Pregenerated sensors for MED7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020397Ensembl transcript IDs: ENSMUST00000020665.13, ENSMUST00000109231.2, ENSMUST00000109232.4, ENSMUST00000128940.2, ENSMUST00000133635.2, ENSMUST00000140027.8, ENSMUST00000152119.2, ENSMUST00000170928.8
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAGTTGGATTAGAGCAGTGCTTTCATTTACCTATTGTCTATGACTaGTGTCAAGCCATAGATGAGTATTATGAAAGAGAAATTGTATAC | + |
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Preference number: 1 (lower is better) Translates to: RVGLEQCFHLPIVYD*CQAIDEYYEREIVY Trigger: GTATACAATTTCTCTTTCATAATACTCATCTATGGCTTGACAGCAGTCATAGACAATAGGTAAATGAAAGCACTGCTCTAATCCAACTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| 3UTR-3UTR TCA 90 bp | GACTGCTGTCAAGCCATAGATGAGTATTATGAAAGAGAAATTGTATACCTTTCAACAAACCCTGCCTCCTaGGTATGTTTAAAGAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: DCCQAIDEYYEREIVYLSTNPAS*VCLKRS Trigger: ACTTCTCTTTAAACATACTCAGGAGGCAGGGTTTGT...TGAAAGGTATACAATTTCTCTTTCATAATACTCATCTATGGCTTGACAGCAGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| 3UTR-3UTR TCA 90 bp | GACTGCTGTCAAGCCATAGATGAGTATTATGAAAGAGAAATTGTATACCTTTCATTTCACATGTACACTTaGTGCCCTTTATTAGTCTCG | + |
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Preference number: 2 (lower is better) Translates to: DCCQAIDEYYEREIVYLSFHMYT*CPLLVS Trigger: CGAGACTAATAAAGGGCATCAAGTGTACATGTGAAA...TGAAAGGTATACAATTTCTCTTTCATAATACTCATCTATGGCTTGACAGCAGTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| 3UTR-3UTR TCA 90 bp | GACTGCTGTCAAGCCATAGATGAGTATTATGAAAGAGAAATTGTATACCTTTCACTAGAGGATAGAGAATaGAGTTCAGTACTTTGGCTA | + |
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Preference number: 2 (lower is better) Translates to: DCCQAIDEYYEREIVYLSLEDRE*SSVLWL Trigger: TAGCCAAAGTACTGAACTTCATTCTCTATCCTCTAG...TGAAAGGTATACAATTTCTCTTTCATAATACTCATCTATGGCTTGACAGCAGTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| 3UTR-3UTR CCA 90 bp | GACTGCTGTCAAGCCATAGATGAGTATTATGAAAGAGAAATTGTATACCTTTCAAATAGAGTTATCTTTTaGGGGAAGCCTGTATCCATC | + |
|
Preference number: 2 (lower is better) Translates to: DCCQAIDEYYEREIVYLSNRVIF*GKPVSI Trigger: GATGGATACAGGCTTCCCCCAAAAGATAACTCTATT...TGAAAGGTATACAATTTCTCTTTCATAATACTCATCTATGGCTTGACAGCAGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| 3UTR-3UTR GCA 90 bp | GACTGCTGTCAAGCCATAGATGAGTATTATGAAAGAGAAATTGTATACCTTTCATTAACCAACAAACCCTaGCTCCTGAGTATGTTTAAA | + |
|
Preference number: 2 (lower is better) Translates to: DCCQAIDEYYEREIVYLSLTNKP*LLSMFK Trigger: TTTAAACATACTCAGGAGGCAGGGTTTGTTGGTTAA...TGAAAGGTATACAATTTCTCTTTCATAATACTCATCTATGGCTTGACAGCAGTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| 3UTR-3UTR CAA 90 bp | GACTGCTGTCAAGCCATAGATGAGTATTATGAAAGAGAAATTGTATACCTTTCAATCCCACATAGACTCTaGCCCAACCAAACCATAAAT | + |
|
Preference number: 3 (lower is better) Translates to: DCCQAIDEYYEREIVYLSIPHRL*PNQTIN Trigger: ATTTATGGTTTGGTTGGGCAAGAGTCTATGTGGGAT...TGAAAGGTATACAATTTCTCTTTCATAATACTCATCTATGGCTTGACAGCAGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| 3UTR GCA 72 bp | TTAGAGCAGTGCTTTCATTTACCTATTGTCTATGACTaGTGTCAAGCCATAGATGAGTATTATGAAAGAGAA | + |
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Preference number: 3 (lower is better) Translates to: LEQCFHLPIVYD*CQAIDEYYERE Trigger: TTCTCTTTCATAATACTCATCTATGGCTTGACAGCAGTCATAGACAATAGGTAAATGAAAGCACTGCTCTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| 3UTR GCA 72 bp | TCCAATTGTTCATATATGAGAGTTGGATTAGAGCAGTaGTTTCATTTACCTATTGTCTATGACTGCTGTCAA | + |
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Preference number: 3 (lower is better) Translates to: SNCSYMRVGLEQ*FHLPIVYDCCQ Trigger: TTGACAGCAGTCATAGACAATAGGTAAATGAAAGCACTGCTCTAATCCAACTCTCATATATGAACAATTGGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| 3UTR CCA 72 bp | AGGTATTTACTAGGGTGGATTTCAAGATTAGAAAACTaGAGTAGCTCTAGTTATGATTTCCAGTATGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: RYLLGWISRLEN*SSSSYDFQYDR Trigger: TCTGTCATACTGGAAATCATAACTAGAGCTACTCCAGTTTTCTAATCTTGAAATCCACCCTAGTAAATACCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR GCA 90 bp | AGCTACTCAATAGAGTTATCTTTTGGGGGAAGCCTGTATCCATCTGTGAAGGTGTGGAGGCGGTGGAAGTaGACTCACTTGCTGTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SYSIELSFGGSLYPSVKVWRRWK*THLLWF Trigger: GAACCACAGCAAGTGAGTGCACTTCCACCGCCTCCA...CACCTTCACAGATGGATACAGGCTTCCCCCAAAAGATAACTCTATTGAGTAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR CCA 90 bp | AGCTACTCAATAGAGTTATCTTTTGGGGGAAGCCTGTATCCATCTGTGAAGGTGCTGCATTGGAGGCGGTaGAAGTGCACTCACTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SYSIELSFGGSLYPSVKVLHWRR*KCTHLL Trigger: CAGCAAGTGAGTGCACTTCCACCGCCTCCAATGCAG...CACCTTCACAGATGGATACAGGCTTCCCCCAAAAGATAACTCTATTGAGTAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR CCA 90 bp | AGCTACTCAATAGAGTTATCTTTTGGGGGAAGCCTGTATCCATCTGTGAAGGTGGCTGTTTCAAGGCGCTaGCGTTTCTGGACCTCCATC | + |
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Preference number: 4 (lower is better) Translates to: SYSIELSFGGSLYPSVKVAVSRR*RFWTSI Trigger: GATGGAGGTCCAGAAACGCCAGCGCCTTGAAACAGC...CACCTTCACAGATGGATACAGGCTTCCCCCAAAAGATAACTCTATTGAGTAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR TCA 90 bp | AGCTACTCAATAGAGTTATCTTTTGGGGGAAGCCTGTATCCATCTGTGAAGGTGTCTCATCCCTGCTTCTaGATGGGGCAAATCATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SYSIELSFGGSLYPSVKVSHPCF*MGQIIG Trigger: CCCGATGATTTGCCCCATTCAGAAGCAGGGATGAGA...CACCTTCACAGATGGATACAGGCTTCCCCCAAAAGATAACTCTATTGAGTAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR CCA 90 bp | AGCTACTCAATAGAGTTATCTTTTGGGGGAAGCCTGTATCCATCTGTGAAGGTGCTTGATGTACTGCATTaGAGGCGGTGGAAGTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: SYSIELSFGGSLYPSVKVLDVLH*RRWKCT Trigger: AGTGCACTTCCACCGCCTCCAATGCAGTACATCAAG...CACCTTCACAGATGGATACAGGCTTCCCCCAAAAGATAACTCTATTGAGTAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR CCA 90 bp | AGCTACTCAATAGAGTTATCTTTTGGGGGAAGCCTGTATCCATCTGTGAAGGTGGTAGCTGTCTTTAATTaGAGGAGGAGGCTTGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SYSIELSFGGSLYPSVKVVAVFN*RRRLGS Trigger: GCTCCCAAGCCTCCTCCTCCAATTAAAGACAGCTAC...CACCTTCACAGATGGATACAGGCTTCCCCCAAAAGATAACTCTATTGAGTAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR GCA 90 bp | AGCTACTCAATAGAGTTATCTTTTGGGGGAAGCCTGTATCCATCTGTGAAGGTGGATGAAGCCGTTCAATaGCCTGACTTTCTAAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SYSIELSFGGSLYPSVKVDEAVQ*PDFLKG Trigger: GCCCTTTAGAAAGTCAGGGCATTGAACGGCTTCATC...CACCTTCACAGATGGATACAGGCTTCCCCCAAAAGATAACTCTATTGAGTAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR CCA 90 bp | AGCTACTCAATAGAGTTATCTTTTGGGGGAAGCCTGTATCCATCTGTGAAGGTGATCCCTGCTTCTGAATaGGGCAAATCATCGGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SYSIELSFGGSLYPSVKVIPASE*GKSSGK Trigger: TTTGCCCGATGATTTGCCCCATTCAGAAGCAGGGAT...CACCTTCACAGATGGATACAGGCTTCCCCCAAAAGATAACTCTATTGAGTAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR TCA 90 bp | AGCTACTCAATAGAGTTATCTTTTGGGGGAAGCCTGTATCCATCTGTGAAGGTGCGTTCCAGATGTTTCTaGAACCTCTCAGCTGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: SYSIELSFGGSLYPSVKVRSRCF*NLSAVS Trigger: TGAAACAGCTGAGAGGTTTCAGAAACATCTGGAACG...CACCTTCACAGATGGATACAGGCTTCCCCCAAAAGATAACTCTATTGAGTAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR TCA 90 bp | AGCTACTCAATAGAGTTATCTTTTGGGGGAAGCCTGTATCCATCTGTGAAGGTGGTCCCTTCTGTGACCTaGACTTTCTCTTTGTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SYSIELSFGGSLYPSVKVVPSVT*TFSLLF Trigger: GAACAACAAAGAGAAAGTTCAGGTCACAGAAGGGAC...CACCTTCACAGATGGATACAGGCTTCCCCCAAAAGATAACTCTATTGAGTAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR GCA 90 bp | AGCTACTCAATAGAGTTATCTTTTGGGGGAAGCCTGTATCCATCTGTGAAGGTGTATTCCTTGATGTACTaGATTGGAGGCGGTGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SYSIELSFGGSLYPSVKVYSLMY*IGGGGS Trigger: ACTTCCACCGCCTCCAATGCAGTACATCAAGGAATA...CACCTTCACAGATGGATACAGGCTTCCCCCAAAAGATAACTCTATTGAGTAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR GCA 90 bp | AGCTACTCAATAGAGTTATCTTTTGGGGGAAGCCTGTATCCATCTGTGAAGGTGTCTCAAAGTCTCTCTTaGTTGGTGGGGTCGATATTC | + |
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Preference number: 4 (lower is better) Translates to: SYSIELSFGGSLYPSVKVSQSLS*LVGSIF Trigger: GAATATCGACCCCACCAAGCAAGAGAGACTTTGAGA...CACCTTCACAGATGGATACAGGCTTCCCCCAAAAGATAACTCTATTGAGTAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR GCA 90 bp | GACTGCTGTCAAGCCATAGATGAGTATTATGAAAGAGAAATTGTATACCTTTCATGGAGGCGGTGGAAGTaGACTCACTTGCTGTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DCCQAIDEYYEREIVYLSWRRWK*THLLWF Trigger: GAACCACAGCAAGTGAGTGCACTTCCACCGCCTCCA...TGAAAGGTATACAATTTCTCTTTCATAATACTCATCTATGGCTTGACAGCAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR CCA 90 bp | GACTGCTGTCAAGCCATAGATGAGTATTATGAAAGAGAAATTGTATACCTTTCACTGCATTGGAGGCGGTaGAAGTGCACTCACTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: DCCQAIDEYYEREIVYLSLHWRR*KCTHLL Trigger: CAGCAAGTGAGTGCACTTCCACCGCCTCCAATGCAG...TGAAAGGTATACAATTTCTCTTTCATAATACTCATCTATGGCTTGACAGCAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR CCA 90 bp | GACTGCTGTCAAGCCATAGATGAGTATTATGAAAGAGAAATTGTATACCTTTCAAGGCGCTGGCGTTTCTaGACCTCCATCATGACTCTC | + |
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Preference number: 4 (lower is better) Translates to: DCCQAIDEYYEREIVYLSRRWRF*TSIMTL Trigger: GAGAGTCATGATGGAGGTCCAGAAACGCCAGCGCCT...TGAAAGGTATACAATTTCTCTTTCATAATACTCATCTATGGCTTGACAGCAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR CCA 90 bp | GACTGCTGTCAAGCCATAGATGAGTATTATGAAAGAGAAATTGTATACCTTTCAGCTGTTTCAAGGCGCTaGCGTTTCTGGACCTCCATC | + |
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Preference number: 4 (lower is better) Translates to: DCCQAIDEYYEREIVYLSAVSRR*RFWTSI Trigger: GATGGAGGTCCAGAAACGCCAGCGCCTTGAAACAGC...TGAAAGGTATACAATTTCTCTTTCATAATACTCATCTATGGCTTGACAGCAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR TCA 90 bp | AGCTACTCAATAGAGTTATCTTTTGGGGGAAGCCTGTATCCATCTGTGAAGGTGGGAGCCAAGCCTTCCTaGATATTTTCATCTGTATAT | + |
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Preference number: 4 (lower is better) Translates to: SYSIELSFGGSLYPSVKVGAKPS*IFSSVY Trigger: ATATACAGATGAAAATATTCAGGAAGGCTTGGCTCC...CACCTTCACAGATGGATACAGGCTTCCCCCAAAAGATAACTCTATTGAGTAGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR TCA 90 bp | AGCTACTCAATAGAGTTATCTTTTGGGGGAAGCCTGTATCCATCTGTGAAGGTGGAAGCCAAGCAATTCTaGATCATTTCAATGACTCGT | + |
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Preference number: 4 (lower is better) Translates to: SYSIELSFGGSLYPSVKVEAKQF*IISMTR Trigger: ACGAGTCATTGAAATGATTCAGAATTGCTTGGCTTC...CACCTTCACAGATGGATACAGGCTTCCCCCAAAAGATAACTCTATTGAGTAGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR TCA 90 bp | GACTGCTGTCAAGCCATAGATGAGTATTATGAAAGAGAAATTGTATACCTTTCATCTCATCCCTGCTTCTaGATGGGGCAAATCATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: DCCQAIDEYYEREIVYLSSHPCF*MGQIIG Trigger: CCCGATGATTTGCCCCATTCAGAAGCAGGGATGAGA...TGAAAGGTATACAATTTCTCTTTCATAATACTCATCTATGGCTTGACAGCAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR CCA 90 bp | AGCTACTCAATAGAGTTATCTTTTGGGGGAAGCCTGTATCCATCTGTGAAGGTGGTCTCTCTTGCTTGGTaGGGTCGATATTCATTTATA | + |
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Preference number: 4 (lower is better) Translates to: SYSIELSFGGSLYPSVKVVSLAW*GRYSFI Trigger: TATAAATGAATATCGACCCCACCAAGCAAGAGAGAC...CACCTTCACAGATGGATACAGGCTTCCCCCAAAAGATAACTCTATTGAGTAGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR CCA 90 bp | GACTGCTGTCAAGCCATAGATGAGTATTATGAAAGAGAAATTGTATACCTTTCAGTAGCTGTCTTTAATTaGAGGAGGAGGCTTGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: DCCQAIDEYYEREIVYLSVAVFN*RRRLGS Trigger: GCTCCCAAGCCTCCTCCTCCAATTAAAGACAGCTAC...TGAAAGGTATACAATTTCTCTTTCATAATACTCATCTATGGCTTGACAGCAGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR GCA 90 bp | GACTGCTGTCAAGCCATAGATGAGTATTATGAAAGAGAAATTGTATACCTTTCAGATGAAGCCGTTCAATaGCCTGACTTTCTAAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: DCCQAIDEYYEREIVYLSDEAVQ*PDFLKG Trigger: GCCCTTTAGAAAGTCAGGGCATTGAACGGCTTCATC...TGAAAGGTATACAATTTCTCTTTCATAATACTCATCTATGGCTTGACAGCAGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR CCA 90 bp | GACTGCTGTCAAGCCATAGATGAGTATTATGAAAGAGAAATTGTATACCTTTCAATCCCTGCTTCTGAATaGGGCAAATCATCGGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: DCCQAIDEYYEREIVYLSIPASE*GKSSGK Trigger: TTTGCCCGATGATTTGCCCCATTCAGAAGCAGGGAT...TGAAAGGTATACAATTTCTCTTTCATAATACTCATCTATGGCTTGACAGCAGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR TCA 90 bp | GACTGCTGTCAAGCCATAGATGAGTATTATGAAAGAGAAATTGTATACCTTTCACATCTGTATATTCCTTaGTGTACTGCATTGGAGGCG | + |
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Preference number: 4 (lower is better) Translates to: DCCQAIDEYYEREIVYLSHLYIP*CTALEA Trigger: CGCCTCCAATGCAGTACATCAAGGAATATACAGATG...TGAAAGGTATACAATTTCTCTTTCATAATACTCATCTATGGCTTGACAGCAGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR TCA 90 bp | GACTGCTGTCAAGCCATAGATGAGTATTATGAAAGAGAAATTGTATACCTTTCAGTCCCTTCTGTGACCTaGACTTTCTCTTTGTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: DCCQAIDEYYEREIVYLSVPSVT*TFSLLF Trigger: GAACAACAAAGAGAAAGTTCAGGTCACAGAAGGGAC...TGAAAGGTATACAATTTCTCTTTCATAATACTCATCTATGGCTTGACAGCAGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR GCA 90 bp | GACTGCTGTCAAGCCATAGATGAGTATTATGAAAGAGAAATTGTATACCTTTCATATTCCTTGATGTACTaGATTGGAGGCGGTGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: DCCQAIDEYYEREIVYLSYSLMY*IGGGGS Trigger: ACTTCCACCGCCTCCAATGCAGTACATCAAGGAATA...TGAAAGGTATACAATTTCTCTTTCATAATACTCATCTATGGCTTGACAGCAGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR GCA 90 bp | GACTGCTGTCAAGCCATAGATGAGTATTATGAAAGAGAAATTGTATACCTTTCATCTCAAAGTCTCTCTTaGTTGGTGGGGTCGATATTC | + |
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Preference number: 4 (lower is better) Translates to: DCCQAIDEYYEREIVYLSSQSLS*LVGSIF Trigger: GAATATCGACCCCACCAAGCAAGAGAGACTTTGAGA...TGAAAGGTATACAATTTCTCTTTCATAATACTCATCTATGGCTTGACAGCAGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR GCA 90 bp | GACTGCTGTCAAGCCATAGATGAGTATTATGAAAGAGAAATTGTATACCTTTCACACATTGGAACTGGTTaGCAAACATCATGTAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: DCCQAIDEYYEREIVYLSHIGTG*QTSCSC Trigger: ACAGCTACATGATGTTTGGCAACCAGTTCCAATGTG...TGAAAGGTATACAATTTCTCTTTCATAATACTCATCTATGGCTTGACAGCAGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR TCA 90 bp | GACTGCTGTCAAGCCATAGATGAGTATTATGAAAGAGAAATTGTATACCTTTCAGGAGCCAAGCCTTCCTaGATATTTTCATCTGTATAT | + |
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Preference number: 4 (lower is better) Translates to: DCCQAIDEYYEREIVYLSGAKPS*IFSSVY Trigger: ATATACAGATGAAAATATTCAGGAAGGCTTGGCTCC...TGAAAGGTATACAATTTCTCTTTCATAATACTCATCTATGGCTTGACAGCAGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR CCA 90 bp | GACTGCTGTCAAGCCATAGATGAGTATTATGAAAGAGAAATTGTATACCTTTCAGTCTCTCTTGCTTGGTaGGGTCGATATTCATTTATA | + |
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Preference number: 4 (lower is better) Translates to: DCCQAIDEYYEREIVYLSVSLAW*GRYSFI Trigger: TATAAATGAATATCGACCCCACCAAGCAAGAGAGAC...TGAAAGGTATACAATTTCTCTTTCATAATACTCATCTATGGCTTGACAGCAGTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR CCA 90 bp | GACTGCTGTCAAGCCATAGATGAGTATTATGAAAGAGAAATTGTATACCTTTCAAAAGTCTCTCTTGCTTaGTGGGGTCGATATTCATTT | + |
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Preference number: 4 (lower is better) Translates to: DCCQAIDEYYEREIVYLSKVSLA*WGRYSF Trigger: AAATGAATATCGACCCCACCAAGCAAGAGAGACTTT...TGAAAGGTATACAATTTCTCTTTCATAATACTCATCTATGGCTTGACAGCAGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR CCA 90 bp | GACTGCTGTCAAGCCATAGATGAGTATTATGAAAGAGAAATTGTATACCTTTCAATAAGATCATCACATTaGAACTGGTTGCCAAACATC | + |
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Preference number: 4 (lower is better) Translates to: DCCQAIDEYYEREIVYLSIRSSH*NWLPNI Trigger: GATGTTTGGCAACCAGTTCCAATGTGATGATCTTAT...TGAAAGGTATACAATTTCTCTTTCATAATACTCATCTATGGCTTGACAGCAGTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS GCA 90 bp | GCGCTGGCGTTTCTGGACCTCCATCATGACTCTCAAAGTCTCTCTTaGTTGGTGGGGTCGATATTCATTTATAAGATGATGTACATGTAC | + |
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Preference number: 5 (lower is better) Translates to: ALAFLDLHHDSQSLS*LVGSIFIYKMMYMY Trigger: GTACATGTACATCATCTTATAAATGAATATCGACCCCACCAAGCAAGAGAGACTTTGAGAGTCATGATGGAGGTCCAGAAACGCCAGCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020665.13 ENSMUST00000109231.2 ENSMUST00000109232.4 ENSMUST00000128940.2 ENSMUST00000170928.8 |
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| CDS-3UTR CAA 90 bp | AGCTACTCAATAGAGTTATCTTTTGGGGGAAGCCTGTATCCATCTGTGAAGGTGCAAAGTCTCTCTTGCTaGGTGGGGTCGATATTCATT | + |
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Preference number: 5 (lower is better) Translates to: SYSIELSFGGSLYPSVKVQSLSC*VGSIFI Trigger: AATGAATATCGACCCCACCAAGCAAGAGAGACTTTG...CACCTTCACAGATGGATACAGGCTTCCCCCAAAAGATAACTCTATTGAGTAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS TCA 90 bp | GCAAATCATCGGGCAAAGAAGCCAAGCAATTCTGAATCATTTCAATaGCTCGTTCCAGATGTTTCTGAAACCTCTCAGCTGTTTCAAGGC | + |
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Preference number: 5 (lower is better) Translates to: ANHRAKKPSNSESFQ*LVPDVSETSQLFQG Trigger: GCCTTGAAACAGCTGAGAGGTTTCAGAAACATCTGGAACGAGTCATTGAAATGATTCAGAATTGCTTGGCTTCTTTGCCCGATGATTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020665.13 ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR CAA 90 bp | AGCTACTCAATAGAGTTATCTTTTGGGGGAAGCCTGTATCCATCTGTGAAGGTGTTCTGTCCAGGACAATaGCTGTTATCATCAGTATCC | + |
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Preference number: 5 (lower is better) Translates to: SYSIELSFGGSLYPSVKVFCPGQ*LLSSVS Trigger: GGATACTGATGATAACAGCAATTGTCCTGGACAGAA...CACCTTCACAGATGGATACAGGCTTCCCCCAAAAGATAACTCTATTGAGTAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR CAA 90 bp | AGCTACTCAATAGAGTTATCTTTTGGGGGAAGCCTGTATCCATCTGTGAAGGTGTTTCTTATGATCAAATaGCATAGGATGAAGCCGTTC | + |
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Preference number: 5 (lower is better) Translates to: SYSIELSFGGSLYPSVKVFLMIK*HRMKPF Trigger: GAACGGCTTCATCCTATGCAATTTGATCATAAGAAA...CACCTTCACAGATGGATACAGGCTTCCCCCAAAAGATAACTCTATTGAGTAGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR CAA 90 bp | GACTGCTGTCAAGCCATAGATGAGTATTATGAAAGAGAAATTGTATACCTTTCACTCTCAAAGTCTCTCTaGCTTGGTGGGGTCGATATT | + |
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Preference number: 5 (lower is better) Translates to: DCCQAIDEYYEREIVYLSLSKSL*LGGVDI Trigger: AATATCGACCCCACCAAGCAAGAGAGACTTTGAGAG...TGAAAGGTATACAATTTCTCTTTCATAATACTCATCTATGGCTTGACAGCAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR CAA 90 bp | GACTGCTGTCAAGCCATAGATGAGTATTATGAAAGAGAAATTGTATACCTTTCACAAAGTCTCTCTTGCTaGGTGGGGTCGATATTCATT | + |
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Preference number: 5 (lower is better) Translates to: DCCQAIDEYYEREIVYLSQSLSC*VGSIFI Trigger: AATGAATATCGACCCCACCAAGCAAGAGAGACTTTG...TGAAAGGTATACAATTTCTCTTTCATAATACTCATCTATGGCTTGACAGCAGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR CAA 90 bp | GACTGCTGTCAAGCCATAGATGAGTATTATGAAAGAGAAATTGTATACCTTTCATCATCTGTATATTCCTaGATGTACTGCATTGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: DCCQAIDEYYEREIVYLSSSVYS*MYCIGG Trigger: GCCTCCAATGCAGTACATCAAGGAATATACAGATGA...TGAAAGGTATACAATTTCTCTTTCATAATACTCATCTATGGCTTGACAGCAGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR CAA 90 bp | GACTGCTGTCAAGCCATAGATGAGTATTATGAAAGAGAAATTGTATACCTTTCATTCTGTCCAGGACAATaGCTGTTATCATCAGTATCC | + |
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Preference number: 5 (lower is better) Translates to: DCCQAIDEYYEREIVYLSFCPGQ*LLSSVS Trigger: GGATACTGATGATAACAGCAATTGTCCTGGACAGAA...TGAAAGGTATACAATTTCTCTTTCATAATACTCATCTATGGCTTGACAGCAGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS-3UTR CAA 90 bp | GACTGCTGTCAAGCCATAGATGAGTATTATGAAAGAGAAATTGTATACCTTTCATTTCTTATGATCAAATaGCATAGGATGAAGCCGTTC | + |
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Preference number: 5 (lower is better) Translates to: DCCQAIDEYYEREIVYLSFLMIK*HRMKPF Trigger: GAACGGCTTCATCCTATGCAATTTGATCATAAGAAA...TGAAAGGTATACAATTTCTCTTTCATAATACTCATCTATGGCTTGACAGCAGTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS CCA 72 bp | GAACTGGTTGCCAAACATCATGTAGCTGTCTTTAATTaGAGGAGGAGGCTTGGGAGCCAAGCCTTCCTGAAT | + |
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Preference number: 6 (lower is better) Translates to: ELVAKHHVAVFN*RRRLGSQAFLN Trigger: ATTCAGGAAGGCTTGGCTCCCAAGCCTCCTCCTCCAATTAAAGACAGCTACATGATGTTTGGCAACCAGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000020665.13 ENSMUST00000109231.2 ENSMUST00000109232.4 ENSMUST00000128940.2 ENSMUST00000133635.2 ENSMUST00000140027.8 ENSMUST00000152119.2 ENSMUST00000170928.8 |
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| CDS CCA 72 bp | ATCGGCTCAGCTTTAACTCTCATCCCTGCTTCTGAATaGGGCAAATCATCGGGCAAAGAAGCCAAGCAATTC | + |
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Preference number: 6 (lower is better) Translates to: IGSALTLIPASE*GKSSGKEAKQF Trigger: GAATTGCTTGGCTTCTTTGCCCGATGATTTGCCCCATTCAGAAGCAGGGATGAGAGTTAAAGCTGAGCCGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020665.13 ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS TCA 72 bp | TTAATTGGAGGAGGAGGCTTGGGAGCCAAGCCTTCCTaGATATTTTCATCTGTATATTCCTTGATGTACTGC | + |
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Preference number: 6 (lower is better) Translates to: LIGGGGLGAKPS*IFSSVYSLMYC Trigger: GCAGTACATCAAGGAATATACAGATGAAAATATTCAGGAAGGCTTGGCTCCCAAGCCTCCTCCTCCAATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000020665.13 ENSMUST00000109231.2 ENSMUST00000109232.4 ENSMUST00000128940.2 ENSMUST00000133635.2 ENSMUST00000140027.8 ENSMUST00000152119.2 ENSMUST00000170928.8 |
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| CDS CAA 72 bp | CTGGACCTCCATCATGACTCTCAAAGTCTCTCTTGCTaGGTGGGGTCGATATTCATTTATAAGATGATGTAC | + |
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Preference number: 6 (lower is better) Translates to: LDLHHDSQSLSC*VGSIFIYKMMY Trigger: GTACATCATCTTATAAATGAATATCGACCCCACCAAGCAAGAGAGACTTTGAGAGTCATGATGGAGGTCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020665.13 ENSMUST00000109231.2 ENSMUST00000109232.4 ENSMUST00000128940.2 ENSMUST00000170928.8 |
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| CDS CAA 90 bp | CTGGCGTTTCTGGACCTCCATCATGACTCTCAAAGTCTCTCTTGCTaGGTGGGGTCGATATTCATTTATAAGATGATGTACATGTACAAA | + |
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Preference number: 6 (lower is better) Translates to: LAFLDLHHDSQSLSC*VGSIFIYKMMYMYK Trigger: TTTGTACATGTACATCATCTTATAAATGAATATCGACCCCACCAAGCAAGAGAGACTTTGAGAGTCATGATGGAGGTCCAGAAACGCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020665.13 ENSMUST00000109231.2 ENSMUST00000109232.4 ENSMUST00000128940.2 ENSMUST00000170928.8 |
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| CDS GCA 72 bp | TTTCTGGACCTCCATCATGACTCTCAAAGTCTCTCTTaGTTGGTGGGGTCGATATTCATTTATAAGATGATG | + |
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Preference number: 6 (lower is better) Translates to: FLDLHHDSQSLS*LVGSIFIYKMM Trigger: CATCATCTTATAAATGAATATCGACCCCACCAAGCAAGAGAGACTTTGAGAGTCATGATGGAGGTCCAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020665.13 ENSMUST00000109231.2 ENSMUST00000109232.4 ENSMUST00000128940.2 ENSMUST00000170928.8 |
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| CDS TCA 72 bp | AGCATCTTTTTCTATAATCTGGTCCCTTCTGTGACCTaGACTTTCTCTTTGTTGTTCATTCTGTCCAGGACA | + |
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Preference number: 6 (lower is better) Translates to: SIFFYNLVPSVT*TFSLLFILSRT Trigger: TGTCCTGGACAGAATGAACAACAAAGAGAAAGTTCAGGTCACAGAAGGGACCAGATTATAGAAAAAGATGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020665.13 ENSMUST00000109232.4 ENSMUST00000170928.8 |
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| CDS CAA 72 bp | GAACTTTCTCTTTGTTGTTCATTCTGTCCAGGACAATaGCTGTTATCATCAGTATCCATCGGCTCAGCTTTA | + |
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Preference number: 6 (lower is better) Translates to: ELSLCCSFCPGQ*LLSSVSIGSAL Trigger: TAAAGCTGAGCCGATGGATACTGATGATAACAGCAATTGTCCTGGACAGAATGAACAACAAAGAGAAAGTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020665.13 ENSMUST00000109232.4 ENSMUST00000170928.8 |
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