Pregenerated sensors for MED8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006392Ensembl transcript IDs: ENSMUST00000019229.15, ENSMUST00000073881.8, ENSMUST00000084319.11, ENSMUST00000106384.10, ENSMUST00000144577.2
Found 164 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGCCAGCAGGCCGTACTTGGGCAGGAGGGCCTGCAGAGACAGTATaGCCCCAACACATACAGGCCACCATGGATAACTTGATCCTGGGC | + |
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Preference number: 1 (lower is better) Translates to: GPAGRTWAGGPAETV*PQHIQATMDNLILG Trigger: GCCCAGGATCAAGTTATCCATGGTGGCCTGTATGTGTTGGGGGCATACTGTCTCTGCAGGCCCTCCTGCCCAAGTACGGCCTGCTGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| 3UTR GCA 90 bp | AACACAACTGCCCTCCACGGAGGAAGACAGTATTCTCCGTGCTGTTaGCTGCCAGAGTCCCTCTTAAGAGCTCTTCCACCTGCTGGACCC | + |
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Preference number: 1 (lower is better) Translates to: NTTALHGGRQYSPCC*LPESLLRALPPAGP Trigger: GGGTCCAGCAGGTGGAAGAGCTCTTAAGAGGGACTCTGGCAGGCAACAGCACGGAGAATACTGTCTTCCTCCGTGGAGGGCAGTTGTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| 3UTR CCA 90 bp | TGCCTGCCAGAGTCCCTCTTAAGAGCTCTTCCACCTGCTGGACCCTaGGCATCTTTAGCAGCACAGGAGGCTAAAAGATGGGCATGTTTA | + |
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Preference number: 1 (lower is better) Translates to: CLPESLLRALPPAGP*ASLAAQEAKRWACL Trigger: TAAACATGCCCATCTTTTAGCCTCCTGTGCTGCTAAAGATGCCCAGGGTCCAGCAGGTGGAAGAGCTCTTAAGAGGGACTCTGGCAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| 3UTR TCA 90 bp | CCAATTCTGCTGACTCAATCTCTGCCCTTGCCCAGAAAAGAACGCTaGGAAAGGCAACAGGCCTGGCTGTCCAAAACTCCACTGTTCGTC | + |
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Preference number: 1 (lower is better) Translates to: PILLTQSLPLPRKER*ERQQAWLSKTPLFV Trigger: GACGAACAGTGGAGTTTTGGACAGCCAGGCCTGTTGCCTTTCTCAGCGTTCTTTTCTGGGCAAGGGCAGAGATTGAGTCAGCAGAATTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| 3UTR TCA 90 bp | CCCTTCCCACTTTCAATCCAGATCTTATCTGAGCCACACGTTCAGTaGGATGGAAGAGGACAGAGACAGGGAGTCGTCACTGTGCAGACA | + |
|
Preference number: 1 (lower is better) Translates to: PFPLSIQILSEPHVQ*DGRGQRQGVVTVQT Trigger: TGTCTGCACAGTGACGACTCCCTGTCTCTGTCCTCTTCCATCTCACTGAACGTGTGGCTCAGATAAGATCTGGATTGAAAGTGGGAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| 3UTR TCA 90 bp | ATGAATGGAGCTGCTGCCCTTCCCACTTTCAATCCAGATCTTATCTaGGCCACACGTTCAGTGAGATGGAAGAGGACAGAGACAGGGAGT | + |
|
Preference number: 1 (lower is better) Translates to: MNGAAALPTFNPDLI*ATRSVRWKRTETGS Trigger: ACTCCCTGTCTCTGTCCTCTTCCATCTCACTGAACGTGTGGCTCAGATAAGATCTGGATTGAAAGTGGGAAGGGCAGCAGCTCCATTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| 3UTR GCA 90 bp | ACGTTCAGTGAGATGGAAGAGGACAGAGACAGGGAGTCGTCACTGTaGAGACAAATGAACCCCAACCCACGGCACTATAAAACACAACTG | + |
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Preference number: 1 (lower is better) Translates to: TFSEMEEDRDRESSL*RQMNPNPRHYKTQL Trigger: CAGTTGTGTTTTATAGTGCCGTGGGTTGGGGTTCATTTGTCTGCACAGTGACGACTCCCTGTCTCTGTCCTCTTCCATCTCACTGAACGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| 3UTR CCA 90 bp | CTAAAAGATGGGCATGTTTACCTATTTCCCAGGGAAATGCTGAGCTaGTCTCATCACACCTGGAAGTGGCCAGTGTCCTCCAGAAACCTC | + |
|
Preference number: 1 (lower is better) Translates to: LKDGHVYLFPREMLS*SHHTWKWPVSSRNL Trigger: GAGGTTTCTGGAGGACACTGGCCACTTCCAGGTGTGATGAGACCAGCTCAGCATTTCCCTGGGAAATAGGTAAACATGCCCATCTTTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| 3UTR TCA 90 bp | TGTCCAAAACTCCACTGTTCGTCAACTCTACAAAAGCAGGCAATATaGATGGAGCTGCTGCCCTTCCCACTTTCAATCCAGATCTTATCT | + |
|
Preference number: 1 (lower is better) Translates to: CPKLHCSSTLQKQAI*MELLPFPLSIQILS Trigger: AGATAAGATCTGGATTGAAAGTGGGAAGGGCAGCAGCTCCATTCATATTGCCTGCTTTTGTAGAGTTGACGAACAGTGGAGTTTTGGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| 3UTR CAA 90 bp | AAACACAACTGCCCTCCACGGAGGAAGACAGTATTCTCCGTGCTGTaGCCTGCCAGAGTCCCTCTTAAGAGCTCTTCCACCTGCTGGACC | + |
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Preference number: 2 (lower is better) Translates to: KHNCPPRRKTVFSVL*PARVPLKSSSTCWT Trigger: GGTCCAGCAGGTGGAAGAGCTCTTAAGAGGGACTCTGGCAGGCAACAGCACGGAGAATACTGTCTTCCTCCGTGGAGGGCAGTTGTGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| 3UTR-3UTR TCA 90 bp | GCAGGCCGTACTTGGGCAGGAGGGCCTGCAGAGACAGTATGCCCCCAACACATAAGATCTGTCTCTTGCTaGAAGCCTGTGTTCTTTTTA | + |
|
Preference number: 2 (lower is better) Translates to: AGRTWAGGPAETVCPQHIRSVSC*KPVFFL Trigger: TAAAAAGAACACAGGCTTTCAGCAAGAGACAGATCT...TATGTGTTGGGGGCATACTGTCTCTGCAGGCCCTCCTGCCCAAGTACGGCCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| 3UTR-3UTR GCA 90 bp | CTGTTCGTCAACTCTACAAAAGCAGGCAATATGAATGGAGCTGCTGCCCTTCCCCCTGCAGAGACAGTATaGCCCCAACACATACAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: LFVNSTKAGNMNGAAALPPAETV*PQHIQA Trigger: GGCCTGTATGTGTTGGGGGCATACTGTCTCTGCAGG...GGGAAGGGCAGCAGCTCCATTCATATTGCCTGCTTTTGTAGAGTTGACGAACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| 3UTR-3UTR GCA 90 bp | TGCCCAGAAAAGAACGCTGAGAAAGGCAACAGGCCTGGCTGTCCAAAACTCCACTATGAATGGAGCTGCTaGCCTTCCCACTTTCAATCC | + |
|
Preference number: 2 (lower is better) Translates to: CPEKNAEKGNRPGCPKLHYEWSC*PSHFQS Trigger: GGATTGAAAGTGGGAAGGGCAGCAGCTCCATTCATA...GTGGAGTTTTGGACAGCCAGGCCTGTTGCCTTTCTCAGCGTTCTTTTCTGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| 3UTR CAA 90 bp | CCCCAACACATACAGGCCACCATGGATAACTTGATCCTGGGCCCATaGGCTCACTGGTGTCATGGAGATGAACCAAATCACAATAAGTTC | + |
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Preference number: 2 (lower is better) Translates to: PQHIQATMDNLILGP*AHWCHGDEPNHNKF Trigger: GAACTTATTGTGATTTGGTTCATCTCCATGACACCAGTGAGCCAATGGGCCCAGGATCAAGTTATCCATGGTGGCCTGTATGTGTTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| 3UTR-3UTR GCA 90 bp | ATGCTGAGCTGGTCTCATCACACCTGGAAGTGGCCAGTGTCCTCCAGAAACCTCTTCAAGACCCAGAATTaGATACACCATGCTAAGTGT | + |
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Preference number: 2 (lower is better) Translates to: MLSWSHHTWKWPVSSRNLFKTQN*IHHAKC Trigger: ACACTTAGCATGGTGTATGCAATTCTGGGTCTTGAA...GAGGTTTCTGGAGGACACTGGCCACTTCCAGGTGTGATGAGACCAGCTCAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| 3UTR-3UTR TCA 90 bp | CACTATAAAACACAACTGCCCTCCACGGAGGAAGACAGTATTCTCCGTGCTGTTAAGGAATGGCAGGGTTaGAAGGTAGGAAACTATCAT | + |
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Preference number: 2 (lower is better) Translates to: HYKTQLPSTEEDSILRAVKEWQG*KVGNYH Trigger: ATGATAGTTTCCTACCTTTCAACCCTGCCATTCCTT...AACAGCACGGAGAATACTGTCTTCCTCCGTGGAGGGCAGTTGTGTTTTATAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| 3UTR-3UTR TCA 90 bp | GAGAACACAGGCTCAGAAATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCAGATCTGTCTCTTGCTaGAAGCCTGTGTTCTTTTTA | + |
|
Preference number: 2 (lower is better) Translates to: ENTGSEILGHFPKFEWLFRSVSC*KPVFFL Trigger: TAAAAAGAACACAGGCTTTCAGCAAGAGACAGATCT...GAATAGCCATTCGAACTTGGGAAAGTGACCTAATATTTCTGAGCCTGTGTTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
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| 3UTR-3UTR TCA 90 bp | AGGCTCAGAAATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCACAGTGGAAGATCTGTCTCTTGCTaGAAGCCTGTGTTCTTTTTA | + |
|
Preference number: 2 (lower is better) Translates to: RLRNIRSLSQVRMAIHSGRSVSC*KPVFFL Trigger: TAAAAAGAACACAGGCTTTCAGCAAGAGACAGATCT...TCCACTGTGAATAGCCATTCGAACTTGGGAAAGTGACCTAATATTTCTGAGCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
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| 3UTR-3UTR TCA 90 bp | GGTGTCATGGAGATGAACCAAATCACAATAAGTTCTGCATATAGGACAAGGAATATCACCATCTACAAATaGGAACACAGGCTCAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: GVMEMNQITISSAYRTRNITIYK*EHRLRN Trigger: ATTTCTGAGCCTGTGTTCTCATTTGTAGATGGTGAT...ATTCCTTGTCCTATATGCAGAACTTATTGTGATTTGGTTCATCTCCATGACACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| 3UTR GCA 72 bp | GGCCGTACTTGGGCAGGAGGGCCTGCAGAGACAGTATaGCCCCAACACATACAGGCCACCATGGATAACTTG | + |
|
Preference number: 3 (lower is better) Translates to: GRTWAGGPAETV*PQHIQATMDNL Trigger: CAAGTTATCCATGGTGGCCTGTATGTGTTGGGGGCATACTGTCTCTGCAGGCCCTCCTGCCCAAGTACGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| 3UTR GCA 72 bp | GCCCTCCACGGAGGAAGACAGTATTCTCCGTGCTGTTaGCTGCCAGAGTCCCTCTTAAGAGCTCTTCCACCT | + |
|
Preference number: 3 (lower is better) Translates to: ALHGGRQYSPCC*LPESLLRALPP Trigger: AGGTGGAAGAGCTCTTAAGAGGGACTCTGGCAGGCAACAGCACGGAGAATACTGTCTTCCTCCGTGGAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| 3UTR CCA 72 bp | AGGGAAATGCTGAGCTGGTCTCATCACACCTGGAAGTaGCCAGTGTCCTCCAGAAACCTCCTCACCTGTAGC | + |
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Preference number: 3 (lower is better) Translates to: REMLSWSHHTWK*PVSSRNLLTCS Trigger: GCTACAGGTGAGGAGGTTTCTGGAGGACACTGGCCACTTCCAGGTGTGATGAGACCAGCTCAGCATTTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| 3UTR CCA 72 bp | TTTCCCAGGGAAATGCTGAGCTGGTCTCATCACACCTaGAAGTGGCCAGTGTCCTCCAGAAACCTCCTCACC | + |
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Preference number: 3 (lower is better) Translates to: FPREMLSWSHHT*KWPVSSRNLLT Trigger: GGTGAGGAGGTTTCTGGAGGACACTGGCCACTTCCAGGTGTGATGAGACCAGCTCAGCATTTCCCTGGGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| 3UTR TCA 72 bp | TATGCCCCCAACACATACAGGCCACCATGGATAACTTaGTCCTGGGCCCATTGGCTCACTGGTGTCATGGAG | + |
|
Preference number: 3 (lower is better) Translates to: YAPNTYRPPWIT*SWAHWLTGVME Trigger: CTCCATGACACCAGTGAGCCAATGGGCCCAGGATCAAGTTATCCATGGTGGCCTGTATGTGTTGGGGGCATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| 3UTR GCA 72 bp | ACAACTGCCCTCCACGGAGGAAGACAGTATTCTCCGTaGTGTTGCCTGCCAGAGTCCCTCTTAAGAGCTCTT | + |
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Preference number: 3 (lower is better) Translates to: TTALHGGRQYSP*CCLPESLLRAL Trigger: AAGAGCTCTTAAGAGGGACTCTGGCAGGCAACAGCACGGAGAATACTGTCTTCCTCCGTGGAGGGCAGTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| 3UTR CCA 72 bp | GGGCATGTTTACCTATTTCCCAGGGAAATGCTGAGCTaGTCTCATCACACCTGGAAGTGGCCAGTGTCCTCC | + |
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Preference number: 3 (lower is better) Translates to: GHVYLFPREMLS*SHHTWKWPVSS Trigger: GGAGGACACTGGCCACTTCCAGGTGTGATGAGACCAGCTCAGCATTTCCCTGGGAAATAGGTAAACATGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| 3UTR CCA 72 bp | GAGTCCCTCTTAAGAGCTCTTCCACCTGCTGGACCCTaGGCATCTTTAGCAGCACAGGAGGCTAAAAGATGG | + |
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Preference number: 3 (lower is better) Translates to: ESLLRALPPAGP*ASLAAQEAKRW Trigger: CCATCTTTTAGCCTCCTGTGCTGCTAAAGATGCCCAGGGTCCAGCAGGTGGAAGAGCTCTTAAGAGGGACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| 3UTR TCA 72 bp | CTGACTCAATCTCTGCCCTTGCCCAGAAAAGAACGCTaGGAAAGGCAACAGGCCTGGCTGTCCAAAACTCCA | + |
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Preference number: 3 (lower is better) Translates to: LTQSLPLPRKER*ERQQAWLSKTP Trigger: TGGAGTTTTGGACAGCCAGGCCTGTTGCCTTTCTCAGCGTTCTTTTCTGGGCAAGGGCAGAGATTGAGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| 3UTR-3UTR CAA 90 bp | CACTATAAAACACAACTGCCCTCCACGGAGGAAGACAGTATTCTCCGTGCTGTTTTGATCCTGGGCCCATaGGCTCACTGGTGTCATGGA | + |
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Preference number: 3 (lower is better) Translates to: HYKTQLPSTEEDSILRAVLILGP*AHWCHG Trigger: TCCATGACACCAGTGAGCCAATGGGCCCAGGATCAA...AACAGCACGGAGAATACTGTCTTCCTCCGTGGAGGGCAGTTGTGTTTTATAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| 3UTR TCA 72 bp | AGGACAGAGACAGGGAGTCGTCACTGTGCAGACAAATaGACCCCAACCCACGGCACTATAAAACACAACTGC | + |
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Preference number: 3 (lower is better) Translates to: RTETGSRHCADK*TPTHGTIKHNC Trigger: GCAGTTGTGTTTTATAGTGCCGTGGGTTGGGGTTCATTTGTCTGCACAGTGACGACTCCCTGTCTCTGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| 3UTR TCA 72 bp | AAGATGGGCATGTTTACCTATTTCCCAGGGAAATGCTaGGCTGGTCTCATCACACCTGGAAGTGGCCAGTGT | + |
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Preference number: 3 (lower is better) Translates to: KMGMFTYFPGKC*AGLITPGSGQC Trigger: ACACTGGCCACTTCCAGGTGTGATGAGACCAGCTCAGCATTTCCCTGGGAAATAGGTAAACATGCCCATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| 3UTR CCA 72 bp | CCCTGGGCATCTTTAGCAGCACAGGAGGCTAAAAGATaGGCATGTTTACCTATTTCCCAGGGAAATGCTGAG | + |
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Preference number: 3 (lower is better) Translates to: PWASLAAQEAKR*ACLPISQGNAE Trigger: CTCAGCATTTCCCTGGGAAATAGGTAAACATGCCCATCTTTTAGCCTCCTGTGCTGCTAAAGATGCCCAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| 3UTR TCA 72 bp | CTTTCAATCCAGATCTTATCTGAGCCACACGTTCAGTaGGATGGAAGAGGACAGAGACAGGGAGTCGTCACT | + |
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Preference number: 3 (lower is better) Translates to: LSIQILSEPHVQ*DGRGQRQGVVT Trigger: AGTGACGACTCCCTGTCTCTGTCCTCTTCCATCTCACTGAACGTGTGGCTCAGATAAGATCTGGATTGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| 3UTR TCA 72 bp | CTCCACTGTTCGTCAACTCTACAAAAGCAGGCAATATaGATGGAGCTGCTGCCCTTCCCACTTTCAATCCAG | + |
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Preference number: 3 (lower is better) Translates to: LHCSSTLQKQAI*MELLPFPLSIQ Trigger: CTGGATTGAAAGTGGGAAGGGCAGCAGCTCCATTCATATTGCCTGCTTTTGTAGAGTTGACGAACAGTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| 3UTR CCA 72 bp | GGCTCAGAAATATTAGGTCACTTTCCCAAGTTCGAATaGCTATTCACAGTGGAGCTGAGATCTGTCTCTTGC | + |
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Preference number: 3 (lower is better) Translates to: GSEILGHFPKFE*LFTVELRSVSC Trigger: GCAAGAGACAGATCTCAGCTCCACTGTGAATAGCCATTCGAACTTGGGAAAGTGACCTAATATTTCTGAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
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| 3UTR CCA 72 bp | ACTGTTCGTCAACTCTACAAAAGCAGGCAATATGAATaGAGCTGCTGCCCTTCCCACTTTCAATCCAGATCT | + |
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Preference number: 3 (lower is better) Translates to: TVRQLYKSRQYE*SCCPSHFQSRS Trigger: AGATCTGGATTGAAAGTGGGAAGGGCAGCAGCTCCATTCATATTGCCTGCTTTTGTAGAGTTGACGAACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| 3UTR TCA 72 bp | ACTTTCCCAAGTTCGAATGGCTATTCACAGTGGAGCTaGGATCTGTCTCTTGCTGAAAGCCTGTGTTCTTTT | + |
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Preference number: 3 (lower is better) Translates to: TFPSSNGYSQWS*DLSLAESLCSF Trigger: AAAAGAACACAGGCTTTCAGCAAGAGACAGATCTCAGCTCCACTGTGAATAGCCATTCGAACTTGGGAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
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| 3UTR TCA 72 bp | TGGCTATTCACAGTGGAGCTGAGATCTGTCTCTTGCTaGAAGCCTGTGTTCTTTTTATTGTCCCCATCTAAA | + |
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Preference number: 3 (lower is better) Translates to: WLFTVELRSVSC*KPVFFLLSPSK Trigger: TTTAGATGGGGACAATAAAAAGAACACAGGCTTTCAGCAAGAGACAGATCTCAGCTCCACTGTGAATAGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
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| 3UTR TCA 72 bp | TTTATTAAACAAAGAAACCCTTTGGCCCAATTCTGCTaGCTCAATCTCTGCCCTTGCCCAGAAAAGAACGCT | + |
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Preference number: 3 (lower is better) Translates to: FIKQRNPLAQFC*LNLCPCPEKNA Trigger: AGCGTTCTTTTCTGGGCAAGGGCAGAGATTGAGTCAGCAGAATTGGGCCAAAGGGTTTCTTTGTTTAATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| 3UTR TCA 72 bp | CAACCCTACGAGGTAGGTATTATCACCATCTACAAATaGGAACACAGGCTCAGAAATATTAGGTCACTTTCC | + |
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Preference number: 3 (lower is better) Translates to: QPYEVGIITIYK*EHRLRNIRSLS Trigger: GGAAAGTGACCTAATATTTCTGAGCCTGTGTTCTCATTTGTAGATGGTGATAATACCTACCTCGTAGGGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
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| 3UTR CAA 72 bp | TGCCCTCCACGGAGGAAGACAGTATTCTCCGTGCTGTaGCCTGCCAGAGTCCCTCTTAAGAGCTCTTCCACC | + |
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Preference number: 4 (lower is better) Translates to: CPPRRKTVFSVL*PARVPLKSSST Trigger: GGTGGAAGAGCTCTTAAGAGGGACTCTGGCAGGCAACAGCACGGAGAATACTGTCTTCCTCCGTGGAGGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| CDS-3UTR CCA 90 bp | GGCAGGAGGGCCTGCAGAGACAGTATGCCCCCAACACATACAGGCCACCATGGACATCAGCACCAATTCTaGCAGCATCTGTTGTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: GRRACRDSMPPTHTGHHGHQHQF*QHLLSA Trigger: AGCTGACAACAGATGCTGCCAGAATTGGTGCTGATG...TCCATGGTGGCCTGTATGTGTTGGGGGCATACTGTCTCTGCAGGCCCTCCTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| 3UTR CAA 72 bp | GTATGCCCCCAACACATACAGGCCACCATGGATAACTaGATCCTGGGCCCATTGGCTCACTGGTGTCATGGA | + |
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Preference number: 4 (lower is better) Translates to: VCPQHIQATMDN*ILGPLAHWCHG Trigger: TCCATGACACCAGTGAGCCAATGGGCCCAGGATCAAGTTATCCATGGTGGCCTGTATGTGTTGGGGGCATAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| CDS-3UTR CCA 90 bp | GCTGAGAAAGGCAACAGGCCTGGCTGTCCAAAACTCCACTGTTCGTCAACTCTAGAAAGTCTGCTTGTTTaGCCGGAGACCTCCGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: AEKGNRPGCPKLHCSSTLESLLV*PETSAL Trigger: GAGAGCGGAGGTCTCCGGCCAAACAAGCAGACTTTC...TAGAGTTGACGAACAGTGGAGTTTTGGACAGCCAGGCCTGTTGCCTTTCTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| CDS-3UTR GCA 90 bp | AAAAATCATGTCATTGCTCAACTCAGCACAGATCACCTGAGAGTGGAGGCTGCCGTTGCCCAGGACCACTaGTACCTGAAGGTCGCCAAT | + |
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Preference number: 4 (lower is better) Translates to: KNHVIAQLSTDHLRVEAAVAQDH*YLKVAN Trigger: ATTGGCGACCTTCAGGTAGCAGTGGTCCTGGGCAAC...GGCAGCCTCCACTCTCAGGTGATCTGTGCTGAGTTGAGCAATGACATGATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000084319.11 |
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| CDS-3UTR CCA 90 bp | AAAAATCATGTCATTGCTCAACTCAGCACAGATCACCTGAGAGTGGAGGCTGCCGAAAGTCTGCTTGTTTaGCCGGAGACCTCCGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KNHVIAQLSTDHLRVEAAESLLV*PETSAL Trigger: GAGAGCGGAGGTCTCCGGCCAAACAAGCAGACTTTC...GGCAGCCTCCACTCTCAGGTGATCTGTGCTGAGTTGAGCAATGACATGATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
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| CDS-3UTR TCA 90 bp | AAAAATCATGTCATTGCTCAACTCAGCACAGATCACCTGAGAGTGGAGGCTGCCTGGTGTCTCCAGGGTTaGAAGTCTGCTTGTTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: KNHVIAQLSTDHLRVEAAWCLQG*KSACLA Trigger: GGCCAAACAAGCAGACTTTCAACCCTGGAGACACCA...GGCAGCCTCCACTCTCAGGTGATCTGTGCTGAGTTGAGCAATGACATGATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR GCA 90 bp | AAAAATCATGTCATTGCTCAACTCAGCACAGATCACCTGAGAGTGGAGGCTGCCCCAGGGTTGAAAGTCTaGTTGTTTGGCCGGAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: KNHVIAQLSTDHLRVEAAPGLKV*LFGRRP Trigger: AGGTCTCCGGCCAAACAAGCAGACTTTCAACCCTGG...GGCAGCCTCCACTCTCAGGTGATCTGTGCTGAGTTGAGCAATGACATGATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR CCA 90 bp | AAAAATCATGTCATTGCTCAACTCAGCACAGATCACCTGAGAGTGGAGGCTGCCGGCTTGGTTCTCAAGTaGTCAGGAACGACCTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: KNHVIAQLSTDHLRVEAAGLVLK*SGTTSW Trigger: CCATGAGGTCGTTCCTGACCACTTGAGAACCAAGCC...GGCAGCCTCCACTCTCAGGTGATCTGTGCTGAGTTGAGCAATGACATGATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR TCA 90 bp | AAAAATCATGTCATTGCTCAACTCAGCACAGATCACCTGAGAGTGGAGGCTGCCGAGACCTCCGCTCTCTaGTTCTCGTTCTTCTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KNHVIAQLSTDHLRVEAAETSAL*FSFFFA Trigger: AGCAAAGAAGAACGAGAATCAGAGAGCGGAGGTCTC...GGCAGCCTCCACTCTCAGGTGATCTGTGCTGAGTTGAGCAATGACATGATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR TCA 90 bp | TCCCAAGTTCGAATGGCTATTCACAGTGGAGCTGAGATCTGTCTCTTGCTGAAATGGTGTCTCCAGGGTTaGAAGTCTGCTTGTTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SQVRMAIHSGAEICLLLKWCLQG*KSACLA Trigger: GGCCAAACAAGCAGACTTTCAACCCTGGAGACACCA...TTTCAGCAAGAGACAGATCTCAGCTCCACTGTGAATAGCCATTCGAACTTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR TCA 90 bp | ATGCTGAGCTGGTCTCATCACACCTGGAAGTGGCCAGTGTCCTCCAGAAACCTCGCATTGAAGCTGACTTaGTGTTGGTTTTTATTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: MLSWSHHTWKWPVSSRNLALKLT*CWFLFH Trigger: GTGGAATAAAAACCAACATCAAGTCAGCTTCAATGC...GAGGTTTCTGGAGGACACTGGCCACTTCCAGGTGTGATGAGACCAGCTCAGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
||
| CDS-3UTR GCA 90 bp | CTGTTCGTCAACTCTACAAAAGCAGGCAATATGAATGGAGCTGCTGCCCTTCCCCTGTCCAGAAAGCAATaGAAAGCTGTCCAGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LFVNSTKAGNMNGAAALPLSRKQ*KAVQDR Trigger: TCTGTCCTGGACAGCTTTGCATTGCTTTCTGGACAG...GGGAAGGGCAGCAGCTCCATTCATATTGCCTGCTTTTGTAGAGTTGACGAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
||
| CDS-3UTR GCA 90 bp | TCCCAAGTTCGAATGGCTATTCACAGTGGAGCTGAGATCTGTCTCTTGCTGAAACCAGGGTTGAAAGTCTaGTTGTTTGGCCGGAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: SQVRMAIHSGAEICLLLKPGLKV*LFGRRP Trigger: AGGTCTCCGGCCAAACAAGCAGACTTTCAACCCTGG...TTTCAGCAAGAGACAGATCTCAGCTCCACTGTGAATAGCCATTCGAACTTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR GCA 90 bp | CCACTGTTCGTCAACTCTACAAAAGCAGGCAATATGAATGGAGCTGCTGCCCTTCACCGCTGGTACGGATaGATTGAAGCTGACTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: PLFVNSTKAGNMNGAAALHRWYG*IEADLM Trigger: CATCAAGTCAGCTTCAATGCATCCGTACCAGCGGTG...AAGGGCAGCAGCTCCATTCATATTGCCTGCTTTTGTAGAGTTGACGAACAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
||
| CDS-3UTR CCA 90 bp | CCATTGGCTCACTGGTGTCATGGAGATGAACCAAATCACAATAAGTTCTGCATAGTCTTCGTCTCGGTCTaGGGACAGCACCAGAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PLAHWCHGDEPNHNKFCIVFVSV*GQHQRD Trigger: ATCCCTCTGGTGCTGTCCCCAGACCGAGACGAAGAC...TATGCAGAACTTATTGTGATTTGGTTCATCTCCATGACACCAGTGAGCCAATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
||
| CDS-3UTR TCA 90 bp | ATTCACAGTGGAGCTGAGATCTGTCTCTTGCTGAAAGCCTGTGTTCTTTTTATTGGAGCACCTGGCATCTaGACCTGCGGTAATCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: IHSGAEICLLLKACVLFIGAPGI*TCGNPE Trigger: CTCAGGATTACCGCAGGTTCAGATGCCAGGTGCTCC...AATAAAAAGAACACAGGCTTTCAGCAAGAGACAGATCTCAGCTCCACTGTGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000084319.11 |
||
| CDS-3UTR GCA 90 bp | AATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCACAGTGGAGCTGAGATCCCACTGAGCATTGGCTaGTGCTGGTTTGGAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: NIRSLSQVRMAIHSGAEIPLSIG*CWFGAP Trigger: AGGTGCTCCAAACCAGCAGCAGCCAATGCTCAGTGG...GATCTCAGCTCCACTGTGAATAGCCATTCGAACTTGGGAAAGTGACCTAATATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000084319.11 |
||
| CDS-3UTR GCA 90 bp | TCCCAAGTTCGAATGGCTATTCACAGTGGAGCTGAGATCTGTCTCTTGCTGAAACACCGCTGGTACGGATaGATTGAAGCTGACTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SQVRMAIHSGAEICLLLKHRWYG*IEADLM Trigger: CATCAAGTCAGCTTCAATGCATCCGTACCAGCGGTG...TTTCAGCAAGAGACAGATCTCAGCTCCACTGTGAATAGCCATTCGAACTTGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR CCA 90 bp | TCCCAAGTTCGAATGGCTATTCACAGTGGAGCTGAGATCTGTCTCTTGCTGAAATCAGGAACGACCTCATaGCTGAAAACAGGCACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SQVRMAIHSGAEICLLLKSGTTS*LKTGTR Trigger: ACGAGTGCCTGTTTTCAGCCATGAGGTCGTTCCTGA...TTTCAGCAAGAGACAGATCTCAGCTCCACTGTGAATAGCCATTCGAACTTGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR CCA 90 bp | TCCCAAGTTCGAATGGCTATTCACAGTGGAGCTGAGATCTGTCTCTTGCTGAAACTTCAGGGTCAGGCTTaGTTCTCAAGTGGTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SQVRMAIHSGAEICLLLKLQGQA*FSSGQE Trigger: TTCCTGACCACTTGAGAACCAAGCCTGACCCTGAAG...TTTCAGCAAGAGACAGATCTCAGCTCCACTGTGAATAGCCATTCGAACTTGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR CCA 90 bp | GCCCATTGGCTCACTGGTGTCATGGAGATGAACCAAATCACAATAAGTTCTGCACTTCAGGGTCAGGCTTaGTTCTCAAGTGGTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: AHWLTGVMEMNQITISSALQGQA*FSSGQE Trigger: TTCCTGACCACTTGAGAACCAAGCCTGACCCTGAAG...TGCAGAACTTATTGTGATTTGGTTCATCTCCATGACACCAGTGAGCCAATGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
||
| CDS-3UTR CCA 90 bp | GAGAACACAGGCTCAGAAATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCGAAAGTCTGCTTGTTTaGCCGGAGACCTCCGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ENTGSEILGHFPKFEWLFESLLV*PETSAL Trigger: GAGAGCGGAGGTCTCCGGCCAAACAAGCAGACTTTC...GAATAGCCATTCGAACTTGGGAAAGTGACCTAATATTTCTGAGCCTGTGTTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR CCA 90 bp | AGGCTCAGAAATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCACAGTGGAGAAAGTCTGCTTGTTTaGCCGGAGACCTCCGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RLRNIRSLSQVRMAIHSGESLLV*PETSAL Trigger: GAGAGCGGAGGTCTCCGGCCAAACAAGCAGACTTTC...TCCACTGTGAATAGCCATTCGAACTTGGGAAAGTGACCTAATATTTCTGAGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR CCA 90 bp | AGGCTCAGAAATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCACAGTGGATGGCTGCTGCTGGTTTaGAGCACCTGGCATCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RLRNIRSLSQVRMAIHSGWLLLV*STWHLN Trigger: GTTCAGATGCCAGGTGCTCCAAACCAGCAGCAGCCA...TCCACTGTGAATAGCCATTCGAACTTGGGAAAGTGACCTAATATTTCTGAGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000084319.11 |
||
| CDS-3UTR CCA 90 bp | AATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCACAGTGGAGCTGAGATCAGCATTGGCTGCTGCTaGTTTGGAGCACCTGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: NIRSLSQVRMAIHSGAEISIGCC*FGAPGI Trigger: GATGCCAGGTGCTCCAAACCAGCAGCAGCCAATGCT...GATCTCAGCTCCACTGTGAATAGCCATTCGAACTTGGGAAAGTGACCTAATATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000084319.11 |
||
| CDS-3UTR CCA 90 bp | AGGCTCAGAAATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCACAGTGGAAGCATTGGCTGCTGCTaGTTTGGAGCACCTGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: RLRNIRSLSQVRMAIHSGSIGCC*FGAPGI Trigger: GATGCCAGGTGCTCCAAACCAGCAGCAGCCAATGCT...TCCACTGTGAATAGCCATTCGAACTTGGGAAAGTGACCTAATATTTCTGAGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000084319.11 |
||
| CDS-3UTR CCA 90 bp | TCCCAAGTTCGAATGGCTATTCACAGTGGAGCTGAGATCTGTCTCTTGCTGAAAACTTGGCATTTTCCCTaGTTGACCTGCCTGAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SQVRMAIHSGAEICLLLKTWHFP*LTCLSH Trigger: ATGGCTCAGGCAGGTCAACCAGGGAAAATGCCAAGT...TTTCAGCAAGAGACAGATCTCAGCTCCACTGTGAATAGCCATTCGAACTTGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000084319.11 |
||
| CDS-3UTR TCA 90 bp | GAGAACACAGGCTCAGAAATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCTGGTGTCTCCAGGGTTaGAAGTCTGCTTGTTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ENTGSEILGHFPKFEWLFWCLQG*KSACLA Trigger: GGCCAAACAAGCAGACTTTCAACCCTGGAGACACCA...GAATAGCCATTCGAACTTGGGAAAGTGACCTAATATTTCTGAGCCTGTGTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR GCA 90 bp | AGGCTCAGAAATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCACAGTGGACCAGGGTTGAAAGTCTaGTTGTTTGGCCGGAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: RLRNIRSLSQVRMAIHSGPGLKV*LFGRRP Trigger: AGGTCTCCGGCCAAACAAGCAGACTTTCAACCCTGG...TCCACTGTGAATAGCCATTCGAACTTGGGAAAGTGACCTAATATTTCTGAGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR GCA 90 bp | AATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCACAGTGGAGCTGAGATCCCAGGGTTGAAAGTCTaGTTGTTTGGCCGGAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: NIRSLSQVRMAIHSGAEIPGLKV*LFGRRP Trigger: AGGTCTCCGGCCAAACAAGCAGACTTTCAACCCTGG...GATCTCAGCTCCACTGTGAATAGCCATTCGAACTTGGGAAAGTGACCTAATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR GCA 90 bp | AACACAGGCTCAGAAATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCACAGTTGCCCAGGACCACTaGTACCTGAAGGTCGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: NTGSEILGHFPKFEWLFTVAQDH*YLKVAN Trigger: ATTGGCGACCTTCAGGTAGCAGTGGTCCTGGGCAAC...TGTGAATAGCCATTCGAACTTGGGAAAGTGACCTAATATTTCTGAGCCTGTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000084319.11 |
||
| CDS-3UTR GCA 90 bp | ATTCACAGTGGAGCTGAGATCTGTCTCTTGCTGAAAGCCTGTGTTCTTTTTATTCCACTGAGCATTGGCTaGTGCTGGTTTGGAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: IHSGAEICLLLKACVLFIPLSIG*CWFGAP Trigger: AGGTGCTCCAAACCAGCAGCAGCCAATGCTCAGTGG...AATAAAAAGAACACAGGCTTTCAGCAAGAGACAGATCTCAGCTCCACTGTGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000084319.11 |
||
| CDS-3UTR GCA 90 bp | GAGAACACAGGCTCAGAAATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCTTTCCCTGGTTGACCTaGCTGAGCCATCTGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: ENTGSEILGHFPKFEWLFFPWLT*LSHLNS Trigger: GGAGTTCAGATGGCTCAGGCAGGTCAACCAGGGAAA...GAATAGCCATTCGAACTTGGGAAAGTGACCTAATATTTCTGAGCCTGTGTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000084319.11 |
||
| CDS-3UTR CCA 90 bp | AGGCTCAGAAATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCACAGTGGAGGCTTGGTTCTCAAGTaGTCAGGAACGACCTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: RLRNIRSLSQVRMAIHSGGLVLK*SGTTSW Trigger: CCATGAGGTCGTTCCTGACCACTTGAGAACCAAGCC...TCCACTGTGAATAGCCATTCGAACTTGGGAAAGTGACCTAATATTTCTGAGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR CCA 90 bp | AACACAGGCTCAGAAATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCACATGGCTGCTGCTGGTTTaGAGCACCTGGCATCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: NTGSEILGHFPKFEWLFTWLLLV*STWHLN Trigger: GTTCAGATGCCAGGTGCTCCAAACCAGCAGCAGCCA...TGTGAATAGCCATTCGAACTTGGGAAAGTGACCTAATATTTCTGAGCCTGTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000084319.11 |
||
| CDS-3UTR CCA 90 bp | GAGAACACAGGCTCAGAAATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCAACTCCACTGAGCATTaGCTGCTGCTGGTTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ENTGSEILGHFPKFEWLFNSTEH*LLLVWS Trigger: GCTCCAAACCAGCAGCAGCCAATGCTCAGTGGAGTT...GAATAGCCATTCGAACTTGGGAAAGTGACCTAATATTTCTGAGCCTGTGTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000084319.11 |
||
| CDS-3UTR TCA 90 bp | ATTCACAGTGGAGCTGAGATCTGTCTCTTGCTGAAAGCCTGTGTTCTTTTTATTGAACGACCTCATGGCTaGAAACAGGCACTCGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: IHSGAEICLLLKACVLFIERPHG*KQALVL Trigger: AAGGACGAGTGCCTGTTTTCAGCCATGAGGTCGTTC...AATAAAAAGAACACAGGCTTTCAGCAAGAGACAGATCTCAGCTCCACTGTGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR TCA 90 bp | AGGCTCAGAAATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCACAGTGGAGAGACCTCCGCTCTCTaGTTCTCGTTCTTCTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RLRNIRSLSQVRMAIHSGETSAL*FSFFFA Trigger: AGCAAAGAAGAACGAGAATCAGAGAGCGGAGGTCTC...TCCACTGTGAATAGCCATTCGAACTTGGGAAAGTGACCTAATATTTCTGAGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR TCA 90 bp | AATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCACAGTGGAGCTGAGATCGAGACCTCCGCTCTCTaGTTCTCGTTCTTCTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NIRSLSQVRMAIHSGAEIETSAL*FSFFFA Trigger: AGCAAAGAAGAACGAGAATCAGAGAGCGGAGGTCTC...GATCTCAGCTCCACTGTGAATAGCCATTCGAACTTGGGAAAGTGACCTAATATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR TCA 90 bp | TTATCACCATCTACAAATGAGAACACAGGCTCAGAAATATTAGGTCACTTTCCCCCATCTGAACTCCACTaGGCATTGGCTGCTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSPSTNENTGSEILGHFPPSELH*ALAAAG Trigger: ACCAGCAGCAGCCAATGCTCAGTGGAGTTCAGATGG...GGGAAAGTGACCTAATATTTCTGAGCCTGTGTTCTCATTTGTAGATGGTGATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000084319.11 |
||
| CDS-3UTR GCA 90 bp | AAAAATCATGTCATTGCTCAACTCAGCACAGATCACCTGAGAGTGGAGGCTGCCAGTGGCGTCTTCTCATaGTTTAAGACCTTGTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KNHVIAQLSTDHLRVEAASGVFS*FKTLFR Trigger: TCTGAACAAGGTCTTAAAGCATGAGAAGACGCCACT...GGCAGCCTCCACTCTCAGGTGATCTGTGCTGAGTTGAGCAATGACATGATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000106384.10 |
||
| CDS-3UTR GCA 90 bp | ATTCACAGTGGAGCTGAGATCTGTCTCTTGCTGAAAGCCTGTGTTCTTTTTATTTTTCCCTGGTTGACCTaGCTGAGCCATCTGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: IHSGAEICLLLKACVLFIFPWLT*LSHLNS Trigger: GGAGTTCAGATGGCTCAGGCAGGTCAACCAGGGAAA...AATAAAAAGAACACAGGCTTTCAGCAAGAGACAGATCTCAGCTCCACTGTGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000084319.11 |
||
| CDS-3UTR GCA 90 bp | AATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCACAGTGGAGCTGAGATCCACCGCTGGTACGGATaGATTGAAGCTGACTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: NIRSLSQVRMAIHSGAEIHRWYG*IEADLM Trigger: CATCAAGTCAGCTTCAATGCATCCGTACCAGCGGTG...GATCTCAGCTCCACTGTGAATAGCCATTCGAACTTGGGAAAGTGACCTAATATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR CCA 90 bp | GAGAACACAGGCTCAGAAATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCCTTCAGGGTCAGGCTTaGTTCTCAAGTGGTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ENTGSEILGHFPKFEWLFLQGQA*FSSGQE Trigger: TTCCTGACCACTTGAGAACCAAGCCTGACCCTGAAG...GAATAGCCATTCGAACTTGGGAAAGTGACCTAATATTTCTGAGCCTGTGTTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR CCA 90 bp | AGGCTCAGAAATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCACAGTGGAACTTGGCATTTTCCCTaGTTGACCTGCCTGAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RLRNIRSLSQVRMAIHSGTWHFP*LTCLSH Trigger: ATGGCTCAGGCAGGTCAACCAGGGAAAATGCCAAGT...TCCACTGTGAATAGCCATTCGAACTTGGGAAAGTGACCTAATATTTCTGAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000084319.11 |
||
| CDS-3UTR TCA 90 bp | TGGCTCACTGGTGTCATGGAGATGAACCAAATCACAATAAGTTCTGCATATAGGAATGAAACTCCCCAGTaGATTCTTCAGATCGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: WLTGVMEMNQITISSAYRNETPQ*ILQIGH Trigger: GTGGCCGATCTGAAGAATTCACTGGGGAGTTTCATT...CCTATATGCAGAACTTATTGTGATTTGGTTCATCTCCATGACACCAGTGAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
||
| CDS-3UTR TCA 90 bp | AACACAGGCTCAGAAATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCACAGAGACCTCCGCTCTCTaGTTCTCGTTCTTCTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NTGSEILGHFPKFEWLFTETSAL*FSFFFA Trigger: AGCAAAGAAGAACGAGAATCAGAGAGCGGAGGTCTC...TGTGAATAGCCATTCGAACTTGGGAAAGTGACCTAATATTTCTGAGCCTGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR TCA 90 bp | AAAAATCATGTCATTGCTCAACTCAGCACAGATCACCTGAGAGTGGAGGCTGCCGCATTGAAGCTGACTTaGTGTTGGTTTTTATTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KNHVIAQLSTDHLRVEAAALKLT*CWFLFH Trigger: GTGGAATAAAAACCAACATCAAGTCAGCTTCAATGC...GGCAGCCTCCACTCTCAGGTGATCTGTGCTGAGTTGAGCAATGACATGATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR GCA 90 bp | AACACAGGCTCAGAAATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCACAGTCAGCTGCTTCTCCTaGTCTTCAACTTCAGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NTGSEILGHFPKFEWLFTVSCFS*SSTSGS Trigger: TGACCCTGAAGTTGAAGAGCAGGAGAAGCAGCTGAC...TGTGAATAGCCATTCGAACTTGGGAAAGTGACCTAATATTTCTGAGCCTGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR CCA 90 bp | GGAAACTATCATTTATTCAAGACCCAGAATTGCATACACCATGCTAAGTGTTTTGTCTTCGTCTCGGTCTaGGGACAGCACCAGAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GNYHLFKTQNCIHHAKCFVFVSV*GQHQRD Trigger: ATCCCTCTGGTGCTGTCCCCAGACCGAGACGAAGAC...AAAACACTTAGCATGGTGTATGCAATTCTGGGTCTTGAATAAATGATAGTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000106384.10 |
||
| CDS-3UTR CCA 90 bp | TTATCACCATCTACAAATGAGAACACAGGCTCAGAAATATTAGGTCACTTTCCCGGCTTGGTTCTCAAGTaGTCAGGAACGACCTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: LSPSTNENTGSEILGHFPGLVLK*SGTTSW Trigger: CCATGAGGTCGTTCCTGACCACTTGAGAACCAAGCC...GGGAAAGTGACCTAATATTTCTGAGCCTGTGTTCTCATTTGTAGATGGTGATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR CCA 90 bp | GAGAACACAGGCTCAGAAATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCCATCAGCACCAATTCTaGCAGCATCTGTTGTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ENTGSEILGHFPKFEWLFHQHQF*QHLLSA Trigger: AGCTGACAACAGATGCTGCCAGAATTGGTGCTGATG...GAATAGCCATTCGAACTTGGGAAAGTGACCTAATATTTCTGAGCCTGTGTTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR CCA 90 bp | TTATCACCATCTACAAATGAGAACACAGGCTCAGAAATATTAGGTCACTTTCCCAACTCCACTGAGCATTaGCTGCTGCTGGTTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSPSTNENTGSEILGHFPNSTEH*LLLVWS Trigger: GCTCCAAACCAGCAGCAGCCAATGCTCAGTGGAGTT...GGGAAAGTGACCTAATATTTCTGAGCCTGTGTTCTCATTTGTAGATGGTGATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000084319.11 |
||
| CDS-3UTR TCA 90 bp | GGAAACTATCATTTATTCAAGACCCAGAATTGCATACACCATGCTAAGTGTTTTCCATCTGAACTCCACTaGGCATTGGCTGCTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GNYHLFKTQNCIHHAKCFPSELH*ALAAAG Trigger: ACCAGCAGCAGCCAATGCTCAGTGGAGTTCAGATGG...AAAACACTTAGCATGGTGTATGCAATTCTGGGTCTTGAATAAATGATAGTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000084319.11 |
||
| CDS-3UTR CCA 90 bp | TTATCACCATCTACAAATGAGAACACAGGCTCAGAAATATTAGGTCACTTTCCCTCAGGAACGACCTCATaGCTGAAAACAGGCACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LSPSTNENTGSEILGHFPSGTTS*LKTGTR Trigger: ACGAGTGCCTGTTTTCAGCCATGAGGTCGTTCCTGA...GGGAAAGTGACCTAATATTTCTGAGCCTGTGTTCTCATTTGTAGATGGTGATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR CCA 90 bp | TTATCACCATCTACAAATGAGAACACAGGCTCAGAAATATTAGGTCACTTTCCCCTTCAGGGTCAGGCTTaGTTCTCAAGTGGTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSPSTNENTGSEILGHFPLQGQA*FSSGQE Trigger: TTCCTGACCACTTGAGAACCAAGCCTGACCCTGAAG...GGGAAAGTGACCTAATATTTCTGAGCCTGTGTTCTCATTTGTAGATGGTGATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR CCA 90 bp | AACACAGGCTCAGAAATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCACACATCAGCACCAATTCTaGCAGCATCTGTTGTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NTGSEILGHFPKFEWLFTHQHQF*QHLLSA Trigger: AGCTGACAACAGATGCTGCCAGAATTGGTGCTGATG...TGTGAATAGCCATTCGAACTTGGGAAAGTGACCTAATATTTCTGAGCCTGTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR GCA 90 bp | TTATCACCATCTACAAATGAGAACACAGGCTCAGAAATATTAGGTCACTTTCCCCTGTCCAGAAAGCAATaGAAAGCTGTCCAGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSPSTNENTGSEILGHFPLSRKQ*KAVQDR Trigger: TCTGTCCTGGACAGCTTTGCATTGCTTTCTGGACAG...GGGAAAGTGACCTAATATTTCTGAGCCTGTGTTCTCATTTGTAGATGGTGATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000106384.10 |
||
| CDS-3UTR GCA 90 bp | AGGCTCAGAAATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCACAGTGGAAGTGGCGTCTTCTCATaGTTTAAGACCTTGTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RLRNIRSLSQVRMAIHSGSGVFS*FKTLFR Trigger: TCTGAACAAGGTCTTAAAGCATGAGAAGACGCCACT...TCCACTGTGAATAGCCATTCGAACTTGGGAAAGTGACCTAATATTTCTGAGCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000106384.10 |
||
| CDS-3UTR CCA 90 bp | GGAAACTATCATTTATTCAAGACCCAGAATTGCATACACCATGCTAAGTGTTTTGGCTTGGTTCTCAAGTaGTCAGGAACGACCTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: GNYHLFKTQNCIHHAKCFGLVLK*SGTTSW Trigger: CCATGAGGTCGTTCCTGACCACTTGAGAACCAAGCC...AAAACACTTAGCATGGTGTATGCAATTCTGGGTCTTGAATAAATGATAGTTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR CCA 90 bp | TTATCACCATCTACAAATGAGAACACAGGCTCAGAAATATTAGGTCACTTTCCCCATCAGCACCAATTCTaGCAGCATCTGTTGTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSPSTNENTGSEILGHFPHQHQF*QHLLSA Trigger: AGCTGACAACAGATGCTGCCAGAATTGGTGCTGATG...GGGAAAGTGACCTAATATTTCTGAGCCTGTGTTCTCATTTGTAGATGGTGATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR CCA 90 bp | AATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCACAGTGGAGCTGAGATCGGTTTTTATTCCACTTaGCATTTTCCCTGGTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: NIRSLSQVRMAIHSGAEIGFYST*HFPWLT Trigger: GGTCAACCAGGGAAAATGCCAAGTGGAATAAAAACC...GATCTCAGCTCCACTGTGAATAGCCATTCGAACTTGGGAAAGTGACCTAATATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000084319.11 |
||
| CDS-3UTR TCA 90 bp | AGGCTCAGAAATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCACAGTGGAGCATTGAAGCTGACTTaGTGTTGGTTTTTATTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RLRNIRSLSQVRMAIHSGALKLT*CWFLFH Trigger: GTGGAATAAAAACCAACATCAAGTCAGCTTCAATGC...TCCACTGTGAATAGCCATTCGAACTTGGGAAAGTGACCTAATATTTCTGAGCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR CCA 90 bp | GGAAACTATCATTTATTCAAGACCCAGAATTGCATACACCATGCTAAGTGTTTTTCAGGAACGACCTCATaGCTGAAAACAGGCACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: GNYHLFKTQNCIHHAKCFSGTTS*LKTGTR Trigger: ACGAGTGCCTGTTTTCAGCCATGAGGTCGTTCCTGA...AAAACACTTAGCATGGTGTATGCAATTCTGGGTCTTGAATAAATGATAGTTTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR CCA 90 bp | ATTCACAGTGGAGCTGAGATCTGTCTCTTGCTGAAAGCCTGTGTTCTTTTTATTGGTTTTTATTCCACTTaGCATTTTCCCTGGTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: IHSGAEICLLLKACVLFIGFYST*HFPWLT Trigger: GGTCAACCAGGGAAAATGCCAAGTGGAATAAAAACC...AATAAAAAGAACACAGGCTTTCAGCAAGAGACAGATCTCAGCTCCACTGTGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000084319.11 |
||
| CDS-3UTR TCA 90 bp | GGAAACTATCATTTATTCAAGACCCAGAATTGCATACACCATGCTAAGTGTTTTAATGAAACTCCCCAGTaGATTCTTCAGATCGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GNYHLFKTQNCIHHAKCFNETPQ*ILQIGH Trigger: GTGGCCGATCTGAAGAATTCACTGGGGAGTTTCATT...AAAACACTTAGCATGGTGTATGCAATTCTGGGTCTTGAATAAATGATAGTTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000106384.10 |
||
| CDS-3UTR TCA 90 bp | TGGCTCACTGGTGTCATGGAGATGAACCAAATCACAATAAGTTCTGCATATAGGTTTCCAACTTGTAAATaGAACTCCCCAGTGAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: WLTGVMEMNQITISSAYRFPTCK*NSPVNS Trigger: AGAATTCACTGGGGAGTTTCATTTACAAGTTGGAAA...CCTATATGCAGAACTTATTGTGATTTGGTTCATCTCCATGACACCAGTGAGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
||
| CDS-3UTR TCA 90 bp | TTATCACCATCTACAAATGAGAACACAGGCTCAGAAATATTAGGTCACTTTCCCTTTCCAACTTGTAAATaGAACTCCCCAGTGAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSPSTNENTGSEILGHFPFPTCK*NSPVNS Trigger: AGAATTCACTGGGGAGTTTCATTTACAAGTTGGAAA...GGGAAAGTGACCTAATATTTCTGAGCCTGTGTTCTCATTTGTAGATGGTGATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000106384.10 |
||
| CDS-3UTR TCA 90 bp | GGAAACTATCATTTATTCAAGACCCAGAATTGCATACACCATGCTAAGTGTTTTGCATTGAAGCTGACTTaGTGTTGGTTTTTATTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GNYHLFKTQNCIHHAKCFALKLT*CWFLFH Trigger: GTGGAATAAAAACCAACATCAAGTCAGCTTCAATGC...AAAACACTTAGCATGGTGTATGCAATTCTGGGTCTTGAATAAATGATAGTTTCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS CCA 90 bp | AGGCACTCGTCCTTCAGTTTGACGCATGAGGTCTTCGTCTCGGTCTaGGGACAGCACCAGAGGGATGATGACCTGGTTTCGGAACAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RHSSFSLTHEVFVSV*GQHQRDDDLVSEQW Trigger: CCACTGTTCCGAAACCAGGTCATCATCCCTCTGGTGCTGTCCCCAGACCGAGACGAAGACCTCATGCGTCAAACTGAAGGACGAGTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000106384.10 |
||
| CDS TCA 90 bp | TTGGCATTTTCCCTGGTTGACCTGCCTGAGCCATCTGAACTCCACTaGGCATTGGCTGCTGCTGGTTTGGAGCACCTGGCATCTGAACCT | + |
|
Preference number: 5 (lower is better) Translates to: LAFSLVDLPEPSELH*ALAAAGLEHLASEP Trigger: AGGTTCAGATGCCAGGTGCTCCAAACCAGCAGCAGCCAATGCTCAGTGGAGTTCAGATGGCTCAGGCAGGTCAACCAGGGAAAATGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000084319.11 |
||
| CDS CCA 90 bp | AGGTCTTCGTCTCGGTCTGGGGACAGCACCAGAGGGATGATGACCTaGTTTCGGAACAGTGGCGTCTTCTCATGCTTTAAGACCTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RSSSRSGDSTRGMMT*FRNSGVFSCFKTLF Trigger: GAACAAGGTCTTAAAGCATGAGAAGACGCCACTGTTCCGAAACCAGGTCATCATCCCTCTGGTGCTGTCCCCAGACCGAGACGAAGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000106384.10 |
||
| CDS-3UTR CAA 90 bp | ATGCTGAGCTGGTCTCATCACACCTGGAAGTGGCCAGTGTCCTCCAGAAACCTCTTGGTGTCTCCAGGGTaGAAAGTCTGCTTGTTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: MLSWSHHTWKWPVSSRNLLVSPG*KVCLFG Trigger: GCCAAACAAGCAGACTTTCAACCCTGGAGACACCAA...GAGGTTTCTGGAGGACACTGGCCACTTCCAGGTGTGATGAGACCAGCTCAGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
||
| CDS GCA 90 bp | GCATCAGCACCAATTCTGGCAGCATCTGTTGTCAGCTGCTTCTCCTaGTCTTCAACTTCAGGGTCAGGCTTGGTTCTCAAGTGGTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ASAPILAASVVSCFS*SSTSGSGLVLKWSG Trigger: TCCTGACCACTTGAGAACCAAGCCTGACCCTGAAGTTGAAGAGCAGGAGAAGCAGCTGACAACAGATGCTGCCAGAATTGGTGCTGATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 ENSMUST00000144577.2 |
||
| CDS TCA 90 bp | CAGAGGGCCAGGTCAGCCGGTCATACTCGTTTTCCAACTTGTAAATaGAACTCCCCAGTGAATTCTTCAGATCGGCCACTTGATTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: QRARSAGHTRFPTCK*NSPVNSSDRPLDSA Trigger: TGCTGAATCAAGTGGCCGATCTGAAGAATTCACTGGGGAGTTTCATTTACAAGTTGGAAAACGAGTATGACCGGCTGACCTGGCCCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019229.15 |
||
| CDS-3UTR CAA 90 bp | TCCCAAGTTCGAATGGCTATTCACAGTGGAGCTGAGATCTGTCTCTTGCTGAAAACTTCAGGGTCAGGCTaGGTTCTCAAGTGGTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SQVRMAIHSGAEICLLLKTSGSG*VLKWSG Trigger: TCCTGACCACTTGAGAACCAAGCCTGACCCTGAAGT...TTTCAGCAAGAGACAGATCTCAGCTCCACTGTGAATAGCCATTCGAACTTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR CAA 90 bp | AATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCACAGTGGAGCTGAGATCGGGTTGAAAGTCTGCTaGTTTGGCCGGAGACCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: NIRSLSQVRMAIHSGAEIGLKVC*FGRRPP Trigger: CGGAGGTCTCCGGCCAAACAAGCAGACTTTCAACCC...GATCTCAGCTCCACTGTGAATAGCCATTCGAACTTGGGAAAGTGACCTAATATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR CAA 90 bp | AACACAGGCTCAGAAATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCACAGGGTTGAAAGTCTGCTaGTTTGGCCGGAGACCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: NTGSEILGHFPKFEWLFTGLKVC*FGRRPP Trigger: CGGAGGTCTCCGGCCAAACAAGCAGACTTTCAACCC...TGTGAATAGCCATTCGAACTTGGGAAAGTGACCTAATATTTCTGAGCCTGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR CAA 90 bp | ATTCACAGTGGAGCTGAGATCTGTCTCTTGCTGAAAGCCTGTGTTCTTTTTATTGGGTTGAAAGTCTGCTaGTTTGGCCGGAGACCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: IHSGAEICLLLKACVLFIGLKVC*FGRRPP Trigger: CGGAGGTCTCCGGCCAAACAAGCAGACTTTCAACCC...AATAAAAAGAACACAGGCTTTCAGCAAGAGACAGATCTCAGCTCCACTGTGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR CAA 90 bp | TCCCAAGTTCGAATGGCTATTCACAGTGGAGCTGAGATCTGTCTCTTGCTGAAATTGGTGTCTCCAGGGTaGAAAGTCTGCTTGTTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SQVRMAIHSGAEICLLLKLVSPG*KVCLFG Trigger: GCCAAACAAGCAGACTTTCAACCCTGGAGACACCAA...TTTCAGCAAGAGACAGATCTCAGCTCCACTGTGAATAGCCATTCGAACTTGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR CAA 90 bp | GCTGAGAAAGGCAACAGGCCTGGCTGTCCAAAACTCCACTGTTCGTCAACTCTAGAAGCTGACTTGATGTaGGTTTTTATTCCACTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: AEKGNRPGCPKLHCSSTLEADLM*VFIPLG Trigger: GCCAAGTGGAATAAAAACCAACATCAAGTCAGCTTC...TAGAGTTGACGAACAGTGGAGTTTTGGACAGCCAGGCCTGTTGCCTTTCTCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
||
| CDS GCA 90 bp | ACCAGAGGGATGATGACCTGGTTTCGGAACAGTGGCGTCTTCTCATaGTTTAAGACCTTGTTCAGAGTGTTCAACTGTCCAGAAAGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: TRGMMTWFRNSGVFS*FKTLFRVFNCPESN Trigger: ATTGCTTTCTGGACAGTTGAACACTCTGAACAAGGTCTTAAAGCATGAGAAGACGCCACTGTTCCGAAACCAGGTCATCATCCCTCTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000106384.10 |
||
| CDS-3UTR CAA 90 bp | AATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCACAGTGGAGCTGAGATCACTTCAGGGTCAGGCTaGGTTCTCAAGTGGTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: NIRSLSQVRMAIHSGAEITSGSG*VLKWSG Trigger: TCCTGACCACTTGAGAACCAAGCCTGACCCTGAAGT...GATCTCAGCTCCACTGTGAATAGCCATTCGAACTTGGGAAAGTGACCTAATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR CAA 90 bp | TGCCCAGAAAAGAACGCTGAGAAAGGCAACAGGCCTGGCTGTCCAAAACTCCACGATTCTCGTTCTTCTTaGCTGATTTTCTCTAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: CPEKNAEKGNRPGCPKLHDSRSS*LIFSKR Trigger: CCTTTTAGAGAAAATCAGCAAAGAAGAACGAGAATC...GTGGAGTTTTGGACAGCCAGGCCTGTTGCCTTTCTCAGCGTTCTTTTCTGGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
||
| CDS-3UTR CAA 90 bp | TTATCACCATCTACAAATGAGAACACAGGCTCAGAAATATTAGGTCACTTTCCCGGGTTGAAAGTCTGCTaGTTTGGCCGGAGACCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: LSPSTNENTGSEILGHFPGLKVC*FGRRPP Trigger: CGGAGGTCTCCGGCCAAACAAGCAGACTTTCAACCC...GGGAAAGTGACCTAATATTTCTGAGCCTGTGTTCTCATTTGTAGATGGTGATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR CAA 90 bp | GAGAACACAGGCTCAGAAATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCAGGCAAGAACCAGATTaGCAGGTCAGCCGGTCATAC | + |
|
Preference number: 5 (lower is better) Translates to: ENTGSEILGHFPKFEWLFRQEPD*QVSRSY Trigger: GTATGACCGGCTGACCTGCAAATCTGGTTCTTGCCT...GAATAGCCATTCGAACTTGGGAAAGTGACCTAATATTTCTGAGCCTGTGTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
||
| CDS TCA 90 bp | CAGATTTGCAGGTCAGCCGGTCATACTCGTTTTCCAACTTGTAAATaGAACTCCCCAGTGAATTCTTCAGATCGGCCACTTGATTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: QICRSAGHTRFPTCK*NSPVNSSDRPLDSA Trigger: TGCTGAATCAAGTGGCCGATCTGAAGAATTCACTGGGGAGTTTCATTTACAAGTTGGAAAACGAGTATGACCGGCTGACCTGCAAATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
||
| CDS-3UTR CAA 90 bp | AACACAGGCTCAGAAATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCACAACTTCAGGGTCAGGCTaGGTTCTCAAGTGGTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: NTGSEILGHFPKFEWLFTTSGSG*VLKWSG Trigger: TCCTGACCACTTGAGAACCAAGCCTGACCCTGAAGT...TGTGAATAGCCATTCGAACTTGGGAAAGTGACCTAATATTTCTGAGCCTGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR CAA 90 bp | AAAAATCATGTCATTGCTCAACTCAGCACAGATCACCTGAGAGTGGAGGCTGCCGAAGCTGACTTGATGTaGGTTTTTATTCCACTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: KNHVIAQLSTDHLRVEAAEADLM*VFIPLG Trigger: GCCAAGTGGAATAAAAACCAACATCAAGTCAGCTTC...GGCAGCCTCCACTCTCAGGTGATCTGTGCTGAGTTGAGCAATGACATGATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
||
| CDS-3UTR CAA 90 bp | TTATCACCATCTACAAATGAGAACACAGGCTCAGAAATATTAGGTCACTTTCCCTTGGTGTCTCCAGGGTaGAAAGTCTGCTTGTTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LSPSTNENTGSEILGHFPLVSPG*KVCLFG Trigger: GCCAAACAAGCAGACTTTCAACCCTGGAGACACCAA...GGGAAAGTGACCTAATATTTCTGAGCCTGTGTTCTCATTTGTAGATGGTGATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
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| CDS-3UTR CAA 90 bp | TCCCAAGTTCGAATGGCTATTCACAGTGGAGCTGAGATCTGTCTCTTGCTGAAAGATTCTCGTTCTTCTTaGCTGATTTTCTCTAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SQVRMAIHSGAEICLLLKDSRSS*LIFSKR Trigger: CCTTTTAGAGAAAATCAGCAAAGAAGAACGAGAATC...TTTCAGCAAGAGACAGATCTCAGCTCCACTGTGAATAGCCATTCGAACTTGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
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| CDS-3UTR CAA 90 bp | AGGCTCAGAAATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCACAGTGGATGGTTTTTATTCCACTaGGCATTTTCCCTGGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: RLRNIRSLSQVRMAIHSGWFLFH*AFSLVD Trigger: GTCAACCAGGGAAAATGCCAAGTGGAATAAAAACCA...TCCACTGTGAATAGCCATTCGAACTTGGGAAAGTGACCTAATATTTCTGAGCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000084319.11 |
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| CDS-3UTR CAA 90 bp | AGGCTCAGAAATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCACAGTGGAGAAGCTGACTTGATGTaGGTTTTTATTCCACTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RLRNIRSLSQVRMAIHSGEADLM*VFIPLG Trigger: GCCAAGTGGAATAAAAACCAACATCAAGTCAGCTTC...TCCACTGTGAATAGCCATTCGAACTTGGGAAAGTGACCTAATATTTCTGAGCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
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| CDS-3UTR CAA 90 bp | GAGAACACAGGCTCAGAAATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCTCATGCTTTAAGACCTaGTTCAGAGTGTTCAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: ENTGSEILGHFPKFEWLFSCFKT*FRVFNC Trigger: ACAGTTGAACACTCTGAACAAGGTCTTAAAGCATGA...GAATAGCCATTCGAACTTGGGAAAGTGACCTAATATTTCTGAGCCTGTGTTCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000106384.10 |
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| CDS-3UTR CAA 90 bp | AACACAGGCTCAGAAATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCACATGGTTTTTATTCCACTaGGCATTTTCCCTGGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: NTGSEILGHFPKFEWLFTWFLFH*AFSLVD Trigger: GTCAACCAGGGAAAATGCCAAGTGGAATAAAAACCA...TGTGAATAGCCATTCGAACTTGGGAAAGTGACCTAATATTTCTGAGCCTGTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000084319.11 |
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| CDS-3UTR CAA 90 bp | AACACAGGCTCAGAAATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCACATCATGCTTTAAGACCTaGTTCAGAGTGTTCAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: NTGSEILGHFPKFEWLFTSCFKT*FRVFNC Trigger: ACAGTTGAACACTCTGAACAAGGTCTTAAAGCATGA...TGTGAATAGCCATTCGAACTTGGGAAAGTGACCTAATATTTCTGAGCCTGTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000106384.10 |
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| CDS-3UTR CAA 90 bp | GAGAACACAGGCTCAGAAATATTAGGTCACTTTCCCAAGTTCGAATGGCTATTCGATTCTCGTTCTTCTTaGCTGATTTTCTCTAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: ENTGSEILGHFPKFEWLFDSRSS*LIFSKR Trigger: CCTTTTAGAGAAAATCAGCAAAGAAGAACGAGAATC...GAATAGCCATTCGAACTTGGGAAAGTGACCTAATATTTCTGAGCCTGTGTTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
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| CDS-3UTR CAA 90 bp | TTATCACCATCTACAAATGAGAACACAGGCTCAGAAATATTAGGTCACTTTCCCGATTCTCGTTCTTCTTaGCTGATTTTCTCTAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSPSTNENTGSEILGHFPDSRSS*LIFSKR Trigger: CCTTTTAGAGAAAATCAGCAAAGAAGAACGAGAATC...GGGAAAGTGACCTAATATTTCTGAGCCTGTGTTCTCATTTGTAGATGGTGATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
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| CDS-3UTR CAA 90 bp | GGAAACTATCATTTATTCAAGACCCAGAATTGCATACACCATGCTAAGTGTTTTGAAGCTGACTTGATGTaGGTTTTTATTCCACTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GNYHLFKTQNCIHHAKCFEADLM*VFIPLG Trigger: GCCAAGTGGAATAAAAACCAACATCAAGTCAGCTTC...AAAACACTTAGCATGGTGTATGCAATTCTGGGTCTTGAATAAATGATAGTTTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
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| CDS CAA 90 bp | CACCTGGCATCTGAACCTGCGGTAATCCTGAGGCCCCTGCAAGGATaGTACCAGCTCCTGGCTGACCGGGTTGCCCAGGACCACTGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: HLASEPAVILRPLQG*YQLLADRVAQDHCY Trigger: GTAGCAGTGGTCCTGGGCAACCCGGTCAGCCAGGAGCTGGTACAATCCTTGCAGGGGCCTCAGGATTACCGCAGGTTCAGATGCCAGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000084319.11 |
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| CDS TCA 72 bp | AGCATTGGCTGCTGCTGGTTTGGAGCACCTGGCATCTaGACCTGCGGTAATCCTGAGGCCCCTGCAAGGATT | + |
|
Preference number: 6 (lower is better) Translates to: SIGCCWFGAPGI*TCGNPEAPARI Trigger: AATCCTTGCAGGGGCCTCAGGATTACCGCAGGTTCAGATGCCAGGTGCTCCAAACCAGCAGCAGCCAATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000084319.11 |
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| CDS CAA 72 bp | GCAACGGCTGCTACTAAGGCATTGGTGTCTCCAGGGTaGAAAGTCTGCTTGTTTGGCCGGAGACCTCCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: ATAATKALVSPG*KVCLFGRRPPL Trigger: GAGCGGAGGTCTCCGGCCAAACAAGCAGACTTTCAACCCTGGAGACACCAATGCCTTAGTAGCAGCCGTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
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| CDS CCA 72 bp | TCCTTCAGTTTGACGCATGAGGTCTTCGTCTCGGTCTaGGGACAGCACCAGAGGGATGATGACCTGGTTTCG | + |
|
Preference number: 6 (lower is better) Translates to: SFSLTHEVFVSV*GQHQRDDDLVS Trigger: CGAAACCAGGTCATCATCCCTCTGGTGCTGTCCCCAGACCGAGACGAAGACCTCATGCGTCAAACTGAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000106384.10 |
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| CDS CCA 72 bp | TTGACCTGCCTGAGCCATCTGAACTCCACTGAGCATTaGCTGCTGCTGGTTTGGAGCACCTGGCATCTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LTCLSHLNSTEH*LLLVWSTWHLN Trigger: GTTCAGATGCCAGGTGCTCCAAACCAGCAGCAGCCAATGCTCAGTGGAGTTCAGATGGCTCAGGCAGGTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000084319.11 |
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| CDS GCA 72 bp | GACCTTGTTCAGAGTGTTCAACTGTCCAGAAAGCAATaGAAAGCTGTCCAGGACAGAGGGCCAGGTCAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: DLVQSVQLSRKQ*KAVQDRGPGQP Trigger: CGGCTGACCTGGCCCTCTGTCCTGGACAGCTTTGCATTGCTTTCTGGACAGTTGAACACTCTGAACAAGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019229.15 |
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| CDS CCA 72 bp | TCTCGGTCTGGGGACAGCACCAGAGGGATGATGACCTaGTTTCGGAACAGTGGCGTCTTCTCATGCTTTAAG | + |
|
Preference number: 6 (lower is better) Translates to: SRSGDSTRGMMT*FRNSGVFSCFK Trigger: CTTAAAGCATGAGAAGACGCCACTGTTCCGAAACCAGGTCATCATCCCTCTGGTGCTGTCCCCAGACCGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000106384.10 |
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| CDS CAA 72 bp | AGCTGCTTCTCCTGCTCTTCAACTTCAGGGTCAGGCTaGGTTCTCAAGTGGTCAGGAACGACCTCATGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SCFSCSSTSGSG*VLKWSGTTSWL Trigger: CAGCCATGAGGTCGTTCCTGACCACTTGAGAACCAAGCCTGACCCTGAAGTTGAAGAGCAGGAGAAGCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 ENSMUST00000144577.2 |
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| CDS CAA 72 bp | AGCCCCTTCCCAAAGGCAACGGCTGCTACTAAGGCATaGGTGTCTCCAGGGTTGAAAGTCTGCTTGTTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SPFPKATAATKA*VSPGLKVCLFG Trigger: GCCAAACAAGCAGACTTTCAACCCTGGAGACACCAATGCCTTAGTAGCAGCCGTTGCCTTTGGGAAGGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
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| CDS CAA 90 bp | TTCCCAAAGGCAACGGCTGCTACTAAGGCATTGGTGTCTCCAGGGTaGAAAGTCTGCTTGTTTGGCCGGAGACCTCCGCTCTCTGATTCT | + |
|
Preference number: 6 (lower is better) Translates to: FPKATAATKALVSPG*KVCLFGRRPPLSDS Trigger: AGAATCAGAGAGCGGAGGTCTCCGGCCAAACAAGCAGACTTTCAACCCTGGAGACACCAATGCCTTAGTAGCAGCCGTTGCCTTTGGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
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| CDS GCA 72 bp | GCATCAGCACCAATTCTGGCAGCATCTGTTGTCAGCTaGTTCTCCTGCTCTTCAACTTCAGGGTCAGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: ASAPILAASVVS*FSCSSTSGSGL Trigger: CAAGCCTGACCCTGAAGTTGAAGAGCAGGAGAAGCAGCTGACAACAGATGCTGCCAGAATTGGTGCTGATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 ENSMUST00000144577.2 |
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| CDS GCA 72 bp | CGCAGCCCTGTGTCTGGCATAGGCAAGAACCAGATTTaGAGGTCAGCCGGTCATACTCGTTTTCCAACTTGT | + |
|
Preference number: 6 (lower is better) Translates to: RSPVSGIGKNQI*RSAGHTRFPTC Trigger: ACAAGTTGGAAAACGAGTATGACCGGCTGACCTGCAAATCTGGTTCTTGCCTATGCCAGACACAGGGCTGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| CDS GCA 72 bp | GACCTTGTTCAGAGTGTTCAACTGTCCAGAAAGCAATaGAAAGCTGTCCAGGACAGAGGGCCCCGAAGACTC | + |
|
Preference number: 6 (lower is better) Translates to: DLVQSVQLSRKQ*KAVQDRGPRRL Trigger: GAGTCTTCGGGGCCCTCTGTCCTGGACAGCTTTGCATTGCTTTCTGGACAGTTGAACACTCTGAACAAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| CDS CAA 72 bp | ACTAAGGCATTGGTGTCTCCAGGGTTGAAAGTCTGCTaGTTTGGCCGGAGACCTCCGCTCTCTGATTCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: TKALVSPGLKVC*FGRRPPLSDSR Trigger: ACGAGAATCAGAGAGCGGAGGTCTCCGGCCAAACAAGCAGACTTTCAACCCTGGAGACACCAATGCCTTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
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| CDS CAA 72 bp | TCGCAGCCCTGTGTCTGGCATAGGCAAGAACCAGATTaGCAGGTCAGCCGGTCATACTCGTTTTCCAACTTG | + |
|
Preference number: 6 (lower is better) Translates to: SQPCVWHRQEPD*QVSRSYSFSNL Trigger: CAAGTTGGAAAACGAGTATGACCGGCTGACCTGCAAATCTGGTTCTTGCCTATGCCAGACACAGGGCTGCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106384.10 |
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| CDS CAA 90 bp | TCTGTTGTCAGCTGCTTCTCCTGCTCTTCAACTTCAGGGTCAGGCTaGGTTCTCAAGTGGTCAGGAACGACCTCATGGCTGAAAACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SVVSCFSCSSTSGSG*VLKWSGTTSWLKTG Trigger: GCCTGTTTTCAGCCATGAGGTCGTTCCTGACCACTTGAGAACCAAGCCTGACCCTGAAGTTGAAGAGCAGGAGAAGCAGCTGACAACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 ENSMUST00000144577.2 |
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| CDS CAA 90 bp | CAATTAGATAGCCCCTTCCCAAAGGCAACGGCTGCTACTAAGGCATaGGTGTCTCCAGGGTTGAAAGTCTGCTTGTTTGGCCGGAGACCT | + |
|
Preference number: 6 (lower is better) Translates to: QLDSPFPKATAATKA*VSPGLKVCLFGRRP Trigger: AGGTCTCCGGCCAAACAAGCAGACTTTCAACCCTGGAGACACCAATGCCTTAGTAGCAGCCGTTGCCTTTGGGAAGGGGCTATCTAATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 |
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| CDS GCA 72 bp | CCAATTCTGGCAGCATCTGTTGTCAGCTGCTTCTCCTaGTCTTCAACTTCAGGGTCAGGCTTGGTTCTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: PILAASVVSCFS*SSTSGSGLVLK Trigger: CTTGAGAACCAAGCCTGACCCTGAAGTTGAAGAGCAGGAGAAGCAGCTGACAACAGATGCTGCCAGAATTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019229.15 ENSMUST00000073881.8 ENSMUST00000084319.11 ENSMUST00000106384.10 ENSMUST00000144577.2 |
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| CDS TCA 72 bp | ATGAAACTCCCCAGTGAATTCTTCAGATCGGCCACTTaGTTCAGCAGGGCATCTAATGATGCCTCAAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: MKLPSEFFRSAT*FSRASNDASSC Trigger: GCAGCTTGAGGCATCATTAGATGCCCTGCTGAATCAAGTGGCCGATCTGAAGAATTCACTGGGGAGTTTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000106384.10 |
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| CDS TCA 72 bp | AGGTCAGCCGGTCATACTCGTTTTCCAACTTGTAAATaGAACTCCCCAGTGAATTCTTCAGATCGGCCACTT | + |
|
Preference number: 6 (lower is better) Translates to: RSAGHTRFPTCK*NSPVNSSDRPL Trigger: AAGTGGCCGATCTGAAGAATTCACTGGGGAGTTTCATTTACAAGTTGGAAAACGAGTATGACCGGCTGACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000106384.10 |
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| CDS GCA 72 bp | ATGATGACCTGGTTTCGGAACAGTGGCGTCTTCTCATaGTTTAAGACCTTGTTCAGAGTGTTCAACTGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: MMTWFRNSGVFS*FKTLFRVFNCP Trigger: TGGACAGTTGAACACTCTGAACAAGGTCTTAAAGCATGAGAAGACGCCACTGTTCCGAAACCAGGTCATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000106384.10 |
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| CDS CAA 72 bp | CACCGCTGGTACGGATGCATTGAAGCTGACTTGATGTaGGTTTTTATTCCACTTGGCATTTTCCCTGAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: HRWYGCIEADLM*VFIPLGIFPEG Trigger: ACCTTCAGGGAAAATGCCAAGTGGAATAAAAACCAACATCAAGTCAGCTTCAATGCATCCGTACCAGCGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073881.8 ENSMUST00000106384.10 |
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| CDS TCA 72 bp | ATACTCGTTTTCCAACTTGTAAATGAAACTCCCCAGTaGATTCTTCAGATCGGCCACTTGATTCAGCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ILVFQLVNETPQ*ILQIGHLIQQG Trigger: GCCCTGCTGAATCAAGTGGCCGATCTGAAGAATTCACTGGGGAGTTTCATTTACAAGTTGGAAAACGAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000106384.10 |
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| CDS CAA 72 bp | TTTCGGAACAGTGGCGTCTTCTCATGCTTTAAGACCTaGTTCAGAGTGTTCAACTGTCCAGAAAGCAATGCA | + |
|
Preference number: 6 (lower is better) Translates to: FRNSGVFSCFKT*FRVFNCPESNA Trigger: TGCATTGCTTTCTGGACAGTTGAACACTCTGAACAAGGTCTTAAAGCATGAGAAGACGCCACTGTTCCGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019229.15 ENSMUST00000106384.10 |
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