Pregenerated sensors for MEF2B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079033Ensembl transcript IDs: ENSMUST00000110140.2, ENSMUST00000110141.9, ENSMUST00000110143.8, ENSMUST00000110146.9, ENSMUST00000163756.2
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACCTCTTGGAGCGCTACCGTGGCCAGCTGTCAGGGGTCAAGCGGTaGAGGGAGGCCGAGGGCCGCAGTGGCTCTGCAAGGGGCCTGGCA | + |
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Preference number: 1 (lower is better) Translates to: NLLERYRGQLSGVKR*REAEGRSGSARGLA Trigger: TGCCAGGCCCCTTGCAGAGCCACTGCGGCCCTCGGCCTCCCTGCACCGCTTGACCCCTGACAGCTGGCCACGGTAGCGCTCCAAGAGGTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 |
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| 3UTR CCA 90 bp | TCGGGAACTCTGTGGAGGCTGGAGGAACCTCTTGGAGCGCTACCGTaGCCAGCTGTCAGGGGTCAAGCGGTGCAGGGAGGCCGAGGGCCG | + |
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Preference number: 1 (lower is better) Translates to: SGTLWRLEEPLGALP*PAVRGQAVQGGRGP Trigger: CGGCCCTCGGCCTCCCTGCACCGCTTGACCCCTGACAGCTGGCCACGGTAGCGCTCCAAGAGGTTCCTCCAGCCTCCACAGAGTTCCCGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 |
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| 3UTR CCA 90 bp | CGGGTAGGGGAAGGACCTGGGGAAGTCGCCAGAGGTCCCAGTGACTaGAGACAGTCGCTCAGACTTGATGCTGACCGGAGGTGTCGGAGG | + |
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Preference number: 1 (lower is better) Translates to: RVGEGPGEVARGPSD*RQSLRLDADRRCRR Trigger: CCTCCGACACCTCCGGTCAGCATCAAGTCTGAGCGACTGTCTCCAGTCACTGGGACCTCTGGCGACTTCCCCAGGTCCTTCCCCTACCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 |
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| 3UTR CCA 90 bp | CCTGGTGGTATAGGGAACCTGAGACTTCGGGAACTCTGTGGAGGCTaGAGGAACCTCTTGGAGCGCTACCGTGGCCAGCTGTCAGGGGTC | + |
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Preference number: 1 (lower is better) Translates to: PGGIGNLRLRELCGG*RNLLERYRGQLSGV Trigger: GACCCCTGACAGCTGGCCACGGTAGCGCTCCAAGAGGTTCCTCCAGCCTCCACAGAGTTCCCGAAGTCTCAGGTTCCCTATACCACCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 |
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| 3UTR CCA 90 bp | CGTCCGTCCTGGTGGTATAGGGAACCTGAGACTTCGGGAACTCTGTaGAGGCTGGAGGAACCTCTTGGAGCGCTACCGTGGCCAGCTGTC | + |
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Preference number: 1 (lower is better) Translates to: RPSWWYREPETSGTL*RLEEPLGALPWPAV Trigger: GACAGCTGGCCACGGTAGCGCTCCAAGAGGTTCCTCCAGCCTCCACAGAGTTCCCGAAGTCTCAGGTTCCCTATACCACCAGGACGGACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 |
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| 3UTR-3UTR GCA 90 bp | CCCCCAGGAAGGGACAGGGCCTTAGTGATGCACAGTGGGTGCCCTCGTCCGTCCTCAGGGGTCAAGCGGTaGAGGGAGGCCGAGGGCCGC | + |
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Preference number: 2 (lower is better) Translates to: PPGRDRALVMHSGCPRPSSGVKR*REAEGR Trigger: GCGGCCCTCGGCCTCCCTGCACCGCTTGACCCCTGA...GGACGGACGAGGGCACCCACTGTGCATCACTAAGGCCCTGTCCCTTCCTGGGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 |
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| 3UTR-3UTR GCA 90 bp | CAGCGGCCCCCAGGAAGGGACAGGGCCTTAGTGATGCACAGTGGGTGCCCTCGTCTAGGGGCTGCCCAGTaGCCTCCCGAGTCCTTGGGC | + |
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Preference number: 2 (lower is better) Translates to: QRPPGRDRALVMHSGCPRLGAAQ*PPESLG Trigger: GCCCAAGGACTCGGGAGGGCACTGGGCAGCCCCTAG...ACGAGGGCACCCACTGTGCATCACTAAGGCCCTGTCCCTTCCTGGGGGCCGCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCCCAGTGCCCTCCCGAGTCCTTGGGCTTTATTGATGCAGCGGCCCCCAGGACAGGCTCGGGAGCTCTaGGCTAGGGGCTGCCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: LPSALPSPWALLMQRPPGQAREL*ARGCPV Trigger: CACTGGGCAGCCCCTAGCTCAGAGCTCCCGAGCCTG...TCCTGGGGGCCGCTGCATCAATAAAGCCCAAGGACTCGGGAGGGCACTGGGCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| 3UTR-3UTR TCA 90 bp | CCCAGTGCCCTCCCGAGTCCTTGGGCTTTATTGATGCAGCGGCCCCCAGGAAGGCAGGCTCGGGAGCTCTaGGCTAGGGGCTGCCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: PSALPSPWALLMQRPPGRQAREL*ARGCPV Trigger: CACTGGGCAGCCCCTAGCTCAGAGCTCCCGAGCCTG...CCTTCCTGGGGGCCGCTGCATCAATAAAGCCCAAGGACTCGGGAGGGCACTGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCCCGAGTCCTTGGGCTTTATTGATGCAGCGGCCCCCAGGAAGGGACAGGGCCTAGGGGCTGCCCAGTaGCCTCCCGAGTCCTTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: PPESLGFIDAAAPRKGQGLGAAQ*PPESLG Trigger: GCCCAAGGACTCGGGAGGGCACTGGGCAGCCCCTAG...GCCCTGTCCCTTCCTGGGGGCCGCTGCATCAATAAAGCCCAAGGACTCGGGAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCCCAGTGCCCTCCCGAGTCCTTGGGCTTTATTGATGCAGCGGCCCCCAGGACTAGGGGCTGCCCAGTaGCCTCCCGAGTCCTTGGGC | + |
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Preference number: 2 (lower is better) Translates to: LPSALPSPWALLMQRPPGLGAAQ*PPESLG Trigger: GCCCAAGGACTCGGGAGGGCACTGGGCAGCCCCTAG...TCCTGGGGGCCGCTGCATCAATAAAGCCCAAGGACTCGGGAGGGCACTGGGCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGGAGGCCGAGGGCCGCAGTGGCTCTGCAAGGGGCCTGGCAAGGAGCAGCGGGTCCGTCCGTCCTGGTaGTATAGGGAACCTGAGACT | + |
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Preference number: 2 (lower is better) Translates to: QGGRGPQWLCKGPGKEQRVRPSW*YREPET Trigger: AGTCTCAGGTTCCCTATACCACCAGGACGGACGGAC...CCGCTGCTCCTTGCCAGGCCCCTTGCAGAGCCACTGCGGCCCTCGGCCTCCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 |
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| 3UTR CAA 90 bp | CTCGGGAGCTCTGAGCTAGGGGCTGCCCAGTGCCCTCCCGAGTCCTaGGGCTTTATTGATGCAGCGGCCCCCAGGAAGGGACAGGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: LGSSELGAAQCPPES*GFIDAAAPRKGQGL Trigger: AAGGCCCTGTCCCTTCCTGGGGGCCGCTGCATCAATAAAGCCCAAGGACTCGGGAGGGCACTGGGCAGCCCCTAGCTCAGAGCTCCCGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCCAGGAAGGGACAGGGCCTTAGTGATGCACAGTGGGTGCCCTCGTCCGTCCCGCCAGAGGTCCCAGTaGCTGGAGACAGTCGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: PPGRDRALVMHSGCPRPSRQRSQ*LETVAQ Trigger: CTGAGCGACTGTCTCCAGTCACTGGGACCTCTGGCG...GGACGGACGAGGGCACCCACTGTGCATCACTAAGGCCCTGTCCCTTCCTGGGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 |
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| 3UTR-3UTR CCA 90 bp | GAACTCTGTGGAGGCTGGAGGAACCTCTTGGAGCGCTACCGTGGCCAGCTGTCAGGGAGGCCCCTCGGCTaGGGGGACCCTCCTTGCACA | + |
|
Preference number: 2 (lower is better) Translates to: ELCGGWRNLLERYRGQLSGRPLG*GDPPCT Trigger: TGTGCAAGGAGGGTCCCCCCAGCCGAGGGGCCTCCC...TGACAGCTGGCCACGGTAGCGCTCCAAGAGGTTCCTCCAGCCTCCACAGAGTTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 |
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| 3UTR-3UTR TCA 90 bp | CGGCCCCCAGGAAGGGACAGGGCCTTAGTGATGCACAGTGGGTGCCCTCGTCCGGTCCTTGGGCTTTATTaGTGCAGCGGCCCCCAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: RPPGRDRALVMHSGCPRPVLGLY*CSGPQE Trigger: TTCCTGGGGGCCGCTGCATCAATAAAGCCCAAGGAC...CGGACGAGGGCACCCACTGTGCATCACTAAGGCCCTGTCCCTTCCTGGGGGCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| 3UTR-3UTR CCA 90 bp | CCCAGTGCCCTCCCGAGTCCTTGGGCTTTATTGATGCAGCGGCCCCCAGGAAGGGGTAGGGGAAGGACCTaGGGAAGTCGCCAGAGGTCC | + |
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Preference number: 2 (lower is better) Translates to: PSALPSPWALLMQRPPGRGRGRT*GSRQRS Trigger: GGACCTCTGGCGACTTCCCCAGGTCCTTCCCCTACC...CCTTCCTGGGGGCCGCTGCATCAATAAAGCCCAAGGACTCGGGAGGGCACTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 |
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| 3UTR-3UTR CCA 90 bp | CCCCCAGGAAGGGACAGGGCCTTAGTGATGCACAGTGGGTGCCCTCGTCCGTCCGCCCTCCCGAGTCCTTaGGCTTTATTGATGCAGCGG | + |
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Preference number: 2 (lower is better) Translates to: PPGRDRALVMHSGCPRPSALPSP*ALLMQR Trigger: CCGCTGCATCAATAAAGCCCAAGGACTCGGGAGGGC...GGACGGACGAGGGCACCCACTGTGCATCACTAAGGCCCTGTCCCTTCCTGGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCGGCCCCCAGGAAGGGACAGGGCCTTAGTGATGCACAGTGGGTGCCCTCGTGCCCTCCCGAGTCCTTaGGCTTTATTGATGCAGCGG | + |
|
Preference number: 2 (lower is better) Translates to: QRPPGRDRALVMHSGCPRALPSP*ALLMQR Trigger: CCGCTGCATCAATAAAGCCCAAGGACTCGGGAGGGC...ACGAGGGCACCCACTGTGCATCACTAAGGCCCTGTCCCTTCCTGGGGGCCGCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTGTGGAGGCTGGAGGAACCTCTTGGAGCGCTACCGTGGCCAGCTGTCAGGGGCCCTCCCGAGTCCTTaGGCTTTATTGATGCAGCGG | + |
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Preference number: 2 (lower is better) Translates to: LCGGWRNLLERYRGQLSGALPSP*ALLMQR Trigger: CCGCTGCATCAATAAAGCCCAAGGACTCGGGAGGGC...CCCTGACAGCTGGCCACGGTAGCGCTCCAAGAGGTTCCTCCAGCCTCCACAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 |
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| 3UTR-3UTR CCA 90 bp | CCTCCCGAGTCCTTGGGCTTTATTGATGCAGCGGCCCCCAGGAAGGGACAGGGCGCCCTCCCGAGTCCTTaGGCTTTATTGATGCAGCGG | + |
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Preference number: 2 (lower is better) Translates to: PPESLGFIDAAAPRKGQGALPSP*ALLMQR Trigger: CCGCTGCATCAATAAAGCCCAAGGACTCGGGAGGGC...GCCCTGTCCCTTCCTGGGGGCCGCTGCATCAATAAAGCCCAAGGACTCGGGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCCAGGAAGGGACAGGGCCTTAGTGATGCACAGTGGGTGCCCTCGTCCGTCCACTTCGGGAACTCTGTaGAGGCTGGAGGAACCTCTT | + |
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Preference number: 2 (lower is better) Translates to: PPGRDRALVMHSGCPRPSTSGTL*RLEEPL Trigger: AAGAGGTTCCTCCAGCCTCCACAGAGTTCCCGAAGT...GGACGGACGAGGGCACCCACTGTGCATCACTAAGGCCCTGTCCCTTCCTGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGGTGCCCTCGTCCGTCCGTCCTGGTGGTATAGGGAACCTGAGACTTCGGGAGTCCGTCCGTCCTGGTaGTATAGGGAACCTGAGACT | + |
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Preference number: 2 (lower is better) Translates to: VGALVRPSWWYREPETSGVRPSW*YREPET Trigger: AGTCTCAGGTTCCCTATACCACCAGGACGGACGGAC...TCCCGAAGTCTCAGGTTCCCTATACCACCAGGACGGACGGACGAGGGCACCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| 3UTR-3UTR CCA 90 bp | GCCCTCGTCCGTCCGTCCTGGTGGTATAGGGAACCTGAGACTTCGGGAACTCTGGCCCTCCCGAGTCCTTaGGCTTTATTGATGCAGCGG | + |
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Preference number: 2 (lower is better) Translates to: ALVRPSWWYREPETSGTLALPSP*ALLMQR Trigger: CCGCTGCATCAATAAAGCCCAAGGACTCGGGAGGGC...CAGAGTTCCCGAAGTCTCAGGTTCCCTATACCACCAGGACGGACGGACGAGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTGTGGAGGCTGGAGGAACCTCTTGGAGCGCTACCGTGGCCAGCTGTCAGGGAGAGGTCCCAGTGACTaGAGACAGTCGCTCAGACTT | + |
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Preference number: 2 (lower is better) Translates to: LCGGWRNLLERYRGQLSGRGPSD*RQSLRL Trigger: AAGTCTGAGCGACTGTCTCCAGTCACTGGGACCTCT...CCCTGACAGCTGGCCACGGTAGCGCTCCAAGAGGTTCCTCCAGCCTCCACAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 |
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| 3UTR-3UTR TCA 90 bp | AGGGAACCTGAGACTTCGGGAACTCTGTGGAGGCTGGAGGAACCTCTTGGAGCGGTCCTTGGGCTTTATTaGTGCAGCGGCCCCCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: REPETSGTLWRLEEPLGAVLGLY*CSGPQE Trigger: TTCCTGGGGGCCGCTGCATCAATAAAGCCCAAGGAC...CGCTCCAAGAGGTTCCTCCAGCCTCCACAGAGTTCCCGAAGTCTCAGGTTCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| 3UTR-3UTR CCA 90 bp | GTGACTGGAGACAGTCGCTCAGACTTGATGCTGACCGGAGGTGTCGGAGGGGAGACTTCGGGAACTCTGTaGAGGCTGGAGGAACCTCTT | + |
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Preference number: 2 (lower is better) Translates to: VTGDSRSDLMLTGGVGGETSGTL*RLEEPL Trigger: AAGAGGTTCCTCCAGCCTCCACAGAGTTCCCGAAGT...CTCCCCTCCGACACCTCCGGTCAGCATCAAGTCTGAGCGACTGTCTCCAGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 |
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| 3UTR-3UTR CCA 90 bp | TGGGCTTTATTGATGCAGCGGCCCCCAGGAAGGGACAGGGCCTTAGTGATGCACACTTCGGGAACTCTGTaGAGGCTGGAGGAACCTCTT | + |
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Preference number: 2 (lower is better) Translates to: WALLMQRPPGRDRALVMHTSGTL*RLEEPL Trigger: AAGAGGTTCCTCCAGCCTCCACAGAGTTCCCGAAGT...GTGCATCACTAAGGCCCTGTCCCTTCCTGGGGGCCGCTGCATCAATAAAGCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| 3UTR GCA 72 bp | CAAGCGGTGCAGGGAGGCCGAGGGCCGCAGTGGCTCTaGAAGGGGCCTGGCAAGGAGCAGCGGGTAGGGGAA | + |
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Preference number: 3 (lower is better) Translates to: QAVQGGRGPQWL*KGPGKEQRVGE Trigger: TTCCCCTACCCGCTGCTCCTTGCCAGGCCCCTTGCAGAGCCACTGCGGCCCTCGGCCTCCCTGCACCGCTTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 |
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| 3UTR GCA 72 bp | GAGCGCTACCGTGGCCAGCTGTCAGGGGTCAAGCGGTaGAGGGAGGCCGAGGGCCGCAGTGGCTCTGCAAGG | + |
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Preference number: 3 (lower is better) Translates to: ERYRGQLSGVKR*REAEGRSGSAR Trigger: CCTTGCAGAGCCACTGCGGCCCTCGGCCTCCCTGCACCGCTTGACCCCTGACAGCTGGCCACGGTAGCGCTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 |
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| 3UTR CCA 72 bp | CTGTGGAGGCTGGAGGAACCTCTTGGAGCGCTACCGTaGCCAGCTGTCAGGGGTCAAGCGGTGCAGGGAGGC | + |
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Preference number: 3 (lower is better) Translates to: LWRLEEPLGALP*PAVRGQAVQGG Trigger: GCCTCCCTGCACCGCTTGACCCCTGACAGCTGGCCACGGTAGCGCTCCAAGAGGTTCCTCCAGCCTCCACAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 |
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| 3UTR CCA 72 bp | GCCCCCAGGAAGGGACAGGGCCTTAGTGATGCACAGTaGGTGCCCTCGTCCGTCCGTCCTGGTGGTATAGGG | + |
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Preference number: 3 (lower is better) Translates to: APRKGQGLSDAQ*VPSSVRPGGIG Trigger: CCCTATACCACCAGGACGGACGGACGAGGGCACCCACTGTGCATCACTAAGGCCCTGTCCCTTCCTGGGGGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| 3UTR CCA 72 bp | GACTTCGGGAACTCTGTGGAGGCTGGAGGAACCTCTTaGAGCGCTACCGTGGCCAGCTGTCAGGGGTCAAGC | + |
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Preference number: 3 (lower is better) Translates to: DFGNSVEAGGTS*SATVASCQGSS Trigger: GCTTGACCCCTGACAGCTGGCCACGGTAGCGCTCCAAGAGGTTCCTCCAGCCTCCACAGAGTTCCCGAAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 |
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| 3UTR CCA 72 bp | TGGTGGTATAGGGAACCTGAGACTTCGGGAACTCTGTaGAGGCTGGAGGAACCTCTTGGAGCGCTACCGTGG | + |
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Preference number: 3 (lower is better) Translates to: WWYREPETSGTL*RLEEPLGALPW Trigger: CCACGGTAGCGCTCCAAGAGGTTCCTCCAGCCTCCACAGAGTTCCCGAAGTCTCAGGTTCCCTATACCACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 |
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| CDS-3UTR GCA 90 bp | GCGGCCCCCAGGAAGGGACAGGGCCTTAGTGATGCACAGTGGGTGCCCTCGTCCTCAGGGGTCAAGCGGTaGAGGGAGGCCGAGGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: AAPRKGQGLSDAQWVPSSSGVKR*REAEGR Trigger: GCGGCCCTCGGCCTCCCTGCACCGCTTGACCCCTGA...GGACGAGGGCACCCACTGTGCATCACTAAGGCCCTGTCCCTTCCTGGGGGCCGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| CDS-3UTR GCA 90 bp | GCGGCCCCCAGGAAGGGACAGGGCCTTAGTGATGCACAGTGGGTGCCCTCGTCCGGGGCACCGGGACTCTaGAGGCCGCTGTACAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: AAPRKGQGLSDAQWVPSSGAPGL*RPLYRL Trigger: AAGCCTGTACAGCGGCCTGCAGAGTCCCGGTGCCCC...GGACGAGGGCACCCACTGTGCATCACTAAGGCCCTGTCCCTTCCTGGGGGCCGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| CDS-3UTR GCA 90 bp | GCCCAGTGCCCTCCCGAGTCCTTGGGCTTTATTGATGCAGCGGCCCCCAGGAAGTCAGGGGTCAAGCGGTaGAGGGAGGCCGAGGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: AQCPPESLGFIDAAAPRKSGVKR*REAEGR Trigger: GCGGCCCTCGGCCTCCCTGCACCGCTTGACCCCTGA...CTTCCTGGGGGCCGCTGCATCAATAAAGCCCAAGGACTCGGGAGGGCACTGGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| CDS-3UTR TCA 90 bp | CGGCCCCCAGGAAGGGACAGGGCCTTAGTGATGCACAGTGGGTGCCCTCGTCCGCGCCAGAGGTCCCAGTaGCTGGAGACAGTCGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: RPPGRDRALVMHSGCPRPRQRSQ*LETVAQ Trigger: CTGAGCGACTGTCTCCAGTCACTGGGACCTCTGGCG...CGGACGAGGGCACCCACTGTGCATCACTAAGGCCCTGTCCCTTCCTGGGGGCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| CDS-3UTR CCA 90 bp | CGGCCCCCAGGAAGGGACAGGGCCTTAGTGATGCACAGTGGGTGCCCTCGTCCGGATCACAGCCTGGAGTaGCTGGTGGGACCCGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: RPPGRDRALVMHSGCPRPDHSLE*LVGPGR Trigger: CCTACCGGGTCCCACCAGCCACTCCAGGCTGTGATC...CGGACGAGGGCACCCACTGTGCATCACTAAGGCCCTGTCCCTTCCTGGGGGCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| CDS-3UTR CCA 90 bp | CCCCCAGGAAGGGACAGGGCCTTAGTGATGCACAGTGGGTGCCCTCGTCCGTCCGCCAGGATCACAGCCTaGAGTGGCTGGTGGGACCCG | + |
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Preference number: 4 (lower is better) Translates to: PPGRDRALVMHSGCPRPSARITA*SGWWDP Trigger: CGGGTCCCACCAGCCACTCCAGGCTGTGATCCTGGC...GGACGGACGAGGGCACCCACTGTGCATCACTAAGGCCCTGTCCCTTCCTGGGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| CDS-3UTR CCA 90 bp | TCAGGGGTCAAGCGGTGCAGGGAGGCCGAGGGCCGCAGTGGCTCTGCAAGGGGCGCTCGCAAGGTGGCTTaGAGAGAAGATCGGGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: SGVKRCREAEGRSGSARGARKVA*REDRVS Trigger: GGACACCCGATCTTCTCTCCAAGCCACCTTGCGAGC...GCCCCTTGCAGAGCCACTGCGGCCCTCGGCCTCCCTGCACCGCTTGACCCCTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 |
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| CDS-3UTR CCA 90 bp | AAGGGACAGGGCCTTAGTGATGCACAGTGGGTGCCCTCGTCCGTCCGTCCTGGTGGGAGGCCCCTCGGCTaGGGGGACCCTCCTTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: KGQGLSDAQWVPSSVRPGGRPLG*GDPPCT Trigger: TGTGCAAGGAGGGTCCCCCCAGCCGAGGGGCCTCCC...ACCAGGACGGACGGACGAGGGCACCCACTGTGCATCACTAAGGCCCTGTCCCTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR TCA 90 bp | CAGTGCCCTCCCGAGTCCTTGGGCTTTATTGATGCAGCGGCCCCCAGGAAGGGACGTTGGTGGCCAGGGTaGGGGTTGCAGGGGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QCPPESLGFIDAAAPRKGRWWPG*GLQGSL Trigger: CAGGGACCCCTGCAACCCTCACCCTGGCCACCAACG...TCCCTTCCTGGGGGCCGCTGCATCAATAAAGCCCAAGGACTCGGGAGGGCACTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR TCA 90 bp | GTGGGTGCCCTCGTCCGTCCGTCCTGGTGGTATAGGGAACCTGAGACTTCGGGACGTTGGTGGCCAGGGTaGGGGTTGCAGGGGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VGALVRPSWWYREPETSGRWWPG*GLQGSL Trigger: CAGGGACCCCTGCAACCCTCACCCTGGCCACCAACG...TCCCGAAGTCTCAGGTTCCCTATACCACCAGGACGGACGGACGAGGGCACCCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR GCA 90 bp | GCGGCCCCCAGGAAGGGACAGGGCCTTAGTGATGCACAGTGGGTGCCCTCGTCCCCCGGTCCATGTCGCTaGTCGCATACTGGAAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AAPRKGQGLSDAQWVPSSPGPCR*SHTGRG Trigger: GCCTCTTCCAGTATGCGAGCAGCGACATGGACCGGG...GGACGAGGGCACCCACTGTGCATCACTAAGGCCCTGTCCCTTCCTGGGGGCCGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR GCA 90 bp | CGGCCCCCAGGAAGGGACAGGGCCTTAGTGATGCACAGTGGGTGCCCTCGTCCGACAGGCTTCTTGAGGTaGCCAATCCCCCTCGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RPPGRDRALVMHSGCPRPTGFLR*PIPLGH Trigger: GTGCCCGAGGGGGATTGGGCACCTCAAGAAGCCTGT...CGGACGAGGGCACCCACTGTGCATCACTAAGGCCCTGTCCCTTCCTGGGGGCCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR GCA 90 bp | GCGGCCCCCAGGAAGGGACAGGGCCTTAGTGATGCACAGTGGGTGCCCTCGTCCACAGGCTTCTTGAGGTaGCCAATCCCCCTCGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: AAPRKGQGLSDAQWVPSSTGFLR*PIPLGH Trigger: GTGCCCGAGGGGGATTGGGCACCTCAAGAAGCCTGT...GGACGAGGGCACCCACTGTGCATCACTAAGGCCCTGTCCCTTCCTGGGGGCCGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| 3UTR CAA 72 bp | GGGCTGCCCAGTGCCCTCCCGAGTCCTTGGGCTTTATaGATGCAGCGGCCCCCAGGAAGGGACAGGGCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: GLPSALPSPWAL*MQRPPGRDRAL Trigger: TAAGGCCCTGTCCCTTCCTGGGGGCCGCTGCATCAATAAAGCCCAAGGACTCGGGAGGGCACTGGGCAGCCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR TCA 90 bp | CGCTCAGACTTGATGCTGACCGGAGGTGTCGGAGGGGAGGCCCCTCGGCTGGGGCGAACTTGCGCTTGGTaGAAGTCACCTGCCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RSDLMLTGGVGGEAPRLGRTCAW*KSPACS Trigger: GGAACAGGCAGGTGACTTTCACCAAGCGCAAGTTCG...CCCCAGCCGAGGGGCCTCCCCTCCGACACCTCCGGTCAGCATCAAGTCTGAGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 |
||
| CDS-3UTR TCA 90 bp | CCTCCCGAGTCCTTGGGCTTTATTGATGCAGCGGCCCCCAGGAAGGGACAGGGCCGCCAGAGGTCCCAGTaGCTGGAGACAGTCGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PPESLGFIDAAAPRKGQGRQRSQ*LETVAQ Trigger: CTGAGCGACTGTCTCCAGTCACTGGGACCTCTGGCG...GCCCTGTCCCTTCCTGGGGGCCGCTGCATCAATAAAGCCCAAGGACTCGGGAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR GCA 90 bp | AGTGCCCTCCCGAGTCCTTGGGCTTTATTGATGCAGCGGCCCCCAGGAAGGGACGGGGCACCGGGACTCTaGAGGCCGCTGTACAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SALPSPWALLMQRPPGRDGAPGL*RPLYRL Trigger: AAGCCTGTACAGCGGCCTGCAGAGTCCCGGTGCCCC...GTCCCTTCCTGGGGGCCGCTGCATCAATAAAGCCCAAGGACTCGGGAGGGCACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR GCA 90 bp | TGGGCTTTATTGATGCAGCGGCCCCCAGGAAGGGACAGGGCCTTAGTGATGCACTCAGGGGTCAAGCGGTaGAGGGAGGCCGAGGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: WALLMQRPPGRDRALVMHSGVKR*REAEGR Trigger: GCGGCCCTCGGCCTCCCTGCACCGCTTGACCCCTGA...GTGCATCACTAAGGCCCTGTCCCTTCCTGGGGGCCGCTGCATCAATAAAGCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR CCA 90 bp | CGGCCCCCAGGAAGGGACAGGGCCTTAGTGATGCACAGTGGGTGCCCTCGTCCGCTCTCCAGGACCTTCTaGCCCCTCCTCCATATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RPPGRDRALVMHSGCPRPLSRTF*PLLHIQ Trigger: CTGGATATGGAGGAGGGGCCAGAAGGTCCTGGAGAG...CGGACGAGGGCACCCACTGTGCATCACTAAGGCCCTGTCCCTTCCTGGGGGCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGCCCTCCCGAGTCCTTGGGCTTTATTGATGCAGCGGCCCCCAGGAAGGGAGCCAGGATCACAGCCTaGAGTGGCTGGTGGGACCCG | + |
|
Preference number: 4 (lower is better) Translates to: QCPPESLGFIDAAAPRKGARITA*SGWWDP Trigger: CGGGTCCCACCAGCCACTCCAGGCTGTGATCCTGGC...TCCCTTCCTGGGGGCCGCTGCATCAATAAAGCCCAAGGACTCGGGAGGGCACTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR CCA 90 bp | TCCGTCCGTCCTGGTGGTATAGGGAACCTGAGACTTCGGGAACTCTGTGGAGGCGGGAGGCCCCTCGGCTaGGGGGACCCTCCTTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SVRPGGIGNLRLRELCGGGRPLG*GDPPCT Trigger: TGTGCAAGGAGGGTCCCCCCAGCCGAGGGGCCTCCC...GCCTCCACAGAGTTCCCGAAGTCTCAGGTTCCCTATACCACCAGGACGGACGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| 3UTR CAA 72 bp | CCAGAGGTCCCAGTGACTGGAGACAGTCGCTCAGACTaGATGCTGACCGGAGGTGTCGGAGGGGAGGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PEVPVTGDSRSD*MLTGGVGGEAP Trigger: AGGGGCCTCCCCTCCGACACCTCCGGTCAGCATCAAGTCTGAGCGACTGTCTCCAGTCACTGGGACCTCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 |
||
| CDS-3UTR TCA 90 bp | AGGGAACCTGAGACTTCGGGAACTCTGTGGAGGCTGGAGGAACCTCTTGGAGCGCGTTGGTGGCCAGGGTaGGGGTTGCAGGGGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: REPETSGTLWRLEEPLGARWWPG*GLQGSL Trigger: CAGGGACCCCTGCAACCCTCACCCTGGCCACCAACG...CGCTCCAAGAGGTTCCTCCAGCCTCCACAGAGTTCCCGAAGTCTCAGGTTCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR TCA 90 bp | CAGTGCCCTCCCGAGTCCTTGGGCTTTATTGATGCAGCGGCCCCCAGGAAGGGACGCCAGAGGTCCCAGTaGCTGGAGACAGTCGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QCPPESLGFIDAAAPRKGRQRSQ*LETVAQ Trigger: CTGAGCGACTGTCTCCAGTCACTGGGACCTCTGGCG...TCCCTTCCTGGGGGCCGCTGCATCAATAAAGCCCAAGGACTCGGGAGGGCACTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR GCA 90 bp | ATTGATGCAGCGGCCCCCAGGAAGGGACAGGGCCTTAGTGATGCACAGTGGGTGGGGGCACCGGGACTCTaGAGGCCGCTGTACAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: IDAAAPRKGQGLSDAQWVGAPGL*RPLYRL Trigger: AAGCCTGTACAGCGGCCTGCAGAGTCCCGGTGCCCC...CACCCACTGTGCATCACTAAGGCCCTGTCCCTTCCTGGGGGCCGCTGCATCAAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGCCCTCCCGAGTCCTTGGGCTTTATTGATGCAGCGGCCCCCAGGAAGGGAGATCACAGCCTGGAGTaGCTGGTGGGACCCGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: QCPPESLGFIDAAAPRKGDHSLE*LVGPGR Trigger: CCTACCGGGTCCCACCAGCCACTCCAGGCTGTGATC...TCCCTTCCTGGGGGCCGCTGCATCAATAAAGCCCAAGGACTCGGGAGGGCACTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR CCA 90 bp | CCCCCAGGAAGGGACAGGGCCTTAGTGATGCACAGTGGGTGCCCTCGTCCGTCCGCTCGCAAGGTGGCTTaGAGAGAAGATCGGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PPGRDRALVMHSGCPRPSARKVA*REDRVS Trigger: GGACACCCGATCTTCTCTCCAAGCCACCTTGCGAGC...GGACGGACGAGGGCACCCACTGTGCATCACTAAGGCCCTGTCCCTTCCTGGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| CDS-3UTR CCA 90 bp | AAGGGACAGGGCCTTAGTGATGCACAGTGGGTGCCCTCGTCCGTCCGTCCTGGTGGTAGGGGAAGGACCTaGGGAAGTCGCCAGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KGQGLSDAQWVPSSVRPGGRGRT*GSRQRS Trigger: GGACCTCTGGCGACTTCCCCAGGTCCTTCCCCTACC...ACCAGGACGGACGGACGAGGGCACCCACTGTGCATCACTAAGGCCCTGTCCCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR TCA 90 bp | CAGCGGCCCCCAGGAAGGGACAGGGCCTTAGTGATGCACAGTGGGTGCCCTCGTCGAACTTGCGCTTGGTaGAAGTCACCTGCCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QRPPGRDRALVMHSGCPRRTCAW*KSPACS Trigger: GGAACAGGCAGGTGACTTTCACCAAGCGCAAGTTCG...ACGAGGGCACCCACTGTGCATCACTAAGGCCCTGTCCCTTCCTGGGGGCCGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| CDS-3UTR TCA 90 bp | CGGCCCCCAGGAAGGGACAGGGCCTTAGTGATGCACAGTGGGTGCCCTCGTCCGCTCCTCTTCAGTGTCTaGAGGATATCCGCGTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RPPGRDRALVMHSGCPRPLLFSV*RISALV Trigger: CACCAACGCGGATATCCTTCAGACACTGAAGAGGAG...CGGACGAGGGCACCCACTGTGCATCACTAAGGCCCTGTCCCTTCCTGGGGGCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR TCA 90 bp | TCCTTGGGCTTTATTGATGCAGCGGCCCCCAGGAAGGGACAGGGCCTTAGTGATCGTTGGTGGCCAGGGTaGGGGTTGCAGGGGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLGFIDAAAPRKGQGLSDRWWPG*GLQGSL Trigger: CAGGGACCCCTGCAACCCTCACCCTGGCCACCAACG...ATCACTAAGGCCCTGTCCCTTCCTGGGGGCCGCTGCATCAATAAAGCCCAAGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| CDS-3UTR CCA 90 bp | CCCAGTGCCCTCCCGAGTCCTTGGGCTTTATTGATGCAGCGGCCCCCAGGAAGGCTCTCCAGGACCTTCTaGCCCCTCCTCCATATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSALPSPWALLMQRPPGRLSRTF*PLLHIQ Trigger: CTGGATATGGAGGAGGGGCCAGAAGGTCCTGGAGAG...CCTTCCTGGGGGCCGCTGCATCAATAAAGCCCAAGGACTCGGGAGGGCACTGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| CDS-3UTR CCA 90 bp | GGGGAAGTCGCCAGAGGTCCCAGTGACTGGAGACAGTCGCTCAGACTTGATGCTGCCAGGATCACAGCCTaGAGTGGCTGGTGGGACCCG | + |
|
Preference number: 4 (lower is better) Translates to: GEVARGPSDWRQSLRLDAARITA*SGWWDP Trigger: CGGGTCCCACCAGCCACTCCAGGCTGTGATCCTGGC...AGCATCAAGTCTGAGCGACTGTCTCCAGTCACTGGGACCTCTGGCGACTTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 |
||
| CDS-3UTR CCA 90 bp | CCGTCCTGGTGGTATAGGGAACCTGAGACTTCGGGAACTCTGTGGAGGCTGGAGGCCAGGATCACAGCCTaGAGTGGCTGGTGGGACCCG | + |
|
Preference number: 4 (lower is better) Translates to: PSWWYREPETSGTLWRLEARITA*SGWWDP Trigger: CGGGTCCCACCAGCCACTCCAGGCTGTGATCCTGGC...CTCCAGCCTCCACAGAGTTCCCGAAGTCTCAGGTTCCCTATACCACCAGGACGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| CDS-3UTR CCA 90 bp | CCTCCCGAGTCCTTGGGCTTTATTGATGCAGCGGCCCCCAGGAAGGGACAGGGCGCTCGCAAGGTGGCTTaGAGAGAAGATCGGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PPESLGFIDAAAPRKGQGARKVA*REDRVS Trigger: GGACACCCGATCTTCTCTCCAAGCCACCTTGCGAGC...GCCCTGTCCCTTCCTGGGGGCCGCTGCATCAATAAAGCCCAAGGACTCGGGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR CCA 90 bp | ATTGATGCAGCGGCCCCCAGGAAGGGACAGGGCCTTAGTGATGCACAGTGGGTGGGTAGGGGAAGGACCTaGGGAAGTCGCCAGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: IDAAAPRKGQGLSDAQWVGRGRT*GSRQRS Trigger: GGACCTCTGGCGACTTCCCCAGGTCCTTCCCCTACC...CACCCACTGTGCATCACTAAGGCCCTGTCCCTTCCTGGGGGCCGCTGCATCAAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR TCA 90 bp | AGACAGTCGCTCAGACTTGATGCTGACCGGAGGTGTCGGAGGGGAGGCCCCTCGCGAACTTGCGCTTGGTaGAAGTCACCTGCCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RQSLRLDADRRCRRGGPSRTCAW*KSPACS Trigger: GGAACAGGCAGGTGACTTTCACCAAGCGCAAGTTCG...CGAGGGGCCTCCCCTCCGACACCTCCGGTCAGCATCAAGTCTGAGCGACTGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 |
||
| CDS-3UTR GCA 90 bp | TGCAGGGAGGCCGAGGGCCGCAGTGGCTCTGCAAGGGGCCTGGCAAGGAGCAGCTTGGTGAAAGTCACCTaGCTGTTCCTTTGGTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: CREAEGRSGSARGLARSSLVKVT*LFLWSR Trigger: TCTAGACCAAAGGAACAGGCAGGTGACTTTCACCAA...GCTGCTCCTTGCCAGGCCCCTTGCAGAGCCACTGCGGCCCTCGGCCTCCCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 |
||
| CDS-3UTR CCA 90 bp | GTCCGTCCGTCCTGGTGGTATAGGGAACCTGAGACTTCGGGAACTCTGTGGAGGGGTAGGGGAAGGACCTaGGGAAGTCGCCAGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VRPSWWYREPETSGTLWRGRGRT*GSRQRS Trigger: GGACCTCTGGCGACTTCCCCAGGTCCTTCCCCTACC...CCTCCACAGAGTTCCCGAAGTCTCAGGTTCCCTATACCACCAGGACGGACGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| 3UTR CAA 72 bp | AGACTTCGGGAACTCTGTGGAGGCTGGAGGAACCTCTaGGAGCGCTACCGTGGCCAGCTGTCAGGGGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RLRELCGGWRNL*ERYRGQLSGVK Trigger: CTTGACCCCTGACAGCTGGCCACGGTAGCGCTCCAAGAGGTTCCTCCAGCCTCCACAGAGTTCCCGAAGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 |
||
| CDS-3UTR GCA 90 bp | AGTCCTTGGGCTTTATTGATGCAGCGGCCCCCAGGAAGGGACAGGGCCTTAGTGCCCGGTCCATGTCGCTaGTCGCATACTGGAAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SPWALLMQRPPGRDRALVPGPCR*SHTGRG Trigger: GCCTCTTCCAGTATGCGAGCAGCGACATGGACCGGG...CACTAAGGCCCTGTCCCTTCCTGGGGGCCGCTGCATCAATAAAGCCCAAGGACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGAGGTCCCAGTGACTGGAGACAGTCGCTCAGACTTGATGCTGACCGGAGGCTCTCCAGGACCTTCTaGCCCCTCCTCCATATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ARGPSDWRQSLRLDADRRLSRTF*PLLHIQ Trigger: CTGGATATGGAGGAGGGGCCAGAAGGTCCTGGAGAG...CCTCCGGTCAGCATCAAGTCTGAGCGACTGTCTCCAGTCACTGGGACCTCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 |
||
| CDS-3UTR CCA 90 bp | TCGTCCGTCCGTCCTGGTGGTATAGGGAACCTGAGACTTCGGGAACTCTGTGGAGATCACAGCCTGGAGTaGCTGGTGGGACCCGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSVRPGGIGNLRLRELCGDHSLE*LVGPGR Trigger: CCTACCGGGTCCCACCAGCCACTCCAGGCTGTGATC...TCCACAGAGTTCCCGAAGTCTCAGGTTCCCTATACCACCAGGACGGACGGACGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR CCA 90 bp | TTGGGCTTTATTGATGCAGCGGCCCCCAGGAAGGGACAGGGCCTTAGTGATGCAGATCACAGCCTGGAGTaGCTGGTGGGACCCGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LGFIDAAAPRKGQGLSDADHSLE*LVGPGR Trigger: CCTACCGGGTCCCACCAGCCACTCCAGGCTGTGATC...TGCATCACTAAGGCCCTGTCCCTTCCTGGGGGCCGCTGCATCAATAAAGCCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR CCA 90 bp | CCCAGTGCCCTCCCGAGTCCTTGGGCTTTATTGATGCAGCGGCCCCCAGGAAGGAGAGGTCCCAGTGACTaGAGACAGTCGCTCAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: PSALPSPWALLMQRPPGRRGPSD*RQSLRL Trigger: AAGTCTGAGCGACTGTCTCCAGTCACTGGGACCTCT...CCTTCCTGGGGGCCGCTGCATCAATAAAGCCCAAGGACTCGGGAGGGCACTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR TCA 90 bp | CAGTGCCCTCCCGAGTCCTTGGGCTTTATTGATGCAGCGGCCCCCAGGAAGGGACTCCTCTTCAGTGTCTaGAGGATATCCGCGTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QCPPESLGFIDAAAPRKGLLFSV*RISALV Trigger: CACCAACGCGGATATCCTTCAGACACTGAAGAGGAG...TCCCTTCCTGGGGGCCGCTGCATCAATAAAGCCCAAGGACTCGGGAGGGCACTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR TCA 90 bp | AGTGCCCTCCCGAGTCCTTGGGCTTTATTGATGCAGCGGCCCCCAGGAAGGGACCTCCTCTTCAGTGTCTaGAGGATATCCGCGTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SALPSPWALLMQRPPGRDLLFSV*RISALV Trigger: CACCAACGCGGATATCCTTCAGACACTGAAGAGGAG...GTCCCTTCCTGGGGGCCGCTGCATCAATAAAGCCCAAGGACTCGGGAGGGCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR GCA 90 bp | TGGAGACAGTCGCTCAGACTTGATGCTGACCGGAGGTGTCGGAGGGGAGGCCCCTACTGGAAGAGGCGTTaGGCGCTGTTGAAGATGATC | + |
|
Preference number: 4 (lower is better) Translates to: WRQSLRLDADRRCRRGGPYWKRR*ALLKMI Trigger: GATCATCTTCAACAGCGCGCAACGCCTCTTCCAGTA...GGGGCCTCCCCTCCGACACCTCCGGTCAGCATCAAGTCTGAGCGACTGTCTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 |
||
| CDS-3UTR GCA 90 bp | TCGTCCGTCCGTCCTGGTGGTATAGGGAACCTGAGACTTCGGGAACTCTGTGGACCCGGTCCATGTCGCTaGTCGCATACTGGAAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSVRPGGIGNLRLRELCGPGPCR*SHTGRG Trigger: GCCTCTTCCAGTATGCGAGCAGCGACATGGACCGGG...TCCACAGAGTTCCCGAAGTCTCAGGTTCCCTATACCACCAGGACGGACGGACGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR GCA 90 bp | TTTATTGATGCAGCGGCCCCCAGGAAGGGACAGGGCCTTAGTGATGCACAGTGGCCCGGTCCATGTCGCTaGTCGCATACTGGAAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FIDAAAPRKGQGLSDAQWPGPCR*SHTGRG Trigger: GCCTCTTCCAGTATGCGAGCAGCGACATGGACCGGG...CCACTGTGCATCACTAAGGCCCTGTCCCTTCCTGGGGGCCGCTGCATCAATAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR CCA 90 bp | TATAGGGAACCTGAGACTTCGGGAACTCTGTGGAGGCTGGAGGAACCTCTTGGAGCCAGGATCACAGCCTaGAGTGGCTGGTGGGACCCG | + |
|
Preference number: 4 (lower is better) Translates to: YREPETSGTLWRLEEPLGARITA*SGWWDP Trigger: CGGGTCCCACCAGCCACTCCAGGCTGTGATCCTGGC...TCCAAGAGGTTCCTCCAGCCTCCACAGAGTTCCCGAAGTCTCAGGTTCCCTATA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR CCA 90 bp | GGGGAAGTCGCCAGAGGTCCCAGTGACTGGAGACAGTCGCTCAGACTTGATGCTGCTCGCAAGGTGGCTTaGAGAGAAGATCGGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GEVARGPSDWRQSLRLDAARKVA*REDRVS Trigger: GGACACCCGATCTTCTCTCCAAGCCACCTTGCGAGC...AGCATCAAGTCTGAGCGACTGTCTCCAGTCACTGGGACCTCTGGCGACTTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 |
||
| CDS-3UTR CCA 90 bp | TCCGTCCGTCCTGGTGGTATAGGGAACCTGAGACTTCGGGAACTCTGTGGAGGCGCTCGCAAGGTGGCTTaGAGAGAAGATCGGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SVRPGGIGNLRLRELCGGARKVA*REDRVS Trigger: GGACACCCGATCTTCTCTCCAAGCCACCTTGCGAGC...GCCTCCACAGAGTTCCCGAAGTCTCAGGTTCCCTATACCACCAGGACGGACGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR TCA 90 bp | TCCGTCCGTCCTGGTGGTATAGGGAACCTGAGACTTCGGGAACTCTGTGGAGGCCGAACTTGCGCTTGGTaGAAGTCACCTGCCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SVRPGGIGNLRLRELCGGRTCAW*KSPACS Trigger: GGAACAGGCAGGTGACTTTCACCAAGCGCAAGTTCG...GCCTCCACAGAGTTCCCGAAGTCTCAGGTTCCCTATACCACCAGGACGGACGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR TCA 90 bp | CCGTCCTGGTGGTATAGGGAACCTGAGACTTCGGGAACTCTGTGGAGGCTGGAGCGAACTTGCGCTTGGTaGAAGTCACCTGCCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PSWWYREPETSGTLWRLERTCAW*KSPACS Trigger: GGAACAGGCAGGTGACTTTCACCAAGCGCAAGTTCG...CTCCAGCCTCCACAGAGTTCCCGAAGTCTCAGGTTCCCTATACCACCAGGACGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR TCA 90 bp | GTGACTGGAGACAGTCGCTCAGACTTGATGCTGACCGGAGGTGTCGGAGGGGAGCTCCTCTTCAGTGTCTaGAGGATATCCGCGTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VTGDSRSDLMLTGGVGGELLFSV*RISALV Trigger: CACCAACGCGGATATCCTTCAGACACTGAAGAGGAG...CTCCCCTCCGACACCTCCGGTCAGCATCAAGTCTGAGCGACTGTCTCCAGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 |
||
| CDS-3UTR CCA 90 bp | TCCTTGGGCTTTATTGATGCAGCGGCCCCCAGGAAGGGACAGGGCCTTAGTGATCTCTCCAGGACCTTCTaGCCCCTCCTCCATATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLGFIDAAAPRKGQGLSDLSRTF*PLLHIQ Trigger: CTGGATATGGAGGAGGGGCCAGAAGGTCCTGGAGAG...ATCACTAAGGCCCTGTCCCTTCCTGGGGGCCGCTGCATCAATAAAGCCCAAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR GCA 90 bp | TATAGGGAACCTGAGACTTCGGGAACTCTGTGGAGGCTGGAGGAACCTCTTGGACCCGGTCCATGTCGCTaGTCGCATACTGGAAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: YREPETSGTLWRLEEPLGPGPCR*SHTGRG Trigger: GCCTCTTCCAGTATGCGAGCAGCGACATGGACCGGG...TCCAAGAGGTTCCTCCAGCCTCCACAGAGTTCCCGAAGTCTCAGGTTCCCTATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR CCA 90 bp | TGGAGACAGTCGCTCAGACTTGATGCTGACCGGAGGTGTCGGAGGGGAGGCCCCACCTGCCTGTTCCTTTaGTCTAGAATTCGTGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: WRQSLRLDADRRCRRGGPTCLFL*SRIREI Trigger: GATCTCACGAATTCTAGACCAAAGGAACAGGCAGGT...GGGGCCTCCCCTCCGACACCTCCGGTCAGCATCAAGTCTGAGCGACTGTCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 |
||
| CDS-3UTR CCA 90 bp | GGTATAGGGAACCTGAGACTTCGGGAACTCTGTGGAGGCTGGAGGAACCTCTTGCTCTCCAGGACCTTCTaGCCCCTCCTCCATATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GIGNLRLRELCGGWRNLLLSRTF*PLLHIQ Trigger: CTGGATATGGAGGAGGGGCCAGAAGGTCCTGGAGAG...CAAGAGGTTCCTCCAGCCTCCACAGAGTTCCCGAAGTCTCAGGTTCCCTATACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR TCA 90 bp | TCCTTGGGCTTTATTGATGCAGCGGCCCCCAGGAAGGGACAGGGCCTTAGTGATCTCCTCTTCAGTGTCTaGAGGATATCCGCGTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLGFIDAAAPRKGQGLSDLLFSV*RISALV Trigger: CACCAACGCGGATATCCTTCAGACACTGAAGAGGAG...ATCACTAAGGCCCTGTCCCTTCCTGGGGGCCGCTGCATCAATAAAGCCCAAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR GCA 90 bp | AAGGGACAGGGCCTTAGTGATGCACAGTGGGTGCCCTCGTCCGTCCGTCCTGGTTTGGTGAAAGTCACCTaGCTGTTCCTTTGGTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: KGQGLSDAQWVPSSVRPGLVKVT*LFLWSR Trigger: TCTAGACCAAAGGAACAGGCAGGTGACTTTCACCAA...ACCAGGACGGACGGACGAGGGCACCCACTGTGCATCACTAAGGCCCTGTCCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR GCA 90 bp | AGTCCTTGGGCTTTATTGATGCAGCGGCCCCCAGGAAGGGACAGGGCCTTAGTGTACTGGAAGAGGCGTTaGGCGCTGTTGAAGATGATC | + |
|
Preference number: 4 (lower is better) Translates to: SPWALLMQRPPGRDRALVYWKRR*ALLKMI Trigger: GATCATCTTCAACAGCGCGCAACGCCTCTTCCAGTA...CACTAAGGCCCTGTCCCTTCCTGGGGGCCGCTGCATCAATAAAGCCCAAGGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR CCA 90 bp | TTGGGCTTTATTGATGCAGCGGCCCCCAGGAAGGGACAGGGCCTTAGTGATGCAAGAGGTCCCAGTGACTaGAGACAGTCGCTCAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: LGFIDAAAPRKGQGLSDARGPSD*RQSLRL Trigger: AAGTCTGAGCGACTGTCTCCAGTCACTGGGACCTCT...TGCATCACTAAGGCCCTGTCCCTTCCTGGGGGCCGCTGCATCAATAAAGCCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR CCA 90 bp | TCGTCCGTCCGTCCTGGTGGTATAGGGAACCTGAGACTTCGGGAACTCTGTGGAAGAGGTCCCAGTGACTaGAGACAGTCGCTCAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: SSVRPGGIGNLRLRELCGRGPSD*RQSLRL Trigger: AAGTCTGAGCGACTGTCTCCAGTCACTGGGACCTCT...TCCACAGAGTTCCCGAAGTCTCAGGTTCCCTATACCACCAGGACGGACGGACGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR CCA 90 bp | TGCACAGTGGGTGCCCTCGTCCGTCCGTCCTGGTGGTATAGGGAACCTGAGACTACCTGCCTGTTCCTTTaGTCTAGAATTCGTGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: CTVGALVRPSWWYREPETTCLFL*SRIREI Trigger: GATCTCACGAATTCTAGACCAAAGGAACAGGCAGGT...AGTCTCAGGTTCCCTATACCACCAGGACGGACGGACGAGGGCACCCACTGTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR CCA 90 bp | ATTGATGCAGCGGCCCCCAGGAAGGGACAGGGCCTTAGTGATGCACAGTGGGTGACCTGCCTGTTCCTTTaGTCTAGAATTCGTGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: IDAAAPRKGQGLSDAQWVTCLFL*SRIREI Trigger: GATCTCACGAATTCTAGACCAAAGGAACAGGCAGGT...CACCCACTGTGCATCACTAAGGCCCTGTCCCTTCCTGGGGGCCGCTGCATCAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR GCA 90 bp | TCCGTCCGTCCTGGTGGTATAGGGAACCTGAGACTTCGGGAACTCTGTGGAGGCTTGGTGAAAGTCACCTaGCTGTTCCTTTGGTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SVRPGGIGNLRLRELCGGLVKVT*LFLWSR Trigger: TCTAGACCAAAGGAACAGGCAGGTGACTTTCACCAA...GCCTCCACAGAGTTCCCGAAGTCTCAGGTTCCCTATACCACCAGGACGGACGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR CCA 90 bp | CGTCCTGGTGGTATAGGGAACCTGAGACTTCGGGAACTCTGTGGAGGCTGGAGGACCTGCCTGTTCCTTTaGTCTAGAATTCGTGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: RPGGIGNLRLRELCGGWRTCLFL*SRIREI Trigger: GATCTCACGAATTCTAGACCAAAGGAACAGGCAGGT...CCTCCAGCCTCCACAGAGTTCCCGAAGTCTCAGGTTCCCTATACCACCAGGACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR CCA 90 bp | AGTCCTTGGGCTTTATTGATGCAGCGGCCCCCAGGAAGGGACAGGGCCTTAGTGACCTGCCTGTTCCTTTaGTCTAGAATTCGTGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: SPWALLMQRPPGRDRALVTCLFL*SRIREI Trigger: GATCTCACGAATTCTAGACCAAAGGAACAGGCAGGT...CACTAAGGCCCTGTCCCTTCCTGGGGGCCGCTGCATCAATAAAGCCCAAGGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS GCA 90 bp | CTGGCCTCCGCCCATCAGTCGCCAGGTACAGAGGCGGGGGCGTCTTaGTCGCAAGGTGGCTTGGAGAGAAGATCGGGTGTCCCAGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: LASAHQSPGTEAGAS*SQGGLERRSGVPGP Trigger: CGGGCCTGGGACACCCGATCTTCTCTCCAAGCCACCTTGCGAGCAAGACGCCCCCGCCTCTGTACCTGGCGACTGATGGGCGGAGGCCAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS CCA 90 bp | GGACAGACGGGGCCTCCCCCAGCCCGCCAGGATCACAGCCTGGAGTaGCTGGTGGGACCCGGTAGGACAGCTCTGAAACCGACATTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GQTGPPPARQDHSLE*LVGPGRTALKPTLR Trigger: CCGCAATGTCGGTTTCAGAGCTGTCCTACCGGGTCCCACCAGCCACTCCAGGCTGTGATCCTGGCGGGCTGGGGGAGGCCCCGTCTGTCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR CAA 90 bp | CAGCGGCCCCCAGGAAGGGACAGGGCCTTAGTGATGCACAGTGGGTGCCCTCGTTCTCCCGGGCTGCAATaGAGGTGCCCAATCCCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QRPPGRDRALVMHSGCPRSPGLQ*RCPIPL Trigger: GAGGGGGATTGGGCACCTCAATTGCAGCCCGGGAGA...ACGAGGGCACCCACTGTGCATCACTAAGGCCCTGTCCCTTCCTGGGGGCCGCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000110141.9 |
||
| CDS-3UTR CAA 90 bp | CAGGGAGGCCGAGGGCCGCAGTGGCTCTGCAAGGGGCCTGGCAAGGAGCAGCGGATACTGGAAGAGGCGTaGCGCGCTGTTGAAGATGAT | + |
|
Preference number: 5 (lower is better) Translates to: QGGRGPQWLCKGPGKEQRILEEA*RAVEDD Trigger: ATCATCTTCAACAGCGCGCAACGCCTCTTCCAGTAT...CCGCTGCTCCTTGCCAGGCCCCTTGCAGAGCCACTGCGGCCCTCGGCCTCCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 |
||
| CDS-3UTR CAA 90 bp | TGGAGACAGTCGCTCAGACTTGATGCTGACCGGAGGTGTCGGAGGGGAGGCCCCCTACAGCGTCCCTCGTaGGTGGCCAGGGTGAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: WRQSLRLDADRRCRRGGPLQRPS*VARVRV Trigger: AACCCTCACCCTGGCCACCAACGAGGGACGCTGTAG...GGGGCCTCCCCTCCGACACCTCCGGTCAGCATCAAGTCTGAGCGACTGTCTCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 |
||
| CDS-3UTR CAA 90 bp | CCTCCCGAGTCCTTGGGCTTTATTGATGCAGCGGCCCCCAGGAAGGGACAGGGCCTACAGCGTCCCTCGTaGGTGGCCAGGGTGAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PPESLGFIDAAAPRKGQGLQRPS*VARVRV Trigger: AACCCTCACCCTGGCCACCAACGAGGGACGCTGTAG...GCCCTGTCCCTTCCTGGGGGCCGCTGCATCAATAAAGCCCAAGGACTCGGGAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR CAA 90 bp | GCGGCCCCCAGGAAGGGACAGGGCCTTAGTGATGCACAGTGGGTGCCCTCGTCCAGTCCGAACTTGCGCTaGGTGAAAGTCACCTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: AAPRKGQGLSDAQWVPSSSPNLR*VKVTCL Trigger: CAGGCAGGTGACTTTCACCAAGCGCAAGTTCGGACT...GGACGAGGGCACCCACTGTGCATCACTAAGGCCCTGTCCCTTCCTGGGGGCCGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR CAA 90 bp | CTGCCCAGTGCCCTCCCGAGTCCTTGGGCTTTATTGATGCAGCGGCCCCCAGGACGCTGTACAGGCTTCTaGAGGTGCCCAATCCCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LPSALPSPWALLMQRPPGRCTGF*RCPIPL Trigger: GAGGGGGATTGGGCACCTCAAGAAGCCTGTACAGCG...TCCTGGGGGCCGCTGCATCAATAAAGCCCAAGGACTCGGGAGGGCACTGGGCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR CAA 90 bp | CCCCCAGGAAGGGACAGGGCCTTAGTGATGCACAGTGGGTGCCCTCGTCCGTCCAGTCCGAACTTGCGCTaGGTGAAAGTCACCTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PPGRDRALVMHSGCPRPSSPNLR*VKVTCL Trigger: CAGGCAGGTGACTTTCACCAAGCGCAAGTTCGGACT...GGACGGACGAGGGCACCCACTGTGCATCACTAAGGCCCTGTCCCTTCCTGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR CAA 90 bp | CAGCGGCCCCCAGGAAGGGACAGGGCCTTAGTGATGCACAGTGGGTGCCCTCGTAGGCGTTGCGCGCTGTaGAAGATGATCAGGGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: QRPPGRDRALVMHSGCPRRRCAL*KMIRAM Trigger: CATTGCCCTGATCATCTTCAACAGCGCGCAACGCCT...ACGAGGGCACCCACTGTGCATCACTAAGGCCCTGTCCCTTCCTGGGGGCCGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR CAA 90 bp | TGCACAGTGGGTGCCCTCGTCCGTCCGTCCTGGTGGTATAGGGAACCTGAGACTCTACAGCGTCCCTCGTaGGTGGCCAGGGTGAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: CTVGALVRPSWWYREPETLQRPS*VARVRV Trigger: AACCCTCACCCTGGCCACCAACGAGGGACGCTGTAG...AGTCTCAGGTTCCCTATACCACCAGGACGGACGGACGAGGGCACCCACTGTGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR CAA 90 bp | CAGTGCCCTCCCGAGTCCTTGGGCTTTATTGATGCAGCGGCCCCCAGGAAGGGACGCTGTACAGGCTTCTaGAGGTGCCCAATCCCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QCPPESLGFIDAAAPRKGRCTGF*RCPIPL Trigger: GAGGGGGATTGGGCACCTCAAGAAGCCTGTACAGCG...TCCCTTCCTGGGGGCCGCTGCATCAATAAAGCCCAAGGACTCGGGAGGGCACTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR CAA 90 bp | CGTCCTGGTGGTATAGGGAACCTGAGACTTCGGGAACTCTGTGGAGGCTGGAGGCTACAGCGTCCCTCGTaGGTGGCCAGGGTGAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: RPGGIGNLRLRELCGGWRLQRPS*VARVRV Trigger: AACCCTCACCCTGGCCACCAACGAGGGACGCTGTAG...CCTCCAGCCTCCACAGAGTTCCCGAAGTCTCAGGTTCCCTATACCACCAGGACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR CAA 90 bp | GCCCAGTGCCCTCCCGAGTCCTTGGGCTTTATTGATGCAGCGGCCCCCAGGAAGATACTGGAAGAGGCGTaGCGCGCTGTTGAAGATGAT | + |
|
Preference number: 5 (lower is better) Translates to: AQCPPESLGFIDAAAPRKILEEA*RAVEDD Trigger: ATCATCTTCAACAGCGCGCAACGCCTCTTCCAGTAT...CTTCCTGGGGGCCGCTGCATCAATAAAGCCCAAGGACTCGGGAGGGCACTGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR CAA 90 bp | CGTCCTGGTGGTATAGGGAACCTGAGACTTCGGGAACTCTGTGGAGGCTGGAGGAGTCCGAACTTGCGCTaGGTGAAAGTCACCTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RPGGIGNLRLRELCGGWRSPNLR*VKVTCL Trigger: CAGGCAGGTGACTTTCACCAAGCGCAAGTTCGGACT...CCTCCAGCCTCCACAGAGTTCCCGAAGTCTCAGGTTCCCTATACCACCAGGACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR CAA 90 bp | CCGTCCTGGTGGTATAGGGAACCTGAGACTTCGGGAACTCTGTGGAGGCTGGAGAGTCCGAACTTGCGCTaGGTGAAAGTCACCTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PSWWYREPETSGTLWRLESPNLR*VKVTCL Trigger: CAGGCAGGTGACTTTCACCAAGCGCAAGTTCGGACT...CTCCAGCCTCCACAGAGTTCCCGAAGTCTCAGGTTCCCTATACCACCAGGACGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
||
| CDS-3UTR CAA 90 bp | AGGGAACCTGAGACTTCGGGAACTCTGTGGAGGCTGGAGGAACCTCTTGGAGCGAGGCGTTGCGCGCTGTaGAAGATGATCAGGGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: REPETSGTLWRLEEPLGARRCAL*KMIRAM Trigger: CATTGCCCTGATCATCTTCAACAGCGCGCAACGCCT...CGCTCCAAGAGGTTCCTCCAGCCTCCACAGAGTTCCCGAAGTCTCAGGTTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| CDS-3UTR CAA 90 bp | CCGTCCTGGTGGTATAGGGAACCTGAGACTTCGGGAACTCTGTGGAGGCTGGAGAGGCGTTGCGCGCTGTaGAAGATGATCAGGGCAATG | + |
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Preference number: 5 (lower is better) Translates to: PSWWYREPETSGTLWRLERRCAL*KMIRAM Trigger: CATTGCCCTGATCATCTTCAACAGCGCGCAACGCCT...CTCCAGCCTCCACAGAGTTCCCGAAGTCTCAGGTTCCCTATACCACCAGGACGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| CDS-3UTR CAA 90 bp | GGTGGTATAGGGAACCTGAGACTTCGGGAACTCTGTGGAGGCTGGAGGAACCTCAGTCCGAACTTGCGCTaGGTGAAAGTCACCTGCCTG | + |
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Preference number: 5 (lower is better) Translates to: GGIGNLRLRELCGGWRNLSPNLR*VKVTCL Trigger: CAGGCAGGTGACTTTCACCAAGCGCAAGTTCGGACT...GAGGTTCCTCCAGCCTCCACAGAGTTCCCGAAGTCTCAGGTTCCCTATACCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| CDS-3UTR CAA 90 bp | TCCTTGGGCTTTATTGATGCAGCGGCCCCCAGGAAGGGACAGGGCCTTAGTGATAGGCGTTGCGCGCTGTaGAAGATGATCAGGGCAATG | + |
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Preference number: 5 (lower is better) Translates to: SLGFIDAAAPRKGQGLSDRRCAL*KMIRAM Trigger: CATTGCCCTGATCATCTTCAACAGCGCGCAACGCCT...ATCACTAAGGCCCTGTCCCTTCCTGGGGGCCGCTGCATCAATAAAGCCCAAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| CDS-3UTR CAA 90 bp | TTTATTGATGCAGCGGCCCCCAGGAAGGGACAGGGCCTTAGTGATGCACAGTGGAGGCGTTGCGCGCTGTaGAAGATGATCAGGGCAATG | + |
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Preference number: 5 (lower is better) Translates to: FIDAAAPRKGQGLSDAQWRRCAL*KMIRAM Trigger: CATTGCCCTGATCATCTTCAACAGCGCGCAACGCCT...CCACTGTGCATCACTAAGGCCCTGTCCCTTCCTGGGGGCCGCTGCATCAATAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| CDS-3UTR CAA 90 bp | ATTGATGCAGCGGCCCCCAGGAAGGGACAGGGCCTTAGTGATGCACAGTGGGTGATACTGGAAGAGGCGTaGCGCGCTGTTGAAGATGAT | + |
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Preference number: 5 (lower is better) Translates to: IDAAAPRKGQGLSDAQWVILEEA*RAVEDD Trigger: ATCATCTTCAACAGCGCGCAACGCCTCTTCCAGTAT...CACCCACTGTGCATCACTAAGGCCCTGTCCCTTCCTGGGGGCCGCTGCATCAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| CDS-3UTR CAA 90 bp | AGGGAACCTGAGACTTCGGGAACTCTGTGGAGGCTGGAGGAACCTCTTGGAGCGATACTGGAAGAGGCGTaGCGCGCTGTTGAAGATGAT | + |
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Preference number: 5 (lower is better) Translates to: REPETSGTLWRLEEPLGAILEEA*RAVEDD Trigger: ATCATCTTCAACAGCGCGCAACGCCTCTTCCAGTAT...CGCTCCAAGAGGTTCCTCCAGCCTCCACAGAGTTCCCGAAGTCTCAGGTTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| CDS-3UTR CAA 90 bp | TTGGGCTTTATTGATGCAGCGGCCCCCAGGAAGGGACAGGGCCTTAGTGATGCAATACTGGAAGAGGCGTaGCGCGCTGTTGAAGATGAT | + |
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Preference number: 5 (lower is better) Translates to: LGFIDAAAPRKGQGLSDAILEEA*RAVEDD Trigger: ATCATCTTCAACAGCGCGCAACGCCTCTTCCAGTAT...TGCATCACTAAGGCCCTGTCCCTTCCTGGGGGCCGCTGCATCAATAAAGCCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| CDS TCA 72 bp | GAGAAGATCGGGTGTCCCAGGCCCGGGGGTCGAAAGTaGGGCGGGCGGCTGTGGACAGACGGGGCCTCCCCC | + |
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Preference number: 6 (lower is better) Translates to: EKIGCPRPGGRK*GGRLWTDGASP Trigger: GGGGGAGGCCCCGTCTGTCCACAGCCGCCCGCCTCACTTTCGACCCCCGGGCCTGGGACACCCGATCTTCTC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| CDS GCA 72 bp | AGGGTTGCAGGGGTCCCTGAGCTGCGTCTCCCGGGCTaGAATCAGGCCAGGGGGCAGGTCTGGCCTCCGCCC | + |
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Preference number: 6 (lower is better) Translates to: RVAGVPELRLPG*NQARGQVWPPP Trigger: GGGCGGAGGCCAGACCTGCCCCCTGGCCTGATTGCAGCCCGGGAGACGCAGCTCAGGGACCCCTGCAACCCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110140.2 |
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| CDS TCA 72 bp | CTCGTTGGTGGCCAGGGTGAGGGTTGCAGGGGTCCCTaGGCTGCGTCTCCCGGGCTGCAATCAGGCCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: LVGGQGEGCRGP*AASPGLQSGQG Trigger: CCCCTGGCCTGATTGCAGCCCGGGAGACGCAGCTCAGGGACCCCTGCAACCCTCACCCTGGCCACCAACGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110140.2 |
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| CDS CCA 72 bp | GCCGCTGTACAGGCTTCTCAGGCCAGGGGGCAGGTCTaGCCTCCGCCCATCAGTCGCCAGGTACAGAGGCGG | + |
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Preference number: 6 (lower is better) Translates to: AAVQASQARGQV*PPPISRQVQRR Trigger: CCGCCTCTGTACCTGGCGACTGATGGGCGGAGGCCAGACCTGCCCCCTGGCCTGAGAAGCCTGTACAGCGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110143.8 |
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| CDS CAA 90 bp | TCTGGCCTCCGCCCATCAGTCGCCAGGTACAGAGGCGGGGGCGTCTaGCTCGCAAGGTGGCTTGGAGAGAAGATCGGGTGTCCCAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: SGLRPSVARYRGGGV*LARWLGEKIGCPRP Trigger: GGGCCTGGGACACCCGATCTTCTCTCCAAGCCACCTTGCGAGCAAGACGCCCCCGCCTCTGTACCTGGCGACTGATGGGCGGAGGCCAGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| CDS TCA 72 bp | CTCGTTGGTGGCCAGGGTGAGGGTTGCAGGGGTCCCTaGGCTGCGTCTCCCGGGCTGCAATCTGTGGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: LVGGQGEGCRGP*AASPGLQSVEP Trigger: AGGCTCCACAGATTGCAGCCCGGGAGACGCAGCTCAGGGACCCCTGCAACCCTCACCCTGGCCACCAACGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| CDS TCA 72 bp | CTCGTTGGTGGCCAGGGTGAGGGTTGCAGGGGTCCCTaGGCTGCGTCTCCCGGGCTGCAATTGAGGTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: LVGGQGEGCRGP*AASPGLQLRCP Trigger: TGGGCACCTCAATTGCAGCCCGGGAGACGCAGCTCAGGGACCCCTGCAACCCTCACCCTGGCCACCAACGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110141.9 |
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| CDS GCA 72 bp | AAGCTACCCAGAGCGGGGCCTGGGGCACCGGGACTCTaGAGGCCGCTGTACAGGCTTCTTGAGGTGCCCAAT | + |
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Preference number: 6 (lower is better) Translates to: KLPRAGPGAPGL*RPLYRLLEVPN Trigger: ATTGGGCACCTCAAGAAGCCTGTACAGCGGCCTGCAGAGTCCCGGTGCCCCAGGCCCCGCTCTGGGTAGCTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| CDS GCA 72 bp | GCCCATCAGTCGCCAGGTACAGAGGCGGGGGCGTCTTaGTCGCAAGGTGGCTTGGAGAGAAGATCGGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: AHQSPGTEAGAS*SQGGLERRSGV Trigger: GACACCCGATCTTCTCTCCAAGCCACCTTGCGAGCAAGACGCCCCCGCCTCTGTACCTGGCGACTGATGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| CDS CAA 72 bp | CGCCCATCAGTCGCCAGGTACAGAGGCGGGGGCGTCTaGCTCGCAAGGTGGCTTGGAGAGAAGATCGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: RPSVARYRGGGV*LARWLGEKIGC Trigger: ACACCCGATCTTCTCTCCAAGCCACCTTGCGAGCAAGACGCCCCCGCCTCTGTACCTGGCGACTGATGGGCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| CDS CCA 72 bp | CCCCAGTGTCCTCAGCAGCTTCTCTCCAGGACCTTCTaGCCCCTCCTCCATATCCAGCTCGGGCCCATCAAG | + |
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Preference number: 6 (lower is better) Translates to: PQCPQQLLSRTF*PLLHIQLGPIK Trigger: CTTGATGGGCCCGAGCTGGATATGGAGGAGGGGCCAGAAGGTCCTGGAGAGAAGCTGCTGAGGACACTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000110140.2 ENSMUST00000110141.9 ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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| CDS GCA 72 bp | AGGGTTGCAGGGGTCCCTGAGCTGCGTCTCCCGGGCTaGAATCTGTGGAGCCTGATGGTAAGAAGGCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: RVAGVPELRLPG*NLWSLMVRRQS Trigger: GCTTTGCCTTCTTACCATCAGGCTCCACAGATTGCAGCCCGGGAGACGCAGCTCAGGGACCCCTGCAACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110143.8 ENSMUST00000110146.9 ENSMUST00000163756.2 |
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