RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MED25 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000002968

Ensembl transcript IDs: ENSMUST00000003049.8, ENSMUST00000207278.2, ENSMUST00000207490.2, ENSMUST00000207654.2, ENSMUST00000207788.2, ENSMUST00000207848.3, ENSMUST00000208253.2, ENSMUST00000208551.2, ENSMUST00000208556.2, ENSMUST00000209191.2

Found 280 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCAGCACGAGCCCACGCACAAGCACCATGTGCCTGGGGTCCTGGCTaGCGTCTGCTGGTTGCTGCAAAGGCTCCAGTAGGGCAGGAGGAG +
Preference number: 1 (lower is better)
Translates to: AARAHAQAPCAWGPG*RLLVAAKAPVGQEE
Trigger: CTCCTCCTGCCCTACTGGAGCCTTTGCAGCAACCAGCAGACGTCAGCCAGGACCCCAGGCACATGGTGCTTGTGCGTGGGCTCGTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208556.2
3UTR GCA 90 bp GAGCTGCCACCAACAGGCAGCACGAGCCCACGCACAAGCACCATGTaGCTGGGGTCCTGGCTGACGTCTGCTGGTTGCTGCAAAGGCTCC +
Preference number: 1 (lower is better)
Translates to: ELPPTGSTSPRTSTM*LGSWLTSAGCCKGS
Trigger: GGAGCCTTTGCAGCAACCAGCAGACGTCAGCCAGGACCCCAGGCACATGGTGCTTGTGCGTGGGCTCGTGCTGCCTGTTGGTGGCAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208556.2
3UTR CCA 90 bp ACAGGCAGCACGAGCCCACGCACAAGCACCATGTGCCTGGGGTCCTaGCTGACGTCTGCTGGTTGCTGCAAAGGCTCCAGTAGGGCAGGA +
Preference number: 1 (lower is better)
Translates to: TGSTSPRTSTMCLGS*LTSAGCCKGSSRAG
Trigger: TCCTGCCCTACTGGAGCCTTTGCAGCAACCAGCAGACGTCAGCCAGGACCCCAGGCACATGGTGCTTGTGCGTGGGCTCGTGCTGCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208556.2
3UTR GCA 90 bp CGCACAAGCACCATGTGCCTGGGGTCCTGGCTGACGTCTGCTGGTTaGTGCAAAGGCTCCAGTAGGGCAGGAGGAGCCGCCTTCTCAAAC +
Preference number: 1 (lower is better)
Translates to: RTSTMCLGSWLTSAG*CKGSSRAGGAAFSN
Trigger: GTTTGAGAAGGCGGCTCCTCCTGCCCTACTGGAGCCTTTGCAGCAACCAGCAGACGTCAGCCAGGACCCCAGGCACATGGTGCTTGTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208556.2
3UTR GCA 90 bp CCACTCAGGACACTGCTGGGCAGAGGCAAAGGAACCTTGCCATCTTaGAGAATTGCAAGCACCCTGTCGCACTGCCAACTCGGACCGGGG +
Preference number: 1 (lower is better)
Translates to: PLRTLLGRGKGTLPS*RIASTLSHCQLGPG
Trigger: CCCCGGTCCGAGTTGGCAGTGCGACAGGGTGCTTGCAATTCTGCAAGATGGCAAGGTTCCTTTGCCTCTGCCCAGCAGTGTCCTGAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR GCA 90 bp ACAAGCACCATGTGCCTGGGGTCCTGGCTGACGTCTGCTGGTTGCTaGAAAGGCTCCAGTAGGGCAGGAGGAGCCGCCTTCTCAAACAGA +
Preference number: 1 (lower is better)
Translates to: TSTMCLGSWLTSAGC*KGSSRAGGAAFSNR
Trigger: TCTGTTTGAGAAGGCGGCTCCTCCTGCCCTACTGGAGCCTTTGCAGCAACCAGCAGACGTCAGCCAGGACCCCAGGCACATGGTGCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208556.2
3UTR CCA 90 bp TCCCTGGGGCCACTGAGGACCCTGGGCCTCTCATCCCACTTCCTCTaGGAACCCAAGGCAGTAAGGTTTCTAGGAAGCTCCATGGAACGC +
Preference number: 1 (lower is better)
Translates to: SLGPLRTLGLSSHFL*EPKAVRFLGSSMER
Trigger: GCGTTCCATGGAGCTTCCTAGAAACCTTACTGCCTTGGGTTCCCAGAGGAAGTGGGATGAGAGGCCCAGGGTCCTCAGTGGCCCCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
3UTR GCA 90 bp GTGTGGGTGACTGGTCCTGGCCGCCTCTCATTTCCAGAAACAAGCTaGACCAAAGGCAGGCAGTCCCACTGTTCCTCGCAAAGGCATGCG +
Preference number: 1 (lower is better)
Translates to: VWVTGPGRLSFPETS*TKGRQSHCSSQRHA
Trigger: CGCATGCCTTTGCGAGGAACAGTGGGACTGCCTGCCTTTGGTGCAGCTTGTTTCTGGAAATGAGAGGCGGCCAGGACCAGTCACCCACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR TCA 90 bp GAGTATGGCCCTCAGGGGACTTGGTCTTGGGTCTCACAGTGTGGGTaGCTGGTCCTGGCCGCCTCTCATTTCCAGAAACAAGCTGCACCA +
Preference number: 1 (lower is better)
Translates to: EYGPQGTWSWVSQCG*LVLAASHFQKQAAP
Trigger: TGGTGCAGCTTGTTTCTGGAAATGAGAGGCGGCCAGGACCAGTCACCCACACTGTGAGACCCAAGACCAAGTCCCCTGAGGGCCATACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR GCA 90 bp TGCATGCACAGGAGCAAGTCACTTCAAAGTCAGGGGCTGGCTTGGTaGCACCTCACAGACTGCCTCGGTTGCATGGATATTGCCGCCACC +
Preference number: 1 (lower is better)
Translates to: CMHRSKSLQSQGLAW*HLTDCLGCMDIAAT
Trigger: GGTGGCGGCAATATCCATGCAACCGAGGCAGTCTGTGAGGTGGCACCAAGCCAGCCCCTGACTTTGAAGTGACTTGCTCCTGTGCATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR GCA 90 bp AGGAAGCTCCATGGAACGCCAGAAGTCCTTCTAAGCCCCGCTGAATaGAGACACTTTCCTTTGACCCTTCGGGAGCCCTTCCCCCACACG +
Preference number: 1 (lower is better)
Translates to: RKLHGTPEVLLSPAE*RHFPLTLREPFPHT
Trigger: CGTGTGGGGGAAGGGCTCCCGAAGGGTCAAAGGAAAGTGTCTGCATTCAGCGGGGCTTAGAAGGACTTCTGGCGTTCCATGGAGCTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
3UTR GCA 90 bp AAGCTGCACCAAAGGCAGGCAGTCCCACTGTTCCTCGCAAAGGCATaGGCCTGCCAGGACCACACCACAGTCATATACATTCAGGAGCTG +
Preference number: 1 (lower is better)
Translates to: KLHQRQAVPLFLAKA*ACQDHTTVIYIQEL
Trigger: CAGCTCCTGAATGTATATGACTGTGGTGTGGTCCTGGCAGGCGCATGCCTTTGCGAGGAACAGTGGGACTGCCTGCCTTTGGTGCAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR CCA 90 bp GTTTGCATGCACAGGAGCAAGTCACTTCAAAGTCAGGGGCTGGCTTaGTGCCACCTCACAGACTGCCTCGGTTGCATGGATATTGCCGCC +
Preference number: 1 (lower is better)
Translates to: VCMHRSKSLQSQGLA*CHLTDCLGCMDIAA
Trigger: GGCGGCAATATCCATGCAACCGAGGCAGTCTGTGAGGTGGCACCAAGCCAGCCCCTGACTTTGAAGTGACTTGCTCCTGTGCATGCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR GCA 90 bp TCCTGGTTACTGAGACTAGGACCTGACCTGGGTCCTTGCAAACAGTaGCACTTGGGATCGAGGTATGGAACAGCCCCCATGATGGACAGC +
Preference number: 1 (lower is better)
Translates to: SWLLRLGPDLGPCKQ*HLGSRYGTAPMMDS
Trigger: GCTGTCCATCATGGGGGCTGTTCCATACCTCGATCCCAAGTGGCACTGTTTGCAAGGACCCAGGTCAGGTCCTAGTCTCAGTAACCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR CCA 90 bp GTCAGGGGCTGGCTTGGTGCCACCTCACAGACTGCCTCGGTTGCATaGATATTGCCGCCACCACCACCAATAAATAAAGCTAGCCATGTG +
Preference number: 1 (lower is better)
Translates to: VRGWLGATSQTASVA*ILPPPPPINKASHV
Trigger: CACATGGCTAGCTTTATTTATTGGTGGTGGTGGCGGCAATATCCATGCAACCGAGGCAGTCTGTGAGGTGGCACCAAGCCAGCCCCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR CCA 90 bp TCTCAAACAGAAGCCGGAGGGCTGGCAGCTTTCTCGGAGAAACGATaGAGAAGTGGATGCCTCGCTCTCCTATTTTCTGCACCAGGCTCT +
Preference number: 1 (lower is better)
Translates to: SQTEAGGLAAFSEKR*RSGCLALLFSAPGS
Trigger: AGAGCCTGGTGCAGAAAATAGGAGAGCGAGGCATCCACTTCTCCATCGTTTCTCCGAGAAAGCTGCCAGCCCTCCGGCTTCTGTTTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208556.2
3UTR GCA 90 bp CTCTCTTGTAATTTTCTTGTGCCTTTTGAGCGGAAGGTTGACACCTaGCCTTCTTCACCCAGATGTCGGTGCTGGCATTGGCTGGGACAG +
Preference number: 1 (lower is better)
Translates to: LSCNFLVPFERKVDT*PSSPRCRCWHWLGQ
Trigger: CTGTCCCAGCCAATGCCAGCACCGACATCTGGGTGAAGAAGGGCAGGTGTCAACCTTCCGCTCAAAAGGCACAAGAAAATTACAAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR GCA 90 bp GTCTGGCCAATCTGTTCACGCATCTTCTTAAAGTCATCGAACAGCTaGAGGGCAGTGCTCAGACCTTCAGCGATGAGACTACAGCTCTCG +
Preference number: 1 (lower is better)
Translates to: VWPICSRIFLKSSNS*RAVLRPSAMRLQLS
Trigger: CGAGAGCTGTAGTCTCATCGCTGAAGGTCTGAGCACTGCCCTGCAGCTGTTCGATGACTTTAAGAAGATGCGTGAACAGATTGGCCAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208556.2
3UTR TCA 90 bp TTTCTAACTGTCCTCCAGGGAACCAGGGCACGGCTCTGCACACTTTaGAATGAACCAAACATACCAGTTCAGATTTCCTGCATGTCCTGG +
Preference number: 1 (lower is better)
Translates to: FLTVLQGTRARLCTL*NEPNIPVQISCMSW
Trigger: CCAGGACATGCAGGAAATCTGAACTGGTATGTTTGGTTCATTTCAAAGTGTGCAGAGCCGTGCCCTGGTTCCCTGGAGGACAGTTAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR TCA 90 bp CCTGCCAGGACCACACCACAGTCATATACATTCAGGAGCTGTTCGTaGATATCCCTTCTGAGACAGATTCAGTGTTCACAAGGGTGGGAA +
Preference number: 1 (lower is better)
Translates to: PARTTPQSYTFRSCS*ISLLRQIQCSQGWE
Trigger: TTCCCACCCTTGTGAACACTGAATCTGTCTCAGAAGGGATATTCACGAACAGCTCCTGAATGTATATGACTGTGGTGTGGTCCTGGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR GCA 90 bp CATGATGGGACTGTAGTTGTGCTTATGAATTCTGATGTGTTTGCATaGACAGGAGCAAGTCACTTCAAAGTCAGGGGCTGGCTTGGTGCC +
Preference number: 1 (lower is better)
Translates to: HDGTVVVLMNSDVFA*TGASHFKVRGWLGA
Trigger: GGCACCAAGCCAGCCCCTGACTTTGAAGTGACTTGCTCCTGTGCATGCAAACACATCAGAATTCATAAGCACAACTACAGTCCCATCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR-3UTR GCA 90 bp CAGATGAGGTCCATGAGGATGTCGTCCTCCATGACGCTGGGCTGCAGGCCCGGCGCAGCGGGAAGGGACTaGATCTCCCAGTGGTCCCTG +
Preference number: 2 (lower is better)
Translates to: QMRSMRMSSSMTLGCRPGAAGRD*ISQWSL
Trigger: CAGGGACCACTGGGAGATGCAGTCCCTTCCCGCTGC...GCCGGGCCTGCAGCCCAGCGTCATGGAGGACGACATCCTCATGGACCTCATCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
3UTR-3UTR TCA 90 bp AGGGCAGGAGGAGCCGCCTTCTCAAACAGAAGCCGGAGGGCTGGCAGCTTTCTCCAGGAGGTACGGGGGTaGGTTGCAGATGAGGAGACA +
Preference number: 2 (lower is better)
Translates to: RAGGAAFSNRSRRAGSFLQEVRG*VADEET
Trigger: TGTCTCCTCATCTGCAACTCACCCCCGTACCTCCTG...GAGAAAGCTGCCAGCCCTCCGGCTTCTGTTTGAGAAGGCGGCTCCTCCTGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208556.2
3UTR-3UTR GCA 90 bp CTGCCCTTCTTCACCCAGATGTCGGTGCTGGCATTGGCTGGGACAGAGACGGCAGCAAAGGCATGCGCCTaGCAGGACCACACCACAGTC +
Preference number: 2 (lower is better)
Translates to: LPFFTQMSVLALAGTETAAKACA*QDHTTV
Trigger: GACTGTGGTGTGGTCCTGGCAGGCGCATGCCTTTGC...TGCCGTCTCTGTCCCAGCCAATGCCAGCACCGACATCTGGGTGAAGAAGGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR CAA 90 bp GCCACTCAGGACACTGCTGGGCAGAGGCAAAGGAACCTTGCCATCTaGCAGAATTGCAAGCACCCTGTCGCACTGCCAACTCGGACCGGG +
Preference number: 2 (lower is better)
Translates to: ATQDTAGQRQRNLAI*QNCKHPVALPTRTG
Trigger: CCCGGTCCGAGTTGGCAGTGCGACAGGGTGCTTGCAATTCTGCAAGATGGCAAGGTTCCTTTGCCTCTGCCCAGCAGTGTCCTGAGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR-3UTR CCA 90 bp CAGATGAGGTCCATGAGGATGTCGTCCTCCATGACGCTGGGCTGCAGGCCCGGCTCATCCCACTTCCTCTaGGAACCCAAGGCAGTAAGG +
Preference number: 2 (lower is better)
Translates to: QMRSMRMSSSMTLGCRPGSSHFL*EPKAVR
Trigger: CCTTACTGCCTTGGGTTCCCAGAGGAAGTGGGATGA...GCCGGGCCTGCAGCCCAGCGTCATGGAGGACGACATCCTCATGGACCTCATCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
3UTR-3UTR GCA 90 bp CCTTTTGAGCGGAAGGTTGACACCTGCCCTTCTTCACCCAGATGTCGGTGCTGGGGCCTCACTCTTGTGTaGTTCAGCCTGCAGACGCTT +
Preference number: 2 (lower is better)
Translates to: PFERKVDTCPSSPRCRCWGLTLV*FSLQTL
Trigger: AAGCGTCTGCAGGCTGAAGCACACAAGAGTGAGGCC...CCAGCACCGACATCTGGGTGAAGAAGGGCAGGTGTCAACCTTCCGCTCAAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR-3UTR GCA 90 bp CTGCCCTTCTTCACCCAGATGTCGGTGCTGGCATTGGCTGGGACAGAGACGGCAGGTCCTTGCAAACAGTaGCACTTGGGATCGAGGTAT +
Preference number: 2 (lower is better)
Translates to: LPFFTQMSVLALAGTETAGPCKQ*HLGSRY
Trigger: ATACCTCGATCCCAAGTGGCACTGTTTGCAAGGACC...TGCCGTCTCTGTCCCAGCCAATGCCAGCACCGACATCTGGGTGAAGAAGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR CAA 90 bp GTTAGCTCAGGTTCAAGTAGAGTATGGCCCTCAGGGGACTTGGTCTaGGGTCTCACAGTGTGGGTGACTGGTCCTGGCCGCCTCTCATTT +
Preference number: 2 (lower is better)
Translates to: VSSGSSRVWPSGDLV*GLTVWVTGPGRLSF
Trigger: AAATGAGAGGCGGCCAGGACCAGTCACCCACACTGTGAGACCCAAGACCAAGTCCCCTGAGGGCCATACTCTACTTGAACCTGAGCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR-3UTR CCA 90 bp CTGCCCTTCTTCACCCAGATGTCGGTGCTGGCATTGGCTGGGACAGAGACGGCAATTTCCTGCATGTCCTaGTCTCAGGCAATTGGCTCA +
Preference number: 2 (lower is better)
Translates to: LPFFTQMSVLALAGTETAISCMS*SQAIGS
Trigger: TGAGCCAATTGCCTGAGACCAGGACATGCAGGAAAT...TGCCGTCTCTGTCCCAGCCAATGCCAGCACCGACATCTGGGTGAAGAAGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR-3UTR CCA 90 bp AACTTTATTGGGTGTTGGGTTCAGATGAGGTCCATGAGGATGTCGTCCTCCATGCAGCAGCATCTGACCTaGGGGGCAGCGGGAAGGGAC +
Preference number: 2 (lower is better)
Translates to: NFIGCWVQMRSMRMSSSMQQHLT*GAAGRD
Trigger: GTCCCTTCCCGCTGCCCCCCAGGTCAGATGCTGCTG...CATGGAGGACGACATCCTCATGGACCTCATCTGAACCCAACACCCAATAAAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
3UTR-3UTR GCA 90 bp CCTGGGCCTCTCATCCCACTTCCTCTGGGAACCCAAGGCAGTAAGGTTTCTAGGCTAAGCCCCGCTGAATaGAGACACTTTCCTTTGACC +
Preference number: 2 (lower is better)
Translates to: PGPLIPLPLGTQGSKVSRLSPAE*RHFPLT
Trigger: GGTCAAAGGAAAGTGTCTGCATTCAGCGGGGCTTAG...CCTAGAAACCTTACTGCCTTGGGTTCCCAGAGGAAGTGGGATGAGAGGCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
3UTR CAA 90 bp CAAACATACCAGTTCAGATTTCCTGCATGTCCTGGTCTCAGGCAATaGGCTCAGTTCAAGTACAGGAATGGCAGAGTCGAGGAAGGCGTC +
Preference number: 2 (lower is better)
Translates to: QTYQFRFPACPGLRQ*AQFKYRNGRVEEGV
Trigger: GACGCCTTCCTCGACTCTGCCATTCCTGTACTTGAACTGAGCCAATTGCCTGAGACCAGGACATGCAGGAAATCTGAACTGGTATGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR-3UTR GCA 90 bp AACTTCAACCAAAAGTTTCTAACTGTCCTCCAGGGAACCAGGGCACGGCTCTGCATAAAGCTAGCCATGTaGTCAGAGTTTCTGTGTGGA +
Preference number: 2 (lower is better)
Translates to: NFNQKFLTVLQGTRARLCIKLAM*SEFLCG
Trigger: TCCACACAGAAACTCTGAGCACATGGCTAGCTTTAT...GCAGAGCCGTGCCCTGGTTCCCTGGAGGACAGTTAGAAACTTTTGGTTGAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR-3UTR CCA 90 bp GGCTCTGCACACTTTGAAATGAACCAAACATACCAGTTCAGATTTCCTGCATGTACTGCCTCGGTTGCATaGATATTGCCGCCACCACCA +
Preference number: 2 (lower is better)
Translates to: GSAHFEMNQTYQFRFPACTASVA*ILPPPP
Trigger: TGGTGGTGGCGGCAATATCCATGCAACCGAGGCAGT...ACATGCAGGAAATCTGAACTGGTATGTTTGGTTCATTTCAAAGTGTGCAGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR-3UTR TCA 90 bp CTCAGTTCAAGTACAGGAATGGCAGAGTCGAGGAAGGCGTCATGGTGTTTCTTTTGTGCTTATGAATTCTaGTGTGTTTGCATGCACAGG +
Preference number: 2 (lower is better)
Translates to: LSSSTGMAESRKASWCFFCAYEF*CVCMHR
Trigger: CCTGTGCATGCAAACACATCAGAATTCATAAGCACA...AAAGAAACACCATGACGCCTTCCTCGACTCTGCCATTCCTGTACTTGAACTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR-3UTR CCA 90 bp GGCTCTGCACACTTTGAAATGAACCAAACATACCAGTTCAGATTTCCTGCATGTGTTCAAGTACAGGAATaGCAGAGTCGAGGAAGGCGT +
Preference number: 2 (lower is better)
Translates to: GSAHFEMNQTYQFRFPACVQVQE*QSRGRR
Trigger: ACGCCTTCCTCGACTCTGCCATTCCTGTACTTGAAC...ACATGCAGGAAATCTGAACTGGTATGTTTGGTTCATTTCAAAGTGTGCAGAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR GCA 72 bp AGGTCCATGAGGATGTCGTCCTCCATGACGCTGGGCTaGAGGCCCGGCTGGGGGACCGGGCCCCTGGGACCC +
Preference number: 3 (lower is better)
Translates to: RSMRMSSSMTLG*RPGWGTGPLGP
Trigger: GGGTCCCAGGGGCCCGGTCCCCCAGCCGGGCCTGCAGCCCAGCGTCATGGAGGACGACATCCTCATGGACCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
3UTR GCA 72 bp ACCATGTGCCTGGGGTCCTGGCTGACGTCTGCTGGTTaGTGCAAAGGCTCCAGTAGGGCAGGAGGAGCCGCC +
Preference number: 3 (lower is better)
Translates to: TMCLGSWLTSAG*CKGSSRAGGAA
Trigger: GGCGGCTCCTCCTGCCCTACTGGAGCCTTTGCAGCAACCAGCAGACGTCAGCCAGGACCCCAGGCACATGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208556.2
3UTR GCA 72 bp CCAACAGGCAGCACGAGCCCACGCACAAGCACCATGTaGCTGGGGTCCTGGCTGACGTCTGCTGGTTGCTGC +
Preference number: 3 (lower is better)
Translates to: PTGSTSPRTSTM*LGSWLTSAGCC
Trigger: GCAGCAACCAGCAGACGTCAGCCAGGACCCCAGGCACATGGTGCTTGTGCGTGGGCTCGTGCTGCCTGTTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208556.2
3UTR TCA 72 bp GCCCACGCACAAGCACCATGTGCCTGGGGTCCTGGCTaGCGTCTGCTGGTTGCTGCAAAGGCTCCAGTAGGG +
Preference number: 3 (lower is better)
Translates to: AHAQAPCAWGPG*RLLVAAKAPVG
Trigger: CCCTACTGGAGCCTTTGCAGCAACCAGCAGACGTCAGCCAGGACCCCAGGCACATGGTGCTTGTGCGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208556.2
3UTR GCA 72 bp ATGTGCCTGGGGTCCTGGCTGACGTCTGCTGGTTGCTaGAAAGGCTCCAGTAGGGCAGGAGGAGCCGCCTTC +
Preference number: 3 (lower is better)
Translates to: MCLGSWLTSAGC*KGSSRAGGAAF
Trigger: GAAGGCGGCTCCTCCTGCCCTACTGGAGCCTTTGCAGCAACCAGCAGACGTCAGCCAGGACCCCAGGCACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208556.2
3UTR CCA 72 bp ACGAGCCCACGCACAAGCACCATGTGCCTGGGGTCCTaGCTGACGTCTGCTGGTTGCTGCAAAGGCTCCAGT +
Preference number: 3 (lower is better)
Translates to: TSPRTSTMCLGS*LTSAGCCKGSS
Trigger: ACTGGAGCCTTTGCAGCAACCAGCAGACGTCAGCCAGGACCCCAGGCACATGGTGCTTGTGCGTGGGCTCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208556.2
3UTR-3UTR CAA 90 bp CTGCCCTTCTTCACCCAGATGTCGGTGCTGGCATTGGCTGGGACAGAGACGGCATCAGGGGACTTGGTCTaGGGTCTCACAGTGTGGGTG +
Preference number: 3 (lower is better)
Translates to: LPFFTQMSVLALAGTETASGDLV*GLTVWV
Trigger: CACCCACACTGTGAGACCCAAGACCAAGTCCCCTGA...TGCCGTCTCTGTCCCAGCCAATGCCAGCACCGACATCTGGGTGAAGAAGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR TCA 72 bp TCCTATTTTCTGCACCAGGCTCTCGGTAGTGCAGCCTaGGTAGGTGGTGCTCTCCACGGCGGGCAGGAGGTA +
Preference number: 3 (lower is better)
Translates to: SYFLHQALGSAA*VGGALHGGQEV
Trigger: TACCTCCTGCCCGCCGTGGAGAGCACCACCTACTCAGGCTGCACTACCGAGAGCCTGGTGCAGAAAATAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208556.2
3UTR CCA 72 bp CCACTGAGGACCCTGGGCCTCTCATCCCACTTCCTCTaGGAACCCAAGGCAGTAAGGTTTCTAGGAAGCTCC +
Preference number: 3 (lower is better)
Translates to: PLRTLGLSSHFL*EPKAVRFLGSS
Trigger: GGAGCTTCCTAGAAACCTTACTGCCTTGGGTTCCCAGAGGAAGTGGGATGAGAGGCCCAGGGTCCTCAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
3UTR-3UTR CAA 90 bp CCTGGGCCTCTCATCCCACTTCCTCTGGGAACCCAAGGCAGTAAGGTTTCTAGGTGCAGACACTTTCCTTaGACCCTTCGGGAGCCCTTC +
Preference number: 3 (lower is better)
Translates to: PGPLIPLPLGTQGSKVSRCRHFP*TLREPF
Trigger: GAAGGGCTCCCGAAGGGTCAAAGGAAAGTGTCTGCA...CCTAGAAACCTTACTGCCTTGGGTTCCCAGAGGAAGTGGGATGAGAGGCCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
3UTR TCA 72 bp GCTCCATGGAACGCCAGAAGTCCTTCTAAGCCCCGCTaGATGCAGACACTTTCCTTTGACCCTTCGGGAGCC +
Preference number: 3 (lower is better)
Translates to: APWNARSPSKPR*MQTLSFDPSGA
Trigger: GGCTCCCGAAGGGTCAAAGGAAAGTGTCTGCATTCAGCGGGGCTTAGAAGGACTTCTGGCGTTCCATGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
3UTR GCA 72 bp TGGATCCGGAAGGCCTCACTCTTGTGTGCTTCAGCCTaGAGACGCTTGTCAGGCTCACAGGACAGCCTTGAT +
Preference number: 3 (lower is better)
Translates to: WIRKASLLCASA*RRLSGSQDSLD
Trigger: ATCAAGGCTGTCCTGTGAGCCTGACAAGCGTCTGCAGGCTGAAGCACACAAGAGTGAGGCCTTCCGGATCCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR GCA 72 bp CTGAGACTAGGACCTGACCTGGGTCCTTGCAAACAGTaGCACTTGGGATCGAGGTATGGAACAGCCCCCATG +
Preference number: 3 (lower is better)
Translates to: LRLGPDLGPCKQ*HLGSRYGTAPM
Trigger: CATGGGGGCTGTTCCATACCTCGATCCCAAGTGGCACTGTTTGCAAGGACCCAGGTCAGGTCCTAGTCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR GCA 72 bp AAGGTTGACACCTGCCCTTCTTCACCCAGATGTCGGTaGTGGCATTGGCTGGGACAGAGACGGCAGGTGAAA +
Preference number: 3 (lower is better)
Translates to: KVDTCPSSPRCR*WHWLGQRRQVK
Trigger: TTTCACCTGCCGTCTCTGTCCCAGCCAATGCCAGCACCGACATCTGGGTGAAGAAGGGCAGGTGTCAACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR CCA 72 bp CACAGGAGCAAGTCACTTCAAAGTCAGGGGCTGGCTTaGTGCCACCTCACAGACTGCCTCGGTTGCATGGAT +
Preference number: 3 (lower is better)
Translates to: HRSKSLQSQGLA*CHLTDCLGCMD
Trigger: ATCCATGCAACCGAGGCAGTCTGTGAGGTGGCACCAAGCCAGCCCCTGACTTTGAAGTGACTTGCTCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR CCA 72 bp ACTGTCACAAGCGTGGGCAGCCACTCAGGACACTGCTaGGCAGAGGCAAAGGAACCTTGCCATCTTGCAGAA +
Preference number: 3 (lower is better)
Translates to: TVTSVGSHSGHC*AEAKEPCHLAE
Trigger: TTCTGCAAGATGGCAAGGTTCCTTTGCCTCTGCCCAGCAGTGTCCTGAGTGGCTGCCCACGCTTGTGACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR CCA 72 bp ACCTGCCCTTCTTCACCCAGATGTCGGTGCTGGCATTaGCTGGGACAGAGACGGCAGGTGAAATGTCAACCT +
Preference number: 3 (lower is better)
Translates to: TCPSSPRCRCWH*LGQRRQVKCQP
Trigger: AGGTTGACATTTCACCTGCCGTCTCTGTCCCAGCCAATGCCAGCACCGACATCTGGGTGAAGAAGGGCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR CCA 72 bp GTTGACACCTGCCCTTCTTCACCCAGATGTCGGTGCTaGCATTGGCTGGGACAGAGACGGCAGGTGAAATGT +
Preference number: 3 (lower is better)
Translates to: VDTCPSSPRCRC*HWLGQRRQVKC
Trigger: ACATTTCACCTGCCGTCTCTGTCCCAGCCAATGCCAGCACCGACATCTGGGTGAAGAAGGGCAGGTGTCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR GCA 72 bp AGTTTCTGTGTGGATCCGGAAGGCCTCACTCTTGTGTaGTTCAGCCTGCAGACGCTTGTCAGGCTCACAGGA +
Preference number: 3 (lower is better)
Translates to: SFCVDPEGLTLV*FSLQTLVRLTG
Trigger: TCCTGTGAGCCTGACAAGCGTCTGCAGGCTGAAGCACACAAGAGTGAGGCCTTCCGGATCCACACAGAAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR GCA 72 bp CAAAGGCAGGCAGTCCCACTGTTCCTCGCAAAGGCATaGGCCTGCCAGGACCACACCACAGTCATATACATT +
Preference number: 3 (lower is better)
Translates to: QRQAVPLFLAKA*ACQDHTTVIYI
Trigger: AATGTATATGACTGTGGTGTGGTCCTGGCAGGCGCATGCCTTTGCGAGGAACAGTGGGACTGCCTGCCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR GCA 72 bp CTGGCAGCTTTCTCGGAGAAACGATGGAGAAGTGGATaGCTCGCTCTCCTATTTTCTGCACCAGGCTCTCGG +
Preference number: 3 (lower is better)
Translates to: LAAFSEKRWRSG*LALLFSAPGSR
Trigger: CCGAGAGCCTGGTGCAGAAAATAGGAGAGCGAGGCATCCACTTCTCCATCGTTTCTCCGAGAAAGCTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208556.2
3UTR GCA 72 bp CATGGAACGCCAGAAGTCCTTCTAAGCCCCGCTGAATaGAGACACTTTCCTTTGACCCTTCGGGAGCCCTTC +
Preference number: 3 (lower is better)
Translates to: HGTPEVLLSPAE*RHFPLTLREPF
Trigger: GAAGGGCTCCCGAAGGGTCAAAGGAAAGTGTCTGCATTCAGCGGGGCTTAGAAGGACTTCTGGCGTTCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
3UTR CCA 72 bp CTTGGTCTTGGGTCTCACAGTGTGGGTGACTGGTCCTaGCCGCCTCTCATTTCCAGAAACAAGCTGCACCAA +
Preference number: 3 (lower is better)
Translates to: LGLGSHSVGDWS*PPLISRNKLHQ
Trigger: TTGGTGCAGCTTGTTTCTGGAAATGAGAGGCGGCCAGGACCAGTCACCCACACTGTGAGACCCAAGACCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR CCA 72 bp GAAGCCGGAGGGCTGGCAGCTTTCTCGGAGAAACGATaGAGAAGTGGATGCCTCGCTCTCCTATTTTCTGCA +
Preference number: 3 (lower is better)
Translates to: EAGGLAAFSEKR*RSGCLALLFSA
Trigger: TGCAGAAAATAGGAGAGCGAGGCATCCACTTCTCCATCGTTTCTCCGAGAAAGCTGCCAGCCCTCCGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208556.2
3UTR-3UTR CAA 90 bp GTGTTTGCATGCACAGGAGCAAGTCACTTCAAAGTCAGGGGCTGGCTTGGTGCCGCTCACAGGACAGCCTaGATGACAGCTCTTCAGAAC +
Preference number: 3 (lower is better)
Translates to: VFACTGASHFKVRGWLGAAHRTA*MTALQN
Trigger: GTTCTGAAGAGCTGTCATCAAGGCTGTCCTGTGAGC...GGCACCAAGCCAGCCCCTGACTTTGAAGTGACTTGCTCCTGTGCATGCAAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR-3UTR CAA 90 bp GAGGTATGGAACAGCCCCCATGATGGACAGCCTGGTCACCATGATGGGACTGTATCGGTTGCATGGATATaGCCGCCACCACCACCAATA +
Preference number: 3 (lower is better)
Translates to: EVWNSPHDGQPGHHDGTVSVAWI*PPPPPI
Trigger: TATTGGTGGTGGTGGCGGCAATATCCATGCAACCGA...TACAGTCCCATCATGGTGACCAGGCTGTCCATCATGGGGGCTGTTCCATACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR-3UTR CAA 90 bp CTGGCAGCTTTCTCGGAGAAACGATGGAGAAGTGGATGCCTCGCTCTCCTATTTAGGTACGGGGGTGAGTaGCAGATGAGGAGACAGACT +
Preference number: 3 (lower is better)
Translates to: LAAFSEKRWRSGCLALLFRYGGE*QMRRQT
Trigger: AGTCTGTCTCCTCATCTGCAACTCACCCCCGTACCT...AAATAGGAGAGCGAGGCATCCACTTCTCCATCGTTTCTCCGAGAAAGCTGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208556.2
3UTR CCA 72 bp TGGTCTCAGGCAATTGGCTCAGTTCAAGTACAGGAATaGCAGAGTCGAGGAAGGCGTCATGGTGTTTCTTTG +
Preference number: 3 (lower is better)
Translates to: WSQAIGSVQVQE*QSRGRRHGVSL
Trigger: CAAAGAAACACCATGACGCCTTCCTCGACTCTGCCATTCCTGTACTTGAACTGAGCCAATTGCCTGAGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR CCA 72 bp AGTTCAGATTTCCTGCATGTCCTGGTCTCAGGCAATTaGCTCAGTTCAAGTACAGGAATGGCAGAGTCGAGG +
Preference number: 3 (lower is better)
Translates to: SSDFLHVLVSGN*LSSSTGMAESR
Trigger: CCTCGACTCTGCCATTCCTGTACTTGAACTGAGCCAATTGCCTGAGACCAGGACATGCAGGAAATCTGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR TCA 72 bp AATGGCAGAGTCGAGGAAGGCGTCATGGTGTTTCTTTaGGCATCTCAATTCCTGGTTACTGAGACTAGGACC +
Preference number: 3 (lower is better)
Translates to: NGRVEEGVMVFL*ASQFLVTETRT
Trigger: GGTCCTAGTCTCAGTAACCAGGAATTGAGATGCTCAAAGAAACACCATGACGCCTTCCTCGACTCTGCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR GCA 72 bp ACTGTAGTTGTGCTTATGAATTCTGATGTGTTTGCATaGACAGGAGCAAGTCACTTCAAAGTCAGGGGCTGG +
Preference number: 3 (lower is better)
Translates to: TVVVLMNSDVFA*TGASHFKVRGW
Trigger: CCAGCCCCTGACTTTGAAGTGACTTGCTCCTGTGCATGCAAACACATCAGAATTCATAAGCACAACTACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR CCA 72 bp GAACCAAACATACCAGTTCAGATTTCCTGCATGTCCTaGTCTCAGGCAATTGGCTCAGTTCAAGTACAGGAA +
Preference number: 3 (lower is better)
Translates to: EPNIPVQISCMS*SQAIGSVQVQE
Trigger: TTCCTGTACTTGAACTGAGCCAATTGCCTGAGACCAGGACATGCAGGAAATCTGAACTGGTATGTTTGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR TCA 72 bp ACCACACCACAGTCATATACATTCAGGAGCTGTTCGTaGATATCCCTTCTGAGACAGATTCAGTGTTCACAA +
Preference number: 3 (lower is better)
Translates to: TTPQSYTFRSCS*ISLLRQIQCSQ
Trigger: TTGTGAACACTGAATCTGTCTCAGAAGGGATATTCACGAACAGCTCCTGAATGTATATGACTGTGGTGTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR CCA 72 bp ATATCCCTTCTGAGACAGATTCAGTGTTCACAAGGGTaGGAACTTCAACCAAAAGTTTCTAACTGTCCTCCA +
Preference number: 3 (lower is better)
Translates to: ISLLRQIQCSQG*ELQPKVSNCPP
Trigger: TGGAGGACAGTTAGAAACTTTTGGTTGAAGTTCCCACCCTTGTGAACACTGAATCTGTCTCAGAAGGGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CCA 90 bp ATGAGGTCCATGAGGATGTCGTCCTCCATGACGCTGGGCTGCAGGCCCGGCTGGGCCTGGGTAGCACCTTaGGGCTGGGGCTGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: MRSMRMSSSMTLGCRPGWAWVAP*GWGCPV
Trigger: TACAGGGCAGCCCCAGCCCCAAGGTGCTACCCAGGC...CCAGCCGGGCCTGCAGCCCAGCGTCATGGAGGACGACATCCTCATGGACCTCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
3UTR CAA 72 bp GTGCTCTCCACGGCGGGCAGGAGGTACGGGGGTGAGTaGCAGATGAGGAGACAGACTCGGTGGGTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: VLSTAGRRYGGE*QMRRQTRWVWP
Trigger: TGGCCAGACCCACCGAGTCTGTCTCCTCATCTGCAACTCACCCCCGTACCTCCTGCCCGCCGTGGAGAGCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208556.2
CDS-3UTR TCA 90 bp CAGATGAGGTCCATGAGGATGTCGTCCTCCATGACGCTGGGCTGCAGGCCCGGCGGTCTGCAGAGAGCCTaGGGTCGAGCTGCCACCAAC +
Preference number: 4 (lower is better)
Translates to: QMRSMRMSSSMTLGCRPGGLQRA*GRAATN
Trigger: GTTGGTGGCAGCTCGACCTCAGGCTCTCTGCAGACC...GCCGGGCCTGCAGCCCAGCGTCATGGAGGACGACATCCTCATGGACCTCATCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR CCA 90 bp TGGGTTCAGATGAGGTCCATGAGGATGTCGTCCTCCATGACGCTGGGCTGCAGGTGGTGTAGGGAGGCCTaGGGCGGGGGCACCCCAGTC +
Preference number: 4 (lower is better)
Translates to: WVQMRSMRMSSSMTLGCRWCREA*GGGTPV
Trigger: GACTGGGGTGCCCCCGCCCCAGGCCTCCCTACACCA...CCTGCAGCCCAGCGTCATGGAGGACGACATCCTCATGGACCTCATCTGAACCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR CCA 90 bp ATGAGGTCCATGAGGATGTCGTCCTCCATGACGCTGGGCTGCAGGCCCGGCTGGGCTGGGGAAGCTGTGTaGGCCATGACTGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: MRSMRMSSSMTLGCRPGWAGEAV*AMTGQV
Trigger: CACCTGCCCAGTCATGGCCCACACAGCTTCCCCAGC...CCAGCCGGGCCTGCAGCCCAGCGTCATGGAGGACGACATCCTCATGGACCTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR CCA 90 bp CTGCCCTTCTTCACCCAGATGTCGGTGCTGGCATTGGCTGGGACAGAGACGGCACCCAGCCCGGCCTTCTaGCTCTTGGCAGCCTCCACA +
Preference number: 4 (lower is better)
Translates to: LPFFTQMSVLALAGTETAPSPAF*LLAAST
Trigger: TGTGGAGGCTGCCAAGAGCCAGAAGGCCGGGCTGGG...TGCCGTCTCTGTCCCAGCCAATGCCAGCACCGACATCTGGGTGAAGAAGGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CCA 90 bp TGGGTTCAGATGAGGTCCATGAGGATGTCGTCCTCCATGACGCTGGGCTGCAGGAGGAGCTGCCAGGACTaGTCCGGGGGCCACGGTGGA +
Preference number: 4 (lower is better)
Translates to: WVQMRSMRMSSSMTLGCRRSCQD*SGGHGG
Trigger: TCCACCGTGGCCCCCGGACCAGTCCTGGCAGCTCCT...CCTGCAGCCCAGCGTCATGGAGGACGACATCCTCATGGACCTCATCTGAACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR CCA 90 bp CTGCCCTTCTTCACCCAGATGTCGGTGCTGGCATTGGCTGGGACAGAGACGGCAGCCTGGGTAGCACCTTaGGGCTGGGGCTGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: LPFFTQMSVLALAGTETAAWVAP*GWGCPV
Trigger: TACAGGGCAGCCCCAGCCCCAAGGTGCTACCCAGGC...TGCCGTCTCTGTCCCAGCCAATGCCAGCACCGACATCTGGGTGAAGAAGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CCA 90 bp CCTGGGCCTCTCATCCCACTTCCTCTGGGAACCCAAGGCAGTAAGGTTTCTAGGGCGCCTGTGGGGGCCTaGGTAGCACCTTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PGPLIPLPLGTQGSKVSRAPVGA*VAPWGW
Trigger: CCAGCCCCAAGGTGCTACCCAGGCCCCCACAGGCGC...CCTAGAAACCTTACTGCCTTGGGTTCCCAGAGGAAGTGGGATGAGAGGCCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR TCA 90 bp ACACCTGCCCTTCTTCACCCAGATGTCGGTGCTGGCATTGGCTGGGACAGAGACGCCTGGGGTCCTGGCTaGCGTCTGCTGGTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: TPALLHPDVGAGIGWDRDAWGPG*RLLVAA
Trigger: TGCAGCAACCAGCAGACGTCAGCCAGGACCCCAGGC...GTCTCTGTCCCAGCCAATGCCAGCACCGACATCTGGGTGAAGAAGGGCAGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR GCA 90 bp AGCCCACGCACAAGCACCATGTGCCTGGGGTCCTGGCTGACGTCTGCTGGTTGCGCAGCAGGTAGTGCTTaGGGAGCTCCTCGAAGTACG +
Preference number: 4 (lower is better)
Translates to: SPRTSTMCLGSWLTSAGCAAGSA*GAPRST
Trigger: CGTACTTCGAGGAGCTCCGCAAGCACTACCTGCTGC...GCAACCAGCAGACGTCAGCCAGGACCCCAGGCACATGGTGCTTGTGCGTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208556.2
CDS-3UTR GCA 90 bp CAGATGAGGTCCATGAGGATGTCGTCCTCCATGACGCTGGGCTGCAGGCCCGGCGTCCTGGCTGACGTCTaGTGGTTGCTGCAAAGGCTC +
Preference number: 4 (lower is better)
Translates to: QMRSMRMSSSMTLGCRPGVLADV*WLLQRL
Trigger: GAGCCTTTGCAGCAACCAGCAGACGTCAGCCAGGAC...GCCGGGCCTGCAGCCCAGCGTCATGGAGGACGACATCCTCATGGACCTCATCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR GCA 90 bp CCTGGGCCTCTCATCCCACTTCCTCTGGGAACCCAAGGCAGTAAGGTTTCTAGGTGGGCAGGTGGAGGATaGAGGAGCTGCGGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: PGPLIPLPLGTQGSKVSRWAGGG*RSCGPS
Trigger: GCTGGGGCCGCAGCTCCTGCATCCTCCACCTGCCCA...CCTAGAAACCTTACTGCCTTGGGTTCCCAGAGGAAGTGGGATGAGAGGCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR CCA 90 bp TGGGTTCAGATGAGGTCCATGAGGATGTCGTCCTCCATGACGCTGGGCTGCAGGCCCAGCCCGGCCTTCTaGCTCTTGGCAGCCTCCACA +
Preference number: 4 (lower is better)
Translates to: WVQMRSMRMSSSMTLGCRPSPAF*LLAAST
Trigger: TGTGGAGGCTGCCAAGAGCCAGAAGGCCGGGCTGGG...CCTGCAGCCCAGCGTCATGGAGGACGACATCCTCATGGACCTCATCTGAACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR CCA 90 bp CCTGGGCCTCTCATCCCACTTCCTCTGGGAACCCAAGGCAGTAAGGTTTCTAGGGGGCACAGGAGCCAATaGGGGTGCTGGGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: PGPLIPLPLGTQGSKVSRGHRSQ*GCWGLA
Trigger: AGCCAGGCCCCAGCACCCCCATTGGCTCCTGTGCCC...CCTAGAAACCTTACTGCCTTGGGTTCCCAGAGGAAGTGGGATGAGAGGCCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR CCA 90 bp CCTTTTGAGCGGAAGGTTGACACCTGCCCTTCTTCACCCAGATGTCGGTGCTGGAGGAGCTGCCAGGACTaGTCCGGGGGCCACGGTGGA +
Preference number: 4 (lower is better)
Translates to: PFERKVDTCPSSPRCRCWRSCQD*SGGHGG
Trigger: TCCACCGTGGCCCCCGGACCAGTCCTGGCAGCTCCT...CCAGCACCGACATCTGGGTGAAGAAGGGCAGGTGTCAACCTTCCGCTCAAAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CCA 90 bp GGTCCTGGCCGCCTCTCATTTCCAGAAACAAGCTGCACCAAAGGCAGGCAGTCCCACGCGCACCTCGCATaGGGCCGTGTGCGGGAAATG +
Preference number: 4 (lower is better)
Translates to: GPGRLSFPETSCTKGRQSHAHLA*GRVREM
Trigger: CATTTCCCGCACACGGCCCCATGCGAGGTGCGCGTG...GGACTGCCTGCCTTTGGTGCAGCTTGTTTCTGGAAATGAGAGGCGGCCAGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CCA 90 bp TGGGTTCAGATGAGGTCCATGAGGATGTCGTCCTCCATGACGCTGGGCTGCAGGCACGCGCACCTCGCATaGGGCCGTGTGCGGGAAATG +
Preference number: 4 (lower is better)
Translates to: WVQMRSMRMSSSMTLGCRHAHLA*GRVREM
Trigger: CATTTCCCGCACACGGCCCCATGCGAGGTGCGCGTG...CCTGCAGCCCAGCGTCATGGAGGACGACATCCTCATGGACCTCATCTGAACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR CCA 90 bp ATGAGGTCCATGAGGATGTCGTCCTCCATGACGCTGGGCTGCAGGCCCGGCTGGTGCTGGACCTGCTTGTaGTTGGTGATGACCTGGCGG +
Preference number: 4 (lower is better)
Translates to: MRSMRMSSSMTLGCRPGWCWTCL*LVMTWR
Trigger: CCGCCAGGTCATCACCAACCACAAGCAGGTCCAGCA...CCAGCCGGGCCTGCAGCCCAGCGTCATGGAGGACGACATCCTCATGGACCTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR CCA 90 bp ACACCTGCCCTTCTTCACCCAGATGTCGGTGCTGGCATTGGCTGGGACAGAGACTTGGCCCCAGGGTTCTaGGGCCGCAGGATGGGTCCA +
Preference number: 4 (lower is better)
Translates to: TPALLHPDVGAGIGWDRDLAPGF*GRRMGP
Trigger: TGGACCCATCCTGCGGCCCCAGAACCCTGGGGCCAA...GTCTCTGTCCCAGCCAATGCCAGCACCGACATCTGGGTGAAGAAGGGCAGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR TCA 90 bp CAGATGAGGTCCATGAGGATGTCGTCCTCCATGACGCTGGGCTGCAGGCCCGGCTGCCATCGAGCCAGGTaGCAAACTCATAGGCACTGC +
Preference number: 4 (lower is better)
Translates to: QMRSMRMSSSMTLGCRPGCHRAR*QTHRHC
Trigger: GCAGTGCCTATGAGTTTGTCACCTGGCTCGATGGCA...GCCGGGCCTGCAGCCCAGCGTCATGGAGGACGACATCCTCATGGACCTCATCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR GCA 90 bp CCTGGGCCTCTCATCCCACTTCCTCTGGGAACCCAAGGCAGTAAGGTTTCTAGGTCGCATGGGGCCGTGTaGGGGAAATGCACGCAGCCC +
Preference number: 4 (lower is better)
Translates to: PGPLIPLPLGTQGSKVSRSHGAV*GKCTQP
Trigger: GGGCTGCGTGCATTTCCCGCACACGGCCCCATGCGA...CCTAGAAACCTTACTGCCTTGGGTTCCCAGAGGAAGTGGGATGAGAGGCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR GCA 90 bp ATGAGGTCCATGAGGATGTCGTCCTCCATGACGCTGGGCTGCAGGCCCGGCTGGTGTTGCTCCAGCTTCTaGTGCTGGACCTGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: MRSMRMSSSMTLGCRPGWCCSSF*CWTCLW
Trigger: CCACAAGCAGGTCCAGCAGCAGAAGCTGGAGCAACA...CCAGCCGGGCCTGCAGCCCAGCGTCATGGAGGACGACATCCTCATGGACCTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR GCA 90 bp GAGGTATGGAACAGCCCCCATGATGGACAGCCTGGTCACCATGATGGGACTGTATGGGCAGGTGGAGGATaGAGGAGCTGCGGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: EVWNSPHDGQPGHHDGTVWAGGG*RSCGPS
Trigger: GCTGGGGCCGCAGCTCCTGCATCCTCCACCTGCCCA...TACAGTCCCATCATGGTGACCAGGCTGTCCATCATGGGGGCTGTTCCATACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CCA 90 bp CTGCCCTTCTTCACCCAGATGTCGGTGCTGGCATTGGCTGGGACAGAGACGGCAAACCTGGTACTGTGGTaGGACAGGGGGCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: LPFFTQMSVLALAGTETANLVLW*DRGQSL
Trigger: CAGGCTCTGCCCCCTGTCCCACCACAGTACCAGGTT...TGCCGTCTCTGTCCCAGCCAATGCCAGCACCGACATCTGGGTGAAGAAGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR GCA 90 bp CTGCCCTTCTTCACCCAGATGTCGGTGCTGGCATTGGCTGGGACAGAGACGGCAGCAGCAGGTAGTGCTTaGGGAGCTCCTCGAAGTACG +
Preference number: 4 (lower is better)
Translates to: LPFFTQMSVLALAGTETAAAGSA*GAPRST
Trigger: CGTACTTCGAGGAGCTCCGCAAGCACTACCTGCTGC...TGCCGTCTCTGTCCCAGCCAATGCCAGCACCGACATCTGGGTGAAGAAGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR GCA 90 bp ACAGGAGCAAGTCACTTCAAAGTCAGGGGCTGGCTTGGTGCCACCTCACAGACTTCGCATGGGGCCGTGTaGGGGAAATGCACGCAGCCC +
Preference number: 4 (lower is better)
Translates to: TGASHFKVRGWLGATSQTSHGAV*GKCTQP
Trigger: GGGCTGCGTGCATTTCCCGCACACGGCCCCATGCGA...AGTCTGTGAGGTGGCACCAAGCCAGCCCCTGACTTTGAAGTGACTTGCTCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR GCA 90 bp GGTCCTGGCCGCCTCTCATTTCCAGAAACAAGCTGCACCAAAGGCAGGCAGTCCCCCAGTCTGGGGCGGTaGTGGGTTAAGGAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: GPGRLSFPETSCTKGRQSPSLGR*WVKEKA
Trigger: AGCCTTCTCCTTAACCCAGCACCGCCCCAGACTGGG...GGACTGCCTGCCTTTGGTGCAGCTTGTTTCTGGAAATGAGAGGCGGCCAGGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR GCA 90 bp TGGGTTCAGATGAGGTCCATGAGGATGTCGTCCTCCATGACGCTGGGCTGCAGGCCCAGTCTGGGGCGGTaGTGGGTTAAGGAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: WVQMRSMRMSSSMTLGCRPSLGR*WVKEKA
Trigger: AGCCTTCTCCTTAACCCAGCACCGCCCCAGACTGGG...CCTGCAGCCCAGCGTCATGGAGGACGACATCCTCATGGACCTCATCTGAACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR CCA 90 bp ATGAGGTCCATGAGGATGTCGTCCTCCATGACGCTGGGCTGCAGGCCCGGCTGGAGGAGACAGACTCGGTaGGTCTGGCCAATCTGTTCA +
Preference number: 4 (lower is better)
Translates to: MRSMRMSSSMTLGCRPGWRRQTR*VWPICS
Trigger: TGAACAGATTGGCCAGACCCACCGAGTCTGTCTCCT...CCAGCCGGGCCTGCAGCCCAGCGTCATGGAGGACGACATCCTCATGGACCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR CCA 90 bp TGGGTTCAGATGAGGTCCATGAGGATGTCGTCCTCCATGACGCTGGGCTGCAGGAACCTGGTACTGTGGTaGGACAGGGGGCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: WVQMRSMRMSSSMTLGCRNLVLW*DRGQSL
Trigger: CAGGCTCTGCCCCCTGTCCCACCACAGTACCAGGTT...CCTGCAGCCCAGCGTCATGGAGGACGACATCCTCATGGACCTCATCTGAACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR CCA 90 bp CAGATGAGGTCCATGAGGATGTCGTCCTCCATGACGCTGGGCTGCAGGCCCGGCTCGTCAGCTTGGTGTTaGCATCCACAGATGCAGGCT +
Preference number: 4 (lower is better)
Translates to: QMRSMRMSSSMTLGCRPGSSAWC*HPQMQA
Trigger: AGCCTGCATCTGTGGATGCCAACACCAAGCTGACGA...GCCGGGCCTGCAGCCCAGCGTCATGGAGGACGACATCCTCATGGACCTCATCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR CCA 90 bp CCTGGGCCTCTCATCCCACTTCCTCTGGGAACCCAAGGCAGTAAGGTTTCTAGGACAGCGGACCCAGGGTaGTCAGCAGCTGCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: PGPLIPLPLGTQGSKVSRTADPG*SAAAEG
Trigger: TCCCTCAGCAGCTGCTGACCACCCTGGGTCCGCTGT...CCTAGAAACCTTACTGCCTTGGGTTCCCAGAGGAAGTGGGATGAGAGGCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR CCA 90 bp CTGCCCTTCTTCACCCAGATGTCGGTGCTGGCATTGGCTGGGACAGAGACGGCATGCTGGACCTGCTTGTaGTTGGTGATGACCTGGCGG +
Preference number: 4 (lower is better)
Translates to: LPFFTQMSVLALAGTETACWTCL*LVMTWR
Trigger: CCGCCAGGTCATCACCAACCACAAGCAGGTCCAGCA...TGCCGTCTCTGTCCCAGCCAATGCCAGCACCGACATCTGGGTGAAGAAGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CCA 90 bp TCCAGGGAACCAGGGCACGGCTCTGCACACTTTGAAATGAACCAAACATACCAGGCGCCTGTGGGGGCCTaGGTAGCACCTTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SREPGHGSAHFEMNQTYQAPVGA*VAPWGW
Trigger: CCAGCCCCAAGGTGCTACCCAGGCCCCCACAGGCGC...CTGGTATGTTTGGTTCATTTCAAAGTGTGCAGAGCCGTGCCCTGGTTCCCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CCA 90 bp AGTGTGGGTGACTGGTCCTGGCCGCCTCTCATTTCCAGAAACAAGCTGCACCAAAGAAGGCTCCGCAGCTaGGGGTTGGCCCCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: SVGDWSWPPLISRNKLHQRRLRS*GLAPGF
Trigger: GAACCCTGGGGCCAACCCCCAGCTGCGGAGCCTTCT...TTGGTGCAGCTTGTTTCTGGAAATGAGAGGCGGCCAGGACCAGTCACCCACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CCA 90 bp ACCCTGGGCCTCTCATCCCACTTCCTCTGGGAACCCAAGGCAGTAAGGTTTCTAAGAAGGCTCCGCAGCTaGGGGTTGGCCCCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: TLGLSSHFLWEPKAVRFLRRLRS*GLAPGF
Trigger: GAACCCTGGGGCCAACCCCCAGCTGCGGAGCCTTCT...TAGAAACCTTACTGCCTTGGGTTCCCAGAGGAAGTGGGATGAGAGGCCCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
3UTR CAA 72 bp GGTTCAAGTAGAGTATGGCCCTCAGGGGACTTGGTCTaGGGTCTCACAGTGTGGGTGACTGGTCCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: GSSRVWPSGDLV*GLTVWVTGPGR
Trigger: GCGGCCAGGACCAGTCACCCACACTGTGAGACCCAAGACCAAGTCCCCTGAGGGCCATACTCTACTTGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR TCA 90 bp TGGGTTCAGATGAGGTCCATGAGGATGTCGTCCTCCATGACGCTGGGCTGCAGGCAGGAGGTACGGGGGTaGGTTGCAGATGAGGAGACA +
Preference number: 4 (lower is better)
Translates to: WVQMRSMRMSSSMTLGCRQEVRG*VADEET
Trigger: TGTCTCCTCATCTGCAACTCACCCCCGTACCTCCTG...CCTGCAGCCCAGCGTCATGGAGGACGACATCCTCATGGACCTCATCTGAACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR TCA 90 bp GTGTTTGCATGCACAGGAGCAAGTCACTTCAAAGTCAGGGGCTGGCTTGGTGCCGGTCTGCAGAGAGCCTaGGGTCGAGCTGCCACCAAC +
Preference number: 4 (lower is better)
Translates to: VFACTGASHFKVRGWLGAGLQRA*GRAATN
Trigger: GTTGGTGGCAGCTCGACCTCAGGCTCTCTGCAGACC...GGCACCAAGCCAGCCCCTGACTTTGAAGTGACTTGCTCCTGTGCATGCAAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR GCA 90 bp ACCCTGGGCCTCTCATCCCACTTCCTCTGGGAACCCAAGGCAGTAAGGTTTCTACGCACAAGCACCATGTaGCTGGGGTCCTGGCTGACG +
Preference number: 4 (lower is better)
Translates to: TLGLSSHFLWEPKAVRFLRTSTM*LGSWLT
Trigger: CGTCAGCCAGGACCCCAGGCACATGGTGCTTGTGCG...TAGAAACCTTACTGCCTTGGGTTCCCAGAGGAAGTGGGATGAGAGGCCCAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR GCA 90 bp ACCCTGGGCCTCTCATCCCACTTCCTCTGGGAACCCAAGGCAGTAAGGTTTCTAGCCGTGTGCGGGAAATaGACGCAGCCCGCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: TLGLSSHFLWEPKAVRFLAVCGK*TQPAKP
Trigger: TGGCTTTGCGGGCTGCGTGCATTTCCCGCACACGGC...TAGAAACCTTACTGCCTTGGGTTCCCAGAGGAAGTGGGATGAGAGGCCCAGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR CCA 90 bp CAGATGAGGTCCATGAGGATGTCGTCCTCCATGACGCTGGGCTGCAGGCCCGGCTTGTACATAGGACTCTaGAGCGCAGTCCACGGTGTT +
Preference number: 4 (lower is better)
Translates to: QMRSMRMSSSMTLGCRPGLYIGL*SAVHGV
Trigger: AACACCGTGGACTGCGCTCCAGAGTCCTATGTACAA...GCCGGGCCTGCAGCCCAGCGTCATGGAGGACGACATCCTCATGGACCTCATCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR CCA 90 bp CTGCCCTTCTTCACCCAGATGTCGGTGCTGGCATTGGCTGGGACAGAGACGGCACAGACTCGGTGGGTCTaGCCAATCTGTTCACGCATC +
Preference number: 4 (lower is better)
Translates to: LPFFTQMSVLALAGTETAQTRWV*PICSRI
Trigger: GATGCGTGAACAGATTGGCCAGACCCACCGAGTCTG...TGCCGTCTCTGTCCCAGCCAATGCCAGCACCGACATCTGGGTGAAGAAGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CCA 90 bp CCTTTTGAGCGGAAGGTTGACACCTGCCCTTCTTCACCCAGATGTCGGTGCTGGAGGAACCTGGTACTGTaGTGGGACAGGGGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: PFERKVDTCPSSPRCRCWRNLVL*WDRGQS
Trigger: GCTCTGCCCCCTGTCCCACCACAGTACCAGGTTCCT...CCAGCACCGACATCTGGGTGAAGAAGGGCAGGTGTCAACCTTCCGCTCAAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CCA 90 bp CACAGTGTGGGTGACTGGTCCTGGCCGCCTCTCATTTCCAGAAACAAGCTGCACGCAGGACCCCCAAGCTaGGCTGCTGAAGGACCATTG +
Preference number: 4 (lower is better)
Translates to: HSVGDWSWPPLISRNKLHAGPPS*AAEGPL
Trigger: CAATGGTCCTTCAGCAGCCCAGCTTGGGGGTCCTGC...GTGCAGCTTGTTTCTGGAAATGAGAGGCGGCCAGGACCAGTCACCCACACTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR GCA 90 bp CCTGGGCCTCTCATCCCACTTCCTCTGGGAACCCAAGGCAGTAAGGTTTCTAGGGCAGCAGGTAGTGCTTaGGGAGCTCCTCGAAGTACG +
Preference number: 4 (lower is better)
Translates to: PGPLIPLPLGTQGSKVSRAAGSA*GAPRST
Trigger: CGTACTTCGAGGAGCTCCGCAAGCACTACCTGCTGC...CCTAGAAACCTTACTGCCTTGGGTTCCCAGAGGAAGTGGGATGAGAGGCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR GCA 90 bp CAGGCTCACAGGACAGCCTTGATGACAGCTCTTCAGAACACGGGAGTTCTTTCCCGCACAAGCACCATGTaGCTGGGGTCCTGGCTGACG +
Preference number: 4 (lower is better)
Translates to: QAHRTALMTALQNTGVLSRTSTM*LGSWLT
Trigger: CGTCAGCCAGGACCCCAGGCACATGGTGCTTGTGCG...GGAAAGAACTCCCGTGTTCTGAAGAGCTGTCATCAAGGCTGTCCTGTGAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR GCA 90 bp CCTGGGCCTCTCATCCCACTTCCTCTGGGAACCCAAGGCAGTAAGGTTTCTAGGGGCAAGGGGACTGCTTaGTTGGTCTGCAGAGAGCCT +
Preference number: 4 (lower is better)
Translates to: PGPLIPLPLGTQGSKVSRGKGTA*LVCREP
Trigger: AGGCTCTCTGCAGACCAAGCAAGCAGTCCCCTTGCC...CCTAGAAACCTTACTGCCTTGGGTTCCCAGAGGAAGTGGGATGAGAGGCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR GCA 90 bp ACACCTGCCCTTCTTCACCCAGATGTCGGTGCTGGCATTGGCTGGGACAGAGACACTCCTGGAGCAGCTTaGTGGAGAGGGTTGATGGGT +
Preference number: 4 (lower is better)
Translates to: TPALLHPDVGAGIGWDRDTPGAA*WRGLMG
Trigger: ACCCATCAACCCTCTCCAGCAAGCTGCTCCAGGAGT...GTCTCTGTCCCAGCCAATGCCAGCACCGACATCTGGGTGAAGAAGGGCAGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR GCA 90 bp TGGGTTCAGATGAGGTCCATGAGGATGTCGTCCTCCATGACGCTGGGCTGCAGGACTCCTGGAGCAGCTTaGTGGAGAGGGTTGATGGGT +
Preference number: 4 (lower is better)
Translates to: WVQMRSMRMSSSMTLGCRTPGAA*WRGLMG
Trigger: ACCCATCAACCCTCTCCAGCAAGCTGCTCCAGGAGT...CCTGCAGCCCAGCGTCATGGAGGACGACATCCTCATGGACCTCATCTGAACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR GCA 90 bp CCTTTTGAGCGGAAGGTTGACACCTGCCCTTCTTCACCCAGATGTCGGTGCTGGGGCTTGGGTTTCTCCTaGCACTCGAGGACTCCACTC +
Preference number: 4 (lower is better)
Translates to: PFERKVDTCPSSPRCRCWGLGFS*HSRTPL
Trigger: GAGTGGAGTCCTCGAGTGGCAGGAGAAACCCAAGCC...CCAGCACCGACATCTGGGTGAAGAAGGGCAGGTGTCAACCTTCCGCTCAAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR GCA 90 bp CTGCCCTTCTTCACCCAGATGTCGGTGCTGGCATTGGCTGGGACAGAGACGGCATTCTGCTGCTGGACCTaGTTGTGGTTGGTGATGACC +
Preference number: 4 (lower is better)
Translates to: LPFFTQMSVLALAGTETAFCCWT*LWLVMT
Trigger: GGTCATCACCAACCACAAGCAGGTCCAGCAGCAGAA...TGCCGTCTCTGTCCCAGCCAATGCCAGCACCGACATCTGGGTGAAGAAGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR GCA 90 bp ACACCTGCCCTTCTTCACCCAGATGTCGGTGCTGGCATTGGCTGGGACAGAGACTGTTGCTCCAGCTTCTaGTGCTGGACCTGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: TPALLHPDVGAGIGWDRDCCSSF*CWTCLW
Trigger: CCACAAGCAGGTCCAGCAGCAGAAGCTGGAGCAACA...GTCTCTGTCCCAGCCAATGCCAGCACCGACATCTGGGTGAAGAAGGGCAGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR GCA 90 bp TGGTCTCAGGCAATTGGCTCAGTTCAAGTACAGGAATGGCAGAGTCGAGGAAGGAGGAGGACCTTGAGGTaGGCCTGTGGGGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: WSQAIGSVQVQEWQSRGRRRTLR*ACGGLG
Trigger: ACCCAGGCCCCCACAGGCGCACCTCAAGGTCCTCCT...CCTTCCTCGACTCTGCCATTCCTGTACTTGAACTGAGCCAATTGCCTGAGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CCA 90 bp GTACAGGAATGGCAGAGTCGAGGAAGGCGTCATGGTGTTTCTTTGAGCATCTCAGGGCACAGGAGCCAATaGGGGTGCTGGGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: VQEWQSRGRRHGVSLSISGHRSQ*GCWGLA
Trigger: AGCCAGGCCCCAGCACCCCCATTGGCTCCTGTGCCC...TGAGATGCTCAAAGAAACACCATGACGCCTTCCTCGACTCTGCCATTCCTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CCA 90 bp CCTGGGCCTCTCATCCCACTTCCTCTGGGAACCCAAGGCAGTAAGGTTTCTAGGACCATTGACCCCACCTaGGGTTACAGTGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: PGPLIPLPLGTQGSKVSRTIDPT*GYSACQ
Trigger: CTGGCAGGCACTGTAACCCCAGGTGGGGTCAATGGT...CCTAGAAACCTTACTGCCTTGGGTTCCCAGAGGAAGTGGGATGAGAGGCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR CCA 90 bp CTGCCCTTCTTCACCCAGATGTCGGTGCTGGCATTGGCTGGGACAGAGACGGCATCGTCAGCTTGGTGTTaGCATCCACAGATGCAGGCT +
Preference number: 4 (lower is better)
Translates to: LPFFTQMSVLALAGTETASSAWC*HPQMQA
Trigger: AGCCTGCATCTGTGGATGCCAACACCAAGCTGACGA...TGCCGTCTCTGTCCCAGCCAATGCCAGCACCGACATCTGGGTGAAGAAGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CCA 90 bp CTGCCCTTCTTCACCCAGATGTCGGTGCTGGCATTGGCTGGGACAGAGACGGCAGAGACCTCGTCAGCTTaGTGTTGGCATCCACAGATG +
Preference number: 4 (lower is better)
Translates to: LPFFTQMSVLALAGTETAETSSA*CWHPQM
Trigger: CATCTGTGGATGCCAACACCAAGCTGACGAGGTCTC...TGCCGTCTCTGTCCCAGCCAATGCCAGCACCGACATCTGGGTGAAGAAGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CCA 90 bp CCTGGGCCTCTCATCCCACTTCCTCTGGGAACCCAAGGCAGTAAGGTTTCTAGGCATGCTCTGATGTGGTaGCAGCAATGTAGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: PGPLIPLPLGTQGSKVSRHALMW*QQCRGP
Trigger: GGGGCCCCTACATTGCTGCCACCACATCAGAGCATG...CCTAGAAACCTTACTGCCTTGGGTTCCCAGAGGAAGTGGGATGAGAGGCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
3UTR CAA 72 bp CACCTGCCCTTCTTCACCCAGATGTCGGTGCTGGCATaGGCTGGGACAGAGACGGCAGGTGAAATGTCAACC +
Preference number: 4 (lower is better)
Translates to: HLPFFTQMSVLA*AGTETAGEMST
Trigger: GGTTGACATTTCACCTGCCGTCTCTGTCCCAGCCAATGCCAGCACCGACATCTGGGTGAAGAAGGGCAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR TCA 90 bp CCTGGGCCTCTCATCCCACTTCCTCTGGGAACCCAAGGCAGTAAGGTTTCTAGGGAGCTTGTTGGATACTaGCTGCTGCCCACCAAGTGC +
Preference number: 4 (lower is better)
Translates to: PGPLIPLPLGTQGSKVSRELVGY*LLPTKC
Trigger: GCACTTGGTGGGCAGCAGTCAGTATCCAACAAGCTC...CCTAGAAACCTTACTGCCTTGGGTTCCCAGAGGAAGTGGGATGAGAGGCCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR TCA 90 bp GGTCCTGGCCGCCTCTCATTTCCAGAAACAAGCTGCACCAAAGGCAGGCAGTCCGAACTGAACCATTCTTaGGTTCCGGAACAGCGGACC +
Preference number: 4 (lower is better)
Translates to: GPGRLSFPETSCTKGRQSELNHS*VPEQRT
Trigger: GGTCCGCTGTTCCGGAACTCAAGAATGGTTCAGTTC...GGACTGCCTGCCTTTGGTGCAGCTTGTTTCTGGAAATGAGAGGCGGCCAGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR GCA 90 bp CAGGCTCACAGGACAGCCTTGATGACAGCTCTTCAGAACACGGGAGTTCTTTCCAGCCTGAGGTCGAGCTaGCACCAACAGGCAGCACGA +
Preference number: 4 (lower is better)
Translates to: QAHRTALMTALQNTGVLSSLRSS*HQQAAR
Trigger: TCGTGCTGCCTGTTGGTGGCAGCTCGACCTCAGGCT...GGAAAGAACTCCCGTGTTCTGAAGAGCTGTCATCAAGGCTGTCCTGTGAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR GCA 90 bp CCTGGGCCTCTCATCCCACTTCCTCTGGGAACCCAAGGCAGTAAGGTTTCTAGGTGGTGGCAAGGGGACTaGTTGCTTGGTCTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: PGPLIPLPLGTQGSKVSRWWQGD*LLGLQR
Trigger: TCTCTGCAGACCAAGCAAGCAGTCCCCTTGCCACCA...CCTAGAAACCTTACTGCCTTGGGTTCCCAGAGGAAGTGGGATGAGAGGCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR GCA 90 bp GTACAGGAATGGCAGAGTCGAGGAAGGCGTCATGGTGTTTCTTTGAGCATCTCACACCTGGGGTTACAGTaGCTGCCAGAGACGGCGCCC +
Preference number: 4 (lower is better)
Translates to: VQEWQSRGRRHGVSLSISHLGLQ*LPETAP
Trigger: GGGCGCCGTCTCTGGCAGGCACTGTAACCCCAGGTG...TGAGATGCTCAAAGAAACACCATGACGCCTTCCTCGACTCTGCCATTCCTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR GCA 90 bp TCCAGGGAACCAGGGCACGGCTCTGCACACTTTGAAATGAACCAAACATACCAGGCCGTGTGCGGGAAATaGACGCAGCCCGCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: SREPGHGSAHFEMNQTYQAVCGK*TQPAKP
Trigger: TGGCTTTGCGGGCTGCGTGCATTTCCCGCACACGGC...CTGGTATGTTTGGTTCATTTCAAAGTGTGCAGAGCCGTGCCCTGGTTCCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CCA 90 bp CTCTCATCCCACTTCCTCTGGGAACCCAAGGCAGTAAGGTTTCTAGGAAGCTCCAGGAACCTGGTACTGTaGTGGGACAGGGGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: LSSHFLWEPKAVRFLGSSRNLVL*WDRGQS
Trigger: GCTCTGCCCCCTGTCCCACCACAGTACCAGGTTCCT...GGAGCTTCCTAGAAACCTTACTGCCTTGGGTTCCCAGAGGAAGTGGGATGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR CCA 90 bp CTTTATTGGGTGTTGGGTTCAGATGAGGTCCATGAGGATGTCGTCCTCCATGACTTGGCCCCAGGGTTCTaGGGCCGCAGGATGGGTCCA +
Preference number: 4 (lower is better)
Translates to: LYWVLGSDEVHEDVVLHDLAPGF*GRRMGP
Trigger: TGGACCCATCCTGCGGCCCCAGAACCCTGGGGCCAA...GTCATGGAGGACGACATCCTCATGGACCTCATCTGAACCCAACACCCAATAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR CCA 90 bp CTTTATTGGGTGTTGGGTTCAGATGAGGTCCATGAGGATGTCGTCCTCCATGACACCCTTACCTGGCAGTaGCGCCCGCTGGGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LYWVLGSDEVHEDVVLHDTLTWQ*RPLGKL
Trigger: CAGCTTCCCCAGCGGGCGCCACTGCCAGGTAAGGGT...GTCATGGAGGACGACATCCTCATGGACCTCATCTGAACCCAACACCCAATAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR TCA 90 bp AGTGTGGGTGACTGGTCCTGGCCGCCTCTCATTTCCAGAAACAAGCTGCACCAAGAGCTTGTTGGATACTaGCTGCTGCCCACCAAGTGC +
Preference number: 4 (lower is better)
Translates to: SVGDWSWPPLISRNKLHQELVGY*LLPTKC
Trigger: GCACTTGGTGGGCAGCAGTCAGTATCCAACAAGCTC...TTGGTGCAGCTTGTTTCTGGAAATGAGAGGCGGCCAGGACCAGTCACCCACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR TCA 90 bp TGGGTTCAGATGAGGTCCATGAGGATGTCGTCCTCCATGACGCTGGGCTGCAGGCCAGGTCCTTGTTGGTaGAGTGGAACTGAACCATTC +
Preference number: 4 (lower is better)
Translates to: WVQMRSMRMSSSMTLGCRPGPCW*SGTEPF
Trigger: GAATGGTTCAGTTCCACTTCACCAACAAGGACCTGG...CCTGCAGCCCAGCGTCATGGAGGACGACATCCTCATGGACCTCATCTGAACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR GCA 90 bp ACCCTGGGCCTCTCATCCCACTTCCTCTGGGAACCCAAGGCAGTAAGGTTTCTAACGTCTGCTGGTTGCTaGAAAGGCTCCAGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: TLGLSSHFLWEPKAVRFLTSAGC*KGSSRA
Trigger: TGCCCTACTGGAGCCTTTGCAGCAACCAGCAGACGT...TAGAAACCTTACTGCCTTGGGTTCCCAGAGGAAGTGGGATGAGAGGCCCAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR GCA 90 bp ACAGGAGCAAGTCACTTCAAAGTCAGGGGCTGGCTTGGTGCCACCTCACAGACTTGGTGGCAAGGGGACTaGTTGCTTGGTCTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: TGASHFKVRGWLGATSQTWWQGD*LLGLQR
Trigger: TCTCTGCAGACCAAGCAAGCAGTCCCCTTGCCACCA...AGTCTGTGAGGTGGCACCAAGCCAGCCCCTGACTTTGAAGTGACTTGCTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR GCA 90 bp AACTTTATTGGGTGTTGGGTTCAGATGAGGTCCATGAGGATGTCGTCCTCCATGCACCTGGGGTTACAGTaGCTGCCAGAGACGGCGCCC +
Preference number: 4 (lower is better)
Translates to: NFIGCWVQMRSMRMSSSMHLGLQ*LPETAP
Trigger: GGGCGCCGTCTCTGGCAGGCACTGTAACCCCAGGTG...CATGGAGGACGACATCCTCATGGACCTCATCTGAACCCAACACCCAATAAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR GCA 90 bp CCTGGGCCTCTCATCCCACTTCCTCTGGGAACCCAAGGCAGTAAGGTTTCTAGGGTTGGCATCCACAGATaGAGGCTTGGGTTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: PGPLIPLPLGTQGSKVSRVGIHR*RLGFLL
Trigger: CAGGAGAAACCCAAGCCTGCATCTGTGGATGCCAAC...CCTAGAAACCTTACTGCCTTGGGTTCCCAGAGGAAGTGGGATGAGAGGCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR GCA 90 bp ACAGGAGCAAGTCACTTCAAAGTCAGGGGCTGGCTTGGTGCCACCTCACAGACTTGCTCCAGCTTCTGCTaGTGGACCTGCTTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: TGASHFKVRGWLGATSQTCSSFC*WTCLWL
Trigger: CAACCACAAGCAGGTCCAGCAGCAGAAGCTGGAGCA...AGTCTGTGAGGTGGCACCAAGCCAGCCCCTGACTTTGAAGTGACTTGCTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR GCA 90 bp ACCCTGGGCCTCTCATCCCACTTCCTCTGGGAACCCAAGGCAGTAAGGTTTCTATGCTCCAGCTTCTGCTaGTGGACCTGCTTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: TLGLSSHFLWEPKAVRFLCSSFC*WTCLWL
Trigger: CAACCACAAGCAGGTCCAGCAGCAGAAGCTGGAGCA...TAGAAACCTTACTGCCTTGGGTTCCCAGAGGAAGTGGGATGAGAGGCCCAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR GCA 90 bp AACTTTATTGGGTGTTGGGTTCAGATGAGGTCCATGAGGATGTCGTCCTCCATGAGGAGGACCTTGAGGTaGGCCTGTGGGGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: NFIGCWVQMRSMRMSSSMRRTLR*ACGGLG
Trigger: ACCCAGGCCCCCACAGGCGCACCTCAAGGTCCTCCT...CATGGAGGACGACATCCTCATGGACCTCATCTGAACCCAACACCCAATAAAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR CCA 90 bp GTACAGGAATGGCAGAGTCGAGGAAGGCGTCATGGTGTTTCTTTGAGCATCTCAGCGCTGCTGACAGCGTaGCAGCAGAAGCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: VQEWQSRGRRHGVSLSISALLTA*QQKLEL
Trigger: CAGCTCCAGCTTCTGCTGCCACGCTGTCAGCAGCGC...TGAGATGCTCAAAGAAACACCATGACGCCTTCCTCGACTCTGCCATTCCTGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CCA 90 bp AGTGTGGGTGACTGGTCCTGGCCGCCTCTCATTTCCAGAAACAAGCTGCACCAACCACAGATGCAGGCTTaGGTTTCTCCTGCCACTCGA +
Preference number: 4 (lower is better)
Translates to: SVGDWSWPPLISRNKLHQPQMQA*VSPATR
Trigger: TCGAGTGGCAGGAGAAACCCAAGCCTGCATCTGTGG...TTGGTGCAGCTTGTTTCTGGAAATGAGAGGCGGCCAGGACCAGTCACCCACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CCA 90 bp ACCCTGGGCCTCTCATCCCACTTCCTCTGGGAACCCAAGGCAGTAAGGTTTCTACCACAGATGCAGGCTTaGGTTTCTCCTGCCACTCGA +
Preference number: 4 (lower is better)
Translates to: TLGLSSHFLWEPKAVRFLPQMQA*VSPATR
Trigger: TCGAGTGGCAGGAGAAACCCAAGCCTGCATCTGTGG...TAGAAACCTTACTGCCTTGGGTTCCCAGAGGAAGTGGGATGAGAGGCCCAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR CCA 90 bp AGTGTGGGTGACTGGTCCTGGCCGCCTCTCATTTCCAGAAACAAGCTGCACCAATCCAGCTTCTGCTGCTaGACCTGCTTGTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: SVGDWSWPPLISRNKLHQSSFCC*TCLWLV
Trigger: CACCAACCACAAGCAGGTCCAGCAGCAGAAGCTGGA...TTGGTGCAGCTTGTTTCTGGAAATGAGAGGCGGCCAGGACCAGTCACCCACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CCA 90 bp TCCAGGGAACCAGGGCACGGCTCTGCACACTTTGAAATGAACCAAACATACCAGAGTCTGGGGCGGTGCTaGGTTAAGGAGAAGGCTCCG +
Preference number: 4 (lower is better)
Translates to: SREPGHGSAHFEMNQTYQSLGRC*VKEKAP
Trigger: CGGAGCCTTCTCCTTAACCCAGCACCGCCCCAGACT...CTGGTATGTTTGGTTCATTTCAAAGTGTGCAGAGCCGTGCCCTGGTTCCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CCA 90 bp TCTCTTGTAATTTTCTTGTGCCTTTTGAGCGGAAGGTTGACACCTGCCCTTCTTTGGTGTAGGGAGGCCTaGGGCGGGGGCACCCCAGTC +
Preference number: 4 (lower is better)
Translates to: SLVIFLCLLSGRLTPALLWCREA*GGGTPV
Trigger: GACTGGGGTGCCCCCGCCCCAGGCCTCCCTACACCA...AAGAAGGGCAGGTGTCAACCTTCCGCTCAAAAGGCACAAGAAAATTACAAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CCA 90 bp GTACAGGAATGGCAGAGTCGAGGAAGGCGTCATGGTGTTTCTTTGAGCATCTCAGCTGGGGAAGCTGTGTaGGCCATGACTGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: VQEWQSRGRRHGVSLSISAGEAV*AMTGQV
Trigger: CACCTGCCCAGTCATGGCCCACACAGCTTCCCCAGC...TGAGATGCTCAAAGAAACACCATGACGCCTTCCTCGACTCTGCCATTCCTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CCA 90 bp CAGGCTCACAGGACAGCCTTGATGACAGCTCTTCAGAACACGGGAGTTCTTTCCCTTCTCTCTTTCGTTTaGCCACTGGCAGTGGCGCCC +
Preference number: 4 (lower is better)
Translates to: QAHRTALMTALQNTGVLSLLSFV*PLAVAP
Trigger: GGGCGCCACTGCCAGTGGCCAAACGAAAGAGAGAAG...GGAAAGAACTCCCGTGTTCTGAAGAGCTGTCATCAAGGCTGTCCTGTGAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR CAA 72 bp CAGCCTGCAGACGCTTGTCAGGCTCACAGGACAGCCTaGATGACAGCTCTTCAGAACACGGGAGTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: QPADACQAHRTA*MTALQNTGVLS
Trigger: GGAAAGAACTCCCGTGTTCTGAAGAGCTGTCATCAAGGCTGTCCTGTGAGCCTGACAAGCGTCTGCAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR GCA 90 bp AACTTCAACCAAAAGTTTCTAACTGTCCTCCAGGGAACCAGGGCACGGCTCTGCGTCCTGGCTGACGTCTaGTGGTTGCTGCAAAGGCTC +
Preference number: 4 (lower is better)
Translates to: NFNQKFLTVLQGTRARLCVLADV*WLLQRL
Trigger: GAGCCTTTGCAGCAACCAGCAGACGTCAGCCAGGAC...GCAGAGCCGTGCCCTGGTTCCCTGGAGGACAGTTAGAAACTTTTGGTTGAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR GCA 90 bp AGTGTGGGTGACTGGTCCTGGCCGCCTCTCATTTCCAGAAACAAGCTGCACCAAGTTGGCATCCACAGATaGAGGCTTGGGTTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SVGDWSWPPLISRNKLHQVGIHR*RLGFLL
Trigger: CAGGAGAAACCCAAGCCTGCATCTGTGGATGCCAAC...TTGGTGCAGCTTGTTTCTGGAAATGAGAGGCGGCCAGGACCAGTCACCCACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CCA 90 bp AACTTTATTGGGTGTTGGGTTCAGATGAGGTCCATGAGGATGTCGTCCTCCATGGCGCTGCTGACAGCGTaGCAGCAGAAGCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: NFIGCWVQMRSMRMSSSMALLTA*QQKLEL
Trigger: CAGCTCCAGCTTCTGCTGCCACGCTGTCAGCAGCGC...CATGGAGGACGACATCCTCATGGACCTCATCTGAACCCAACACCCAATAAAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR CCA 90 bp TGGTCTCAGGCAATTGGCTCAGTTCAAGTACAGGAATGGCAGAGTCGAGGAAGGAGGTTCCCAGGAACCTaGTACTGTGGTGGGACAGGG +
Preference number: 4 (lower is better)
Translates to: WSQAIGSVQVQEWQSRGRRFPGT*YCGGTG
Trigger: CCCTGTCCCACCACAGTACCAGGTTCCTGGGAACCT...CCTTCCTCGACTCTGCCATTCCTGTACTTGAACTGAGCCAATTGCCTGAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CCA 90 bp CAGGATCAGAAGGTAAGGATTGTGGGAATTTTTCACCCACCACAAGAGGTCTTGTCTGGGGCCGCAGGATaGGTCCAGAAGGAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: QDQKVRIVGIFHPPQEVLSGAAG*VQKEVG
Trigger: GCCCACCTCCTTCTGGACCCATCCTGCGGCCCCAGA...CAAGACCTCTTGTGGTGGGTGAAAAATTCCCACAATCCTTACCTTCTGATCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR TCA 90 bp TCAGGACACTGCTGGGCAGAGGCAAAGGAACCTTGCCATCTTGCAGAATTGCAATGCCATCGAGCCAGGTaGCAAACTCATAGGCACTGC +
Preference number: 4 (lower is better)
Translates to: SGHCWAEAKEPCHLAELQCHRAR*QTHRHC
Trigger: GCAGTGCCTATGAGTTTGTCACCTGGCTCGATGGCA...TTGCAATTCTGCAAGATGGCAAGGTTCCTTTGCCTCTGCCCAGCAGTGTCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR TCA 90 bp AGTGTGGGTGACTGGTCCTGGCCGCCTCTCATTTCCAGAAACAAGCTGCACCAACCAGGTCCTTGTTGGTaGAGTGGAACTGAACCATTC +
Preference number: 4 (lower is better)
Translates to: SVGDWSWPPLISRNKLHQPGPCW*SGTEPF
Trigger: GAATGGTTCAGTTCCACTTCACCAACAAGGACCTGG...TTGGTGCAGCTTGTTTCTGGAAATGAGAGGCGGCCAGGACCAGTCACCCACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR GCA 90 bp ACTCGGTGGGTCTGGCCAATCTGTTCACGCATCTTCTTAAAGTCATCGAACAGCGCAGCAGGTAGTGCTTaGGGAGCTCCTCGAAGTACG +
Preference number: 4 (lower is better)
Translates to: TRWVWPICSRIFLKSSNSAAGSA*GAPRST
Trigger: CGTACTTCGAGGAGCTCCGCAAGCACTACCTGCTGC...GCTGTTCGATGACTTTAAGAAGATGCGTGAACAGATTGGCCAGACCCACCGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207788.2
ENSMUST00000208556.2
CDS-3UTR CCA 90 bp CTTTATTGGGTGTTGGGTTCAGATGAGGTCCATGAGGATGTCGTCCTCCATGACCCTGGAGCAGCTTGCTaGAGAGGGTTGATGGGTGAG +
Preference number: 4 (lower is better)
Translates to: LYWVLGSDEVHEDVVLHDPGAAC*RGLMGE
Trigger: CTCACCCATCAACCCTCTCCAGCAAGCTGCTCCAGG...GTCATGGAGGACGACATCCTCATGGACCTCATCTGAACCCAACACCCAATAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR GCA 90 bp GTACAGGAATGGCAGAGTCGAGGAAGGCGTCATGGTGTTTCTTTGAGCATCTCAACTGCTTGCTTGGTCTaGAGAGAGCCTGAGGTCGAG +
Preference number: 4 (lower is better)
Translates to: VQEWQSRGRRHGVSLSISTACLV*REPEVE
Trigger: CTCGACCTCAGGCTCTCTGCAGACCAAGCAAGCAGT...TGAGATGCTCAAAGAAACACCATGACGCCTTCCTCGACTCTGCCATTCCTGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR GCA 90 bp CTCAGTTCAAGTACAGGAATGGCAGAGTCGAGGAAGGCGTCATGGTGTTTCTTTGGCAAGGGGACTGCTTaGTTGGTCTGCAGAGAGCCT +
Preference number: 4 (lower is better)
Translates to: LSSSTGMAESRKASWCFFGKGTA*LVCREP
Trigger: AGGCTCTCTGCAGACCAAGCAAGCAGTCCCCTTGCC...AAAGAAACACCATGACGCCTTCCTCGACTCTGCCATTCCTGTACTTGAACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CCA 90 bp CTTTATTGGGTGTTGGGTTCAGATGAGGTCCATGAGGATGTCGTCCTCCATGACCAGACTCGGTGGGTCTaGCCAATCTGTTCACGCATC +
Preference number: 4 (lower is better)
Translates to: LYWVLGSDEVHEDVVLHDQTRWV*PICSRI
Trigger: GATGCGTGAACAGATTGGCCAGACCCACCGAGTCTG...GTCATGGAGGACGACATCCTCATGGACCTCATCTGAACCCAACACCCAATAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR CCA 90 bp TGGTCTCAGGCAATTGGCTCAGTTCAAGTACAGGAATGGCAGAGTCGAGGAAGGAGGAGACAGACTCGGTaGGTCTGGCCAATCTGTTCA +
Preference number: 4 (lower is better)
Translates to: WSQAIGSVQVQEWQSRGRRRQTR*VWPICS
Trigger: TGAACAGATTGGCCAGACCCACCGAGTCTGTCTCCT...CCTTCCTCGACTCTGCCATTCCTGTACTTGAACTGAGCCAATTGCCTGAGACCA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CCA 90 bp AACTTTATTGGGTGTTGGGTTCAGATGAGGTCCATGAGGATGTCGTCCTCCATGAGGTTCCCAGGAACCTaGTACTGTGGTGGGACAGGG +
Preference number: 4 (lower is better)
Translates to: NFIGCWVQMRSMRMSSSMRFPGT*YCGGTG
Trigger: CCCTGTCCCACCACAGTACCAGGTTCCTGGGAACCT...CATGGAGGACGACATCCTCATGGACCTCATCTGAACCCAACACCCAATAAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR CCA 90 bp CAGGATCAGAAGGTAAGGATTGTGGGAATTTTTCACCCACCACAAGAGGTCTTGGCAGGACCCCCAAGCTaGGCTGCTGAAGGACCATTG +
Preference number: 4 (lower is better)
Translates to: QDQKVRIVGIFHPPQEVLAGPPS*AAEGPL
Trigger: CAATGGTCCTTCAGCAGCCCAGCTTGGGGGTCCTGC...CAAGACCTCTTGTGGTGGGTGAAAAATTCCCACAATCCTTACCTTCTGATCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR CCA 90 bp TCTCTTGTAATTTTCTTGTGCCTTTTGAGCGGAAGGTTGACACCTGCCCTTCTTACAGCGGACCCAGGGTaGTCAGCAGCTGCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: SLVIFLCLLSGRLTPALLTADPG*SAAAEG
Trigger: TCCCTCAGCAGCTGCTGACCACCCTGGGTCCGCTGT...AAGAAGGGCAGGTGTCAACCTTCCGCTCAAAAGGCACAAGAAAATTACAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CCA 90 bp CTTATGAATTCTGATGTGTTTGCATGCACAGGAGCAAGTCACTTCAAAGTCAGGTCTGGGGCCGCAGGATaGGTCCAGAAGGAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LMNSDVFACTGASHFKVRSGAAG*VQKEVG
Trigger: GCCCACCTCCTTCTGGACCCATCCTGCGGCCCCAGA...CCTGACTTTGAAGTGACTTGCTCCTGTGCATGCAAACACATCAGAATTCATAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CCA 90 bp CAGGATCAGAAGGTAAGGATTGTGGGAATTTTTCACCCACCACAAGAGGTCTTGAGTCTGGGGCGGTGCTaGGTTAAGGAGAAGGCTCCG +
Preference number: 4 (lower is better)
Translates to: QDQKVRIVGIFHPPQEVLSLGRC*VKEKAP
Trigger: CGGAGCCTTCTCCTTAACCCAGCACCGCCCCAGACT...CAAGACCTCTTGTGGTGGGTGAAAAATTCCCACAATCCTTACCTTCTGATCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR GCA 90 bp CAGGATCAGAAGGTAAGGATTGTGGGAATTTTTCACCCACCACAAGAGGTCTTGGGCTTGGGTTTCTCCTaGCACTCGAGGACTCCACTC +
Preference number: 4 (lower is better)
Translates to: QDQKVRIVGIFHPPQEVLGLGFS*HSRTPL
Trigger: GAGTGGAGTCCTCGAGTGGCAGGAGAAACCCAAGCC...CAAGACCTCTTGTGGTGGGTGAAAAATTCCCACAATCCTTACCTTCTGATCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR GCA 90 bp CTTTATTGGGTGTTGGGTTCAGATGAGGTCCATGAGGATGTCGTCCTCCATGACTTCTGCTGCTGGACCTaGTTGTGGTTGGTGATGACC +
Preference number: 4 (lower is better)
Translates to: LYWVLGSDEVHEDVVLHDFCCWT*LWLVMT
Trigger: GGTCATCACCAACCACAAGCAGGTCCAGCAGCAGAA...GTCATGGAGGACGACATCCTCATGGACCTCATCTGAACCCAACACCCAATAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR CCA 90 bp CTTCTTAAAGTCATCGAACAGCTGCAGGGCAGTGCTCAGACCTTCAGCGATGAGTTGTACATAGGACTCTaGAGCGCAGTCCACGGTGTT +
Preference number: 4 (lower is better)
Translates to: LLKVIEQLQGSAQTFSDELYIGL*SAVHGV
Trigger: AACACCGTGGACTGCGCTCCAGAGTCCTATGTACAA...CTCATCGCTGAAGGTCTGAGCACTGCCCTGCAGCTGTTCGATGACTTTAAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208556.2
CDS-3UTR CCA 90 bp CTTTATTGGGTGTTGGGTTCAGATGAGGTCCATGAGGATGTCGTCCTCCATGACGAGACCTCGTCAGCTTaGTGTTGGCATCCACAGATG +
Preference number: 4 (lower is better)
Translates to: LYWVLGSDEVHEDVVLHDETSSA*CWHPQM
Trigger: CATCTGTGGATGCCAACACCAAGCTGACGAGGTCTC...GTCATGGAGGACGACATCCTCATGGACCTCATCTGAACCCAACACCCAATAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR TCA 90 bp TCTCTTGTAATTTTCTTGTGCCTTTTGAGCGGAAGGTTGACACCTGCCCTTCTTCAGGAGGTACGGGGGTaGGTTGCAGATGAGGAGACA +
Preference number: 4 (lower is better)
Translates to: SLVIFLCLLSGRLTPALLQEVRG*VADEET
Trigger: TGTCTCCTCATCTGCAACTCACCCCCGTACCTCCTG...AAGAAGGGCAGGTGTCAACCTTCCGCTCAAAAGGCACAAGAAAATTACAAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR TCA 90 bp AACTTTATTGGGTGTTGGGTTCAGATGAGGTCCATGAGGATGTCGTCCTCCATGGAACTGAACCATTCTTaGGTTCCGGAACAGCGGACC +
Preference number: 4 (lower is better)
Translates to: NFIGCWVQMRSMRMSSSMELNHS*VPEQRT
Trigger: GGTCCGCTGTTCCGGAACTCAAGAATGGTTCAGTTC...CATGGAGGACGACATCCTCATGGACCTCATCTGAACCCAACACCCAATAAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR TCA 90 bp TCTCTTGTAATTTTCTTGTGCCTTTTGAGCGGAAGGTTGACACCTGCCCTTCTTTGCGGTAGAGGCCTTTaGGGGACTCCAGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SLVIFLCLLSGRLTPALLCGRGL*GTPGPC
Trigger: ACAAGGACCTGGAGTCCCTCAAAGGCCTCTACCGCA...AAGAAGGGCAGGTGTCAACCTTCCGCTCAAAAGGCACAAGAAAATTACAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR GCA 90 bp GTACAGGAATGGCAGAGTCGAGGAAGGCGTCATGGTGTTTCTTTGAGCATCTCAGGCACTGCTGGTAGGTaGGTGACATTGTACATAGGA +
Preference number: 4 (lower is better)
Translates to: VQEWQSRGRRHGVSLSISGTAGR*VTLYIG
Trigger: TCCTATGTACAATGTCACGCACCTACCAGCAGTGCC...TGAGATGCTCAAAGAAACACCATGACGCCTTCCTCGACTCTGCCATTCCTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR GCA 90 bp AAGGATTGTGGGAATTTTTCACCCACCACAAGAGGTCTTGCTCTTATAGCTGAAAGCCTGAGGTCGAGCTaGCACCAACAGGCAGCACGA +
Preference number: 4 (lower is better)
Translates to: KDCGNFSPTTRGLALIAESLRSS*HQQAAR
Trigger: TCGTGCTGCCTGTTGGTGGCAGCTCGACCTCAGGCT...TTCAGCTATAAGAGCAAGACCTCTTGTGGTGGGTGAAAAATTCCCACAATCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR CCA 90 bp CTTATGAATTCTGATGTGTTTGCATGCACAGGAGCAAGTCACTTCAAAGTCAGGTGTGTGGGCCATGACTaGGCAGGTGGAGGATGCAGG +
Preference number: 4 (lower is better)
Translates to: LMNSDVFACTGASHFKVRCVGHD*AGGGCR
Trigger: CCTGCATCCTCCACCTGCCCAGTCATGGCCCACACA...CCTGACTTTGAAGTGACTTGCTCCTGTGCATGCAAACACATCAGAATTCATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CCA 90 bp AAGGATTGTGGGAATTTTTCACCCACCACAAGAGGTCTTGCTCTTATAGCTGAATGTGTGGGCCATGACTaGGCAGGTGGAGGATGCAGG +
Preference number: 4 (lower is better)
Translates to: KDCGNFSPTTRGLALIAECVGHD*AGGGCR
Trigger: CCTGCATCCTCCACCTGCCCAGTCATGGCCCACACA...TTCAGCTATAAGAGCAAGACCTCTTGTGGTGGGTGAAAAATTCCCACAATCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
3UTR CAA 72 bp CAGTTCAGATTTCCTGCATGTCCTGGTCTCAGGCAATaGGCTCAGTTCAAGTACAGGAATGGCAGAGTCGAG +
Preference number: 4 (lower is better)
Translates to: QFRFPACPGLRQ*AQFKYRNGRVE
Trigger: CTCGACTCTGCCATTCCTGTACTTGAACTGAGCCAATTGCCTGAGACCAGGACATGCAGGAAATCTGAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR TCA 90 bp AAGGATTGTGGGAATTTTTCACCCACCACAAGAGGTCTTGCTCTTATAGCTGAATGCGGTAGAGGCCTTTaGGGGACTCCAGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: KDCGNFSPTTRGLALIAECGRGL*GTPGPC
Trigger: ACAAGGACCTGGAGTCCCTCAAAGGCCTCTACCGCA...TTCAGCTATAAGAGCAAGACCTCTTGTGGTGGGTGAAAAATTCCCACAATCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR GCA 90 bp TCTCTTGTAATTTTCTTGTGCCTTTTGAGCGGAAGGTTGACACCTGCCCTTCTTACGTCTGCTGGTTGCTaGAAAGGCTCCAGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: SLVIFLCLLSGRLTPALLTSAGC*KGSSRA
Trigger: TGCCCTACTGGAGCCTTTGCAGCAACCAGCAGACGT...AAGAAGGGCAGGTGTCAACCTTCCGCTCAAAAGGCACAAGAAAATTACAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CCA 90 bp CTCAGTTCAAGTACAGGAATGGCAGAGTCGAGGAAGGCGTCATGGTGTTTCTTTTTGTACATAGGACTCTaGAGCGCAGTCCACGGTGTT +
Preference number: 4 (lower is better)
Translates to: LSSSTGMAESRKASWCFFLYIGL*SAVHGV
Trigger: AACACCGTGGACTGCGCTCCAGAGTCCTATGTACAA...AAAGAAACACCATGACGCCTTCCTCGACTCTGCCATTCCTGTACTTGAACTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CCA 90 bp CTTATGAATTCTGATGTGTTTGCATGCACAGGAGCAAGTCACTTCAAAGTCAGGCCTGGAGCAGCTTGCTaGAGAGGGTTGATGGGTGAG +
Preference number: 4 (lower is better)
Translates to: LMNSDVFACTGASHFKVRPGAAC*RGLMGE
Trigger: CTCACCCATCAACCCTCTCCAGCAAGCTGCTCCAGG...CCTGACTTTGAAGTGACTTGCTCCTGTGCATGCAAACACATCAGAATTCATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CCA 90 bp GGCTCTGCACACTTTGAAATGAACCAAACATACCAGTTCAGATTTCCTGCATGTACCATTGACCCCACCTaGGGTTACAGTGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GSAHFEMNQTYQFRFPACTIDPT*GYSACQ
Trigger: CTGGCAGGCACTGTAACCCCAGGTGGGGTCAATGGT...ACATGCAGGAAATCTGAACTGGTATGTTTGGTTCATTTCAAAGTGTGCAGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CCA 90 bp CTTATGAATTCTGATGTGTTTGCATGCACAGGAGCAAGTCACTTCAAAGTCAGGCATGCTCTGATGTGGTaGCAGCAATGTAGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: LMNSDVFACTGASHFKVRHALMW*QQCRGP
Trigger: GGGGCCCCTACATTGCTGCCACCACATCAGAGCATG...CCTGACTTTGAAGTGACTTGCTCCTGTGCATGCAAACACATCAGAATTCATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
3UTR CAA 72 bp TCTCTTGTAATTTTCTTGTGCCTTTTGAGCGGAAGGTaGACACCTGCCCTTCTTCACCCAGATGTCGGTGCT +
Preference number: 4 (lower is better)
Translates to: SLVIFLCLLSGR*TPALLHPDVGA
Trigger: AGCACCGACATCTGGGTGAAGAAGGGCAGGTGTCAACCTTCCGCTCAAAAGGCACAAGAAAATTACAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR GCA 90 bp AAGGATTGTGGGAATTTTTCACCCACCACAAGAGGTCTTGCTCTTATAGCTGAAACTGCTTGCTTGGTCTaGAGAGAGCCTGAGGTCGAG +
Preference number: 4 (lower is better)
Translates to: KDCGNFSPTTRGLALIAETACLV*REPEVE
Trigger: CTCGACCTCAGGCTCTCTGCAGACCAAGCAAGCAGT...TTCAGCTATAAGAGCAAGACCTCTTGTGGTGGGTGAAAAATTCCCACAATCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR CCA 90 bp AAGGATTGTGGGAATTTTTCACCCACCACAAGAGGTCTTGCTCTTATAGCTGAATCCAGCTTCTGCTGCTaGACCTGCTTGTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: KDCGNFSPTTRGLALIAESSFCC*TCLWLV
Trigger: CACCAACCACAAGCAGGTCCAGCAGCAGAAGCTGGA...TTCAGCTATAAGAGCAAGACCTCTTGTGGTGGGTGAAAAATTCCCACAATCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS CCA 90 bp CTGGAGCACCCTTACCTGGCAGTGGCGCCCGCTGGGGAAGCTGTGTaGGCCATGACTGGGCAGGTGGAGGATGCAGGAGCTGCGGCCCCA +
Preference number: 5 (lower is better)
Translates to: LEHPYLAVAPAGEAV*AMTGQVEDAGAAAP
Trigger: TGGGGCCGCAGCTCCTGCATCCTCCACCTGCCCAGTCATGGCCCACACAGCTTCCCCAGCGGGCGCCACTGCCAGGTAAGGGTGCTCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS CCA 90 bp TCAGCAGCATCTGACCTGGCAGTGGCGCCCGCTGGGGAAGCTGTGTaGGCCATGACTGGGCAGGTGGAGGATGCAGGAGCTGCGGCCCCA +
Preference number: 5 (lower is better)
Translates to: SAASDLAVAPAGEAV*AMTGQVEDAGAAAP
Trigger: TGGGGCCGCAGCTCCTGCATCCTCCACCTGCCCAGTCATGGCCCACACAGCTTCCCCAGCGGGCGCCACTGCCAGGTCAGATGCTGCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000003049.8
ENSMUST00000207278.2
CDS CCA 90 bp CCCCTATCCTCCCCTGGAGCACCCTTACCTGGCAGTGGCGCCCGCTaGGGAAGCTGTGTGGGCCATGACTGGGCAGGTGGAGGATGCAGG +
Preference number: 5 (lower is better)
Translates to: PLSSPGAPLPGSGAR*GSCVGHDWAGGGCR
Trigger: CCTGCATCCTCCACCTGCCCAGTCATGGCCCACACAGCTTCCCCAGCGGGCGCCACTGCCAGGTAAGGGTGCTCCAGGGGAGGATAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS CCA 90 bp CCCTGTAGCCGCAGAAGCTCCCACGGCACCCTGAGGCTGAGGCTGTaGTGCACGGAGCCCGCGCTGTTGCTCCAGCTTCTGCTGCTGGAC +
Preference number: 5 (lower is better)
Translates to: PCSRRSSHGTLRLRL*CTEPALLLQLLLLD
Trigger: GTCCAGCAGCAGAAGCTGGAGCAACAGCGCGGGCTCCGTGCACCACAGCCTCAGCCTCAGGGTGCCGTGGGAGCTTCTGCGGCTACAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207848.3
CDS GCA 90 bp TGTAGCCGCAGAAGCTCCCACGGCACCCTGAGGCTGAGGCTGTGGTaGACGGAGCCCGCGCTGTTGCTCCAGCTTCTGCTGCTGGACCTG +
Preference number: 5 (lower is better)
Translates to: CSRRSSHGTLRLRLW*TEPALLLQLLLLDL
Trigger: CAGGTCCAGCAGCAGAAGCTGGAGCAACAGCGCGGGCTCCGTGCACCACAGCCTCAGCCTCAGGGTGCCGTGGGAGCTTCTGCGGCTACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207848.3
CDS CCA 90 bp TCTTTCGTTTGGCCACTGGCAGTGGCGCCCGCTGGGGAAGCTGTGTaGGCCATGACTGGGCAGGTGGAGGATGCAGGAGCTGCGGCCCCA +
Preference number: 5 (lower is better)
Translates to: SFVWPLAVAPAGEAV*AMTGQVEDAGAAAP
Trigger: TGGGGCCGCAGCTCCTGCATCCTCCACCTGCCCAGTCATGGCCCACACAGCTTCCCCAGCGGGCGCCACTGCCAGTGGCCAAACGAAAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS CCA 90 bp CCCTCTCCTTCTCTCTTTCGTTTGGCCACTGGCAGTGGCGCCCGCTaGGGAAGCTGTGTGGGCCATGACTGGGCAGGTGGAGGATGCAGG +
Preference number: 5 (lower is better)
Translates to: PSPSLFRLATGSGAR*GSCVGHDWAGGGCR
Trigger: CCTGCATCCTCCACCTGCCCAGTCATGGCCCACACAGCTTCCCCAGCGGGCGCCACTGCCAGTGGCCAAACGAAAGAGAGAAGGAGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CAA 90 bp CAGATGAGGTCCATGAGGATGTCGTCCTCCATGACGCTGGGCTGCAGGCCCGGCCCGGCCTTCTGGCTCTaGGCAGCCTCCACAGCATTC +
Preference number: 5 (lower is better)
Translates to: QMRSMRMSSSMTLGCRPGPAFWL*AASTAF
Trigger: GAATGCTGTGGAGGCTGCCAAGAGCCAGAAGGCCGG...GCCGGGCCTGCAGCCCAGCGTCATGGAGGACGACATCCTCATGGACCTCATCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS GCA 90 bp CAGCAGGTAGTGCTTGCGGAGCTCCTCGAAGTACGGCCCCAGGTTTaGTGTCCCCTCGATCACAAACACCACATCGGCGACCAGGCCCCC +
Preference number: 5 (lower is better)
Translates to: QQVVLAELLEVRPQV*CPLDHKHHIGDQAP
Trigger: GGGGGCCTGGTCGCCGATGTGGTGTTTGTGATCGAGGGGACAGCAAACCTGGGGCCGTACTTCGAGGAGCTCCGCAAGCACTACCTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000003049.8
ENSMUST00000207654.2
ENSMUST00000207788.2
ENSMUST00000208253.2
ENSMUST00000208551.2
ENSMUST00000208556.2
CDS GCA 90 bp GCAGCAGAAGCTGGAGCTGGTGGCAAGGGGACTGCTTGCTTGGTCTaGAGAGAGCCTGAGGTCGAGCTGCCACCAACAGGCAGCACGAGC +
Preference number: 5 (lower is better)
Translates to: AAEAGAGGKGTACLV*REPEVELPPTGSTS
Trigger: GCTCGTGCTGCCTGTTGGTGGCAGCTCGACCTCAGGCTCTCTGCAGACCAAGCAAGCAGTCCCCTTGCCACCAGCTCCAGCTTCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000003049.8
ENSMUST00000207278.2
ENSMUST00000207654.2
ENSMUST00000208253.2
ENSMUST00000208551.2
CDS-3UTR CAA 90 bp GTGTTTGCATGCACAGGAGCAAGTCACTTCAAAGTCAGGGGCTGGCTTGGTGCCGGCCTGGGTAGCACCTaGGGGCTGGGGCTGCCCTGT +
Preference number: 5 (lower is better)
Translates to: VFACTGASHFKVRGWLGAGLGST*GLGLPC
Trigger: ACAGGGCAGCCCCAGCCCCAAGGTGCTACCCAGGCC...GGCACCAAGCCAGCCCCTGACTTTGAAGTGACTTGCTCCTGTGCATGCAAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS TCA 90 bp ACACCACAAGGCTGTACTGGGTTCCACCATACGGCTTCCATCCCGTaGCTCGGCCGCGCACTCACGTCTCCCCCAAAGTCCGTCTCTGCA +
Preference number: 5 (lower is better)
Translates to: TPQGCTGFHHTASIP*LGRALTSPPKSVSA
Trigger: TGCAGAGACGGACTTTGGGGGAGACGTGAGTGCGCGGCCGAGTCACGGGATGGAAGCCGTATGGTGGAACCCAGTACAGCCTTGTGGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208556.2
CDS CCA 90 bp GACTCTGGAGCGCAGTCCACGGTGTTGAACACCACAAGGCTGTACTaGGTTCCACCATACGGCTTCCATCCCGTGACTCGGCCGCGCACT +
Preference number: 5 (lower is better)
Translates to: DSGAQSTVLNTTRLY*VPPYGFHPVTRPRT
Trigger: AGTGCGCGGCCGAGTCACGGGATGGAAGCCGTATGGTGGAACCCAGTACAGCCTTGTGGTGTTCAACACCGTGGACTGCGCTCCAGAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208556.2
CDS-3UTR CAA 90 bp CACAGTGTGGGTGACTGGTCCTGGCCGCCTCTCATTTCCAGAAACAAGCTGCACCCCCATCCCGCGCTGTaGCTCCAGCTTCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: HSVGDWSWPPLISRNKLHPHPAL*LQLLLL
Trigger: CAGCAGCAGAAGCTGGAGCAACAGCGCGGGATGGGG...GTGCAGCTTGTTTCTGGAAATGAGAGGCGGCCAGGACCAGTCACCCACACTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CAA 90 bp CCTGGGCCTCTCATCCCACTTCCTCTGGGAACCCAAGGCAGTAAGGTTTCTAGGCCCCATCCCGCGCTGTaGCTCCAGCTTCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: PGPLIPLPLGTQGSKVSRPHPAL*LQLLLL
Trigger: CAGCAGCAGAAGCTGGAGCAACAGCGCGGGATGGGG...CCTAGAAACCTTACTGCCTTGGGTTCCCAGAGGAAGTGGGATGAGAGGCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR CAA 90 bp CTCTCATCCCACTTCCTCTGGGAACCCAAGGCAGTAAGGTTTCTAGGAAGCTCCGGCCTGGGTAGCACCTaGGGGCTGGGGCTGCCCTGT +
Preference number: 5 (lower is better)
Translates to: LSSHFLWEPKAVRFLGSSGLGST*GLGLPC
Trigger: ACAGGGCAGCCCCAGCCCCAAGGTGCTACCCAGGCC...GGAGCTTCCTAGAAACCTTACTGCCTTGGGTTCCCAGAGGAAGTGGGATGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR CAA 90 bp GAGGTATGGAACAGCCCCCATGATGGACAGCCTGGTCACCATGATGGGACTGTAAGGCAGGAGGTGGCTTaGGAGCTCCAGGGGGCACAG +
Preference number: 5 (lower is better)
Translates to: EVWNSPHDGQPGHHDGTVRQEVA*ELQGAQ
Trigger: CTGTGCCCCCTGGAGCTCCAAAGCCACCTCCTGCCT...TACAGTCCCATCATGGTGACCAGGCTGTCCATCATGGGGGCTGTTCCATACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CAA 90 bp TGGGTTCAGATGAGGTCCATGAGGATGTCGTCCTCCATGACGCTGGGCTGCAGGAGTACGGCCCCAGGTTaGCTGTCCCCTCGATCACAA +
Preference number: 5 (lower is better)
Translates to: WVQMRSMRMSSSMTLGCRSTAPG*LSPRSQ
Trigger: TTGTGATCGAGGGGACAGCAAACCTGGGGCCGTACT...CCTGCAGCCCAGCGTCATGGAGGACGACATCCTCATGGACCTCATCTGAACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR CAA 90 bp GGTCCTGGCCGCCTCTCATTTCCAGAAACAAGCTGCACCAAAGGCAGGCAGTCCGCGCAGTCCACGGTGTaGAACACCACAAGGCTGTAC +
Preference number: 5 (lower is better)
Translates to: GPGRLSFPETSCTKGRQSAQSTV*NTTRLY
Trigger: GTACAGCCTTGTGGTGTTCAACACCGTGGACTGCGC...GGACTGCCTGCCTTTGGTGCAGCTTGTTTCTGGAAATGAGAGGCGGCCAGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CAA 90 bp TGGGTTCAGATGAGGTCCATGAGGATGTCGTCCTCCATGACGCTGGGCTGCAGGTCCACAGATGCAGGCTaGGGTTTCTCCTGCCACTCG +
Preference number: 5 (lower is better)
Translates to: WVQMRSMRMSSSMTLGCRSTDAG*GFSCHS
Trigger: CGAGTGGCAGGAGAAACCCAAGCCTGCATCTGTGGA...CCTGCAGCCCAGCGTCATGGAGGACGACATCCTCATGGACCTCATCTGAACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS CCA 90 bp GGTTCACATAGACCTGGCAAGGCAGAGACCTCGTCAGCTTGGTGTTaGCATCCACAGATGCAGGCTTGGGTTTCTCCTGCCACTCGAGGA +
Preference number: 5 (lower is better)
Translates to: GSHRPGKAETSSAWC*HPQMQAWVSPATRG
Trigger: TCCTCGAGTGGCAGGAGAAACCCAAGCCTGCATCTGTGGATGCCAACACCAAGCTGACGAGGTCTCTGCCTTGCCAGGTCTATGTGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000003049.8
ENSMUST00000207278.2
ENSMUST00000207654.2
ENSMUST00000207848.3
ENSMUST00000208253.2
ENSMUST00000208551.2
ENSMUST00000209191.2
CDS-3UTR CAA 90 bp GAGGTATGGAACAGCCCCCATGATGGACAGCCTGGTCACCATGATGGGACTGTAAGTACGGCCCCAGGTTaGCTGTCCCCTCGATCACAA +
Preference number: 5 (lower is better)
Translates to: EVWNSPHDGQPGHHDGTVSTAPG*LSPRSQ
Trigger: TTGTGATCGAGGGGACAGCAAACCTGGGGCCGTACT...TACAGTCCCATCATGGTGACCAGGCTGTCCATCATGGGGGCTGTTCCATACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CAA 90 bp CACAGTGTGGGTGACTGGTCCTGGCCGCCTCTCATTTCCAGAAACAAGCTGCACCAGGCTAGGAGCTTGTaGGATACTGACTGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: HSVGDWSWPPLISRNKLHQARSL*DTDCCP
Trigger: TGGGCAGCAGTCAGTATCCAACAAGCTCCTAGCCTG...GTGCAGCTTGTTTCTGGAAATGAGAGGCGGCCAGGACCAGTCACCCACACTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CAA 90 bp GAGGTATGGAACAGCCCCCATGATGGACAGCCTGGTCACCATGATGGGACTGTACTCGTCAGCTTGGTGTaGGCATCCACAGATGCAGGC +
Preference number: 5 (lower is better)
Translates to: EVWNSPHDGQPGHHDGTVLVSLV*ASTDAG
Trigger: GCCTGCATCTGTGGATGCCAACACCAAGCTGACGAG...TACAGTCCCATCATGGTGACCAGGCTGTCCATCATGGGGGCTGTTCCATACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CAA 90 bp CTCAGTTCAAGTACAGGAATGGCAGAGTCGAGGAAGGCGTCATGGTGTTTCTTTTGCTCCAGGAGGACCTaGAGGTGCGCCTGTGGGGGC +
Preference number: 5 (lower is better)
Translates to: LSSSTGMAESRKASWCFFCSRRT*RCACGG
Trigger: GCCCCCACAGGCGCACCTCAAGGTCCTCCTGGAGCA...AAAGAAACACCATGACGCCTTCCTCGACTCTGCCATTCCTGTACTTGAACTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS CCA 90 bp CTCCATGGTTCACATAGACCTGGCAAGGCAGAGACCTCGTCAGCTTaGTGTTGGCATCCACAGATGCAGGCTTGGGTTTCTCCTGCCACT +
Preference number: 5 (lower is better)
Translates to: LHGSHRPGKAETSSA*CWHPQMQAWVSPAT
Trigger: AGTGGCAGGAGAAACCCAAGCCTGCATCTGTGGATGCCAACACCAAGCTGACGAGGTCTCTGCCTTGCCAGGTCTATGTGAACCATGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000003049.8
ENSMUST00000207278.2
ENSMUST00000207654.2
ENSMUST00000207848.3
ENSMUST00000208253.2
ENSMUST00000208551.2
ENSMUST00000209191.2
CDS-3UTR CAA 90 bp CGCATCTTCTTAAAGTCATCGAACAGCTGCAGGGCAGTGCTCAGACCTTCAGCGAGTACGGCCCCAGGTTaGCTGTCCCCTCGATCACAA +
Preference number: 5 (lower is better)
Translates to: RIFLKSSNSCRAVLRPSASTAPG*LSPRSQ
Trigger: TTGTGATCGAGGGGACAGCAAACCTGGGGCCGTACT...CGCTGAAGGTCTGAGCACTGCCCTGCAGCTGTTCGATGACTTTAAGAAGATGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207788.2
ENSMUST00000208556.2
CDS-3UTR CAA 90 bp CAGGATCAGAAGGTAAGGATTGTGGGAATTTTTCACCCACCACAAGAGGTCTTGTGCTCCAGGAGGACCTaGAGGTGCGCCTGTGGGGGC +
Preference number: 5 (lower is better)
Translates to: QDQKVRIVGIFHPPQEVLCSRRT*RCACGG
Trigger: GCCCCCACAGGCGCACCTCAAGGTCCTCCTGGAGCA...CAAGACCTCTTGTGGTGGGTGAAAAATTCCCACAATCCTTACCTTCTGATCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS TCA 90 bp GTGCGTGACATTGTACATAGGACTCTGGAGCGCAGTCCACGGTGTTaGACACCACAAGGCTGTACTGGGTTCCACCATAGTCTCCCCCAA +
Preference number: 5 (lower is better)
Translates to: VRDIVHRTLERSPRC*TPQGCTGFHHSLPQ
Trigger: TTGGGGGAGACTATGGTGGAACCCAGTACAGCCTTGTGGTGTTCAACACCGTGGACTGCGCTCCAGAGTCCTATGTACAATGTCACGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000003049.8
ENSMUST00000207654.2
ENSMUST00000208253.2
ENSMUST00000208551.2
CDS TCA 90 bp GTGCGTGACATTGTACATAGGACTCTGGAGCGCAGTCCACGGTGTTaGACACCACAAGGCTGTACTGGGTTCCACCATACGGCTTCCATC +
Preference number: 5 (lower is better)
Translates to: VRDIVHRTLERSPRC*TPQGCTGFHHTASI
Trigger: GATGGAAGCCGTATGGTGGAACCCAGTACAGCCTTGTGGTGTTCAACACCGTGGACTGCGCTCCAGAGTCCTATGTACAATGTCACGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208556.2
CDS GCA 90 bp GATGCCATCGAGCCAGGTGACAAACTCATAGGCACTGCTGGTAGGTaGGTGACATTGTACATAGGACTCTGGAGCGCAGTCCACGGTGTT +
Preference number: 5 (lower is better)
Translates to: DAIEPGDKLIGTAGR*VTLYIGLWSAVHGV
Trigger: AACACCGTGGACTGCGCTCCAGAGTCCTATGTACAATGTCACGCACCTACCAGCAGTGCCTATGAGTTTGTCACCTGGCTCGATGGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000003049.8
ENSMUST00000207654.2
ENSMUST00000208253.2
ENSMUST00000208551.2
CDS CCA 90 bp CTCATAGGCACTGCTGGTAGGTGCGTGACATTGTACATAGGACTCTaGAGCGCAGTCCACGGTGTTGAACACCACAAGGCTGTACTGGGT +
Preference number: 5 (lower is better)
Translates to: LIGTAGRCVTLYIGL*SAVHGVEHHKAVLG
Trigger: ACCCAGTACAGCCTTGTGGTGTTCAACACCGTGGACTGCGCTCCAGAGTCCTATGTACAATGTCACGCACCTACCAGCAGTGCCTATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000003049.8
ENSMUST00000207654.2
ENSMUST00000208253.2
ENSMUST00000208551.2
CDS-3UTR CAA 90 bp ACGCATCTTCTTAAAGTCATCGAACAGCTGCAGGGCAGTGCTCAGACCTTCAGCAGTACGGCCCCAGGTTaGCTGTCCCCTCGATCACAA +
Preference number: 5 (lower is better)
Translates to: THLLKVIEQLQGSAQTFSSTAPG*LSPRSQ
Trigger: TTGTGATCGAGGGGACAGCAAACCTGGGGCCGTACT...GCTGAAGGTCTGAGCACTGCCCTGCAGCTGTTCGATGACTTTAAGAAGATGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207788.2
ENSMUST00000208556.2
CDS TCA 90 bp TCAGCGATGAGACTACAGCTCTCGCCACCACCGCCCATGAACATCTaGCCAAATGTGGTGGAATCCTCATATGCACCATCCCTGATGTGC +
Preference number: 5 (lower is better)
Translates to: SAMRLQLSPPPPMNI*PNVVESSYAPSLMC
Trigger: GCACATCAGGGATGGTGCATATGAGGATTCCACCACATTTGGTCAGATGTTCATGGGCGGTGGTGGCGAGAGCTGTAGTCTCATCGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207490.2
ENSMUST00000207654.2
CDS-3UTR CAA 90 bp AACTTTATTGGGTGTTGGGTTCAGATGAGGTCCATGAGGATGTCGTCCTCCATGCACTCCTGGAGCAGCTaGCTGGAGAGGGTTGATGGG +
Preference number: 5 (lower is better)
Translates to: NFIGCWVQMRSMRMSSSMHSWSS*LERVDG
Trigger: CCCATCAACCCTCTCCAGCAAGCTGCTCCAGGAGTG...CATGGAGGACGACATCCTCATGGACCTCATCTGAACCCAACACCCAATAAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR CAA 90 bp TGGTCTCAGGCAATTGGCTCAGTTCAAGTACAGGAATGGCAGAGTCGAGGAAGGCTCCAGGCTAGGAGCTaGTTGGATACTGACTGCTGC +
Preference number: 5 (lower is better)
Translates to: WSQAIGSVQVQEWQSRGRLQARS*LDTDCC
Trigger: GCAGCAGTCAGTATCCAACAAGCTCCTAGCCTGGAG...CCTTCCTCGACTCTGCCATTCCTGTACTTGAACTGAGCCAATTGCCTGAGACCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CAA 90 bp CTCTCATCCCACTTCCTCTGGGAACCCAAGGCAGTAAGGTTTCTAGGAAGCTCCAGAGACCTCGTCAGCTaGGTGTTGGCATCCACAGAT +
Preference number: 5 (lower is better)
Translates to: LSSHFLWEPKAVRFLGSSRDLVS*VLASTD
Trigger: ATCTGTGGATGCCAACACCAAGCTGACGAGGTCTCT...GGAGCTTCCTAGAAACCTTACTGCCTTGGGTTCCCAGAGGAAGTGGGATGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR CAA 90 bp CTTTATTGGGTGTTGGGTTCAGATGAGGTCCATGAGGATGTCGTCCTCCATGACTGGACCTGCTTGTGGTaGGTGATGACCTGGCGGATG +
Preference number: 5 (lower is better)
Translates to: LYWVLGSDEVHEDVVLHDWTCLW*VMTWRM
Trigger: CATCCGCCAGGTCATCACCAACCACAAGCAGGTCCA...GTCATGGAGGACGACATCCTCATGGACCTCATCTGAACCCAACACCCAATAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR CAA 90 bp GTACAGGAATGGCAGAGTCGAGGAAGGCGTCATGGTGTTTCTTTGAGCATCTCAAGGTACGGGGGTGAGTaGCAGATGAGGAGACAGACT +
Preference number: 5 (lower is better)
Translates to: VQEWQSRGRRHGVSLSISRYGGE*QMRRQT
Trigger: AGTCTGTCTCCTCATCTGCAACTCACCCCCGTACCT...TGAGATGCTCAAAGAAACACCATGACGCCTTCCTCGACTCTGCCATTCCTGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CAA 90 bp AAGGATTGTGGGAATTTTTCACCCACCACAAGAGGTCTTGCTCTTATAGCTGAAAGGCAGGAGGTGGCTTaGGAGCTCCAGGGGGCACAG +
Preference number: 5 (lower is better)
Translates to: KDCGNFSPTTRGLALIAERQEVA*ELQGAQ
Trigger: CTGTGCCCCCTGGAGCTCCAAAGCCACCTCCTGCCT...TTCAGCTATAAGAGCAAGACCTCTTGTGGTGGGTGAAAAATTCCCACAATCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR CAA 90 bp CTTTATTGGGTGTTGGGTTCAGATGAGGTCCATGAGGATGTCGTCCTCCATGACCTCCAGGCTAGGAGCTaGTTGGATACTGACTGCTGC +
Preference number: 5 (lower is better)
Translates to: LYWVLGSDEVHEDVVLHDLQARS*LDTDCC
Trigger: GCAGCAGTCAGTATCCAACAAGCTCCTAGCCTGGAG...GTCATGGAGGACGACATCCTCATGGACCTCATCTGAACCCAACACCCAATAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR CAA 90 bp CTCAGTTCAAGTACAGGAATGGCAGAGTCGAGGAAGGCGTCATGGTGTTTCTTTTCCACAGATGCAGGCTaGGGTTTCTCCTGCCACTCG +
Preference number: 5 (lower is better)
Translates to: LSSSTGMAESRKASWCFFSTDAG*GFSCHS
Trigger: CGAGTGGCAGGAGAAACCCAAGCCTGCATCTGTGGA...AAAGAAACACCATGACGCCTTCCTCGACTCTGCCATTCCTGTACTTGAACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CAA 90 bp TCCAGGGAACCAGGGCACGGCTCTGCACACTTTGAAATGAACCAAACATACCAGAGAGACCTCGTCAGCTaGGTGTTGGCATCCACAGAT +
Preference number: 5 (lower is better)
Translates to: SREPGHGSAHFEMNQTYQRDLVS*VLASTD
Trigger: ATCTGTGGATGCCAACACCAAGCTGACGAGGTCTCT...CTGGTATGTTTGGTTCATTTCAAAGTGTGCAGAGCCGTGCCCTGGTTCCCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CAA 90 bp CTTATGAATTCTGATGTGTTTGCATGCACAGGAGCAAGTCACTTCAAAGTCAGGCCGGCCTTCTGGCTCTaGGCAGCCTCCACAGCATTC +
Preference number: 5 (lower is better)
Translates to: LMNSDVFACTGASHFKVRPAFWL*AASTAF
Trigger: GAATGCTGTGGAGGCTGCCAAGAGCCAGAAGGCCGG...CCTGACTTTGAAGTGACTTGCTCCTGTGCATGCAAACACATCAGAATTCATAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CAA 90 bp AACTTTATTGGGTGTTGGGTTCAGATGAGGTCCATGAGGATGTCGTCCTCCATGCAGGCTAGGAGCTTGTaGGATACTGACTGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: NFIGCWVQMRSMRMSSSMQARSL*DTDCCP
Trigger: TGGGCAGCAGTCAGTATCCAACAAGCTCCTAGCCTG...CATGGAGGACGACATCCTCATGGACCTCATCTGAACCCAACACCCAATAAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR CAA 90 bp CAGGATCAGAAGGTAAGGATTGTGGGAATTTTTCACCCACCACAAGAGGTCTTGCTCGTCAGCTTGGTGTaGGCATCCACAGATGCAGGC +
Preference number: 5 (lower is better)
Translates to: QDQKVRIVGIFHPPQEVLLVSLV*ASTDAG
Trigger: GCCTGCATCTGTGGATGCCAACACCAAGCTGACGAG...CAAGACCTCTTGTGGTGGGTGAAAAATTCCCACAATCCTTACCTTCTGATCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS-3UTR CAA 90 bp CTTATGAATTCTGATGTGTTTGCATGCACAGGAGCAAGTCACTTCAAAGTCAGGCACTCCTGGAGCAGCTaGCTGGAGAGGGTTGATGGG +
Preference number: 5 (lower is better)
Translates to: LMNSDVFACTGASHFKVRHSWSS*LERVDG
Trigger: CCCATCAACCCTCTCCAGCAAGCTGCTCCAGGAGTG...CCTGACTTTGAAGTGACTTGCTCCTGTGCATGCAAACACATCAGAATTCATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CAA 90 bp GGCTCTGCACACTTTGAAATGAACCAAACATACCAGTTCAGATTTCCTGCATGTTGGACCTGCTTGTGGTaGGTGATGACCTGGCGGATG +
Preference number: 5 (lower is better)
Translates to: GSAHFEMNQTYQFRFPACWTCLW*VMTWRM
Trigger: CATCCGCCAGGTCATCACCAACCACAAGCAGGTCCA...ACATGCAGGAAATCTGAACTGGTATGTTTGGTTCATTTCAAAGTGTGCAGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS-3UTR CAA 90 bp AAGGATTGTGGGAATTTTTCACCCACCACAAGAGGTCTTGCTCTTATAGCTGAAAGGTACGGGGGTGAGTaGCAGATGAGGAGACAGACT +
Preference number: 5 (lower is better)
Translates to: KDCGNFSPTTRGLALIAERYGGE*QMRRQT
Trigger: AGTCTGTCTCCTCATCTGCAACTCACCCCCGTACCT...TTCAGCTATAAGAGCAAGACCTCTTGTGGTGGGTGAAAAATTCCCACAATCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS CCA 72 bp AGTGGCGCCCGCTGGGGAAGCTGTGTGGGCCATGACTaGGCAGGTGGAGGATGCAGGAGCTGCGGCCCCAGC +
Preference number: 6 (lower is better)
Translates to: SGARWGSCVGHD*AGGGCRSCGPS
Trigger: GCTGGGGCCGCAGCTCCTGCATCCTCCACCTGCCCAGTCATGGCCCACACAGCTTCCCCAGCGGGCGCCACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000003049.8
ENSMUST00000207278.2
ENSMUST00000208253.2
ENSMUST00000208551.2
CDS CCA 72 bp AGAAGGCTCCGCAGCTGGGGGTTGGCCCCAGGGTTCTaGGGCCGCAGGATGGGTCCAGAAGGAGGTGGGCCA +
Preference number: 6 (lower is better)
Translates to: RRLRSWGLAPGF*GRRMGPEGGGP
Trigger: TGGCCCACCTCCTTCTGGACCCATCCTGCGGCCCCAGAACCCTGGGGCCAACCCCCAGCTGCGGAGCCTTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000003049.8
ENSMUST00000207278.2
ENSMUST00000208253.2
ENSMUST00000208551.2
CDS CCA 72 bp TCCCCTGGAGCACCCTTACCTGGCAGTGGCGCCCGCTaGGGAAGCTGTGTGGGCCATGACTGGGCAGGTGGA +
Preference number: 6 (lower is better)
Translates to: SPGAPLPGSGAR*GSCVGHDWAGG
Trigger: TCCACCTGCCCAGTCATGGCCCACACAGCTTCCCCAGCGGGCGCCACTGCCAGGTAAGGGTGCTCCAGGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS CCA 72 bp TGGCCACTGGCAGTGGCGCCCGCTGGGGAAGCTGTGTaGGCCATGACTGGGCAGGTGGAGGATGCAGGAGCT +
Preference number: 6 (lower is better)
Translates to: WPLAVAPAGEAV*AMTGQVEDAGA
Trigger: AGCTCCTGCATCCTCCACCTGCCCAGTCATGGCCCACACAGCTTCCCCAGCGGGCGCCACTGCCAGTGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS CCA 72 bp CGCAGAAGCTCCCACGGCACCCTGAGGCTGAGGCTGTaGTGCACGGAGCCCGCGCTGTTGCTCCAGCTTCTG +
Preference number: 6 (lower is better)
Translates to: RRSSHGTLRLRL*CTEPALLLQLL
Trigger: CAGAAGCTGGAGCAACAGCGCGGGCTCCGTGCACCACAGCCTCAGCCTCAGGGTGCCGTGGGAGCTTCTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207848.3
CDS CCA 72 bp TCTGACCTGGCAGTGGCGCCCGCTGGGGAAGCTGTGTaGGCCATGACTGGGCAGGTGGAGGATGCAGGAGCT +
Preference number: 6 (lower is better)
Translates to: SDLAVAPAGEAV*AMTGQVEDAGA
Trigger: AGCTCCTGCATCCTCCACCTGCCCAGTCATGGCCCACACAGCTTCCCCAGCGGGCGCCACTGCCAGGTCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003049.8
ENSMUST00000207278.2
CDS CCA 72 bp CCTTACCTGGCAGTGGCGCCCGCTGGGGAAGCTGTGTaGGCCATGACTGGGCAGGTGGAGGATGCAGGAGCT +
Preference number: 6 (lower is better)
Translates to: PYLAVAPAGEAV*AMTGQVEDAGA
Trigger: AGCTCCTGCATCCTCCACCTGCCCAGTCATGGCCCACACAGCTTCCCCAGCGGGCGCCACTGCCAGGTAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208551.2
CDS GCA 72 bp GCTGGAGCTGGTGGCAAGGGGACTGCTTGCTTGGTCTaGAGAGAGCCTGAGGTCGAGCTGCCACCAACAGGC +
Preference number: 6 (lower is better)
Translates to: AGAGGKGTACLV*REPEVELPPTG
Trigger: GCCTGTTGGTGGCAGCTCGACCTCAGGCTCTCTGCAGACCAAGCAAGCAGTCCCCTTGCCACCAGCTCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000003049.8
ENSMUST00000207278.2
ENSMUST00000207654.2
ENSMUST00000208253.2
ENSMUST00000208551.2
CDS CCA 72 bp TCTCTCTTTCGTTTGGCCACTGGCAGTGGCGCCCGCTaGGGAAGCTGTGTGGGCCATGACTGGGCAGGTGGA +
Preference number: 6 (lower is better)
Translates to: SLFRLATGSGAR*GSCVGHDWAGG
Trigger: TCCACCTGCCCAGTCATGGCCCACACAGCTTCCCCAGCGGGCGCCACTGCCAGTGGCCAAACGAAAGAGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS CCA 72 bp CTCGAAACACGCGGCCCTCTCCTTCTCTCTTTCGTTTaGCCACTGGCAGTGGCGCCCGCTGGGGAAGCTGTG +
Preference number: 6 (lower is better)
Translates to: LETRGPLLLSFV*PLAVAPAGEAV
Trigger: CACAGCTTCCCCAGCGGGCGCCACTGCCAGTGGCCAAACGAAAGAGAGAAGGAGAGGGCCGCGTGTTTCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208253.2
CDS CAA 72 bp CTGAGGCTGAGGCTGTGGTGCACGGAGCCCGCGCTGTaGCTCCAGCTTCTGCTGCTGGACCTGCTTGTGGTT +
Preference number: 6 (lower is better)
Translates to: LRLRLWCTEPAL*LQLLLLDLLVV
Trigger: AACCACAAGCAGGTCCAGCAGCAGAAGCTGGAGCAACAGCGCGGGCTCCGTGCACCACAGCCTCAGCCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207848.3
CDS CAA 90 bp GCAGCAGGTAGTGCTTGCGGAGCTCCTCGAAGTACGGCCCCAGGTTaGCTGTCCCCTCGATCACAAACACCACATCGGCGACCAGGCCCC +
Preference number: 6 (lower is better)
Translates to: AAGSACGAPRSTAPG*LSPRSQTPHRRPGP
Trigger: GGGGCCTGGTCGCCGATGTGGTGTTTGTGATCGAGGGGACAGCAAACCTGGGGCCGTACTTCGAGGAGCTCCGCAAGCACTACCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000003049.8
ENSMUST00000207654.2
ENSMUST00000207788.2
ENSMUST00000208253.2
ENSMUST00000208551.2
ENSMUST00000208556.2
CDS GCA 72 bp CTGCTTGCTTGGTCTGCAGAGAGCCTGAGGTCGAGCTaGCACCAACAGGCAGCACGAGCCCACGCACAAGCA +
Preference number: 6 (lower is better)
Translates to: LLAWSAESLRSS*HQQAARAHAQA
Trigger: TGCTTGTGCGTGGGCTCGTGCTGCCTGTTGGTGGCAGCTCGACCTCAGGCTCTCTGCAGACCAAGCAAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000003049.8
ENSMUST00000207278.2
ENSMUST00000207654.2
ENSMUST00000208253.2
ENSMUST00000208551.2
CDS GCA 72 bp GCAGCAGAAGCTGGAGCTGGTGGCAAGGGGACTGCTTaGTTGGTCTGCAGAGAGCCTGAGGTCGAGCTGCCA +
Preference number: 6 (lower is better)
Translates to: AAEAGAGGKGTA*LVCREPEVELP
Trigger: TGGCAGCTCGACCTCAGGCTCTCTGCAGACCAAGCAAGCAGTCCCCTTGCCACCAGCTCCAGCTTCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000003049.8
ENSMUST00000207278.2
ENSMUST00000207654.2
ENSMUST00000208253.2
ENSMUST00000208551.2
CDS GCA 72 bp TGCTGTGCCCCCATCCCGCGCTGTTGCTCCAGCTTCTaGTGCTGGACCTGCTTGTGGTTGGTGATGACCTGG +
Preference number: 6 (lower is better)
Translates to: CCAPIPRCCSSF*CWTCLWLVMTW
Trigger: CCAGGTCATCACCAACCACAAGCAGGTCCAGCAGCAGAAGCTGGAGCAACAGCGCGGGATGGGGGCACAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000003049.8
ENSMUST00000208253.2
ENSMUST00000208551.2
CDS GCA 72 bp GCACGGAGCTGTAGCCCGCGCTGTTGCTCCAGCTTCTaGTGCTGGACCTGCTTGTGGTTGGTGATGACCTGG +
Preference number: 6 (lower is better)
Translates to: ARSCSPRCCSSF*CWTCLWLVMTW
Trigger: CCAGGTCATCACCAACCACAAGCAGGTCCAGCAGCAGAAGCTGGAGCAACAGCGCGGGCTACAGCTCCGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207278.2
CDS GCA 72 bp TGTGGTGCACGGAGCCCGCGCTGTTGCTCCAGCTTCTaGTGCTGGACCTGCTTGTGGTTGGTGATGACCTGG +
Preference number: 6 (lower is better)
Translates to: CGARSPRCCSSF*CWTCLWLVMTW
Trigger: CCAGGTCATCACCAACCACAAGCAGGTCCAGCAGCAGAAGCTGGAGCAACAGCGCGGGCTCCGTGCACCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207848.3
CDS CAA 72 bp GCAGAAGCTGGAGCTGGTGGCAAGGGGACTGCTTGCTaGGTCTGCAGAGAGCCTGAGGTCGAGCTGCCACCA +
Preference number: 6 (lower is better)
Translates to: AEAGAGGKGTAC*VCREPEVELPP
Trigger: TGGTGGCAGCTCGACCTCAGGCTCTCTGCAGACCAAGCAAGCAGTCCCCTTGCCACCAGCTCCAGCTTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000003049.8
ENSMUST00000207278.2
ENSMUST00000207654.2
ENSMUST00000208253.2
ENSMUST00000208551.2
CDS CCA 72 bp GCGCAGTCCACGGTGTTGAACACCACAAGGCTGTACTaGGTTCCACCATACGGCTTCCATCCCGTGACTCGG +
Preference number: 6 (lower is better)
Translates to: AQSTVLNTTRLY*VPPYGFHPVTR
Trigger: CCGAGTCACGGGATGGAAGCCGTATGGTGGAACCCAGTACAGCCTTGTGGTGTTCAACACCGTGGACTGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208556.2
CDS CAA 72 bp AGTGCTTGCGGAGCTCCTCGAAGTACGGCCCCAGGTTaGCTGTCCCCTCGATCACAAACACCACATCGGCGA +
Preference number: 6 (lower is better)
Translates to: SACGAPRSTAPG*LSPRSQTPHRR
Trigger: TCGCCGATGTGGTGTTTGTGATCGAGGGGACAGCAAACCTGGGGCCGTACTTCGAGGAGCTCCGCAAGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000003049.8
ENSMUST00000207654.2
ENSMUST00000207788.2
ENSMUST00000208253.2
ENSMUST00000208551.2
ENSMUST00000208556.2
CDS CCA 72 bp AGACCTGGCAAGGCAGAGACCTCGTCAGCTTGGTGTTaGCATCCACAGATGCAGGCTTGGGTTTCTCCTGCC +
Preference number: 6 (lower is better)
Translates to: RPGKAETSSAWC*HPQMQAWVSPA
Trigger: GGCAGGAGAAACCCAAGCCTGCATCTGTGGATGCCAACACCAAGCTGACGAGGTCTCTGCCTTGCCAGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000003049.8
ENSMUST00000207278.2
ENSMUST00000207654.2
ENSMUST00000207848.3
ENSMUST00000208253.2
ENSMUST00000208551.2
ENSMUST00000209191.2
CDS CCA 72 bp AGCAATGAGGGCCTTGGGGCTTCCCAGAACTCCAGATaGGGGTTCCTCCCAGACGTTCTTAGAAGACATCGA +
Preference number: 6 (lower is better)
Translates to: SNEGLGASQNSR*GFLPDVLRRHR
Trigger: TCGATGTCTTCTAAGAACGTCTGGGAGGAACCCCCATCTGGAGTTCTGGGAAGCCCCAAGGCCCTCATTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207490.2
ENSMUST00000207654.2
CDS CAA 90 bp GAGCCAGGTGACAAACTCATAGGCACTGCTGGTAGGTGCGTGACATaGTACATAGGACTCTGGAGCGCAGTCCACGGTGTTGAACACCAC +
Preference number: 6 (lower is better)
Translates to: EPGDKLIGTAGRCVT*YIGLWSAVHGVEHH
Trigger: GTGGTGTTCAACACCGTGGACTGCGCTCCAGAGTCCTATGTACAATGTCACGCACCTACCAGCAGTGCCTATGAGTTTGTCACCTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000003049.8
ENSMUST00000207654.2
ENSMUST00000208253.2
ENSMUST00000208551.2
CDS GCA 72 bp GAGCCAGGTGACAAACTCATAGGCACTGCTGGTAGGTaGGTGACATTGTACATAGGACTCTGGAGCGCAGTC +
Preference number: 6 (lower is better)
Translates to: EPGDKLIGTAGR*VTLYIGLWSAV
Trigger: GACTGCGCTCCAGAGTCCTATGTACAATGTCACGCACCTACCAGCAGTGCCTATGAGTTTGTCACCTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000003049.8
ENSMUST00000207490.2
ENSMUST00000207654.2
ENSMUST00000208253.2
ENSMUST00000208551.2
CDS CCA 72 bp ACTGCTGGTAGGTGCGTGACATTGTACATAGGACTCTaGAGCGCAGTCCACGGTGTTGAACACCACAAGGCT +
Preference number: 6 (lower is better)
Translates to: TAGRCVTLYIGL*SAVHGVEHHKA
Trigger: AGCCTTGTGGTGTTCAACACCGTGGACTGCGCTCCAGAGTCCTATGTACAATGTCACGCACCTACCAGCAGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000003049.8
ENSMUST00000207654.2
ENSMUST00000208253.2
ENSMUST00000208551.2
ENSMUST00000208556.2
CDS CCA 72 bp TCACATAGACCTGGCAAGGCAGAGACCTCGTCAGCTTaGTGTTGGCATCCACAGATGCAGGCTTGGGTTTCT +
Preference number: 6 (lower is better)
Translates to: SHRPGKAETSSA*CWHPQMQAWVS
Trigger: AGAAACCCAAGCCTGCATCTGTGGATGCCAACACCAAGCTGACGAGGTCTCTGCCTTGCCAGGTCTATGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000003049.8
ENSMUST00000207278.2
ENSMUST00000207654.2
ENSMUST00000207848.3
ENSMUST00000208253.2
ENSMUST00000208551.2
ENSMUST00000209191.2
CDS TCA 72 bp AGACTACAGCTCTCGCCACCACCGCCCATGAACATCTaGCCAAATGTGGTGGAATCCTCATATGCACCATCC +
Preference number: 6 (lower is better)
Translates to: RLQLSPPPPMNI*PNVVESSYAPS
Trigger: GGATGGTGCATATGAGGATTCCACCACATTTGGTCAGATGTTCATGGGCGGTGGTGGCGAGAGCTGTAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207490.2
ENSMUST00000207654.2
CDS TCA 72 bp ATTGTACATAGGACTCTGGAGCGCAGTCCACGGTGTTaGACACCACAAGGCTGTACTGGGTTCCACCATACG +
Preference number: 6 (lower is better)
Translates to: IVHRTLERSPRC*TPQGCTGFHHT
Trigger: CGTATGGTGGAACCCAGTACAGCCTTGTGGTGTTCAACACCGTGGACTGCGCTCCAGAGTCCTATGTACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208556.2
CDS CAA 72 bp GACAAACTCATAGGCACTGCTGGTAGGTGCGTGACATaGTACATAGGACTCTGGAGCGCAGTCCACGGTGTT +
Preference number: 6 (lower is better)
Translates to: DKLIGTAGRCVT*YIGLWSAVHGV
Trigger: AACACCGTGGACTGCGCTCCAGAGTCCTATGTACAATGTCACGCACCTACCAGCAGTGCCTATGAGTTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000003049.8
ENSMUST00000207654.2
ENSMUST00000208253.2
ENSMUST00000208551.2
CDS CAA 90 bp CATCGACACTTGACAATGCCTGAAGATAACTTTCTAGGGATGCCATaGGCAGGCAGCAGGGAAAGGTTGATGCCATCGAGCCAGGTGACA +
Preference number: 6 (lower is better)
Translates to: HRHLTMPEDNFLGMP*AGSRERLMPSSQVT
Trigger: TGTCACCTGGCTCGATGGCATCAACCTTTCCCTGCTGCCTGCCAATGGCATCCCTAGAAAGTTATCTTCAGGCATTGTCAAGTGTCGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207490.2
CDS TCA 72 bp ATTGTACATAGGACTCTGGAGCGCAGTCCACGGTGTTaGACACCACAAGGCTGTACTGGGTTCCACCATAGT +
Preference number: 6 (lower is better)
Translates to: IVHRTLERSPRC*TPQGCTGFHHS
Trigger: ACTATGGTGGAACCCAGTACAGCCTTGTGGTGTTCAACACCGTGGACTGCGCTCCAGAGTCCTATGTACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000003049.8
ENSMUST00000207654.2
ENSMUST00000208253.2
ENSMUST00000208551.2
CDS CAA 72 bp TTGACAATGCCTGAAGATAACTTTCTAGGGATGCCATaGGCAGGCAGCAGGGAAAGGCTGTTGGACATTCTC +
Preference number: 6 (lower is better)
Translates to: LTMPEDNFLGMP*AGSRERLLDIL
Trigger: GAGAATGTCCAACAGCCTTTCCCTGCTGCCTGCCAATGGCATCCCTAGAAAGTTATCTTCAGGCATTGTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207654.2
CDS CAA 72 bp GGGTTCCTCCCAGACGTTCTTAGAAGACATCGACACTaGACAATGCCTGAAGATAACTTTCTAGGGATGCCA +
Preference number: 6 (lower is better)
Translates to: GFLPDVLRRHRH*TMPEDNFLGMP
Trigger: TGGCATCCCTAGAAAGTTATCTTCAGGCATTGTCAAGTGTCGATGTCTTCTAAGAACGTCTGGGAGGAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207490.2
ENSMUST00000207654.2