAACATATGGTACTGAGT...GTCAAAAGGATAAGCTGTGGGGTTAGAACATATTACATTGCAACATCCTAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
CDS-3UTR CAA 90 bp AATCTATTTTGTACAAGTGTTCTGTTGTACAACTCAAGTGCTAAGCGTATCTCAACTCAGTACCATATGTaGTTGAAATGGCTGATGGAT +
Preference number: 5 (lower is better)
Translates to: NLFCTSVLLYNSSAKRISTQYHM*LKWLMD
Trigger: ATCCATCAGCCATTTCAACAACATATGGTACTGAGT...TGAGATACGCTTAGCACTTGAGTTGTACAACAGAACACTTGTACAAAATAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS GCA 72 bp CCGGGGGTTGCCGTATCCATTCCCTGCGCTGGTGCCTaGACCGGATGTCAGATCTCCGCCCATCAGACCGCC +
Preference number: 6 (lower is better)
Translates to: PGVAVSIPCAGA*TGCQISAHQTA
Trigger: GGCGGTCTGATGGGCGGAGATCTGACATCCGGTGCAGGCACCAGCGCAGGGAATGGATACGGCAACCCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000197938.5
ENSMUST00000198199.5
ENSMUST00000198217.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199167.5
ENSMUST00000199210.5
ENSMUST00000199432.5
ENSMUST00000199450.5
ENSMUST00000200138.5
CDS CCA 72 bp AGGAGACCTCCCCGCCTCGTGGCGCGTGGTGTGTTGTaGGTATCTCGAAGGGGTGGTGGTACGGTCTCTAGG +
Preference number: 6 (lower is better)
Translates to: RRPPRLVARGVL*VSRRGGGTVSR
Trigger: CCTAGAGACCGTACCACCACCCCTTCGAGATACCCACAACACACCACGCGCCACGAGGCGGGGAGGTCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197722.5
ENSMUST00000198217.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199450.5
CDS CCA 72 bp AGGAGACCTCCCCGCCTCGTGGCGCGTGGTGTGTTGTaGGTATCTCGAAGGGGTGGTGGTACGGTCTCCCAA +
Preference number: 6 (lower is better)
Translates to: RRPPRLVARGVL*VSRRGGGTVSQ
Trigger: TTGGGAGACCGTACCACCACCCCTTCGAGATACCCACAACACACCACGCGCCACGAGGCGGGGAGGTCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199210.5
ENSMUST00000199432.5
CDS CCA 72 bp AGGAGACCTCCCCGCCTCGTGGCGCGTGGTGTGTTGTaGGTATCTCGAAGGGGTGGTGGTACGGTCCCAACT +
Preference number: 6 (lower is better)
Translates to: RRPPRLVARGVL*VSRRGGGTVPT
Trigger: AGTTGGGACCGTACCACCACCCCTTCGAGATACCCACAACACACCACGCGCCACGAGGCGGGGAGGTCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000197145.2
ENSMUST00000200138.5
CDS CAA 72 bp AACAGGAGACCTCCCCGCCTCGTGGCGCGTGGTGTGTaGTGGGTATCTCGAAGGGGTGGTGGTACGGTCTCC +
Preference number: 6 (lower is better)
Translates to: NRRPPRLVARGV*WVSRRGGGTVS
Trigger: GGAGACCGTACCACCACCCCTTCGAGATACCCACAACACACCACGCGCCACGAGGCGGGGAGGTCTCCTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199210.5
ENSMUST00000199432.5
CDS CAA 72 bp AACAGGAGACCTCCCCGCCTCGTGGCGCGTGGTGTGTaGTGGGTATCTCGAAGGGGTGGTGGTACGGTCCCA +
Preference number: 6 (lower is better)
Translates to: NRRPPRLVARGV*WVSRRGGGTVP
Trigger: TGGGACCGTACCACCACCCCTTCGAGATACCCACAACACACCACGCGCCACGAGGCGGGGAGGTCTCCTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000197145.2
ENSMUST00000200138.5
CDS CCA 72 bp GTGAGTTCCGGGGGTTGCCGTATCCATTCCCTGCGCTaGTGCCTGCACCGGATGTCAGATCTCCGCCCATCA +
Preference number: 6 (lower is better)
Translates to: VSSGGCRIHSLR*CLHRMSDLRPS
Trigger: TGATGGGCGGAGATCTGACATCCGGTGCAGGCACCAGCGCAGGGAATGGATACGGCAACCCCCGGAACTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000197938.5
ENSMUST00000198199.5
ENSMUST00000198217.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199167.5
ENSMUST00000199210.5
ENSMUST00000199432.5
ENSMUST00000199450.5
ENSMUST00000200138.5
CDS CCA 72 bp AGCTGTCAACAGGAGACCTCCCCGCCTCGTGGCGCGTaGTGTGTTGTGGGTATCTCGAAGGGGTGGTGGTAC +
Preference number: 6 (lower is better)
Translates to: SCQQETSPPRGA*CVVGISKGWWY
Trigger: GTACCACCACCCCTTCGAGATACCCACAACACACCACGCGCCACGAGGCGGGGAGGTCTCCTGTTGACAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000198217.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199210.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS CCA 72 bp CTGCTCAAGCTGTCAACAGGAGACCTCCCCGCCTCGTaGCGCGTGGTGTGTTGTGGGTATCTCGAAGGGGTG +
Preference number: 6 (lower is better)
Translates to: LLKLSTGDLPAS*RVVCCGYLEGV
Trigger: CACCCCTTCGAGATACCCACAACACACCACGCGCCACGAGGCGGGGAGGTCTCCTGTTGACAGCTTGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000198217.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199210.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS CAA 72 bp AACAGGAGACCTCCCCGCCTCGTGGCGCGTGGTGTGTaGTGGGTATCTCGAAGGGGTGGTGGTACGGTCTCT +
Preference number: 6 (lower is better)
Translates to: NRRPPRLVARGV*WVSRRGGGTVS
Trigger: AGAGACCGTACCACCACCCCTTCGAGATACCCACAACACACCACGCGCCACGAGGCGGGGAGGTCTCCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197722.5
ENSMUST00000198217.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199450.5
CDS CAA 90 bp CAAGCTGTCAACAGGAGACCTCCCCGCCTCGTGGCGCGTGGTGTGTaGTGGGTATCTCGAAGGGGTGGTGGTACGGTCTCTAGGAGGAGA +
Preference number: 6 (lower is better)
Translates to: QAVNRRPPRLVARGV*WVSRRGGGTVSRRR
Trigger: TCTCCTCCTAGAGACCGTACCACCACCCCTTCGAGATACCCACAACACACCACGCGCCACGAGGCGGGGAGGTCTCCTGTTGACAGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197722.5
ENSMUST00000198217.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199450.5
CDS CAA 90 bp CAAGCTGTCAACAGGAGACCTCCCCGCCTCGTGGCGCGTGGTGTGTaGTGGGTATCTCGAAGGGGTGGTGGTACGGTCTCCCAACTGACT +
Preference number: 6 (lower is better)
Translates to: QAVNRRPPRLVARGV*WVSRRGGGTVSQLT
Trigger: AGTCAGTTGGGAGACCGTACCACCACCCCTTCGAGATACCCACAACACACCACGCGCCACGAGGCGGGGAGGTCTCCTGTTGACAGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000199210.5
ENSMUST00000199432.5
CDS GCA 72 bp CTGAGGGCAGATGGCGGCATGTTATGTAGGTGCTGCTaGTGCCAGCCAGTTACAGAGCCGAGGTGGAGCGCA +
Preference number: 6 (lower is better)
Translates to: LRADGGMLCRCC*CQPVTEPRWSA
Trigger: TGCGCTCCACCTCGGCTCTGTAACTGGCTGGCAGCAGCAGCACCTACATAACATGCCGCCATCTGCCCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197145.2
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000198217.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199210.5
ENSMUST00000199432.5
ENSMUST00000199450.5
ENSMUST00000200138.5
CDS GCA 72 bp CCTCTCGGTCGCTCCCATCGTAGGAACTGCTACAGCTaGTCAAGCTGTCAACAGGAGACCTCCCCGCCTCGT +
Preference number: 6 (lower is better)
Translates to: PLGRSHRRNCYS*SSCQQETSPPR
Trigger: ACGAGGCGGGGAGGTCTCCTGTTGACAGCTTGAGCAGCTGTAGCAGTTCCTACGATGGGAGCGACCGAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000198217.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199210.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS CCA 72 bp AGGTGCTGCTGCTGCCAGCCAGTTACAGAGCCGAGGTaGAGCGCACTGGCAGTGTTGAAGCCAGACAGAGAT +
Preference number: 6 (lower is better)
Translates to: RCCCCQPVTEPR*SALAVLKPDRD
Trigger: ATCTCTGTCTGGCTTCAACACTGCCAGTGCGCTCCACCTCGGCTCTGTAACTGGCTGGCAGCAGCAGCACCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197145.2
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000198217.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199210.5
ENSMUST00000199432.5
ENSMUST00000199450.5
ENSMUST00000200138.5
CDS GCA 72 bp TCCGGTGATCCTCTCGGTCGCTCCCATCGTAGGAACTaGTACAGCTGCTCAAGCTGTCAACAGGAGACCTCC +
Preference number: 6 (lower is better)
Translates to: SGDPLGRSHRRN*YSCSSCQQETS
Trigger: GGAGGTCTCCTGTTGACAGCTTGAGCAGCTGTAGCAGTTCCTACGATGGGAGCGACCGAGAGGATCACCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000198199.5
ENSMUST00000198217.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199210.5
ENSMUST00000199432.5
ENSMUST00000199450.5
CDS CAA 90 bp TGCTGCCAGCCAGTTACAGAGCCGAGGTGGAGCGCACTGGCAGTGTaGAAGCCAGACAGAGATGACAGATCTGCGCTACTCAGAGAGTAC +
Preference number: 6 (lower is better)
Translates to: CCQPVTEPRWSALAV*KPDRDDRSALLREY
Trigger: GTACTCTCTGAGTAGCGCAGATCTGTCATCTCTGTCTGGCTTCAACACTGCCAGTGCGCTCCACCTCGGCTCTGTAACTGGCTGGCAGCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197145.2
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000198217.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199210.5
ENSMUST00000199432.5
ENSMUST00000199450.5
ENSMUST00000200138.5
CDS TCA 72 bp CCTGTACTTGTCCTCAGACTCAGGGCTGTGACCTACTaGATCGTCTGCATCGGGATCTGGGCTGTCACAGCC +
Preference number: 6 (lower is better)
Translates to: PVLVLRLRAVTY*IVCIGIWAVTA
Trigger: GGCTGTGACAGCCCAGATCCCGATGCAGACGATTCAGTAGGTCACAGCCCTGAGTCTGAGGACAAGTACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000195904.5
ENSMUST00000195984.5
ENSMUST00000196493.5
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198064.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
ENSMUST00000200394.5
CDS TCA 72 bp CAGTTACAGAGCCGAGGTGGAGCGCACTGGCAGTGTTaGAGCCAGACAGAGATGACAGATCTGCGCTACTCA +
Preference number: 6 (lower is better)
Translates to: QLQSRGGAHWQC*SQTEMTDLRYS
Trigger: TGAGTAGCGCAGATCTGTCATCTCTGTCTGGCTTCAACACTGCCAGTGCGCTCCACCTCGGCTCTGTAACTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197145.2
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000198217.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199210.5
ENSMUST00000199432.5
ENSMUST00000199450.5
ENSMUST00000200138.5
CDS CCA 72 bp AGACATACTATTCCTCTGCAGAGACGGGTGGGCCAGTaGCAGAAGATTGGGGTTTCCCAGTGTGCTGACAGG +
Preference number: 6 (lower is better)
Translates to: RHTIPLQRRVGQ*QKIGVSQCADR
Trigger: CCTGTCAGCACACTGGGAAACCCCAATCTTCTGCCACTGGCCCACCCGTCTCTGCAGAGGAATAGTATGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000195984.5
ENSMUST00000196730.5
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000197938.5
ENSMUST00000198199.5
ENSMUST00000198217.5
ENSMUST00000198360.2
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199167.5
ENSMUST00000199210.5
ENSMUST00000199432.5
ENSMUST00000199450.5
ENSMUST00000200138.5
CDS CCA 72 bp ACACCAGGAGACATACTATTCCTCTGCAGAGACGGGTaGGCCAGTGGCAGAAGATTGGGGTTTCCCAGTGTG +
Preference number: 6 (lower is better)
Translates to: TPGDILFLCRDG*ASGRRLGFPSV
Trigger: CACACTGGGAAACCCCAATCTTCTGCCACTGGCCCACCCGTCTCTGCAGAGGAATAGTATGTCTCCTGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000195984.5
ENSMUST00000196730.5
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000197938.5
ENSMUST00000198199.5
ENSMUST00000198217.5
ENSMUST00000198360.2
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199167.5
ENSMUST00000199210.5
ENSMUST00000199432.5
ENSMUST00000199450.5
ENSMUST00000200138.5
CDS TCA 72 bp GGGCCAGTGGCAGAAGATTGGGGTTTCCCAGTGTGCTaGCAGGATTGCTGTACACCAAACTGTTATGGCTGG +
Preference number: 6 (lower is better)
Translates to: GPVAEDWGFPVC*QDCCTPNCYGW
Trigger: CCAGCCATAACAGTTTGGTGTACAGCAATCCTGTCAGCACACTGGGAAACCCCAATCTTCTGCCACTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000195984.5
ENSMUST00000196730.5
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000197938.5
ENSMUST00000198199.5
ENSMUST00000198217.5
ENSMUST00000198360.2
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199167.5
ENSMUST00000199210.5
ENSMUST00000199432.5
ENSMUST00000199450.5
ENSMUST00000200138.5
CDS TCA 72 bp GTGGAGCGCACTGGCAGTGTTGAAGCCAGACAGAGATaGCAGATCTGCGCTACTCAGAGAGTACTCAGTACC +
Preference number: 6 (lower is better)
Translates to: VERTGSVEARQR*QICATQRVLST
Trigger: GGTACTGAGTACTCTCTGAGTAGCGCAGATCTGTCATCTCTGTCTGGCTTCAACACTGCCAGTGCGCTCCAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197145.2
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000198217.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199210.5
ENSMUST00000199432.5
ENSMUST00000199450.5
ENSMUST00000200138.5
CDS CCA 72 bp CACCAAACTGTTATGGCTGGACACTGGGATGGTAACTaGCATCTCAAAGCTGGGAGGTGGAACAGCCTCCAC +
Preference number: 6 (lower is better)
Translates to: HQTVMAGHWDGN*HLKAGRWNSLH
Trigger: GTGGAGGCTGTTCCACCTCCCAGCTTTGAGATGCCAGTTACCATCCCAGTGTCCAGCCATAACAGTTTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198217.5
ENSMUST00000199210.5
CDS CAA 72 bp AGATCCACATCCTCAGACACTGATGGCATCGTGTTCTaGCTGCCAGGTGGGATAAGAACGCGGAGATCTGGC +
Preference number: 6 (lower is better)
Translates to: RSTSSDTDGIVF*LPGGIRTRRSG
Trigger: GCCAGATCTCCGCGTTCTTATCCCACCTGGCAGCAAGAACACGATGCCATCAGTGTCTGAGGATGTGGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185052.6
ENSMUST00000197145.2
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199210.5
CDS CAA 90 bp GACATACTATTCCTCTGCAGAGACGGGTGGGCCAGTGGCAGAAGATaGGGGTTTCCCAGTGTGCTGACAGGATTGCTGTACACCAAACTG +
Preference number: 6 (lower is better)
Translates to: DILFLCRDGWASGRR*GFPSVLTGLLYTKL
Trigger: CAGTTTGGTGTACAGCAATCCTGTCAGCACACTGGGAAACCCCAATCTTCTGCCACTGGCCCACCCGTCTCTGCAGAGGAATAGTATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000195984.5
ENSMUST00000196730.5
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000197938.5
ENSMUST00000198199.5
ENSMUST00000198217.5
ENSMUST00000198360.2
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199167.5
ENSMUST00000199210.5
ENSMUST00000199432.5
ENSMUST00000199450.5
ENSMUST00000200138.5
CDS GCA 72 bp TGTCAGATCTCCGCCCATCAGACCGCCTGTGTTACCTaGACTTGGAGGTCTATGTGTTACACCAGGAGACAT +
Preference number: 6 (lower is better)
Translates to: CQISAHQTACVT*TWRSMCYTRRH
Trigger: ATGTCTCCTGGTGTAACACATAGACCTCCAAGTGCAGGTAACACAGGCGGTCTGATGGGCGGAGATCTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000196730.5
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000197938.5
ENSMUST00000198199.5
ENSMUST00000198217.5
ENSMUST00000198360.2
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199167.5
ENSMUST00000199210.5
ENSMUST00000199432.5
ENSMUST00000199450.5
ENSMUST00000200138.5
CDS CAA 72 bp GGCAGAAGATTGGGGTTTCCCAGTGTGCTGACAGGATaGCTGTACACCAAACTGTTATGGCTGGACACTGGG +
Preference number: 6 (lower is better)
Translates to: GRRLGFPSVLTG*LYTKLLWLDTG
Trigger: CCCAGTGTCCAGCCATAACAGTTTGGTGTACAGCAATCCTGTCAGCACACTGGGAAACCCCAATCTTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000195984.5
ENSMUST00000196730.5
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000197938.5
ENSMUST00000198199.5
ENSMUST00000198217.5
ENSMUST00000198360.2
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199167.5
ENSMUST00000199210.5
ENSMUST00000199432.5
ENSMUST00000199450.5
ENSMUST00000200138.5
CDS CAA 90 bp TGGGCCAGTGGCAGAAGATTGGGGTTTCCCAGTGTGCTGACAGGATaGCTGTACACCAAACTGTTATGGCTGGACACTGGGATGGTAACT +
Preference number: 6 (lower is better)
Translates to: WASGRRLGFPSVLTG*LYTKLLWLDTGMVT
Trigger: AGTTACCATCCCAGTGTCCAGCCATAACAGTTTGGTGTACAGCAATCCTGTCAGCACACTGGGAAACCCCAATCTTCTGCCACTGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000195984.5
ENSMUST00000196730.5
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000197938.5
ENSMUST00000198199.5
ENSMUST00000198217.5
ENSMUST00000198360.2
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199167.5
ENSMUST00000199210.5
ENSMUST00000199432.5
ENSMUST00000199450.5
ENSMUST00000200138.5
CDS CAA 90 bp CGGATGTCAGATCTCCGCCCATCAGACCGCCTGTGTTACCTGCACTaGGAGGTCTATGTGTTACACCAGGAGACATACTATTCCTCTGCA +
Preference number: 6 (lower is better)
Translates to: RMSDLRPSDRLCYLH*EVYVLHQETYYSSA
Trigger: TGCAGAGGAATAGTATGTCTCCTGGTGTAACACATAGACCTCCAAGTGCAGGTAACACAGGCGGTCTGATGGGCGGAGATCTGACATCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000196730.5
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000197938.5
ENSMUST00000198199.5
ENSMUST00000198217.5
ENSMUST00000198360.2
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199167.5
ENSMUST00000199210.5
ENSMUST00000199432.5
ENSMUST00000199450.5
ENSMUST00000200138.5
CDS TCA 72 bp AATCGTCTGCATCGGGATCTGGGCTGTCACAGCCATTaGGGCCCTTCTTTCTCAATGTCTCCACAATGTCTG +
Preference number: 6 (lower is better)
Translates to: NRLHRDLGCHSH*GPSFSMSPQCL
Trigger: CAGACATTGTGGAGACATTGAGAAAGAAGGGCCTCAATGGCTGTGACAGCCCAGATCCCGATGCAGACGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000163888.8
ENSMUST00000195904.5
ENSMUST00000195984.5
ENSMUST00000196493.5
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198064.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
ENSMUST00000200394.5
CDS CCA 72 bp CACCAAACTGTTATGGCTGGACACTGGGATGGTAACTaGCATCTCAAAGCTGGGAGGTGGAACAGCAGGAAT +
Preference number: 6 (lower is better)
Translates to: HQTVMAGHWDGN*HLKAGRWNSRN
Trigger: ATTCCTGCTGTTCCACCTCCCAGCTTTGAGATGCCAGTTACCATCCCAGTGTCCAGCCATAACAGTTTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000196730.5
ENSMUST00000197938.5
ENSMUST00000198199.5
ENSMUST00000199167.5
CDS CCA 72 bp CACCAAACTGTTATGGCTGGACACTGGGATGGTAACTaGCATCTCAAAGCTGGGAGGTGGAACAGCACACAA +
Preference number: 6 (lower is better)
Translates to: HQTVMAGHWDGN*HLKAGRWNSTQ
Trigger: TTGTGTGCTGTTCCACCTCCCAGCTTTGAGATGCCAGTTACCATCCCAGTGTCCAGCCATAACAGTTTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000195904.5
ENSMUST00000195984.5
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
ENSMUST00000200394.5
CDS CCA 72 bp CACCAAACTGTTATGGCTGGACACTGGGATGGTAACTaGCATCTCAAAGCTGGGAGGTGGAACAGCAGGAAN +
Preference number: 6 (lower is better)
Translates to: HQTVMAGHWDGN*HLKAGRWNSRX
Trigger: NTTCCTGCTGTTCCACCTCCCAGCTTTGAGATGCCAGTTACCATCCCAGTGTCCAGCCATAACAGTTTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200138.5
CDS CAA 72 bp GATCTCCGCCCATCAGACCGCCTGTGTTACCTGCACTaGGAGGTCTATGTGTTACACCAGGAGACATACTAT +
Preference number: 6 (lower is better)
Translates to: DLRPSDRLCYLH*EVYVLHQETYY
Trigger: ATAGTATGTCTCCTGGTGTAACACATAGACCTCCAAGTGCAGGTAACACAGGCGGTCTGATGGGCGGAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000196730.5
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000197938.5
ENSMUST00000198199.5
ENSMUST00000198217.5
ENSMUST00000198360.2
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199167.5
ENSMUST00000199210.5
ENSMUST00000199432.5
ENSMUST00000199450.5
ENSMUST00000200138.5
CDS CAA 90 bp TTCAACAGCAGATCCACATCCTCAGACACTGATGGCATCGTGTTCTaGCTGCCAGGTGGGATAAGAACGCGGAGATCTGGCTTACGATTA +
Preference number: 6 (lower is better)
Translates to: FNSRSTSSDTDGIVF*LPGGIRTRRSGLRL
Trigger: TAATCGTAAGCCAGATCTCCGCGTTCTTATCCCACCTGGCAGCAAGAACACGATGCCATCAGTGTCTGAGGATGTGGATCTGCTGTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185052.6
ENSMUST00000197145.2
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199210.5
CDS TCA 72 bp TTAATTTTCCTGTACTTGTCCTCAGACTCAGGGCTGTaGCCTACTGAATCGTCTGCATCGGGATCTGGGCTG +
Preference number: 6 (lower is better)
Translates to: LIFLYLSSDSGL*PTESSASGSGL
Trigger: CAGCCCAGATCCCGATGCAGACGATTCAGTAGGTCACAGCCCTGAGTCTGAGGACAAGTACAGGAAAATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000195904.5
ENSMUST00000195984.5
ENSMUST00000196493.5
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198064.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199432.5
ENSMUST00000199450.5
ENSMUST00000200394.5
CDS TCA 72 bp CCTTTGATTCAACAGCAGATCCACATCCTCAGACACTaGTGGCATCGTGTTCTTGCTGCCAGGTGGGATAAG +
Preference number: 6 (lower is better)
Translates to: PLIQQQIHILRH*WHRVLAARWDK
Trigger: CTTATCCCACCTGGCAGCAAGAACACGATGCCATCAGTGTCTGAGGATGTGGATCTGCTGTTGAATCAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185052.6
ENSMUST00000197145.2
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199210.5
CDS CCA 72 bp ATCTCCGCCCATCAGACCGCCTGTGTTACCTGCACTTaGAGGTCTATGTGTTACACCAGGAGACATACTATT +
Preference number: 6 (lower is better)
Translates to: ISAHQTACVTCT*RSMCYTRRHTI
Trigger: AATAGTATGTCTCCTGGTGTAACACATAGACCTCCAAGTGCAGGTAACACAGGCGGTCTGATGGGCGGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000196730.5
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000197938.5
ENSMUST00000198199.5
ENSMUST00000198217.5
ENSMUST00000198360.2
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199167.5
ENSMUST00000199210.5
ENSMUST00000199432.5
ENSMUST00000199450.5
ENSMUST00000200138.5
CDS TCA 72 bp AGTAGGAGTTGCTACGGAAACCACCGGGGTAGCCAATaGCTGAGCCGACTGGGAGTTATTTATCCTTTGATT +
Preference number: 6 (lower is better)
Translates to: SRSCYGNHRGSQ*LSRLGVIYPLI
Trigger: AATCAAAGGATAAATAACTCCCAGTCGGCTCAGTCATTGGCTACCCCGGTGGTTTCCGTAGCAACTCCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197145.2
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000198217.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199210.5
ENSMUST00000199432.5
ENSMUST00000199450.5
ENSMUST00000200138.5
CDS CCA 72 bp AGTGTGCTGACAGGATTGCTGTACACCAAACTGTTATaGCTGGACACTGGGATGGTAACTGGCATCTCAAAG +
Preference number: 6 (lower is better)
Translates to: SVLTGLLYTKLL*LDTGMVTGISK
Trigger: CTTTGAGATGCCAGTTACCATCCCAGTGTCCAGCCATAACAGTTTGGTGTACAGCAATCCTGTCAGCACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000195904.5
ENSMUST00000195984.5
ENSMUST00000196730.5
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000197938.5
ENSMUST00000198199.5
ENSMUST00000198217.5
ENSMUST00000198360.2
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199167.5
ENSMUST00000199210.5
ENSMUST00000199432.5
ENSMUST00000199450.5
ENSMUST00000200138.5
CDS CAA 72 bp GATCTGCGCTACTCAGAGAGTACTCAGTACCATATGTaGTTGAAATGGCTGATGGATATCCTCCCATTCCTT +
Preference number: 6 (lower is better)
Translates to: DLRYSESTQYHM*LKWLMDILPFL
Trigger: AAGGAATGGGAGGATATCCATCAGCCATTTCAACAACATATGGTACTGAGTACTCTCTGAGTAGCGCAGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000005722.14
ENSMUST00000163888.8
ENSMUST00000185052.6
ENSMUST00000197145.2
ENSMUST00000197146.5
ENSMUST00000197681.5
ENSMUST00000197722.5
ENSMUST00000198199.5
ENSMUST00000198217.5
ENSMUST00000199019.5
ENSMUST00000199105.5
ENSMUST00000199210.5
ENSMUST00000199432.5
ENSMUST00000199450.5
ENSMUST00000200138.5