Pregenerated sensors for MED29 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003444Ensembl transcript IDs: ENSMUST00000003536.9
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATCATCGGCCCAGTGGGAAGGTCCACTCCAGGTTGGGGAGCAGCGTaGGTGGAGGCAACAGTGGTGTGGTGGTGGTGGGGTTTGAGGTCT | + |
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Preference number: 1 (lower is better) Translates to: IIGPVGRSTPGWGAA*VEATVVWWWWGLRS Trigger: AGACCTCAAACCCCACCACCACCACACCACTGTTGCCTCCACCCACGCTGCTCCCCAACCTGGAGTGGACCTTCCCACTGGGCCGATGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| 3UTR CCA 90 bp | ACTCCAGGTTGGGGAGCAGCGTGGGTGGAGGCAACAGTGGTGTGGTaGTGGTGGGGTTTGAGGTCTGTGCTGTCTGCAAGACTCTGCTGC | + |
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Preference number: 1 (lower is better) Translates to: TPGWGAAWVEATVVW*WWGLRSVLSARLCC Trigger: GCAGCAGAGTCTTGCAGACAGCACAGACCTCAAACCCCACCACCACCACACCACTGTTGCCTCCACCCACGCTGCTCCCCAACCTGGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| 3UTR CCA 90 bp | AGAACAGAGGTAATCATCGGCCCAGTGGGAAGGTCCACTCCAGGTTaGGGAGCAGCGTGGGTGGAGGCAACAGTGGTGTGGTGGTGGTGG | + |
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Preference number: 1 (lower is better) Translates to: RTEVIIGPVGRSTPG*GAAWVEATVVWWWW Trigger: CCACCACCACCACACCACTGTTGCCTCCACCCACGCTGCTCCCCAACCTGGAGTGGACCTTCCCACTGGGCCGATGATTACCTCTGTTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| 3UTR GCA 90 bp | TGGTGGTGGTGGGGTTTGAGGTCTGTGCTGTCTGCAAGACTCTGCTaGCCCCTGCTGGTTTCAGCTGCATTACTGTGGCACGGACAAATC | + |
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Preference number: 1 (lower is better) Translates to: WWWWGLRSVLSARLC*PLLVSAALLWHGQI Trigger: GATTTGTCCGTGCCACAGTAATGCAGCTGAAACCAGCAGGGGGCAGCAGAGTCTTGCAGACAGCACAGACCTCAAACCCCACCACCACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| 3UTR-3UTR GCA 90 bp | GGCCCAGTGGGAAGGTCCACTCCAGGTTGGGGAGCAGCGTGGGTGGAGGCAACAGACTCTGCTGCCCCCTaGTGGTTTCAGCTGCATTAC | + |
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Preference number: 2 (lower is better) Translates to: GPVGRSTPGWGAAWVEATDSAAP*WFQLHY Trigger: GTAATGCAGCTGAAACCAGCAGGGGGCAGCAGAGTC...TGTTGCCTCCACCCACGCTGCTCCCCAACCTGGAGTGGACCTTCCCACTGGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| 3UTR-3UTR CCA 90 bp | AGTCAGAGTCCCCAGAACAGAGGTAATCATCGGCCCAGTGGGAAGGTCCACTCCGTGGTGTGGTGGTGGTaGGGTTTGAGGTCTGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: SQSPQNRGNHRPSGKVHSVVWWW*GLRSVL Trigger: CAGCACAGACCTCAAACCCCACCACCACCACACCAC...GGAGTGGACCTTCCCACTGGGCCGATGATTACCTCTGTTCTGGGGACTCTGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| 3UTR-3UTR CCA 90 bp | AGAGTCCCCAGAACAGAGGTAATCATCGGCCCAGTGGGAAGGTCCACTCCAGGTACAGTGGTGTGGTGGTaGTGGGGTTTGAGGTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: RVPRTEVIIGPVGRSTPGTVVWW*WGLRSV Trigger: CACAGACCTCAAACCCCACCACCACCACACCACTGT...ACCTGGAGTGGACCTTCCCACTGGGCCGATGATTACCTCTGTTCTGGGGACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| 3UTR CCA 72 bp | CCAGTGGGAAGGTCCACTCCAGGTTGGGGAGCAGCGTaGGTGGAGGCAACAGTGGTGTGGTGGTGGTGGGGT | + |
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Preference number: 3 (lower is better) Translates to: PVGRSTPGWGAA*VEATVVWWWWG Trigger: ACCCCACCACCACCACACCACTGTTGCCTCCACCCACGCTGCTCCCCAACCTGGAGTGGACCTTCCCACTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| 3UTR GCA 72 bp | TGGGGTTTGAGGTCTGTGCTGTCTGCAAGACTCTGCTaGCCCCTGCTGGTTTCAGCTGCATTACTGTGGCAC | + |
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Preference number: 3 (lower is better) Translates to: WGLRSVLSARLC*PLLVSAALLWH Trigger: GTGCCACAGTAATGCAGCTGAAACCAGCAGGGGGCAGCAGAGTCTTGCAGACAGCACAGACCTCAAACCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| 3UTR GCA 72 bp | TGGTGGGGTTTGAGGTCTGTGCTGTCTGCAAGACTCTaGTGCCCCCTGCTGGTTTCAGCTGCATTACTGTGG | + |
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Preference number: 3 (lower is better) Translates to: WWGLRSVLSARL*CPLLVSAALLW Trigger: CCACAGTAATGCAGCTGAAACCAGCAGGGGGCAGCAGAGTCTTGCAGACAGCACAGACCTCAAACCCCACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| 3UTR-3UTR CAA 90 bp | GCCCTAGTAACCCAGGCATTTTGGTTCCTCTTGTATAATACGATCCCAGTTAGGCAGGAACCACCTGTTTaGCCTCAGGCCATACTTCAT | + |
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Preference number: 3 (lower is better) Translates to: ALVTQAFWFLLYNTIPVRQEPPV*PQAILH Trigger: ATGAAGTATGGCCTGAGGCAAAACAGGTGGTTCCTG...CCTAACTGGGATCGTATTATACAAGAGGAACCAAAATGCCTGGGTTACTAGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| 3UTR CCA 72 bp | AAGTCCCTTCCTGTAGCCCTAGTAACCCAGGCATTTTaGTTCCTCTTGTATAATACGATCCCAGTTAGGTGT | + |
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Preference number: 3 (lower is better) Translates to: KSLPVALVTQAF*FLLYNTIPVRC Trigger: ACACCTAACTGGGATCGTATTATACAAGAGGAACCAAAATGCCTGGGTTACTAGGGCTACAGGAAGGGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS-3UTR CCA 90 bp | ATCATCGGCCCAGTGGGAAGGTCCACTCCAGGTTGGGGAGCAGCGTGGGTGGAGGGTTGTGGCTGTTGCTaGGGACCCGGACCCCCGGCA | + |
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Preference number: 4 (lower is better) Translates to: IIGPVGRSTPGWGAAWVEGCGCC*GPGPPA Trigger: TGCCGGGGGTCCGGGTCCCCAGCAACAGCCACAACC...CTCCACCCACGCTGCTCCCCAACCTGGAGTGGACCTTCCCACTGGGCCGATGAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS-3UTR GCA 90 bp | GGCCCAGTGGGAAGGTCCACTCCAGGTTGGGGAGCAGCGTGGGTGGAGGCAACATCGAAGTCCTGCTGCTaGTGCTGCAGGAGCCCGCTC | + |
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Preference number: 4 (lower is better) Translates to: GPVGRSTPGWGAAWVEATSKSCC*CCRSPL Trigger: GAGCGGGCTCCTGCAGCAGCAGCAGCAGGACTTCGA...TGTTGCCTCCACCCACGCTGCTCCCCAACCTGGAGTGGACCTTCCCACTGGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS-3UTR CCA 90 bp | CGGCCCAGTGGGAAGGTCCACTCCAGGTTGGGGAGCAGCGTGGGTGGAGGCAACTGGCTGCACTGCATCTaGCTTTGTGGCTGTGGGTAC | + |
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Preference number: 4 (lower is better) Translates to: RPSGKVHSRLGSSVGGGNWLHCI*LCGCGY Trigger: GTACCCACAGCCACAAAGCCAGATGCAGTGCAGCCA...GTTGCCTCCACCCACGCTGCTCCCCAACCTGGAGTGGACCTTCCCACTGGGCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS-3UTR TCA 90 bp | TGGGTGGAGGCAACAGTGGTGTGGTGGTGGTGGGGTTTGAGGTCTGTGCTGTCTGGCAGAACCCGGGCCTaGCACACCAGACGCAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: WVEATVVWWWWGLRSVLSGRTRA*HTRRRG Trigger: TCCTCTGCGTCTGGTGTGTCAGGCCCGGGTTCTGCC...AGACAGCACAGACCTCAAACCCCACCACCACCACACCACTGTTGCCTCCACCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS-3UTR TCA 90 bp | AGAGTCCCCAGAACAGAGGTAATCATCGGCCCAGTGGGAAGGTCCACTCCAGGTGCTGTCACAGCTCTGTaGAAGGCACTCGTGGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: RVPRTEVIIGPVGRSTPGAVTAL*KALVGQ Trigger: CTGGCCCACGAGTGCCTTTCACAGAGCTGTGACAGC...ACCTGGAGTGGACCTTCCCACTGGGCCGATGATTACCTCTGTTCTGGGGACTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS-3UTR GCA 90 bp | ACGGACAAATCAGCAACAGGAACCACCTGTTTTGCCTCAGGCCATACTTCATTCCGCAGAGGAAACCGCTaGAGCCTGTGGCTGGGGCGC | + |
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Preference number: 4 (lower is better) Translates to: TDKSATGTTCFASGHTSFRRGNR*SLWLGR Trigger: GCGCCCCAGCCACAGGCTGCAGCGGTTTCCTCTGCG...GAATGAAGTATGGCCTGAGGCAAAACAGGTGGTTCCTGTTGCTGATTTGTCCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS-3UTR CCA 90 bp | GCATTACTGTGGCACGGACAAATCAGCAACAGGAACCACCTGTTTTGCCTCAGGCAACTGGGTCGGTTGTaGCTGTTGCTGGGGACCCGG | + |
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Preference number: 4 (lower is better) Translates to: ALLWHGQISNRNHLFCLRQLGRL*LLLGTR Trigger: CCGGGTCCCCAGCAACAGCCACAACCGACCCAGTTG...CCTGAGGCAAAACAGGTGGTTCCTGTTGCTGATTTGTCCGTGCCACAGTAATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS-3UTR CCA 90 bp | TGGGTGGAGGCAACAGTGGTGTGGTGGTGGTGGGGTTTGAGGTCTGTGCTGTCTGTGTTGGAGAGTGTTTaGCGCTGTCACAGCTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: WVEATVVWWWWGLRSVLSVLESV*RCHSSV Trigger: CACAGAGCTGTGACAGCGCCAAACACTCTCCAACAC...AGACAGCACAGACCTCAAACCCCACCACCACCACACCACTGTTGCCTCCACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS-3UTR CCA 90 bp | AGTCAGAGTCCCCAGAACAGAGGTAATCATCGGCCCAGTGGGAAGGTCCACTCCTTGGCACAGGTGATCTaGGCTTTGATGACAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: SQSPQNRGNHRPSGKVHSLAQVI*ALMTAR Trigger: CCTGGCTGTCATCAAAGCCCAGATCACCTGTGCCAA...GGAGTGGACCTTCCCACTGGGCCGATGATTACCTCTGTTCTGGGGACTCTGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS-3UTR GCA 90 bp | AATCAGCAACAGGAACCACCTGTTTTGCCTCAGGCCATACTTCATTCTCTGCCCACAGGATCGAAGTCCTaGTGCTGCTGCTGCAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: NQQQEPPVLPQAILHSLPTGSKS*CCCCRS Trigger: GCTCCTGCAGCAGCAGCAGCAGGACTTCGATCCTGT...GGGCAGAGAATGAAGTATGGCCTGAGGCAAAACAGGTGGTTCCTGTTGCTGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS-3UTR GCA 90 bp | GCATTACTGTGGCACGGACAAATCAGCAACAGGAACCACCTGTTTTGCCTCAGGGGCAGACTGTCTGGCTaGACTGCATCTGGCTTTGTG | + |
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Preference number: 4 (lower is better) Translates to: ALLWHGQISNRNHLFCLRGRLSG*TASGFV Trigger: CACAAAGCCAGATGCAGTGCAGCCAGACAGTCTGCC...CCTGAGGCAAAACAGGTGGTTCCTGTTGCTGATTTGTCCGTGCCACAGTAATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS-3UTR TCA 90 bp | GCATTACTGTGGCACGGACAAATCAGCAACAGGAACCACCTGTTTTGCCTCAGGTCCAGCAGGGCAGTATaGATGTCTTTGGCACAGGTG | + |
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Preference number: 4 (lower is better) Translates to: ALLWHGQISNRNHLFCLRSSRAV*MSLAQV Trigger: CACCTGTGCCAAAGACATTCATACTGCCCTGCTGGA...CCTGAGGCAAAACAGGTGGTTCCTGTTGCTGATTTGTCCGTGCCACAGTAATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS-3UTR GCA 90 bp | GTAACCCAGGCATTTTGGTTCCTCTTGTATAATACGATCCCAGTTAGGTGTTGGAAGTCCTGCTGCTGCTaGTGCAGGAGCCCGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: VTQAFWFLLYNTIPVRCWKSCCC*CRSPLW Trigger: CCAGAGCGGGCTCCTGCAGCAGCAGCAGCAGGACTT...CCAACACCTAACTGGGATCGTATTATACAAGAGGAACCAAAATGCCTGGGTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS-3UTR GCA 90 bp | ACGGACAAATCAGCAACAGGAACCACCTGTTTTGCCTCAGGCCATACTTCATTCCACTTGTCAAAGCGCTaGAAGGGTGCGTCACTGCTC | + |
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Preference number: 4 (lower is better) Translates to: TDKSATGTTCFASGHTSFHLSKR*KGASLL Trigger: GAGCAGTGACGCACCCTTGCAGCGCTTTGACAAGTG...GAATGAAGTATGGCCTGAGGCAAAACAGGTGGTTCCTGTTGCTGATTTGTCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS-3UTR CCA 90 bp | CCCCTGCTGGTTTCAGCTGCATTACTGTGGCACGGACAAATCAGCAACAGGAACACCTTCATCAAAGTCTaGAGACTCTCCTTCAGTTGC | + |
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Preference number: 4 (lower is better) Translates to: PLLVSAALLWHGQISNRNTFIKV*RLSFSC Trigger: GCAACTGAAGGAGAGTCTCCAGACTTTGATGAAGGT...GTTCCTGTTGCTGATTTGTCCGTGCCACAGTAATGCAGCTGAAACCAGCAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS-3UTR CCA 90 bp | TTTGGTTCCTCTTGTATAATACGATCCCAGTTAGGTGTTGGGGGCAACAAAAGGGACAGCCAGGTACTGTaGGTAGGGCAGACTGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: FGSSCIIRSQLGVGGNKRDSQVL*VGQTVW Trigger: CCAGACAGTCTGCCCTACCCACAGTACCTGGCTGTC...CCTTTTGTTGCCCCCAACACCTAACTGGGATCGTATTATACAAGAGGAACCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS-3UTR CCA 90 bp | AGGCATTTTGGTTCCTCTTGTATAATACGATCCCAGTTAGGTGTTGGGGGCAACCTGGCTTTGTGGCTGTaGGTACCAGTGTTGGAGAGT | + |
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Preference number: 4 (lower is better) Translates to: RHFGSSCIIRSQLGVGGNLALWL*VPVLES Trigger: ACTCTCCAACACTGGTACCCACAGCCACAAAGCCAG...GTTGCCCCCAACACCTAACTGGGATCGTATTATACAAGAGGAACCAAAATGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS-3UTR GCA 90 bp | TTTGGTTCCTCTTGTATAATACGATCCCAGTTAGGTGTTGGGGGCAACAAAAGGAGGGCCAGTAGAGGGTaGAGTAGTCTTTCCAGTGAC | + |
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Preference number: 4 (lower is better) Translates to: FGSSCIIRSQLGVGGNKRRASRG*SSLSSD Trigger: GTCACTGGAAAGACTACTGCACCCTCTACTGGCCCT...CCTTTTGTTGCCCCCAACACCTAACTGGGATCGTATTATACAAGAGGAACCAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS-3UTR TCA 90 bp | AATCAGCAACAGGAACCACCTGTTTTGCCTCAGGCCATACTTCATTCTCTGCCCTCAATGTTAGTGTTCTaGATCAGATTCTGGGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: NQQQEPPVLPQAILHSLPSMLVF*IRFWAA Trigger: TGCAGCCCAGAATCTGATTCAGAACACTAACATTGA...GGGCAGAGAATGAAGTATGGCCTGAGGCAAAACAGGTGGTTCCTGTTGCTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS-3UTR GCA 90 bp | ATGGCAGGACTGGAAAAAGGTGGGTTAAAAGGAAATCCATACACTGGGACAGACAATCAGATTCTGGGCTaGAACCTTCATCAAAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: MAGLEKGGLKGNPYTGTDNQILG*NLHQSL Trigger: CAGACTTTGATGAAGGTTGCAGCCCAGAATCTGATT...GTCTGTCCCAGTGTATGGATTTCCTTTTAACCCACCTTTTTCCAGTCCTGCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS GCA 90 bp | AGCCCGCTCTGGGCAGAACCCACCAACTGGGTCGGTTGTGGCTGTTaGTGGGGACCCGGACCCCCGGCAGAACCCGGGCCTGACACACCA | + |
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Preference number: 5 (lower is better) Translates to: SPLWAEPTNWVGCGC*WGPGPPAEPGPDTP Trigger: TGGTGTGTCAGGCCCGGGTTCTGCCGGGGGTCCGGGTCCCCAGCAACAGCCACAACCGACCCAGTTGGTGGGTTCTGCCCAGAGCGGGCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS CCA 90 bp | CCGCTCTGGGCAGAACCCACCAACTGGGTCGGTTGTGGCTGTTGCTaGGGACCCGGACCCCCGGCAGAACCCGGGCCTGACACACCAGAC | + |
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Preference number: 5 (lower is better) Translates to: PLWAEPTNWVGCGCC*GPGPPAEPGPDTPD Trigger: GTCTGGTGTGTCAGGCCCGGGTTCTGCCGGGGGTCCGGGTCCCCAGCAACAGCCACAACCGACCCAGTTGGTGGGTTCTGCCCAGAGCGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS CCA 90 bp | TGCTGCTGCTGCTGCAGGAGCCCGCTCTGGGCAGAACCCACCAACTaGGTCGGTTGTGGCTGTTGCTGGGGACCCGGACCCCCGGCAGAA | + |
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Preference number: 5 (lower is better) Translates to: CCCCCRSPLWAEPTN*VGCGCCWGPGPPAE Trigger: TTCTGCCGGGGGTCCGGGTCCCCAGCAACAGCCACAACCGACCCAGTTGGTGGGTTCTGCCCAGAGCGGGCTCCTGCAGCAGCAGCAGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS-3UTR CAA 90 bp | CGGCCCAGTGGGAAGGTCCACTCCAGGTTGGGGAGCAGCGTGGGTGGAGGCAACGTCTTTCCAGTGACCTaGTTGGCACAGTCCAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: RPSGKVHSRLGSSVGGGNVFPVT*LAQSSR Trigger: CCTGCTGGACTGTGCCAACAAGGTCACTGGAAAGAC...GTTGCCTCCACCCACGCTGCTCCCCAACCTGGAGTGGACCTTCCCACTGGGCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS-3UTR CAA 90 bp | CGGCCCAGTGGGAAGGTCCACTCCAGGTTGGGGAGCAGCGTGGGTGGAGGCAACAACTCCTCCAAACACTaGTCAAAGCGCTGCAAGGGT | + |
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Preference number: 5 (lower is better) Translates to: RPSGKVHSRLGSSVGGGNNSSKH*SKRCKG Trigger: ACCCTTGCAGCGCTTTGACAAGTGTTTGGAGGAGTT...GTTGCCTCCACCCACGCTGCTCCCCAACCTGGAGTGGACCTTCCCACTGGGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS-3UTR CAA 90 bp | GCATTACTGTGGCACGGACAAATCAGCAACAGGAACCACCTGTTTTGCCTCAGGGGTCGGTTGTGGCTGTaGCTGGGGACCCGGACCCCC | + |
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Preference number: 5 (lower is better) Translates to: ALLWHGQISNRNHLFCLRGRLWL*LGTRTP Trigger: GGGGGTCCGGGTCCCCAGCAACAGCCACAACCGACC...CCTGAGGCAAAACAGGTGGTTCCTGTTGCTGATTTGTCCGTGCCACAGTAATGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS-3UTR CAA 90 bp | AGAGTCCCCAGAACAGAGGTAATCATCGGCCCAGTGGGAAGGTCCACTCCAGGTCACCAACTGGGTCGGTaGTGGCTGTTGCTGGGGACC | + |
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Preference number: 5 (lower is better) Translates to: RVPRTEVIIGPVGRSTPGHQLGR*WLLLGT Trigger: GGTCCCCAGCAACAGCCACAACCGACCCAGTTGGTG...ACCTGGAGTGGACCTTCCCACTGGGCCGATGATTACCTCTGTTCTGGGGACTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS TCA 90 bp | TGTGGGTACCAGTGTTGGAGAGTGTTTGGCGCTGTCACAGCTCTGTaGAAGGCACTCGTGGGCCAGGCGCAAGCAGAGTTCCAGCTGATC | + |
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Preference number: 5 (lower is better) Translates to: CGYQCWRVFGAVTAL*KALVGQAQAEFQLI Trigger: GATCAGCTGGAACTCTGCTTGCGCCTGGCCCACGAGTGCCTTTCACAGAGCTGTGACAGCGCCAAACACTCTCCAACACTGGTACCCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS CCA 90 bp | GGTAGGGCAGACTGTCTGGCTGCACTGCATCTGGCTTTGTGGCTGTaGGTACCAGTGTTGGAGAGTGTTTGGCGCTGTCACAGCTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: GRADCLAALHLALWL*VPVLESVWRCHSSV Trigger: CACAGAGCTGTGACAGCGCCAAACACTCTCCAACACTGGTACCCACAGCCACAAAGCCAGATGCAGTGCAGCCAGACAGTCTGCCCTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS CCA 90 bp | ACTGTGGGTAGGGCAGACTGTCTGGCTGCACTGCATCTGGCTTTGTaGCTGTGGGTACCAGTGTTGGAGAGTGTTTGGCGCTGTCACAGC | + |
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Preference number: 5 (lower is better) Translates to: TVGRADCLAALHLAL*LWVPVLESVWRCHS Trigger: GCTGTGACAGCGCCAAACACTCTCCAACACTGGTACCCACAGCCACAAAGCCAGATGCAGTGCAGCCAGACAGTCTGCCCTACCCACAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS GCA 90 bp | GCACTCGTGGGCCAGGCGCAAGCAGAGTTCCAGCTGATCACAGAGTaGGTAAAACTCCTCCAAACACTTGTCAAAGCGCTGCAAGGGTGC | + |
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Preference number: 5 (lower is better) Translates to: ALVGQAQAEFQLITE*VKLLQTLVKALQGC Trigger: GCACCCTTGCAGCGCTTTGACAAGTGTTTGGAGGAGTTTTACGCACTCTGTGATCAGCTGGAACTCTGCTTGCGCCTGGCCCACGAGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS CCA 90 bp | GTCTTTGGCACAGGTGATCTGGGCTTTGATGACAGCCAGGTACTGTaGGTAGGGCAGACTGTCTGGCTGCACTGCATCTGGCTTTGTGGC | + |
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Preference number: 5 (lower is better) Translates to: VFGTGDLGFDDSQVL*VGQTVWLHCIWLCG Trigger: GCCACAAAGCCAGATGCAGTGCAGCCAGACAGTCTGCCCTACCCACAGTACCTGGCTGTCATCAAAGCCCAGATCACCTGTGCCAAAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS-3UTR CAA 90 bp | ATCAGCAACAGGAACCACCTGTTTTGCCTCAGGCCATACTTCATTCTCTGCCCCGCACTGCATCTGGCTTaGTGGCTGTGGGTACCAGTG | + |
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Preference number: 5 (lower is better) Translates to: ISNRNHLFCLRPYFILCPALHLA*WLWVPV Trigger: CACTGGTACCCACAGCCACAAAGCCAGATGCAGTGC...GGGGCAGAGAATGAAGTATGGCCTGAGGCAAAACAGGTGGTTCCTGTTGCTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS TCA 90 bp | CTGCAACCTTCATCAAAGTCTGGAGACTCTCCTTCAGTTGCGGGATaGGCATCTTGTAGCGCTGCACAGGATCGAAGTCCTGCTGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: LQPSSKSGDSPSVAG*ASCSAAQDRSPAAA Trigger: AGCAGCAGCAGGACTTCGATCCTGTGCAGCGCTACAAGATGCTCATCCCGCAACTGAAGGAGAGTCTCCAGACTTTGATGAAGGTTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS TCA 90 bp | GTAGTCTTTCCAGTGACCTTGTTGGCACAGTCCAGCAGGGCAGTATaGATGTCTTTGGCACAGGTGATCTGGGCTTTGATGACAGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: VVFPVTLLAQSSRAV*MSLAQVIWALMTAR Trigger: CCTGGCTGTCATCAAAGCCCAGATCACCTGTGCCAAAGACATTCATACTGCCCTGCTGGACTGTGCCAACAAGGTCACTGGAAAGACTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS-3UTR CAA 90 bp | ATCAGCAACAGGAACCACCTGTTTTGCCTCAGGCCATACTTCATTCTCTGCCCCAGTGTTGGAGAGTGTTaGGCGCTGTCACAGCTCTGT | + |
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Preference number: 5 (lower is better) Translates to: ISNRNHLFCLRPYFILCPSVGEC*ALSQLC Trigger: ACAGAGCTGTGACAGCGCCAAACACTCTCCAACACT...GGGGCAGAGAATGAAGTATGGCCTGAGGCAAAACAGGTGGTTCCTGTTGCTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS-3UTR CAA 90 bp | ATGGCAGGACTGGAAAAAGGTGGGTTAAAAGGAAATCCATACACTGGGACAGACCAGGTGATCTGGGCTTaGATGACAGCCAGGTACTGT | + |
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Preference number: 5 (lower is better) Translates to: MAGLEKGGLKGNPYTGTDQVIWA*MTARYC Trigger: ACAGTACCTGGCTGTCATCAAAGCCCAGATCACCTG...GTCTGTCCCAGTGTATGGATTTCCTTTTAACCCACCTTTTTCCAGTCCTGCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS TCA 90 bp | AAGGGTGCGTCACTGCTCTTCTGTCCATTGTCAATGTTAGTGTTCTaGATCAGATTCTGGGCTGCAACCTTCATCAAAGTCTGGAGACTC | + |
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Preference number: 5 (lower is better) Translates to: KGASLLFCPLSMLVF*IRFWAATFIKVWRL Trigger: GAGTCTCCAGACTTTGATGAAGGTTGCAGCCCAGAATCTGATTCAGAACACTAACATTGACAATGGACAGAAGAGCAGTGACGCACCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS CAA 90 bp | CTGCTGCAGGAGCCCGCTCTGGGCAGAACCCACCAACTGGGTCGGTaGTGGCTGTTGCTGGGGACCCGGACCCCCGGCAGAACCCGGGCC | + |
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Preference number: 6 (lower is better) Translates to: LLQEPALGRTHQLGR*WLLLGTRTPGRTRA Trigger: GGCCCGGGTTCTGCCGGGGGTCCGGGTCCCCAGCAACAGCCACAACCGACCCAGTTGGTGGGTTCTGCCCAGAGCGGGCTCCTGCAGCAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS CAA 72 bp | CTGGGCAGAACCCACCAACTGGGTCGGTTGTGGCTGTaGCTGGGGACCCGGACCCCCGGCAGAACCCGGGCC | + |
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Preference number: 6 (lower is better) Translates to: LGRTHQLGRLWL*LGTRTPGRTRA Trigger: GGCCCGGGTTCTGCCGGGGGTCCGGGTCCCCAGCAACAGCCACAACCGACCCAGTTGGTGGGTTCTGCCCAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS GCA 72 bp | TGGGCAGAACCCACCAACTGGGTCGGTTGTGGCTGTTaGTGGGGACCCGGACCCCCGGCAGAACCCGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: WAEPTNWVGCGC*WGPGPPAEPGP Trigger: AGGCCCGGGTTCTGCCGGGGGTCCGGGTCCCCAGCAACAGCCACAACCGACCCAGTTGGTGGGTTCTGCCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS CCA 72 bp | GCAGAACCCACCAACTGGGTCGGTTGTGGCTGTTGCTaGGGACCCGGACCCCCGGCAGAACCCGGGCCTGAC | + |
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Preference number: 6 (lower is better) Translates to: AEPTNWVGCGCC*GPGPPAEPGPD Trigger: GTCAGGCCCGGGTTCTGCCGGGGGTCCGGGTCCCCAGCAACAGCCACAACCGACCCAGTTGGTGGGTTCTGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS CAA 72 bp | GAGCCCGCTCTGGGCAGAACCCACCAACTGGGTCGGTaGTGGCTGTTGCTGGGGACCCGGACCCCCGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: EPALGRTHQLGR*WLLLGTRTPGR Trigger: TCTGCCGGGGGTCCGGGTCCCCAGCAACAGCCACAACCGACCCAGTTGGTGGGTTCTGCCCAGAGCGGGCTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS CCA 72 bp | TGCTGCAGGAGCCCGCTCTGGGCAGAACCCACCAACTaGGTCGGTTGTGGCTGTTGCTGGGGACCCGGACCC | + |
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Preference number: 6 (lower is better) Translates to: CCRSPLWAEPTN*VGCGCCWGPGP Trigger: GGGTCCGGGTCCCCAGCAACAGCCACAACCGACCCAGTTGGTGGGTTCTGCCCAGAGCGGGCTCCTGCAGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS CAA 90 bp | GGTACTGTGGGTAGGGCAGACTGTCTGGCTGCACTGCATCTGGCTTaGTGGCTGTGGGTACCAGTGTTGGAGAGTGTTTGGCGCTGTCAC | + |
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Preference number: 6 (lower is better) Translates to: GTVGRADCLAALHLA*WLWVPVLESVWRCH Trigger: GTGACAGCGCCAAACACTCTCCAACACTGGTACCCACAGCCACAAAGCCAGATGCAGTGCAGCCAGACAGTCTGCCCTACCCACAGTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS CCA 72 bp | AGGGCAGACTGTCTGGCTGCACTGCATCTGGCTTTGTaGCTGTGGGTACCAGTGTTGGAGAGTGTTTGGCGC | + |
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Preference number: 6 (lower is better) Translates to: RADCLAALHLAL*LWVPVLESVWR Trigger: GCGCCAAACACTCTCCAACACTGGTACCCACAGCCACAAAGCCAGATGCAGTGCAGCCAGACAGTCTGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS CCA 72 bp | GATGACAGCCAGGTACTGTGGGTAGGGCAGACTGTCTaGCTGCACTGCATCTGGCTTTGTGGCTGTGGGTAC | + |
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Preference number: 6 (lower is better) Translates to: DDSQVLWVGQTV*LHCIWLCGCGY Trigger: GTACCCACAGCCACAAAGCCAGATGCAGTGCAGCCAGACAGTCTGCCCTACCCACAGTACCTGGCTGTCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS CCA 72 bp | GACTGTCTGGCTGCACTGCATCTGGCTTTGTGGCTGTaGGTACCAGTGTTGGAGAGTGTTTGGCGCTGTCAC | + |
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Preference number: 6 (lower is better) Translates to: DCLAALHLALWL*VPVLESVWRCH Trigger: GTGACAGCGCCAAACACTCTCCAACACTGGTACCCACAGCCACAAAGCCAGATGCAGTGCAGCCAGACAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS CAA 72 bp | GGTAGGGCAGACTGTCTGGCTGCACTGCATCTGGCTTaGTGGCTGTGGGTACCAGTGTTGGAGAGTGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: GRADCLAALHLA*WLWVPVLESVW Trigger: CCAAACACTCTCCAACACTGGTACCCACAGCCACAAAGCCAGATGCAGTGCAGCCAGACAGTCTGCCCTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS CAA 90 bp | TGTCTGGCTGCACTGCATCTGGCTTTGTGGCTGTGGGTACCAGTGTaGGAGAGTGTTTGGCGCTGTCACAGCTCTGTGAAAGGCACTCGT | + |
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Preference number: 6 (lower is better) Translates to: CLAALHLALWLWVPV*ESVWRCHSSVKGTR Trigger: ACGAGTGCCTTTCACAGAGCTGTGACAGCGCCAAACACTCTCCAACACTGGTACCCACAGCCACAAAGCCAGATGCAGTGCAGCCAGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS GCA 72 bp | GGCCAGGCGCAAGCAGAGTTCCAGCTGATCACAGAGTaGGTAAAACTCCTCCAAACACTTGTCAAAGCGCTG | + |
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Preference number: 6 (lower is better) Translates to: GQAQAEFQLITE*VKLLQTLVKAL Trigger: CAGCGCTTTGACAAGTGTTTGGAGGAGTTTTACGCACTCTGTGATCAGCTGGAACTCTGCTTGCGCCTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS CAA 72 bp | GCACTGCATCTGGCTTTGTGGCTGTGGGTACCAGTGTaGGAGAGTGTTTGGCGCTGTCACAGCTCTGTGAAA | + |
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Preference number: 6 (lower is better) Translates to: ALHLALWLWVPV*ESVWRCHSSVK Trigger: TTTCACAGAGCTGTGACAGCGCCAAACACTCTCCAACACTGGTACCCACAGCCACAAAGCCAGATGCAGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS TCA 72 bp | CCAGTGACCTTGTTGGCACAGTCCAGCAGGGCAGTATaGATGTCTTTGGCACAGGTGATCTGGGCTTTGATG | + |
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Preference number: 6 (lower is better) Translates to: PVTLLAQSSRAV*MSLAQVIWALM Trigger: CATCAAAGCCCAGATCACCTGTGCCAAAGACATTCATACTGCCCTGCTGGACTGTGCCAACAAGGTCACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS CAA 90 bp | ATTCTGGGCTGCAACCTTCATCAAAGTCTGGAGACTCTCCTTCAGTaGCGGGATGAGCATCTTGTAGCGCTGCACAGGATCGAAGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: ILGCNLHQSLETLLQ*RDEHLVALHRIEVL Trigger: CAGGACTTCGATCCTGTGCAGCGCTACAAGATGCTCATCCCGCAACTGAAGGAGAGTCTCCAGACTTTGATGAAGGTTGCAGCCCAGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS TCA 72 bp | TCATCAAAGTCTGGAGACTCTCCTTCAGTTGCGGGATaGGCATCTTGTAGCGCTGCACAGGATCGAAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: SSKSGDSPSVAG*ASCSAAQDRSP Trigger: AGGACTTCGATCCTGTGCAGCGCTACAAGATGCTCATCCCGCAACTGAAGGAGAGTCTCCAGACTTTGATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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| CDS CAA 72 bp | TGCAACCTTCATCAAAGTCTGGAGACTCTCCTTCAGTaGCGGGATGAGCATCTTGTAGCGCTGCACAGGATC | + |
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Preference number: 6 (lower is better) Translates to: CNLHQSLETLLQ*RDEHLVALHRI Trigger: GATCCTGTGCAGCGCTACAAGATGCTCATCCCGCAACTGAAGGAGAGTCTCCAGACTTTGATGAAGGTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003536.9 |
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