Pregenerated sensors for MED6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002679Ensembl transcript IDs: ENSMUST00000002756.14, ENSMUST00000161211.8, ENSMUST00000161598.8
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GTGCATTCCGTACAAACTGCGATAGTGTTTCCAGGCTCAAGAGCCTCCCACGGTCGACTGACAAGGAGCTaGCCAGCTTCTTCCTCGTCC | + |
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Preference number: 2 (lower is better) Translates to: VHSVQTAIVFPGSRASHGRLTRS*PASSSS Trigger: GGACGAGGAAGAAGCTGGCCAGCTCCTTGTCAGTCG...ACCGTGGGAGGCTCTTGAGCCTGGAAACACTATCGCAGTTTGTACGGAATGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGAGCTGGCCAGCTTCTTCCTCGTCCAACATTCACTGGAGTCTCATTCGTTTCGACTGACAAGGAGCTaGCCAGCTTCTTCCTCGTCC | + |
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Preference number: 2 (lower is better) Translates to: KELASFFLVQHSLESHSFRLTRS*PASSSS Trigger: GGACGAGGAAGAAGCTGGCCAGCTCCTTGTCAGTCG...AAACGAATGAGACTCCAGTGAATGTTGGACGAGGAAGAAGCTGGCCAGCTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161598.8 |
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| 3UTR-3UTR GCA 90 bp | GCATTCCGTACAAACTGCGATAGTGTTTCCAGGCTCAAGAGCCTCCCACGGTGCGCATTCCGTACAAACTaGGATAGTGTTTCCAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: AFRTNCDSVSRLKSLPRCAFRTN*DSVSRL Trigger: GAGCCTGGAAACACTATCGCAGTTTGTACGGAATGC...GCACCGTGGGAGGCTCTTGAGCCTGGAAACACTATCGCAGTTTGTACGGAATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| 3UTR-3UTR CCA 90 bp | CATATCTGTGAGTTAGGTGCACTGCCCAAGTCCAGTAGAGGAAAGATTACAAAACGACTGACAAGGAGCTaGCCAGCTTCTTCCTCGTCC | + |
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Preference number: 2 (lower is better) Translates to: HICELGALPKSSRGKITKRLTRS*PASSSS Trigger: GGACGAGGAAGAAGCTGGCCAGCTCCTTGTCAGTCG...TTTTGTAATCTTTCCTCTACTGGACTTGGGCAGTGCACCTAACTCACAGATATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| 3UTR-3UTR TCA 90 bp | CATATCTGTGAGTTAGGTGCACTGCCCAAGTCCAGTAGAGGAAAGATTACAAAACTGAGGTATAGCGACTaGCAAGGAGCTGGCCAGCTT | + |
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Preference number: 2 (lower is better) Translates to: HICELGALPKSSRGKITKLRYSD*QGAGQL Trigger: AAGCTGGCCAGCTCCTTGTCAGTCGCTATACCTCAG...TTTTGTAATCTTTCCTCTACTGGACTTGGGCAGTGCACCTAACTCACAGATATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| 3UTR-3UTR TCA 90 bp | ATCTGTGAGTTAGGTGCACTGCCCAAGTCCAGTAGAGGAAAGATTACAAAAGATCTGAGGTATAGCGACTaGCAAGGAGCTGGCCAGCTT | + |
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Preference number: 2 (lower is better) Translates to: ICELGALPKSSRGKITKDLRYSD*QGAGQL Trigger: AAGCTGGCCAGCTCCTTGTCAGTCGCTATACCTCAG...ATCTTTTGTAATCTTTCCTCTACTGGACTTGGGCAGTGCACCTAACTCACAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| 3UTR-3UTR GCA 90 bp | CATATCTGTGAGTTAGGTGCACTGCCCAAGTCCAGTAGAGGAAAGATTACAAAAGCATTCCGTACAAACTaGGATAGTGTTTCCAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: HICELGALPKSSRGKITKAFRTN*DSVSRL Trigger: GAGCCTGGAAACACTATCGCAGTTTGTACGGAATGC...TTTTGTAATCTTTCCTCTACTGGACTTGGGCAGTGCACCTAACTCACAGATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| 3UTR TCA 72 bp | GCTCAAGAGCCTCCCACGGTGCTGAGGTATAGCGACTaGCAAGGAGCTGGCCAGCTTCTTCCTCGTCCAACA | + |
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Preference number: 3 (lower is better) Translates to: AQEPPTVLRYSD*QGAGQLLPRPT Trigger: TGTTGGACGAGGAAGAAGCTGGCCAGCTCCTTGTCAGTCGCTATACCTCAGCACCGTGGGAGGCTCTTGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| 3UTR TCA 72 bp | GATAGTGTTTCCAGGCTCAAGAGCCTCCCACGGTGCTaGGGTATAGCGACTGACAAGGAGCTGGCCAGCTTC | + |
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Preference number: 3 (lower is better) Translates to: DSVSRLKSLPRC*GIATDKELASF Trigger: GAAGCTGGCCAGCTCCTTGTCAGTCGCTATACCTCAGCACCGTGGGAGGCTCTTGAGCCTGGAAACACTATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| CDS-3UTR TCA 90 bp | CATTCCGTACAAACTGCGATAGTGTTTCCAGGCTCAAGAGCCTCCCACGGTGCTGCCAGTGGAATAACTTaGGCAGGGGACTGCCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HSVQTAIVFPGSRASHGAASGIT*AGDCRC Trigger: ACAGCGGCAGTCCCCTGCTCAAGTTATTCCACTGGC...AGCACCGTGGGAGGCTCTTGAGCCTGGAAACACTATCGCAGTTTGTACGGAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| CDS-3UTR TCA 90 bp | AAGGAGCTGGCCAGCTTCTTCCTCGTCCAACATTCACTGGAGTCTCATTCGTTTGCCAGTGGAATAACTTaGGCAGGGGACTGCCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: KELASFFLVQHSLESHSFASGIT*AGDCRC Trigger: ACAGCGGCAGTCCCCTGCTCAAGTTATTCCACTGGC...AAACGAATGAGACTCCAGTGAATGTTGGACGAGGAAGAAGCTGGCCAGCTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161598.8 |
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| CDS-3UTR TCA 90 bp | GCATTCCGTACAAACTGCGATAGTGTTTCCAGGCTCAAGAGCCTCCCACGGTGCTCTGGAGTTTATAACTaGTCCCAAGTCTGGCGCCTG | + |
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Preference number: 4 (lower is better) Translates to: AFRTNCDSVSRLKSLPRCSGVYN*SQVWRL Trigger: CAGGCGCCAGACTTGGGATCAGTTATAAACTCCAGA...GCACCGTGGGAGGCTCTTGAGCCTGGAAACACTATCGCAGTTTGTACGGAATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| CDS-3UTR TCA 90 bp | CATTCCGTACAAACTGCGATAGTGTTTCCAGGCTCAAGAGCCTCCCACGGTGCTTCTGGAGTTTATAACTaGTCCCAAGTCTGGCGCCTG | + |
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Preference number: 4 (lower is better) Translates to: HSVQTAIVFPGSRASHGASGVYN*SQVWRL Trigger: CAGGCGCCAGACTTGGGATCAGTTATAAACTCCAGA...AGCACCGTGGGAGGCTCTTGAGCCTGGAAACACTATCGCAGTTTGTACGGAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| CDS-3UTR GCA 90 bp | TCCGTACAAACTGCGATAGTGTTTCCAGGCTCAAGAGCCTCCCACGGTGCTGAGAGTAATCCAGGACACTaGCACTGTTCAAGATGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SVQTAIVFPGSRASHGAESNPGH*HCSRWG Trigger: TCCCCATCTTGAACAGTGGCAGTGTCCTGGATTACT...CTCAGCACCGTGGGAGGCTCTTGAGCCTGGAAACACTATCGCAGTTTGTACGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| CDS-3UTR CCA 90 bp | TCCGTACAAACTGCGATAGTGTTTCCAGGCTCAAGAGCCTCCCACGGTGCTGAGTTTTGCCTGATCCACTaGGACAGGCTTTTCTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: SVQTAIVFPGSRASHGAEFCLIH*DRLFSR Trigger: TCTGGAGAAAAGCCTGTCCCAGTGGATCAGGCAAAA...CTCAGCACCGTGGGAGGCTCTTGAGCCTGGAAACACTATCGCAGTTTGTACGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| CDS-3UTR TCA 90 bp | CTGGCCAGCTTCTTCCTCGTCCAACATTCACTGGAGTCTCATTCGTTTCTCAGGTCTGGAGTTTATAACTaGTCCCAAGTCTGGCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LASFFLVQHSLESHSFLRSGVYN*SQVWRL Trigger: CAGGCGCCAGACTTGGGATCAGTTATAAACTCCAGA...CCTGAGAAACGAATGAGACTCCAGTGAATGTTGGACGAGGAAGAAGCTGGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161598.8 |
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| CDS-3UTR GCA 90 bp | CATTCCGTACAAACTGCGATAGTGTTTCCAGGCTCAAGAGCCTCCCACGGTGCTGGGGACTGCCGCTGTTaGTTTCGAATGATGAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: HSVQTAIVFPGSRASHGAGDCRC*FRMMKR Trigger: TCTTTTCATCATTCGAAAGCAACAGCGGCAGTCCCC...AGCACCGTGGGAGGCTCTTGAGCCTGGAAACACTATCGCAGTTTGTACGGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| CDS-3UTR GCA 90 bp | GTGCATTCCGTACAAACTGCGATAGTGTTTCCAGGCTCAAGAGCCTCCCACGGTGGGGACTGCCGCTGTTaGTTTCGAATGATGAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VHSVQTAIVFPGSRASHGGDCRC*FRMMKR Trigger: TCTTTTCATCATTCGAAAGCAACAGCGGCAGTCCCC...ACCGTGGGAGGCTCTTGAGCCTGGAAACACTATCGCAGTTTGTACGGAATGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| CDS-3UTR CCA 90 bp | TCCGTACAAACTGCGATAGTGTTTCCAGGCTCAAGAGCCTCCCACGGTGCTGAGGCCACCAATATCCTTTaGAAGGATGGTATCGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: SVQTAIVFPGSRASHGAEATNIL*KDGIDS Trigger: ACTGTCGATACCATCCTTCCAAAGGATATTGGTGGC...CTCAGCACCGTGGGAGGCTCTTGAGCCTGGAAACACTATCGCAGTTTGTACGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| CDS-3UTR CCA 90 bp | GCATTCCGTACAAACTGCGATAGTGTTTCCAGGCTCAAGAGCCTCCCACGGTGCGCCACCAATATCCTTTaGAAGGATGGTATCGACAGT | + |
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Preference number: 4 (lower is better) Translates to: AFRTNCDSVSRLKSLPRCATNIL*KDGIDS Trigger: ACTGTCGATACCATCCTTCCAAAGGATATTGGTGGC...GCACCGTGGGAGGCTCTTGAGCCTGGAAACACTATCGCAGTTTGTACGGAATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| CDS-3UTR CCA 90 bp | GTGCATTCCGTACAAACTGCGATAGTGTTTCCAGGCTCAAGAGCCTCCCACGGTTTTTGCCTGATCCACTaGGACAGGCTTTTCTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: VHSVQTAIVFPGSRASHGFCLIH*DRLFSR Trigger: TCTGGAGAAAAGCCTGTCCCAGTGGATCAGGCAAAA...ACCGTGGGAGGCTCTTGAGCCTGGAAACACTATCGCAGTTTGTACGGAATGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| CDS-3UTR CCA 90 bp | AGTGCATTCCGTACAAACTGCGATAGTGTTTCCAGGCTCAAGAGCCTCCCACGGTGCCACTGTTCAAGATaGGGATCCAAGAGCTGTCAA | + |
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Preference number: 4 (lower is better) Translates to: SAFRTNCDSVSRLKSLPRCHCSR*GSKSCQ Trigger: TTGACAGCTCTTGGATCCCCATCTTGAACAGTGGCA...CCGTGGGAGGCTCTTGAGCCTGGAAACACTATCGCAGTTTGTACGGAATGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| CDS-3UTR TCA 90 bp | CATTCCGTACAAACTGCGATAGTGTTTCCAGGCTCAAGAGCCTCCCACGGTGCTTCAGCCTCTGCATTTTaGCCACCTCATTATTACACG | + |
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Preference number: 4 (lower is better) Translates to: HSVQTAIVFPGSRASHGASASAF*PPHYYT Trigger: CGTGTAATAATGAGGTGGTCAAAATGCAGAGGCTGA...AGCACCGTGGGAGGCTCTTGAGCCTGGAAACACTATCGCAGTTTGTACGGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| CDS-3UTR GCA 90 bp | AGTGCATTCCGTACAAACTGCGATAGTGTTTCCAGGCTCAAGAGCCTCCCACGGCTGAATTCCATGCACTaGAGTAAGCACTCTGGAGTT | + |
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Preference number: 4 (lower is better) Translates to: SAFRTNCDSVSRLKSLPRLNSMH*SKHSGV Trigger: AACTCCAGAGTGCTTACTGCAGTGCATGGAATTCAG...CCGTGGGAGGCTCTTGAGCCTGGAAACACTATCGCAGTTTGTACGGAATGCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| CDS-3UTR GCA 90 bp | TCCGTACAAACTGCGATAGTGTTTCCAGGCTCAAGAGCCTCCCACGGTGCTGAGGCTGAATGTTCTTTGTaGTCTCCTTCTCCTCAGATT | + |
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Preference number: 4 (lower is better) Translates to: SVQTAIVFPGSRASHGAEAECSL*SPSPQI Trigger: AATCTGAGGAGAAGGAGAGCACAAAGAACATTCAGC...CTCAGCACCGTGGGAGGCTCTTGAGCCTGGAAACACTATCGCAGTTTGTACGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 |
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| CDS-3UTR CCA 90 bp | CCAGCTTCTTCCTCGTCCAACATTCACTGGAGTCTCATTCGTTTCTCAGGGGGATGCCACTGTTCAAGATaGGGATCCAAGAGCTGTCAA | + |
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Preference number: 4 (lower is better) Translates to: PASSSSNIHWSLIRFSGGCHCSR*GSKSCQ Trigger: TTGACAGCTCTTGGATCCCCATCTTGAACAGTGGCA...TCCCCCTGAGAAACGAATGAGACTCCAGTGAATGTTGGACGAGGAAGAAGCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161598.8 |
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| CDS-3UTR TCA 90 bp | CATATCTGTGAGTTAGGTGCACTGCCCAAGTCCAGTAGAGGAAAGATTACAAAAGCCAGTGGAATAACTTaGGCAGGGGACTGCCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: HICELGALPKSSRGKITKASGIT*AGDCRC Trigger: ACAGCGGCAGTCCCCTGCTCAAGTTATTCCACTGGC...TTTTGTAATCTTTCCTCTACTGGACTTGGGCAGTGCACCTAACTCACAGATATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| CDS-3UTR TCA 90 bp | GCATTCCGTACAAACTGCGATAGTGTTTCCAGGCTCAAGAGCCTCCCACGGTGCATGGTATCGACAGTATaGCATAGCTTCATCAAAAGC | + |
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Preference number: 4 (lower is better) Translates to: AFRTNCDSVSRLKSLPRCMVSTV*HSFIKS Trigger: GCTTTTGATGAAGCTATGTCATACTGTCGATACCAT...GCACCGTGGGAGGCTCTTGAGCCTGGAAACACTATCGCAGTTTGTACGGAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| CDS-3UTR TCA 90 bp | GCATTCCGTACAAACTGCGATAGTGTTTCCAGGCTCAAGAGCCTCCCACGGTGCTTCTCTTGTTCTTCGTaGTCTTTAAAGTGCCACCAA | + |
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Preference number: 4 (lower is better) Translates to: AFRTNCDSVSRLKSLPRCFSCSS*SLKCHQ Trigger: TTGGTGGCACTTTAAAGATCACGAAGAACAAGAGAA...GCACCGTGGGAGGCTCTTGAGCCTGGAAACACTATCGCAGTTTGTACGGAATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 |
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| CDS-3UTR TCA 90 bp | AGTGCATTCCGTACAAACTGCGATAGTGTTTCCAGGCTCAAGAGCCTCCCACGGTCCACACGCTGTCTTTaGAAAATAGAGCTTGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: SAFRTNCDSVSRLKSLPRSTRCL*KIELGS Trigger: AGAACCAAGCTCTATTTTTCAAAGACAGCGTGTGGA...CCGTGGGAGGCTCTTGAGCCTGGAAACACTATCGCAGTTTGTACGGAATGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 |
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| CDS-3UTR TCA 90 bp | AGTGCATTCCGTACAAACTGCGATAGTGTTTCCAGGCTCAAGAGCCTCCCACGGTCTCCAGACTTTTGCTaGACAAATCTGGGTGGAAAT | + |
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Preference number: 4 (lower is better) Translates to: SAFRTNCDSVSRLKSLPRSPDFC*TNLGGN Trigger: ATTTCCACCCAGATTTGTTCAGCAAAAGTCTGGAGA...CCGTGGGAGGCTCTTGAGCCTGGAAACACTATCGCAGTTTGTACGGAATGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 |
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| CDS-3UTR CCA 90 bp | TCCGTACAAACTGCGATAGTGTTTCCAGGCTCAAGAGCCTCCCACGGTGCTGAGCTGAACAAATCTGGGTaGAAATTTCTGTCTAAGGTC | + |
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Preference number: 4 (lower is better) Translates to: SVQTAIVFPGSRASHGAELNKSG*KFLSKV Trigger: GACCTTAGACAGAAATTTCCACCCAGATTTGTTCAG...CTCAGCACCGTGGGAGGCTCTTGAGCCTGGAAACACTATCGCAGTTTGTACGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 |
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| CDS-3UTR CCA 90 bp | AGCTGGCCAGCTTCTTCCTCGTCCAACATTCACTGGAGTCTCATTCGTTTCTCATTTTGCCTGATCCACTaGGACAGGCTTTTCTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: SWPASSSSNIHWSLIRFSFCLIH*DRLFSR Trigger: TCTGGAGAAAAGCCTGTCCCAGTGGATCAGGCAAAA...TGAGAAACGAATGAGACTCCAGTGAATGTTGGACGAGGAAGAAGCTGGCCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161598.8 |
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| CDS-3UTR CCA 90 bp | TCCGTACAAACTGCGATAGTGTTTCCAGGCTCAAGAGCCTCCCACGGTGCTGAGAGATTTTACAGTTTCTaGCAAAGGCTCTGCCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: SVQTAIVFPGSRASHGAERFYSF*QRLCLF Trigger: AAAGAGGCAGAGCCTTTGCCAGAAACTGTAAAATCT...CTCAGCACCGTGGGAGGCTCTTGAGCCTGGAAACACTATCGCAGTTTGTACGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| CDS-3UTR TCA 90 bp | CATTCCGTACAAACTGCGATAGTGTTTCCAGGCTCAAGAGCCTCCCACGGTGCTAGGATTGCTTCTTTCTaGAAAGTAATCCAGGACACT | + |
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Preference number: 4 (lower is better) Translates to: HSVQTAIVFPGSRASHGARIASF*KVIQDT Trigger: AGTGTCCTGGATTACTTTTCAGAAAGAAGCAATCCT...AGCACCGTGGGAGGCTCTTGAGCCTGGAAACACTATCGCAGTTTGTACGGAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| CDS-3UTR GCA 90 bp | TTCCTCGTCCAACATTCACTGGAGTCTCATTCGTTTCTCAGGGGGACCTTTAGTGGGGACTGCCGCTGTTaGTTTCGAATGATGAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: FLVQHSLESHSFLRGTFSGDCRC*FRMMKR Trigger: TCTTTTCATCATTCGAAAGCAACAGCGGCAGTCCCC...ACTAAAGGTCCCCCTGAGAAACGAATGAGACTCCAGTGAATGTTGGACGAGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000161598.8 |
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| CDS-3UTR CCA 90 bp | GCATTCCGTACAAACTGCGATAGTGTTTCCAGGCTCAAGAGCCTCCCACGGTGCTATCCTTTGGAAGGATaGTATCGACAGTATGACATA | + |
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Preference number: 4 (lower is better) Translates to: AFRTNCDSVSRLKSLPRCYPLEG*YRQYDI Trigger: TATGTCATACTGTCGATACCATCCTTCCAAAGGATA...GCACCGTGGGAGGCTCTTGAGCCTGGAAACACTATCGCAGTTTGTACGGAATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| CDS-3UTR CCA 90 bp | CATTCCGTACAAACTGCGATAGTGTTTCCAGGCTCAAGAGCCTCCCACGGTGCTAGATTTTACAGTTTCTaGCAAAGGCTCTGCCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: HSVQTAIVFPGSRASHGARFYSF*QRLCLF Trigger: AAAGAGGCAGAGCCTTTGCCAGAAACTGTAAAATCT...AGCACCGTGGGAGGCTCTTGAGCCTGGAAACACTATCGCAGTTTGTACGGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| CDS-3UTR TCA 90 bp | CATTCCGTACAAACTGCGATAGTGTTTCCAGGCTCAAGAGCCTCCCACGGTGCTAAAAGAATGGGCTCTTaGGCATGTAAAAGGATGTAT | + |
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Preference number: 4 (lower is better) Translates to: HSVQTAIVFPGSRASHGAKRMGS*ACKRMY Trigger: ATACATCCTTTTACATGCTCAAGAGCCCATTCTTTT...AGCACCGTGGGAGGCTCTTGAGCCTGGAAACACTATCGCAGTTTGTACGGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| CDS-3UTR TCA 90 bp | CTGGCCAGCTTCTTCCTCGTCCAACATTCACTGGAGTCTCATTCGTTTCTCAGGTTTGCTTGTTCTTCGTaGTCTTTAAAGTGCCACCAA | + |
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Preference number: 4 (lower is better) Translates to: LASFFLVQHSLESHSFLRFACSS*SLKCHQ Trigger: TTGGTGGCACTTTAAAGATCACGAAGAACAAGCAAA...CCTGAGAAACGAATGAGACTCCAGTGAATGTTGGACGAGGAAGAAGCTGGCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161598.8 |
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| CDS-3UTR TCA 90 bp | AGCTGGCCAGCTTCTTCCTCGTCCAACATTCACTGGAGTCTCATTCGTTTCTCAATGGTATCGACAGTATaGCATAGCTTCATCAAAAGC | + |
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Preference number: 4 (lower is better) Translates to: SWPASSSSNIHWSLIRFSMVSTV*HSFIKS Trigger: GCTTTTGATGAAGCTATGTCATACTGTCGATACCAT...TGAGAAACGAATGAGACTCCAGTGAATGTTGGACGAGGAAGAAGCTGGCCAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161598.8 |
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| CDS-3UTR TCA 90 bp | AAGGAGCTGGCCAGCTTCTTCCTCGTCCAACATTCACTGGAGTCTCATTCGTTTAAAAGAATGGGCTCTTaGGCATGTAAAAGGATGTAT | + |
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Preference number: 4 (lower is better) Translates to: KELASFFLVQHSLESHSFKRMGS*ACKRMY Trigger: ATACATCCTTTTACATGCTCAAGAGCCCATTCTTTT...AAACGAATGAGACTCCAGTGAATGTTGGACGAGGAAGAAGCTGGCCAGCTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161598.8 |
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| CDS-3UTR GCA 90 bp | TTCTTCCTCGTCCAACATTCACTGGAGTCTCATTCGTTTCTCAGGGGGACCTTTTCTAATGTCAGCCTCTaGATTTTGACCACCTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: FFLVQHSLESHSFLRGTFSNVSL*ILTTSL Trigger: TAATGAGGTGGTCAAAATGCAGAGGCTGACATTAGA...AAAGGTCCCCCTGAGAAACGAATGAGACTCCAGTGAATGTTGGACGAGGAAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000161598.8 |
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| CDS-3UTR GCA 90 bp | GCTGGCCAGCTTCTTCCTCGTCCAACATTCACTGGAGTCTCATTCGTTTCTCAGTTTTCTCCAGACTTTTaGTTGTTCTTCGTGATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AGQLLPRPTFTGVSFVSQFSPDF*LFFVIF Trigger: AAAGATCACGAAGAACAAGCAAAAGTCTGGAGAAAA...CTGAGAAACGAATGAGACTCCAGTGAATGTTGGACGAGGAAGAAGCTGGCCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161598.8 |
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| CDS-3UTR CCA 90 bp | TTCTTCCTCGTCCAACATTCACTGGAGTCTCATTCGTTTCTCAGGGGGACCTTTAGATTTTACAGTTTCTaGCAAAGGCTCTGCCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FFLVQHSLESHSFLRGTFRFYSF*QRLCLF Trigger: AAAGAGGCAGAGCCTTTGCCAGAAACTGTAAAATCT...AAAGGTCCCCCTGAGAAACGAATGAGACTCCAGTGAATGTTGGACGAGGAAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161598.8 |
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| CDS-3UTR TCA 90 bp | CATATCTGTGAGTTAGGTGCACTGCCCAAGTCCAGTAGAGGAAAGATTACAAAATCAGCCTCTGCATTTTaGCCACCTCATTATTACACG | + |
|
Preference number: 4 (lower is better) Translates to: HICELGALPKSSRGKITKSASAF*PPHYYT Trigger: CGTGTAATAATGAGGTGGTCAAAATGCAGAGGCTGA...TTTTGTAATCTTTCCTCTACTGGACTTGGGCAGTGCACCTAACTCACAGATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| CDS-3UTR GCA 90 bp | CATATCTGTGAGTTAGGTGCACTGCCCAAGTCCAGTAGAGGAAAGATTACAAAACTGAATTCCATGCACTaGAGTAAGCACTCTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: HICELGALPKSSRGKITKLNSMH*SKHSGV Trigger: AACTCCAGAGTGCTTACTGCAGTGCATGGAATTCAG...TTTTGTAATCTTTCCTCTACTGGACTTGGGCAGTGCACCTAACTCACAGATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| CDS-3UTR TCA 90 bp | CATATCTGTGAGTTAGGTGCACTGCCCAAGTCCAGTAGAGGAAAGATTACAAAATCCACACGCTGTCTTTaGAAAATAGAGCTTGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HICELGALPKSSRGKITKSTRCL*KIELGS Trigger: AGAACCAAGCTCTATTTTTCAAAGACAGCGTGTGGA...TTTTGTAATCTTTCCTCTACTGGACTTGGGCAGTGCACCTAACTCACAGATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 |
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| CDS-3UTR TCA 90 bp | CATATCTGTGAGTTAGGTGCACTGCCCAAGTCCAGTAGAGGAAAGATTACAAAATCTCCAGACTTTTGCTaGACAAATCTGGGTGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HICELGALPKSSRGKITKSPDFC*TNLGGN Trigger: ATTTCCACCCAGATTTGTTCAGCAAAAGTCTGGAGA...TTTTGTAATCTTTCCTCTACTGGACTTGGGCAGTGCACCTAACTCACAGATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 |
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| CDS-3UTR GCA 90 bp | CATATCTGTGAGTTAGGTGCACTGCCCAAGTCCAGTAGAGGAAAGATTACAAAAGCTGAATGTTCTTTGTaGTCTCCTTCTCCTCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: HICELGALPKSSRGKITKAECSL*SPSPQI Trigger: AATCTGAGGAGAAGGAGAGCACAAAGAACATTCAGC...TTTTGTAATCTTTCCTCTACTGGACTTGGGCAGTGCACCTAACTCACAGATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 |
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| CDS-3UTR TCA 90 bp | CATATCTGTGAGTTAGGTGCACTGCCCAAGTCCAGTAGAGGAAAGATTACAAAAATGGTATCGACAGTATaGCATAGCTTCATCAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: HICELGALPKSSRGKITKMVSTV*HSFIKS Trigger: GCTTTTGATGAAGCTATGTCATACTGTCGATACCAT...TTTTGTAATCTTTCCTCTACTGGACTTGGGCAGTGCACCTAACTCACAGATATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| CDS-3UTR TCA 90 bp | CATATCTGTGAGTTAGGTGCACTGCCCAAGTCCAGTAGAGGAAAGATTACAAAATTCTCTTGTTCTTCGTaGTCTTTAAAGTGCCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: HICELGALPKSSRGKITKFSCSS*SLKCHQ Trigger: TTGGTGGCACTTTAAAGATCACGAAGAACAAGAGAA...TTTTGTAATCTTTCCTCTACTGGACTTGGGCAGTGCACCTAACTCACAGATATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 |
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| CDS-3UTR GCA 90 bp | ATCTGTGAGTTAGGTGCACTGCCCAAGTCCAGTAGAGGAAAGATTACAAAAGATTCTAATGTCAGCCTCTaGATTTTGACCACCTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: ICELGALPKSSRGKITKDSNVSL*ILTTSL Trigger: TAATGAGGTGGTCAAAATGCAGAGGCTGACATTAGA...ATCTTTTGTAATCTTTCCTCTACTGGACTTGGGCAGTGCACCTAACTCACAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| CDS-3UTR CCA 90 bp | ATCTGTGAGTTAGGTGCACTGCCCAAGTCCAGTAGAGGAAAGATTACAAAAGATCTGAACAAATCTGGGTaGAAATTTCTGTCTAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ICELGALPKSSRGKITKDLNKSG*KFLSKV Trigger: GACCTTAGACAGAAATTTCCACCCAGATTTGTTCAG...ATCTTTTGTAATCTTTCCTCTACTGGACTTGGGCAGTGCACCTAACTCACAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 |
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| CDS-3UTR CCA 90 bp | ATCTGTGAGTTAGGTGCACTGCCCAAGTCCAGTAGAGGAAAGATTACAAAAGATTATCCTTTGGAAGGATaGTATCGACAGTATGACATA | + |
|
Preference number: 4 (lower is better) Translates to: ICELGALPKSSRGKITKDYPLEG*YRQYDI Trigger: TATGTCATACTGTCGATACCATCCTTCCAAAGGATA...ATCTTTTGTAATCTTTCCTCTACTGGACTTGGGCAGTGCACCTAACTCACAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| CDS-3UTR CCA 90 bp | CATATCTGTGAGTTAGGTGCACTGCCCAAGTCCAGTAGAGGAAAGATTACAAAATATCCTTTGGAAGGATaGTATCGACAGTATGACATA | + |
|
Preference number: 4 (lower is better) Translates to: HICELGALPKSSRGKITKYPLEG*YRQYDI Trigger: TATGTCATACTGTCGATACCATCCTTCCAAAGGATA...TTTTGTAATCTTTCCTCTACTGGACTTGGGCAGTGCACCTAACTCACAGATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| CDS-3UTR CAA 90 bp | GCATTCCGTACAAACTGCGATAGTGTTTCCAGGCTCAAGAGCCTCCCACGGTGCAGCCAGTGGAATAACTaGAGCAGGGGACTGCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AFRTNCDSVSRLKSLPRCSQWNN*SRGLPL Trigger: CAGCGGCAGTCCCCTGCTCAAGTTATTCCACTGGCT...GCACCGTGGGAGGCTCTTGAGCCTGGAAACACTATCGCAGTTTGTACGGAATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| CDS-3UTR CAA 90 bp | CATTCCGTACAAACTGCGATAGTGTTTCCAGGCTCAAGAGCCTCCCACGGTGCTAGCCAGTGGAATAACTaGAGCAGGGGACTGCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HSVQTAIVFPGSRASHGASQWNN*SRGLPL Trigger: CAGCGGCAGTCCCCTGCTCAAGTTATTCCACTGGCT...AGCACCGTGGGAGGCTCTTGAGCCTGGAAACACTATCGCAGTTTGTACGGAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| CDS-3UTR CAA 90 bp | GCCAGCTTCTTCCTCGTCCAACATTCACTGGAGTCTCATTCGTTTCTCAGGGGGAGGGGACTGCCGCTGTaGCTTTCGAATGATGAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: ASFFLVQHSLESHSFLRGRGLPL*LSNDEK Trigger: CTTTTCATCATTCGAAAGCAACAGCGGCAGTCCCCT...CCCCCTGAGAAACGAATGAGACTCCAGTGAATGTTGGACGAGGAAGAAGCTGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000161598.8 |
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| CDS-3UTR CAA 90 bp | TCCGTACAAACTGCGATAGTGTTTCCAGGCTCAAGAGCCTCCCACGGTGCTGAGTCTGCTGAATGTTCTTaGTGCTCTCCTTCTCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SVQTAIVFPGSRASHGAESAECS*CSPSPQ Trigger: CTGAGGAGAAGGAGAGCACAAAGAACATTCAGCAGA...CTCAGCACCGTGGGAGGCTCTTGAGCCTGGAAACACTATCGCAGTTTGTACGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 |
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| CDS-3UTR CAA 90 bp | GTGCATTCCGTACAAACTGCGATAGTGTTTCCAGGCTCAAGAGCCTCCCACGGTTGCCACCAATATCCTTaGGAAGGATGGTATCGACAG | + |
|
Preference number: 5 (lower is better) Translates to: VHSVQTAIVFPGSRASHGCHQYP*EGWYRQ Trigger: CTGTCGATACCATCCTTCCAAAGGATATTGGTGGCA...ACCGTGGGAGGCTCTTGAGCCTGGAAACACTATCGCAGTTTGTACGGAATGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| CDS-3UTR CAA 90 bp | AGTGCATTCCGTACAAACTGCGATAGTGTTTCCAGGCTCAAGAGCCTCCCACGGTCTGCTGAATGTTCTTaGTGCTCTCCTTCTCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SAFRTNCDSVSRLKSLPRSAECS*CSPSPQ Trigger: CTGAGGAGAAGGAGAGCACAAAGAACATTCAGCAGA...CCGTGGGAGGCTCTTGAGCCTGGAAACACTATCGCAGTTTGTACGGAATGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 |
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| CDS-3UTR CAA 90 bp | TCCGTACAAACTGCGATAGTGTTTCCAGGCTCAAGAGCCTCCCACGGTGCTGAGGTCAGCCTCTGCATTTaGACCACCTCATTATTACAC | + |
|
Preference number: 5 (lower is better) Translates to: SVQTAIVFPGSRASHGAEVSLCI*TTSLLH Trigger: GTGTAATAATGAGGTGGTCAAAATGCAGAGGCTGAC...CTCAGCACCGTGGGAGGCTCTTGAGCCTGGAAACACTATCGCAGTTTGTACGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| CDS-3UTR CAA 90 bp | TCCGTACAAACTGCGATAGTGTTTCCAGGCTCAAGAGCCTCCCACGGTGCTGAGATCCACACGCTGTCTTaGAAAAATAGAGCTTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SVQTAIVFPGSRASHGAEIHTLS*KNRAWF Trigger: GAACCAAGCTCTATTTTTCAAAGACAGCGTGTGGAT...CTCAGCACCGTGGGAGGCTCTTGAGCCTGGAAACACTATCGCAGTTTGTACGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 |
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| CDS-3UTR CAA 90 bp | AGTGCATTCCGTACAAACTGCGATAGTGTTTCCAGGCTCAAGAGCCTCCCACGGCTTTTCTCCAGACTTTaGCTGAACAAATCTGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SAFRTNCDSVSRLKSLPRLFSRL*LNKSGW Trigger: CCACCCAGATTTGTTCAGCAAAAGTCTGGAGAAAAG...CCGTGGGAGGCTCTTGAGCCTGGAAACACTATCGCAGTTTGTACGGAATGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 |
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| CDS CCA 90 bp | TGCTTCTTTCTGAAAAGTAATCCAGGACACTGCCACTGTTCAAGATaGGGATCCAAGAGCTGTCAACCCAGGAGATCCCCAGCAGGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: CFFLKSNPGHCHCSR*GSKSCQPRRSPAGY Trigger: ATAACCTGCTGGGGATCTCCTGGGTTGACAGCTCTTGGATCCCCATCTTGAACAGTGGCAGTGTCCTGGATTACTTTTCAGAAAGAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| CDS-3UTR CAA 90 bp | CATATCTGTGAGTTAGGTGCACTGCCCAAGTCCAGTAGAGGAAAGATTACAAAAAGCCAGTGGAATAACTaGAGCAGGGGACTGCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HICELGALPKSSRGKITKSQWNN*SRGLPL Trigger: CAGCGGCAGTCCCCTGCTCAAGTTATTCCACTGGCT...TTTTGTAATCTTTCCTCTACTGGACTTGGGCAGTGCACCTAACTCACAGATATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| CDS-3UTR CAA 90 bp | GTCCAACATTCACTGGAGTCTCATTCGTTTCTCAGGGGGACCTTTAGTGCTCACTGCCACCAATATCCTTaGGAAGGATGGTATCGACAG | + |
|
Preference number: 5 (lower is better) Translates to: VQHSLESHSFLRGTFSAHCHQYP*EGWYRQ Trigger: CTGTCGATACCATCCTTCCAAAGGATATTGGTGGCA...GTGAGCACTAAAGGTCCCCCTGAGAAACGAATGAGACTCCAGTGAATGTTGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161598.8 |
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| CDS-3UTR CAA 90 bp | CTGGCCAGCTTCTTCCTCGTCCAACATTCACTGGAGTCTCATTCGTTTCTCAGGGTCAGCCTCTGCATTTaGACCACCTCATTATTACAC | + |
|
Preference number: 5 (lower is better) Translates to: LASFFLVQHSLESHSFLRVSLCI*TTSLLH Trigger: GTGTAATAATGAGGTGGTCAAAATGCAGAGGCTGAC...CCTGAGAAACGAATGAGACTCCAGTGAATGTTGGACGAGGAAGAAGCTGGCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161598.8 |
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| CDS-3UTR CAA 90 bp | CATATCTGTGAGTTAGGTGCACTGCCCAAGTCCAGTAGAGGAAAGATTACAAAAAGGGGACTGCCGCTGTaGCTTTCGAATGATGAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: HICELGALPKSSRGKITKRGLPL*LSNDEK Trigger: CTTTTCATCATTCGAAAGCAACAGCGGCAGTCCCCT...TTTTGTAATCTTTCCTCTACTGGACTTGGGCAGTGCACCTAACTCACAGATATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| CDS-3UTR CAA 90 bp | AGGGGGACCTTTAGTGCTCACAGTCTGCTGAATGTTCTTTGTGCTCTCCTTCTCCTTTTCTCCAGACTTTaGCTTGTTCTTCGTGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: RGTFSAHSLLNVLCALLLLFSRL*LVLRDL Trigger: AAGATCACGAAGAACAAGCAAAAGTCTGGAGAAAAG...GAGAAGGAGAGCACAAAGAACATTCAGCAGACTGTGAGCACTAAAGGTCCCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161598.8 |
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| CDS-3UTR CAA 90 bp | CATATCTGTGAGTTAGGTGCACTGCCCAAGTCCAGTAGAGGAAAGATTACAAAATGCCACCAATATCCTTaGGAAGGATGGTATCGACAG | + |
|
Preference number: 5 (lower is better) Translates to: HICELGALPKSSRGKITKCHQYP*EGWYRQ Trigger: CTGTCGATACCATCCTTCCAAAGGATATTGGTGGCA...TTTTGTAATCTTTCCTCTACTGGACTTGGGCAGTGCACCTAACTCACAGATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| CDS-3UTR CAA 90 bp | GTCCAACATTCACTGGAGTCTCATTCGTTTCTCAGGGGGACCTTTAGTGCTCACTCTCCAGACTTTTGCTaGTTCTTCGTGATCTTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: VQHSLESHSFLRGTFSAHSPDFC*FFVIFK Trigger: TTTAAAGATCACGAAGAACAAGCAAAAGTCTGGAGA...GTGAGCACTAAAGGTCCCCCTGAGAAACGAATGAGACTCCAGTGAATGTTGGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161598.8 |
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| CDS TCA 90 bp | CACCTCATTATTACACGTCCTGTCATAGAAAGGATTGCTTCTTTCTaGAAAGTAATCCAGGACACTGCCACTGTTCAAGATGGGGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: HLIITRPVIERIASF*KVIQDTATVQDGDP Trigger: TGGATCCCCATCTTGAACAGTGGCAGTGTCCTGGATTACTTTTCAGAAAGAAGCAATCCTTTCTATGACAGGACGTGTAATAATGAGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| CDS-3UTR CAA 90 bp | CATATCTGTGAGTTAGGTGCACTGCCCAAGTCCAGTAGAGGAAAGATTACAAAACTTTTCTCCAGACTTTaGCTGAACAAATCTGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: HICELGALPKSSRGKITKLFSRL*LNKSGW Trigger: CCACCCAGATTTGTTCAGCAAAAGTCTGGAGAAAAG...TTTTGTAATCTTTCCTCTACTGGACTTGGGCAGTGCACCTAACTCACAGATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 |
||
| CDS TCA 90 bp | TTCCAACCATCTGATTCAAGTGCTCTAATGTCAGCCTCTGCATTTTaGCCACCTCATTATTACACGTCCTGTCATAGAAAGGATTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FQPSDSSALMSASAF*PPHYYTSCHRKDCF Trigger: GAAGCAATCCTTTCTATGACAGGACGTGTAATAATGAGGTGGTCAAAATGCAGAGGCTGACATTAGAGCACTTGAATCAGATGGTTGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161211.8 ENSMUST00000161598.8 |
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| CDS-3UTR CAA 90 bp | CATATCTGTGAGTTAGGTGCACTGCCCAAGTCCAGTAGAGGAAAGATTACAAAAATCCACACGCTGTCTTaGAAAAATAGAGCTTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: HICELGALPKSSRGKITKIHTLS*KNRAWF Trigger: GAACCAAGCTCTATTTTTCAAAGACAGCGTGTGGAT...TTTTGTAATCTTTCCTCTACTGGACTTGGGCAGTGCACCTAACTCACAGATATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000002756.14 ENSMUST00000161211.8 |
||
| CDS TCA 72 bp | GGACAGGCTTTTCTCCAGACTTTTGCTTGTTCTTCGTaGTCTTTAAAGTGCCACCAATATCCTTTGGAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GQAFLQTFACSS*SLKCHQYPLEG Trigger: TCCTTCCAAAGGATATTGGTGGCACTTTAAAGATCACGAAGAACAAGCAAAAGTCTGGAGAAAAGCCTGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161598.8 |
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