Pregenerated sensors for MED9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061650Ensembl transcript IDs: ENSMUST00000081980.7
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGAAGCCTCCGAGGACGCCTTCTTTCTTCCCTGTCAGGAAGAGCTaGAGCCCTTGCATTTCATGTGCTCTGCGCTTACAGGAACCAGTC | + |
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Preference number: 1 (lower is better) Translates to: QKPPRTPSFFPVRKS*SPCISCALRLQEPV Trigger: GACTGGTTCCTGTAAGCGCAGAGCACATGAAATGCAAGGGCTTCAGCTCTTCCTGACAGGGAAGAAAGAAGGCGTCCTCGGAGGCTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR GCA 90 bp | CCTGCCAGCTACTTTGCTCCAAACCAGAAGTGTGCAGGGACCATGTaGAGAGTAGCAAATGTGACTTCTTGGCTAAAGGGGAGACAGAGG | + |
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Preference number: 1 (lower is better) Translates to: PASYFAPNQKCAGTM*RVANVTSWLKGRQR Trigger: CCTCTGTCTCCCCTTTAGCCAAGAAGTCACATTTGCTACTCTGCACATGGTCCCTGCACACTTCTGGTTTGGAGCAAAGTAGCTGGCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR GCA 90 bp | AGTTGGCAGGCACCTGCTAAGTCCTCAGCTGGTCAGCCCAGGCTGTaGCCATTTCAAGATCCAAACAATAACTGGGTTCTTCTCACCTTC | + |
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Preference number: 1 (lower is better) Translates to: SWQAPAKSSAGQPRL*PFQDPNNNWVLLTF Trigger: GAAGGTGAGAAGAACCCAGTTATTGTTTGGATCTTGAAATGGGCACAGCCTGGGCTGACCAGCTGAGGACTTAGCAGGTGCCTGCCAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR GCA 90 bp | TTCTTTCTTCCCTGTCAGGAAGAGCTGAAGCCCTTGCATTTCATGTaGTCTGCGCTTACAGGAACCAGTCAGAGCCTTAAAACTGGCCCA | + |
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Preference number: 1 (lower is better) Translates to: FFLPCQEELKPLHFM*SALTGTSQSLKTGP Trigger: TGGGCCAGTTTTAAGGCTCTGACTGGTTCCTGTAAGCGCAGAGCACATGAAATGCAAGGGCTTCAGCTCTTCCTGACAGGGAAGAAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR GCA 90 bp | AGGCAGAGGTGCTTAACTGGCATCCTCTACTCAAACTCACTTTTCTaGCCAAATACCTGGAAGTCAGAACCCTCTTTCACACATTCCGGG | + |
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Preference number: 1 (lower is better) Translates to: RQRCLTGILYSNSLF*PNTWKSEPSFTHSG Trigger: CCCGGAATGTGTGAAAGAGGGTTCTGACTTCCAGGTATTTGGGCAGAAAAGTGAGTTTGAGTAGAGGATGCCAGTTAAGCACCTCTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR CCA 90 bp | TTAACTGGCATCCTCTACTCAAACTCACTTTTCTGCCCAAATACCTaGAAGTCAGAACCCTCTTTCACACATTCCGGGTCCCAGTGTGAG | + |
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Preference number: 1 (lower is better) Translates to: LTGILYSNSLFCPNT*KSEPSFTHSGSQCE Trigger: CTCACACTGGGACCCGGAATGTGTGAAAGAGGGTTCTGACTTCCAGGTATTTGGGCAGAAAAGTGAGTTTGAGTAGAGGATGCCAGTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR GCA 90 bp | ACCCACCCTCTGGCCTTTCAAAACAATGTTCATACTCTCACAGCTTaGTTTAATTATAATAAATCCATGCCATCTGAGTACAGGCCTAAT | + |
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Preference number: 1 (lower is better) Translates to: THPLAFQNNVHTLTA*FNYNKSMPSEYRPN Trigger: ATTAGGCCTGTACTCAGATGGCATGGATTTATTATAATTAAAGCAAGCTGTGAGAGTATGAACATTGTTTTGAAAGGCCAGAGGGTGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR CAA 90 bp | CCAGGGCATACGAATCAGGGCAGAGCCGCTTCCTTAACAGCCTCTTaGAGCCAGTGTGGGAAGGACAAAGGGCCCCAGGCAAGCAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: PGHTNQGRAASLTAS*SQCGKDKGPQASSA Trigger: AGCACTGCTTGCCTGGGGCCCTTTGTCCTTCCCACACTGGCTCAAAGAGGCTGTTAAGGAAGCGGCTCTGCCCTGATTCGTATGCCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR-3UTR TCA 90 bp | GCGCTCCTGCCAAGAAGGCCAGTTGGCAGGCACCTGCTAAGTCCTCAGCTGGTCCTACCTGCGAGTCGCTaGGTACACTCTACAAGTAGA | + |
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Preference number: 2 (lower is better) Translates to: ALLPRRPVGRHLLSPQLVLPASR*VHSTSR Trigger: TCTACTTGTAGAGTGTACTCAGCGACTCGCAGGTAG...GACCAGCTGAGGACTTAGCAGGTGCCTGCCAACTGGCCTTCTTGGCAGGAGCGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR-3UTR TCA 90 bp | AGCCACCCACCCTCTGGCCTTTCAAAACAATGTTCATACTCTCACAGCTTGCTTGTGGCCTCCCAGTTTTaGGCGGGGCTCCCAAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: SHPPSGLSKQCSYSHSLLVASQF*AGLPRS Trigger: GCTCCTTGGGAGCCCCGCTCAAAACTGGGAGGCCAC...AAGCAAGCTGTGAGAGTATGAACATTGTTTTGAAAGGCCAGAGGGTGGGTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR-3UTR GCA 90 bp | TGCTTGCTAACAAACATCCCCAGCCAGCGCTCCTGCCAAGAAGGCCAGTTGGCATTTCCTCTCCCTCTGTaGCCTGTAGATCTGCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: CLLTNIPSQRSCQEGQLAFPLPL*PVDLLG Trigger: TCCCAGCAGATCTACAGGGCACAGAGGGAGAGGAAA...TGCCAACTGGCCTTCTTGGCAGGAGCGCTGGCTGGGGATGTTTGTTAGCAAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR CAA 90 bp | ACGCCCTTCAAACCACACATAACCCTGGCTGAGAAACTGCCCCGATaGCTCCTGCCAGCTACTTTGCTCCAAACCAGAAGTGTGCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: TPFKPHITLAEKLPR*LLPATLLQTRSVQG Trigger: TCCCTGCACACTTCTGGTTTGGAGCAAAGTAGCTGGCAGGAGCAATCGGGGCAGTTTCTCAGCCAGGGTTATGTGTGGTTTGAAGGGCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR-3UTR TCA 90 bp | TTCTTTCTTCCCTGTCAGGAAGAGCTGAAGCCCTTGCATTTCATGTGCTCTGCGGGACATGGTCAGGGCTaGGATAGCACTGAGGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: FFLPCQEELKPLHFMCSAGHGQG*DSTEAP Trigger: TGGGGCCTCAGTGCTATCTCAGCCCTGACCATGTCC...CGCAGAGCACATGAAATGCAAGGGCTTCAGCTCTTCCTGACAGGGAAGAAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR-3UTR CCA 90 bp | AGAATGCTTGCTAACAAACATCCCCAGCCAGCGCTCCTGCCAAGAAGGCCAGTTCTCTTTGAGCCAGTGTaGGAAGGACAAAGGGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: RMLANKHPQPALLPRRPVLFEPV*EGQRAP Trigger: TGGGGCCCTTTGTCCTTCCCACACTGGCTCAAAGAG...AACTGGCCTTCTTGGCAGGAGCGCTGGCTGGGGATGTTTGTTAGCAAGCATTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR CAA 90 bp | TCCGAGGACGCCTTCTTTCTTCCCTGTCAGGAAGAGCTGAAGCCCTaGCATTTCATGTGCTCTGCGCTTACAGGAACCAGTCAGAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: SEDAFFLPCQEELKP*HFMCSALTGTSQSL Trigger: AAGGCTCTGACTGGTTCCTGTAAGCGCAGAGCACATGAAATGCAAGGGCTTCAGCTCTTCCTGACAGGGAAGAAAGAAGGCGTCCTCGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR-3UTR CCA 90 bp | ACAGGTCACCACACGGAACAGAAGCCTCCGAGGACGCCTTCTTTCTTCCCTGTCAAGCCACCCACCCTCTaGCCTTTCAAAACAATGTTC | + |
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Preference number: 2 (lower is better) Translates to: TGHHTEQKPPRTPSFFPVKPPTL*PFKTMF Trigger: GAACATTGTTTTGAAAGGCCAGAGGGTGGGTGGCTT...GACAGGGAAGAAAGAAGGCGTCCTCGGAGGCTTCTGTTCCGTGTGGTGACCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR-3UTR TCA 90 bp | TTCTTTCTTCCCTGTCAGGAAGAGCTGAAGCCCTTGCATTTCATGTGCTCTGCGCTTCTCACCTTCCCCTaGGAAGGAAAGGGCCATGGT | + |
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Preference number: 2 (lower is better) Translates to: FFLPCQEELKPLHFMCSALLTFP*EGKGHG Trigger: ACCATGGCCCTTTCCTTCTCAGGGGAAGGTGAGAAG...CGCAGAGCACATGAAATGCAAGGGCTTCAGCTCTTCCTGACAGGGAAGAAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR-3UTR GCA 90 bp | GCGCTCCTGCCAAGAAGGCCAGTTGGCAGGCACCTGCTAAGTCCTCAGCTGGTCATTATAATAAATCCATaGCATCTGAGTACAGGCCTA | + |
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Preference number: 2 (lower is better) Translates to: ALLPRRPVGRHLLSPQLVIIINP*HLSTGL Trigger: TAGGCCTGTACTCAGATGGCATGGATTTATTATAAT...GACCAGCTGAGGACTTAGCAGGTGCCTGCCAACTGGCCTTCTTGGCAGGAGCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR-3UTR CCA 90 bp | GAGAAACTGCCCCGATTGCTCCTGCCAGCTACTTTGCTCCAAACCAGAAGTGTGGCAAATGTGACTTCTTaGCTAAAGGGGAGACAGAGG | + |
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Preference number: 2 (lower is better) Translates to: EKLPRLLLPATLLQTRSVANVTS*LKGRQR Trigger: CCTCTGTCTCCCCTTTAGCCAAGAAGTCACATTTGC...CACACTTCTGGTTTGGAGCAAAGTAGCTGGCAGGAGCAATCGGGGCAGTTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR-3UTR GCA 90 bp | AAGCCCTTGCATTTCATGTGCTCTGCGCTTACAGGAACCAGTCAGAGCCTTAAAGTCCCAAGGCAGAGGTaGTTAACTGGCATCCTCTAC | + |
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Preference number: 2 (lower is better) Translates to: KPLHFMCSALTGTSQSLKVPRQR*LTGILY Trigger: GTAGAGGATGCCAGTTAAGCACCTCTGCCTTGGGAC...TTTAAGGCTCTGACTGGTTCCTGTAAGCGCAGAGCACATGAAATGCAAGGGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR-3UTR CCA 90 bp | AAGTCCTCAGCTGGTCAGCCCAGGCTGTGCCCATTTCAAGATCCAAACAATAACAGAAGGAAAGGGCCATaGTGCCCTCAGTGTAACAGT | + |
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Preference number: 2 (lower is better) Translates to: KSSAGQPRLCPFQDPNNNRRKGP*CPQCNS Trigger: ACTGTTACACTGAGGGCACCATGGCCCTTTCCTTCT...GTTATTGTTTGGATCTTGAAATGGGCACAGCCTGGGCTGACCAGCTGAGGACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR-3UTR CCA 90 bp | AAGCCCTTGCATTTCATGTGCTCTGCGCTTACAGGAACCAGTCAGAGCCTTAAACAGTGTGAGGCAGCTTaGATAGGCAATGCCACCAGA | + |
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Preference number: 2 (lower is better) Translates to: KPLHFMCSALTGTSQSLKQCEAA*IGNATR Trigger: TCTGGTGGCATTGCCTATCCAAGCTGCCTCACACTG...TTTAAGGCTCTGACTGGTTCCTGTAAGCGCAGAGCACATGAAATGCAAGGGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR-3UTR TCA 90 bp | TCCTCTACTCAAACTCACTTTTCTGCCCAAATACCTGGAAGTCAGAACCCTCTTCAGTGTAACAGTCCCTaGGAGACAGAGAACACGGTG | + |
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Preference number: 2 (lower is better) Translates to: SSTQTHFSAQIPGSQNPLQCNSP*ETENTV Trigger: CACCGTGTTCTCTGTCTCTCAGGGACTGTTACACTG...AAGAGGGTTCTGACTTCCAGGTATTTGGGCAGAAAAGTGAGTTTGAGTAGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR-3UTR TCA 90 bp | AAGCCCTTGCATTTCATGTGCTCTGCGCTTACAGGAACCAGTCAGAGCCTTAAAGGAACAGTATGTACCTaGTACCATGCTGATGCTATC | + |
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Preference number: 2 (lower is better) Translates to: KPLHFMCSALTGTSQSLKGTVCT*YHADAI Trigger: GATAGCATCAGCATGGTATCAGGTACATACTGTTCC...TTTAAGGCTCTGACTGGTTCCTGTAAGCGCAGAGCACATGAAATGCAAGGGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR-3UTR GCA 90 bp | TCCTCTACTCAAACTCACTTTTCTGCCCAAATACCTGGAAGTCAGAACCCTCTTGCAATGCCACCAGAATaGTTGCTAACAAACATCCCC | + |
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Preference number: 2 (lower is better) Translates to: SSTQTHFSAQIPGSQNPLAMPPE*LLTNIP Trigger: GGGGATGTTTGTTAGCAAGCATTCTGGTGGCATTGC...AAGAGGGTTCTGACTTCCAGGTATTTGGGCAGAAAAGTGAGTTTGAGTAGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR-3UTR CAA 90 bp | GCGCTCCTGCCAAGAAGGCCAGTTGGCAGGCACCTGCTAAGTCCTCAGCTGGTCTCCTTAACAGCCTCTTaGAGCCAGTGTGGGAAGGAC | + |
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Preference number: 3 (lower is better) Translates to: ALLPRRPVGRHLLSPQLVSLTAS*SQCGKD Trigger: GTCCTTCCCACACTGGCTCAAAGAGGCTGTTAAGGA...GACCAGCTGAGGACTTAGCAGGTGCCTGCCAACTGGCCTTCTTGGCAGGAGCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR CCA 72 bp | CAGAGCCGCTTCCTTAACAGCCTCTTTGAGCCAGTGTaGGAAGGACAAAGGGCCCCAGGCAAGCAGTGCTTC | + |
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Preference number: 3 (lower is better) Translates to: QSRFLNSLFEPV*EGQRAPGKQCF Trigger: GAAGCACTGCTTGCCTGGGGCCCTTTGTCCTTCCCACACTGGCTCAAAGAGGCTGTTAAGGAAGCGGCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR TCA 72 bp | GCTCCCCACGCCCTTCAAACCACACATAACCCTGGCTaGGAAACTGCCCCGATTGCTCCTGCCAGCTACTTT | + |
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Preference number: 3 (lower is better) Translates to: APHALQTTHNPG*ETAPIAPASYF Trigger: AAAGTAGCTGGCAGGAGCAATCGGGGCAGTTTCTCAGCCAGGGTTATGTGTGGTTTGAAGGGCGTGGGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR GCA 72 bp | CTGAGAAACTGCCCCGATTGCTCCTGCCAGCTACTTTaGTCCAAACCAGAAGTGTGCAGGGACCATGTGCAG | + |
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Preference number: 3 (lower is better) Translates to: LRNCPDCSCQLL*SKPEVCRDHVQ Trigger: CTGCACATGGTCCCTGCACACTTCTGGTTTGGAGCAAAGTAGCTGGCAGGAGCAATCGGGGCAGTTTCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR TCA 72 bp | CCGAGGACGCCTTCTTTCTTCCCTGTCAGGAAGAGCTaGAGCCCTTGCATTTCATGTGCTCTGCGCTTACAG | + |
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Preference number: 3 (lower is better) Translates to: PRTPSFFPVRKS*SPCISCALRLQ Trigger: CTGTAAGCGCAGAGCACATGAAATGCAAGGGCTTCAGCTCTTCCTGACAGGGAAGAAAGAAGGCGTCCTCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR-3UTR CAA 90 bp | GCCTTCTTTCTTCCCTGTCAGGAAGAGCTGAAGCCCTTGCATTTCATGTGCTCTGGCTGGAAACTGGAGTaGGTGGCTAGATCGTGGAGC | + |
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Preference number: 3 (lower is better) Translates to: AFFLPCQEELKPLHFMCSGWKLE*VARSWS Trigger: GCTCCACGATCTAGCCACCAACTCCAGTTTCCAGCC...AGAGCACATGAAATGCAAGGGCTTCAGCTCTTCCTGACAGGGAAGAAAGAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR TCA 72 bp | ACAAAGGGCCCCAGGCAAGCAGTGCTTCGGCTATTCTaGGCACTGCCTGAAGTGATAGAGATAAAGGGAGCA | + |
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Preference number: 3 (lower is better) Translates to: TKGPRQAVLRLF*ALPEVIEIKGA Trigger: TGCTCCCTTTATCTCTATCACTTCAGGCAGTGCTCAGAATAGCCGAAGCACTGCTTGCCTGGGGCCCTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR-3UTR CAA 90 bp | TTCTTTCTTCCCTGTCAGGAAGAGCTGAAGCCCTTGCATTTCATGTGCTCTGCGCTCCTGCCAGCTACTTaGCTCCAAACCAGAAGTGTG | + |
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Preference number: 3 (lower is better) Translates to: FFLPCQEELKPLHFMCSALLPAT*LQTRSV Trigger: CACACTTCTGGTTTGGAGCAAAGTAGCTGGCAGGAG...CGCAGAGCACATGAAATGCAAGGGCTTCAGCTCTTCCTGACAGGGAAGAAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR TCA 72 bp | TGGCCCAGCCACTGCTTCAACTTTGCAGCAAGTAACTaGTTCAGTTCAGTAACAGTCCCAAGGCAGAGGTGC | + |
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Preference number: 3 (lower is better) Translates to: WPSHCFNFAASN*FSSVTVPRQRC Trigger: GCACCTCTGCCTTGGGACTGTTACTGAACTGAATCAGTTACTTGCTGCAAAGTTGAAGCAGTGGCTGGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR GCA 72 bp | TGCTCCTGCCAGCTACTTTGCTCCAAACCAGAAGTGTaGAGGGACCATGTGCAGAGTAGCAAATGTGACTTC | + |
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Preference number: 3 (lower is better) Translates to: CSCQLLCSKPEV*RDHVQSSKCDF Trigger: GAAGTCACATTTGCTACTCTGCACATGGTCCCTGCACACTTCTGGTTTGGAGCAAAGTAGCTGGCAGGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR GCA 72 bp | GCACCTGCTAAGTCCTCAGCTGGTCAGCCCAGGCTGTaGCCATTTCAAGATCCAAACAATAACTGGGTTCTT | + |
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Preference number: 3 (lower is better) Translates to: APAKSSAGQPRL*PFQDPNNNWVL Trigger: AAGAACCCAGTTATTGTTTGGATCTTGAAATGGGCACAGCCTGGGCTGACCAGCTGAGGACTTAGCAGGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR TCA 72 bp | GCTGTTAATGGGAACAGTATGTACCTGATACCATGCTaGTGCTATCGGGAGTGGGAGGAGCTGAGGGAAAGA | + |
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Preference number: 3 (lower is better) Translates to: AVNGNSMYLIPC*CYREWEELRER Trigger: TCTTTCCCTCAGCTCCTCCCACTCCCGATAGCATCAGCATGGTATCAGGTACATACTGTTCCCATTAACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR TCA 72 bp | GATCCAAACAATAACTGGGTTCTTCTCACCTTCCCCTaGGAAGGAAAGGGCCATGGTGCCCTCAGTGTAACA | + |
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Preference number: 3 (lower is better) Translates to: DPNNNWVLLTFP*EGKGHGALSVT Trigger: TGTTACACTGAGGGCACCATGGCCCTTTCCTTCTCAGGGGAAGGTGAGAAGAACCCAGTTATTGTTTGGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR CCA 72 bp | TCTTTCACACATTCCGGGTCCCAGTGTGAGGCAGCTTaGATAGGCAATGCCACCAGAATGCTTGCTAACAAA | + |
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Preference number: 3 (lower is better) Translates to: SFTHSGSQCEAA*IGNATRMLANK Trigger: TTTGTTAGCAAGCATTCTGGTGGCATTGCCTATCCAAGCTGCCTCACACTGGGACCCGGAATGTGTGAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR GCA 72 bp | TACTTTGCTCCAAACCAGAAGTGTGCAGGGACCATGTaGAGAGTAGCAAATGTGACTTCTTGGCTAAAGGGG | + |
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Preference number: 3 (lower is better) Translates to: YFAPNQKCAGTM*RVANVTSWLKG Trigger: CCCCTTTAGCCAAGAAGTCACATTTGCTACTCTGCACATGGTCCCTGCACACTTCTGGTTTGGAGCAAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR TCA 72 bp | TTCATGAAACTGCTGTTAATGGGAACAGTATGTACCTaGTACCATGCTGATGCTATCGGGAGTGGGAGGAGC | + |
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Preference number: 3 (lower is better) Translates to: FMKLLLMGTVCT*YHADAIGSGRS Trigger: GCTCCTCCCACTCCCGATAGCATCAGCATGGTATCAGGTACATACTGTTCCCATTAACAGCAGTTTCATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR CCA 72 bp | CAGTTCAGTAACAGTCCCAAGGCAGAGGTGCTTAACTaGCATCCTCTACTCAAACTCACTTTTCTGCCCAAA | + |
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Preference number: 3 (lower is better) Translates to: QFSNSPKAEVLN*HPLLKLTFLPK Trigger: TTTGGGCAGAAAAGTGAGTTTGAGTAGAGGATGCCAGTTAAGCACCTCTGCCTTGGGACTGTTACTGAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR TCA 72 bp | GAGCAGACCACACTTTTAATTATATATCTGAAAATGTaGCAGGTCACCACACGGAACAGAAGCCTCCGAGGA | + |
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Preference number: 3 (lower is better) Translates to: EQTTLLIIYLKM*QVTTRNRSLRG Trigger: TCCTCGGAGGCTTCTGTTCCGTGTGGTGACCTGTCACATTTTCAGATATATAATTAAAAGTGTGGTCTGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| CDS-3UTR CCA 90 bp | CCCTCTTTCACACATTCCGGGTCCCAGTGTGAGGCAGCTTGGATAGGCAATGCCGCGGTGGTGGCGGCTTaGACTCCGGCAGCAGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: PSFTHSGSQCEAAWIGNAAVVAA*TPAAAR Trigger: CCGAGCTGCTGCCGGAGTCCAAGCCGCCACCACCGC...GGCATTGCCTATCCAAGCTGCCTCACACTGGGACCCGGAATGTGTGAAAGAGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| CDS-3UTR CCA 90 bp | CAGCTATTTCCTCTCCCTCTGTGCCCTGTAGATCTGCTGGGACATGGTCAGGGCTGCTCGGGGCTCACGTaGATGCCGGGCATGGTGCCG | + |
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Preference number: 4 (lower is better) Translates to: QLFPLPLCPVDLLGHGQGCSGLT*MPGMVP Trigger: CGGCACCATGCCCGGCATCCACGTGAGCCCCGAGCA...GCCCTGACCATGTCCCAGCAGATCTACAGGGCACAGAGGGAGAGGAAATAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| CDS-3UTR CCA 90 bp | AGAAGGGAACAGCTATTTCCTCTCCCTCTGTGCCCTGTAGATCTGCTGGGACATAGGCTGAGGCGGTGGTaGCGGCTTGGACTCCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: RREQLFPLPLCPVDLLGHRLRRW*RLGLRQ Trigger: CTGCCGGAGTCCAAGCCGCCACCACCGCCTCAGCCT...ATGTCCCAGCAGATCTACAGGGCACAGAGGGAGAGGAAATAGCTGTTCCCTTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| CDS-3UTR CCA 90 bp | GCCTTCTTTCTTCCCTGTCAGGAAGAGCTGAAGCCCTTGCATTTCATGTGCTCTCAGAGGCTGAGGCGGTaGTGGCGGCTTGGACTCCGG | + |
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Preference number: 4 (lower is better) Translates to: AFFLPCQEELKPLHFMCSQRLRR*WRLGLR Trigger: CCGGAGTCCAAGCCGCCACCACCGCCTCAGCCTCTG...AGAGCACATGAAATGCAAGGGCTTCAGCTCTTCCTGACAGGGAAGAAAGAAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| CDS-3UTR CCA 90 bp | GAGAAACTGCCCCGATTGCTCCTGCCAGCTACTTTGCTCCAAACCAGAAGTGTGAGGGCGTTCAGGTCCTaGTGGAGATCCGGGCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: EKLPRLLLPATLLQTRSVRAFRS*WRSGLS Trigger: GGACAGCCCGGATCTCCACCAGGACCTGAACGCCCT...CACACTTCTGGTTTGGAGCAAAGTAGCTGGCAGGAGCAATCGGGGCAGTTTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR CAA 72 bp | ACGAATCAGGGCAGAGCCGCTTCCTTAACAGCCTCTTaGAGCCAGTGTGGGAAGGACAAAGGGCCCCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: TNQGRAASLTAS*SQCGKDKGPQA Trigger: TGCCTGGGGCCCTTTGTCCTTCCCACACTGGCTCAAAGAGGCTGTTAAGGAAGCGGCTCTGCCCTGATTCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| CDS-3UTR GCA 90 bp | AGGGAGAAGCCACCCACCCTCTGGCCTTTCAAAACAATGTTCATACTCTCACAGAGGCTGTGGAGCTGCTaGTGCTGCTGCTCGGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: REKPPTLWPFKTMFILSQRLWSC*CCCSGL Trigger: GAGCCCCGAGCAGCAGCAGCAGCAGCTCCACAGCCT...CTGTGAGAGTATGAACATTGTTTTGAAAGGCCAGAGGGTGGGTGGCTTCTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| CDS-3UTR TCA 90 bp | GTTTCAAGGGAGAAGCCACCCACCCTCTGGCCTTTCAAAACAATGTTCATACTCCGGGCATGGTGCCGATaGGCTTCCGCAGCTCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: VSREKPPTLWPFKTMFILRAWCR*ASAAPG Trigger: TCCAGGAGCTGCGGAAGCTCATCGGCACCATGCCCG...GAGTATGAACATTGTTTTGAAAGGCCAGAGGGTGGGTGGCTTCTCCCTTGAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR CAA 72 bp | GCTGAGAAACTGCCCCGATTGCTCCTGCCAGCTACTTaGCTCCAAACCAGAAGTGTGCAGGGACCATGTGCA | + |
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Preference number: 4 (lower is better) Translates to: AEKLPRLLLPAT*LQTRSVQGPCA Trigger: TGCACATGGTCCCTGCACACTTCTGGTTTGGAGCAAAGTAGCTGGCAGGAGCAATCGGGGCAGTTTCTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| CDS-3UTR GCA 90 bp | ACTCAAACTCACTTTTCTGCCCAAATACCTGGAAGTCAGAACCCTCTTTCACACCTGTGGAGCTGCTGCTaGTGCTGCTCGGGGCTCACG | + |
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Preference number: 4 (lower is better) Translates to: TQTHFSAQIPGSQNPLSHLWSCC*CCSGLT Trigger: CGTGAGCCCCGAGCAGCAGCAGCAGCAGCTCCACAG...GTGTGAAAGAGGGTTCTGACTTCCAGGTATTTGGGCAGAAAAGTGAGTTTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| CDS-3UTR TCA 90 bp | AAGTCCTCAGCTGGTCAGCCCAGGCTGTGCCCATTTCAAGATCCAAACAATAACCCTGGAACTTGGTTTTaGGGGCGTTCAGGTCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: KSSAGQPRLCPFQDPNNNPGTWF*GRSGPG Trigger: ACCAGGACCTGAACGCCCTCAAAACCAAGTTCCAGG...GTTATTGTTTGGATCTTGAAATGGGCACAGCCTGGGCTGACCAGCTGAGGACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| CDS-3UTR GCA 90 bp | AGAATGCTTGCTAACAAACATCCCCAGCCAGCGCTCCTGCCAAGAAGGCCAGTTAGGCTCTTGTACTTCTaGAGCAGCTCGTTCTTGGTC | + |
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Preference number: 4 (lower is better) Translates to: RMLANKHPQPALLPRRPVRLLYF*SSSFLV Trigger: GACCAAGAACGAGCTGCTGCAGAAGTACAAGAGCCT...AACTGGCCTTCTTGGCAGGAGCGCTGGCTGGGGATGTTTGTTAGCAAGCATTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR CAA 72 bp | TGCAGGGACCATGTGCAGAGTAGCAAATGTGACTTCTaGGCTAAAGGGGAGACAGAGGTAAGCCAGGGCATA | + |
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Preference number: 4 (lower is better) Translates to: CRDHVQSSKCDF*AKGETEVSQGI Trigger: TATGCCCTGGCTTACCTCTGTCTCCCCTTTAGCCAAGAAGTCACATTTGCTACTCTGCACATGGTCCCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| 3UTR CAA 72 bp | GCCTTCTTTCTTCCCTGTCAGGAAGAGCTGAAGCCCTaGCATTTCATGTGCTCTGCGCTTACAGGAACCAGT | + |
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Preference number: 4 (lower is better) Translates to: AFFLPCQEELKP*HFMCSALTGTS Trigger: ACTGGTTCCTGTAAGCGCAGAGCACATGAAATGCAAGGGCTTCAGCTCTTCCTGACAGGGAAGAAAGAAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| CDS-3UTR GCA 90 bp | ATGCTATCGGGAGTGGGAGGAGCTGAGGGAAAGAAGGGAACAGCTATTTCCTCTTGGGGATCTCAAACATaGAGAGGCTCTTGTACTTCT | + |
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Preference number: 4 (lower is better) Translates to: MLSGVGGAEGKKGTAISSWGSQT*RGSCTS Trigger: AGAAGTACAAGAGCCTCTGCATGTTTGAGATCCCCA...AGAGGAAATAGCTGTTCCCTTCTTTCCCTCAGCTCCTCCCACTCCCGATAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| CDS TCA 90 bp | GGCCGCGGAGCCGCCGGCGGCGGGAGCGCAGCGACCGGCAGAGGCTaGGGCGGTGGTGGCGGCTTGGACTCCGGCAGCAGCTCGGGCGGT | + |
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Preference number: 5 (lower is better) Translates to: GRGAAGGGSAATGRG*GGGGGLDSGSSSGG Trigger: ACCGCCCGAGCTGCTGCCGGAGTCCAAGCCGCCACCACCGCCTCAGCCTCTGCCGGTCGCTGCGCTCCCGCCGCCGGCGGCTCCGCGGCC 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| CDS CCA 90 bp | GCGGGAGCGCAGCGACCGGCAGAGGCTGAGGCGGTGGTGGCGGCTTaGACTCCGGCAGCAGCTCGGGCGGTGGCTGTAGCGTATCTTCGG | + |
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Preference number: 5 (lower is better) Translates to: AGAQRPAEAEAVVAA*TPAAARAVAVAYLR Trigger: CCGAAGATACGCTACAGCCACCGCCCGAGCTGCTGCCGGAGTCCAAGCCGCCACCACCGCCTCAGCCTCTGCCGGTCGCTGCGCTCCCGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| CDS CCA 90 bp | TTCTGCAGCAGCTCGTTCTTGGTCCTCACTTGCTCTCGGAGGCTGTaGAGCTGCTGCTGCTGCTGCTCGGGGCTCACGTGGATGCCGGGC | + |
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Preference number: 5 (lower is better) Translates to: FCSSSFLVLTCSRRL*SCCCCCSGLTWMPG Trigger: GCCCGGCATCCACGTGAGCCCCGAGCAGCAGCAGCAGCAGCTCCACAGCCTCCGAGAGCAAGTGAGGACCAAGAACGAGCTGCTGCAGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| CDS-3UTR CAA 90 bp | CAGCTATTTCCTCTCCCTCTGTGCCCTGTAGATCTGCTGGGACATGGTCAGGGCGGCGGTGGTGGCGGCTaGGACTCCGGCAGCAGCTCG | + |
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Preference number: 5 (lower is better) Translates to: QLFPLPLCPVDLLGHGQGGGGGG*DSGSSS Trigger: CGAGCTGCTGCCGGAGTCCAAGCCGCCACCACCGCC...GCCCTGACCATGTCCCAGCAGATCTACAGGGCACAGAGGGAGAGGAAATAGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| CDS GCA 90 bp | CAGAGGCTCTTGTACTTCTGCAGCAGCTCGTTCTTGGTCCTCACTTaGTCTCGGAGGCTGTGGAGCTGCTGCTGCTGCTGCTCGGGGCTC | + |
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Preference number: 5 (lower is better) Translates to: QRLLYFCSSSFLVLT*SRRLWSCCCCCSGL Trigger: GAGCCCCGAGCAGCAGCAGCAGCAGCTCCACAGCCTCCGAGAGCAAGTGAGGACCAAGAACGAGCTGCTGCAGAAGTACAAGAGCCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| CDS-3UTR CAA 90 bp | TGCTTGCTAACAAACATCCCCAGCCAGCGCTCCTGCCAAGAAGGCCAGTTGGCAAACATGCAGAGGCTCTaGTACTTCTGCAGCAGCTCG | + |
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Preference number: 5 (lower is better) Translates to: CLLTNIPSQRSCQEGQLANMQRL*YFCSSS Trigger: CGAGCTGCTGCAGAAGTACAAGAGCCTCTGCATGTT...TGCCAACTGGCCTTCTTGGCAGGAGCGCTGGCTGGGGATGTTTGTTAGCAAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| CDS-3UTR CAA 90 bp | AGCCACCCACCCTCTGGCCTTTCAAAACAATGTTCATACTCTCACAGCTTGCTTAGATCCGGGCTGTCCTaGTCCATGCATTTGATGACA | + |
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Preference number: 5 (lower is better) Translates to: SHPPSGLSKQCSYSHSLLRSGLS*SMHLMT Trigger: TGTCATCAAATGCATGGACAAGGACAGCCCGGATCT...AAGCAAGCTGTGAGAGTATGAACATTGTTTTGAAAGGCCAGAGGGTGGGTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| CDS CCA 72 bp | CGGCGGGAGCGCAGCGACCGGCAGAGGCTGAGGCGGTaGTGGCGGCTTGGACTCCGGCAGCAGCTCGGGCGG | + |
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Preference number: 6 (lower is better) Translates to: RRERSDRQRLRR*WRLGLRQQLGR Trigger: CCGCCCGAGCTGCTGCCGGAGTCCAAGCCGCCACCACCGCCTCAGCCTCTGCCGGTCGCTGCGCTCCCGCCG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| CDS CCA 72 bp | CGGGAGCGCAGCGACCGGCAGAGGCTGAGGCGGTGGTaGCGGCTTGGACTCCGGCAGCAGCTCGGGCGGTGG | + |
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Preference number: 6 (lower is better) Translates to: RERSDRQRLRRW*RLGLRQQLGRW Trigger: CCACCGCCCGAGCTGCTGCCGGAGTCCAAGCCGCCACCACCGCCTCAGCCTCTGCCGGTCGCTGCGCTCCCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| CDS CCA 72 bp | CTGTGGAGCTGCTGCTGCTGCTGCTCGGGGCTCACGTaGATGCCGGGCATGGTGCCGATGAGCTTCCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: LWSCCCCCSGLT*MPGMVPMSFRS Trigger: GCTGCGGAAGCTCATCGGCACCATGCCCGGCATCCACGTGAGCCCCGAGCAGCAGCAGCAGCAGCTCCACAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| CDS GCA 72 bp | TTGGTCCTCACTTGCTCTCGGAGGCTGTGGAGCTGCTaGTGCTGCTGCTCGGGGCTCACGTGGATGCCGGGC | + |
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Preference number: 6 (lower is better) Translates to: LVLTCSRRLWSC*CCCSGLTWMPG Trigger: GCCCGGCATCCACGTGAGCCCCGAGCAGCAGCAGCAGCAGCTCCACAGCCTCCGAGAGCAAGTGAGGACCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| CDS CAA 90 bp | GCAGAGGCTCTTGTACTTCTGCAGCAGCTCGTTCTTGGTCCTCACTaGCTCTCGGAGGCTGTGGAGCTGCTGCTGCTGCTGCTCGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: AEALVLLQQLVLGPH*LSEAVELLLLLLGA Trigger: AGCCCCGAGCAGCAGCAGCAGCAGCTCCACAGCCTCCGAGAGCAAGTGAGGACCAAGAACGAGCTGCTGCAGAAGTACAAGAGCCTCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| CDS GCA 72 bp | TTGTACTTCTGCAGCAGCTCGTTCTTGGTCCTCACTTaGTCTCGGAGGCTGTGGAGCTGCTGCTGCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: LYFCSSSFLVLT*SRRLWSCCCCC Trigger: GCAGCAGCAGCAGCAGCTCCACAGCCTCCGAGAGCAAGTGAGGACCAAGAACGAGCTGCTGCAGAAGTACAA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| CDS CCA 72 bp | TGCAGAGGCTCTTGTACTTCTGCAGCAGCTCGTTCTTaGTCCTCACTTGCTCTCGGAGGCTGTGGAGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: CRGSCTSAAARS*SSLALGGCGAA Trigger: AGCAGCTCCACAGCCTCCGAGAGCAAGTGAGGACCAAGAACGAGCTGCTGCAGAAGTACAAGAGCCTCTGCA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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| CDS CAA 72 bp | ATGCAGAGGCTCTTGTACTTCTGCAGCAGCTCGTTCTaGGTCCTCACTTGCTCTCGGAGGCTGTGGAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: MQRLLYFCSSSF*VLTCSRRLWSC Trigger: GCAGCTCCACAGCCTCCGAGAGCAAGTGAGGACCAAGAACGAGCTGCTGCAGAAGTACAAGAGCCTCTGCAT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081980.7 |
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