Pregenerated sensors for MED22 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015776Ensembl transcript IDs: ENSMUST00000015920.12, ENSMUST00000102899.10, ENSMUST00000139815.2
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGGCTCAGGTGTGTTCTGTAGGGCCAGGGCCACCACCATGGGAGTaGACAGGGGCTGCAGACTGTAAGGGACCAGCACCAGTCTCCGGG | + |
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Preference number: 1 (lower is better) Translates to: EAQVCSVGPGPPPWE*TGAADCKGPAPVSG Trigger: CCCGGAGACTGGTGCTGGTCCCTTACAGTCTGCAGCCCCTGTCCACTCCCATGGTGGTGGCCCTGGCCCTACAGAACACACCTGAGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR CCA 90 bp | ACACCCTGGCTAGCTGCCTCTCACACAATCTTGGACAGTCAGCTGTaGCAGAGACATTTATGCTCCAGGCAGCAGGCAGTGGACAGGGCT | + |
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Preference number: 1 (lower is better) Translates to: TPWLAASHTILDSQL*QRHLCSRQQAVDRA Trigger: AGCCCTGTCCACTGCCTGCTGCCTGGAGCATAAATGTCTCTGCCACAGCTGACTGTCCAAGATTGTGTGAGAGGCAGCTAGCCAGGGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR GCA 90 bp | GCTGGCTATGACTGTCTGTCCGTCAAACGAGCTAGTCAGGGGCTCTaGTGCCAAGGAGAACTTGGAAAAACACAAGGCCATTGCAGGCCC | + |
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Preference number: 1 (lower is better) Translates to: AGYDCLSVKRASQGL*CQGELGKTQGHCRP Trigger: GGGCCTGCAATGGCCTTGTGTTTTTCCAAGTTCTCCTTGGCAGCAGAGCCCCTGACTAGCTCGTTTGACGGACAGACAGTCATAGCCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR GCA 90 bp | GCTTCACACAGAGGCAGGTCATTAGCTTCGCAGAGACTTGAGCTTTaGCACCACAAGAAACCCCCAGGAGTGACAGGAGCAGGCAGAGGA | + |
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Preference number: 1 (lower is better) Translates to: ASHRGRSLASQRLEL*HHKKPPGVTGAGRG Trigger: TCCTCTGCCTGCTCCTGTCACTCCTGGGGGTTTCTTGTGGTGGCAAAGCTCAAGTCTCTGCGAAGCTAATGACCTGCCTCTGTGTGAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR TCA 90 bp | CCAGTAAGCTTCACACAGAGGCAGGTCATTAGCTTCGCAGAGACTTaGGCTTTGCCACCACAAGAAACCCCCAGGAGTGACAGGAGCAGG | + |
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Preference number: 1 (lower is better) Translates to: PVSFTQRQVISFAET*ALPPQETPRSDRSR Trigger: CCTGCTCCTGTCACTCCTGGGGGTTTCTTGTGGTGGCAAAGCTCAAGTCTCTGCGAAGCTAATGACCTGCCTCTGTGTGAAGCTTACTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR GCA 90 bp | ATGGGAACAAGATGTCCACTGCAGCACTGGACATCTGTAGTTGACTaGAGCTTCTGTGCAGCAGCAGCAGGAGCAAACCTACCACCAGGG | + |
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Preference number: 1 (lower is better) Translates to: MGTRCPLQHWTSVVD*SFCAAAAGANLPPG Trigger: CCCTGGTGGTAGGTTTGCTCCTGCTGCTGCTGCACAGAAGCTGCAGTCAACTACAGATGTCCAGTGCTGCAGTGGACATCTTGTTCCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR GCA 90 bp | GGTGGTGGTGTGGGCAGGAGGCTGATAGGGGCAGACAAAACCTACTaGCTCACCTACCGAAGAACTCTGCCATTTAAGGAAATTCCTAGG | + |
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Preference number: 1 (lower is better) Translates to: GGGVGRRLIGADKTY*LTYRRTLPFKEIPR Trigger: CCTAGGAATTTCCTTAAATGGCAGAGTTCTTCGGTAGGTGAGGCAGTAGGTTTTGTCTGCCCCTATCAGCCTCCTGCCCACACCACCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR TCA 90 bp | CCATCCCACCTCTCCACTGTGAGTCTGATGACATTCACATGGAACTaGATCTCTGAGCAAGCAGTAGGCAGGGCTGTCCCAGAAAGTGAA | + |
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Preference number: 1 (lower is better) Translates to: PSHLSTVSLMTFTWN*ISEQAVGRAVPESE Trigger: TTCACTTTCTGGGACAGCCCTGCCTACTGCTTGCTCAGAGATTCAGTTCCATGTGAATGTCATCAGACTCACAGTGGAGAGGTGGGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR CCA 90 bp | CAACCACCCTCCCTATTCAAGGTCTTCAATGGGACAAACTTCCACTaGCAGTCAGGAAGGGAGCCACCTGCTGTAAATAACTGGACAGCA | + |
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Preference number: 1 (lower is better) Translates to: QPPSLFKVFNGTNFH*QSGREPPAVNNWTA Trigger: TGCTGTCCAGTTATTTACAGCAGGTGGCTCCCTTCCTGACTGCCAGTGGAAGTTTGTCCCATTGAAGACCTTGAATAGGGAGGGTGGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR GCA 90 bp | TTACATTACACAGGGAAAGCCAGAGACAGGAGGAGGCAAGCACAATaGCTCAGTGGTCATAGCAGTGGCTACTTGGACCACATCTGTTTC | + |
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Preference number: 1 (lower is better) Translates to: LHYTGKARDRRRQAQ*LSGHSSGYLDHICF Trigger: GAAACAGATGTGGTCCAAGTAGCCACTGCTATGACCACTGAGGCATTGTGCTTGCCTCCTCCTGTCTCTGGCTTTCCCTGTGTAATGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR CCA 90 bp | CAAGGCCTCTCTGGATCAGAAAGTTTCAGGTATCAACATTCTAAGTaGCCCTGTAGAGAGCTATGTGACAGATCCTGCCTGCTGCTATCC | + |
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Preference number: 1 (lower is better) Translates to: QGLSGSESFRYQHSK*PCRELCDRSCLLLS Trigger: GGATAGCAGCAGGCAGGATCTGTCACATAGCTCTCTACAGGGCCACTTAGAATGTTGATACCTGAAACTTTCTGATCCAGAGAGGCCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR CCA 90 bp | CAAGGCCTCCATTCTCCAGCCCGGTTCCGACGACATATTTTACACTaGACTCTTGATTTCTCAAGGCCTCTCTGGATCAGAAAGTTTCAG | + |
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Preference number: 1 (lower is better) Translates to: QGLHSPARFRRHILH*TLDFSRPLWIRKFQ Trigger: CTGAAACTTTCTGATCCAGAGAGGCCTTGAGAAATCAAGAGTCCAGTGTAAAATATGTCGTCGGAACCGGGCTGGAGAATGGAGGCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR CCA 90 bp | GCTAAGCTGATGAACACTGAGACCAAAGATAACCCCAGAACTCTCTaGAGAACTTTAGAACTACTGAAGCTTGGCAGTGACACTGAGTCT | + |
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Preference number: 1 (lower is better) Translates to: AKLMNTETKDNPRTL*RTLELLKLGSDTES Trigger: AGACTCAGTGTCACTGCCAAGCTTCAGTAGTTCTAAAGTTCTCCAGAGAGTTCTGGGGTTATCTTTGGTCTCAGTGTTCATCAGCTTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR-3UTR CCA 90 bp | ACTGTAAGGGACCAGCACCAGTCTCCGGGGACGCCAGAAGAGGGGCTGAGAGGCCTGGGCCCCTGCTGGTaGCTGGCTATGACTGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: TVRDQHQSPGTPEEGLRGLGPCW*LAMTVC Trigger: ACAGACAGTCATAGCCAGCCACCAGCAGGGGCCCAG...GCCTCTCAGCCCCTCTTCTGGCGTCCCCGGAGACTGGTGCTGGTCCCTTACAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR-3UTR CCA 90 bp | TGGTGTGGGCAGGAGGCTGATAGGGGCAGACAAAACCTACTGCCTCACCTACCGATTGCAGGCCCTAGCTaGTCTGGGCAGGCAGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: WCGQEADRGRQNLLPHLPIAGPS*SGQAAG Trigger: GCCTGCTGCCTGCCCAGACCAGCTAGGGCCTGCAAT...CGGTAGGTGAGGCAGTAGGTTTTGTCTGCCCCTATCAGCCTCCTGCCCACACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR CAA 90 bp | TCAGGGGCTCTGCTGCCAAGGAGAACTTGGAAAAACACAAGGCCATaGCAGGCCCTAGCTGGTCTGGGCAGGCAGCAGGCAGCACCTGCA | + |
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Preference number: 2 (lower is better) Translates to: SGALLPRRTWKNTRP*QALAGLGRQQAAPA Trigger: TGCAGGTGCTGCCTGCTGCCTGCCCAGACCAGCTAGGGCCTGCAATGGCCTTGTGTTTTTCCAAGTTCTCCTTGGCAGCAGAGCCCCTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR-3UTR GCA 90 bp | ACTGTAAGGGACCAGCACCAGTCTCCGGGGACGCCAGAAGAGGGGCTGAGAGGCAGGAGGCAAGCACAATaGCTCAGTGGTCATAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: TVRDQHQSPGTPEEGLRGRRQAQ*LSGHSS Trigger: ACTGCTATGACCACTGAGGCATTGTGCTTGCCTCCT...GCCTCTCAGCCCCTCTTCTGGCGTCCCCGGAGACTGGTGCTGGTCCCTTACAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR-3UTR CCA 90 bp | GCAGGAGCAAACCTACCACCAGGGGGAGTCAGGCAGGGTGCTGCTGACCGGAACAAAGCTAGGCTGTGCTaGGTATCCACAGCACTTCCT | + |
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Preference number: 2 (lower is better) Translates to: AGANLPPGGVRQGAADRNKARLC*VSTALP Trigger: AGGAAGTGCTGTGGATACCCAGCACAGCCTAGCTTT...GTTCCGGTCAGCAGCACCCTGCCTGACTCCCCCTGGTGGTAGGTTTGCTCCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR-3UTR CCA 90 bp | ACTGTAAGGGACCAGCACCAGTCTCCGGGGACGCCAGAAGAGGGGCTGAGAGGCAAGTCTCTGCCACTTTaGGGTACAGTAGATACTCCC | + |
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Preference number: 2 (lower is better) Translates to: TVRDQHQSPGTPEEGLRGKSLPL*GTVDTP Trigger: GGGAGTATCTACTGTACCCCAAAGTGGCAGAGACTT...GCCTCTCAGCCCCTCTTCTGGCGTCCCCGGAGACTGGTGCTGGTCCCTTACAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR-3UTR CCA 90 bp | GGAAGGGAGCCACCTGCTGTAAATAACTGGACAGCATTCCCCAACCATCACGGGGAGGGGCCGAGGCTTTaGAAACCCAGCACTCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: GREPPAVNNWTAFPNHHGEGPRL*KPSTLG Trigger: ACCCAGAGTGCTGGGTTTCCAAAGCCTCGGCCCCTC...CCCGTGATGGTTGGGGAATGCTGTCCAGTTATTTACAGCAGGTGGCTCCCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR-3UTR CCA 90 bp | CGTGATGCAGAGGGGCCGAGGCTTTGGAAACCCAGCACTCTGGGTTCCTATCTGTTCAAGCTAATGGGGTaGGGCAAGGCCTCCATTCTC | + |
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Preference number: 2 (lower is better) Translates to: RDAEGPRLWKPSTLGSYLFKLMG*GKASIL Trigger: GAGAATGGAGGCCTTGCCCCACCCCATTAGCTTGAA...CAGATAGGAACCCAGAGTGCTGGGTTTCCAAAGCCTCGGCCCCTCTGCATCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR CAA 90 bp | CAGCCGTTGACACACAACCAAGTCCTGTGTTTTCATCCCTCTTCATaGAAGGGAAGGCCTGGGCCCCTGCTGGTGGCTGGCTATGACTGT | + |
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Preference number: 2 (lower is better) Translates to: QPLTHNQVLCFHPSS*KGRPGPLLVAGYDC Trigger: ACAGTCATAGCCAGCCACCAGCAGGGGCCCAGGCCTTCCCTTCAATGAAGAGGGATGAAAACACAGGACTTGGTTGTGTGTCAACGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR CAA 90 bp | CTTCTCCTCTGTGCTGGCCCCTCTGCTAAGCGGTTCTGGCCACTCTaGCATCCAAAGAAAGGTGGTGTCAACAGGCCATGTGACTTAGGC | + |
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Preference number: 2 (lower is better) Translates to: LLLCAGPSAKRFWPL*HPKKGGVNRPCDLG Trigger: GCCTAAGTCACATGGCCTGTTGACACCACCTTTCTTTGGATGCAAGAGTGGCCAGAACCGCTTAGCAGAGGGGCCAGCACAGAGGAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR-3UTR TCA 90 bp | CTTCTGTGCAGCAGCAGCAGGAGCAAACCTACCACCAGGGGGAGTCAGGCAGGGTTTACACTGGACTCTTaGTTTCTCAAGGCCTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: LLCSSSRSKPTTRGSQAGFTLDS*FLKASL Trigger: CAGAGAGGCCTTGAGAAATCAAGAGTCCAGTGTAAA...CCCTGCCTGACTCCCCCTGGTGGTAGGTTTGCTCCTGCTGCTGCTGCACAGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR-3UTR TCA 90 bp | AGAGGCAGGTCATTAGCTTCGCAGAGACTTGAGCTTTGCCACCACAAGAAACCCAGAAACGTATGCACGTaGTGCAGAGGGGCCGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: RGRSLASQRLELCHHKKPRNVCT*CRGAEA Trigger: AGCCTCGGCCCCTCTGCATCACGTGCATACGTTTCT...GGGTTTCTTGTGGTGGCAAAGCTCAAGTCTCTGCGAAGCTAATGACCTGCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR-3UTR TCA 90 bp | CTCAGTGGTCATAGCAGTGGCTACTTGGACCACATCTGTTTCTACAGCTGTCTACAAAGCCACCCTGCTTaGGTTCCTTACCCCTCCCCC | + |
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Preference number: 2 (lower is better) Translates to: LSGHSSGYLDHICFYSCLQSHPA*VPYPSP Trigger: GGGGGAGGGGTAAGGAACTCAAGCAGGGTGGCTTTG...TAGACAGCTGTAGAAACAGATGTGGTCCAAGTAGCCACTGCTATGACCACTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR-3UTR TCA 90 bp | TCTAATATGCACAAGGCCCTAGCTTTCTCCCATGCCTGTCCCCAGCAGTCTCTCAGTGACAGGAAGATGTaGGGAACTCACCCTGGGTTG | + |
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Preference number: 2 (lower is better) Translates to: SNMHKALAFSHACPQQSLSDRKM*GTHPGL Trigger: CAACCCAGGGTGAGTTCCTCACATCTTCCTGTCACT...GAGAGACTGCTGGGGACAGGCATGGGAGAAAGCTAGGGCCTTGTGCATATTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR-3UTR CCA 90 bp | CAAGTGTCCTTGAAGTACTACAAGGTAGTGACAGGAAGATGTGAGGAACTCACCATTGAAGGGAAGGCCTaGGCCCCTGCTGGTGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: QVSLKYYKVVTGRCEELTIEGKA*APAGGW Trigger: CCAGCCACCAGCAGGGGCCCAGGCCTTCCCTTCAAT...GGTGAGTTCCTCACATCTTCCTGTCACTACCTTGTAGTACTTCAAGGACACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR-3UTR CCA 90 bp | GTTCCTGAGGCTACAGTGGCTCCTGATCCCAAAGTCCCCAAGGGAGCTAAAACTAAAGCTAGGCTGTGCTaGGTATCCACAGCACTTCCT | + |
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Preference number: 2 (lower is better) Translates to: VPEATVAPDPKVPKGAKTKARLC*VSTALP Trigger: AGGAAGTGCTGTGGATACCCAGCACAGCCTAGCTTT...AGTTTTAGCTCCCTTGGGGACTTTGGGATCAGGAGCCACTGTAGCCTCAGGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 |
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| 3UTR-3UTR CCA 90 bp | CCTGAGGCTACAGTGGCTCCTGATCCCAAAGTCCCCAAGGGAGCTAAAACTGAACTGCCAAGGAGAACTTaGAAAAACACAAGGCCATTG | + |
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Preference number: 2 (lower is better) Translates to: PEATVAPDPKVPKGAKTELPRRT*KNTRPL Trigger: CAATGGCCTTGTGTTTTTCCAAGTTCTCCTTGGCAG...TTCAGTTTTAGCTCCCTTGGGGACTTTGGGATCAGGAGCCACTGTAGCCTCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR-3UTR CCA 90 bp | AAAAAGCTAGGCTGTGCTGGGTATCCACAGCACTTCCTTTCTGATAAACTAGGCACGTCGTTAGAGACCTaGAAGGCCACAAGGGGCCAA | + |
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Preference number: 2 (lower is better) Translates to: KKLGCAGYPQHFLSDKLGTSLET*KATRGQ Trigger: TTGGCCCCTTGTGGCCTTCCAGGTCTCTAACGACGT...GCCTAGTTTATCAGAAAGGAAGTGCTGTGGATACCCAGCACAGCCTAGCTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR-3UTR GCA 90 bp | GGTCATAGCAGTGGCTACTTGGACCACATCTGTTTCTACAGCTGTCTAATATGCGAGTCAAAGCCACCCTaGTTGAGTTCCTTACCCCTC | + |
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Preference number: 2 (lower is better) Translates to: GHSSGYLDHICFYSCLICESKPP*LSSLPL Trigger: GAGGGGTAAGGAACTCAAGCAGGGTGGCTTTGACTC...GCATATTAGACAGCTGTAGAAACAGATGTGGTCCAAGTAGCCACTGCTATGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR-3UTR CCA 90 bp | TATGAGAGAGGTGATTGCCCAAAGAGGACACAGATCATCCCAGAAACGTATGCAGACATCCAGGTATCTTaGGCCCAGGAGTCAAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: YERGDCPKRTQIIPETYADIQVS*AQESKP Trigger: TGGCTTTGACTCCTGGGCCCAAGATACCTGGATGTC...TGCATACGTTTCTGGGATGATCTGTGTCCTCTTTGGGCAATCACCTCTCTCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR-3UTR CCA 90 bp | ATTCAACAGTCTCATCTCAAAAGTAGCAGAAGGAAATGGTGGGAGAATCCAGGAGGGGATACCCTTTTCTaGCCACAGCCGTTGACACAC | + |
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Preference number: 2 (lower is better) Translates to: IQQSHLKSSRRKWWENPGGDTLF*PQPLTH Trigger: GTGTGTCAACGGCTGTGGCCAGAAAAGGGTATCCCC...TCCTGGATTCTCCCACCATTTCCTTCTGCTACTTTTGAGATGAGACTGTTGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR CAA 90 bp | TCCATTCTCCAGCCCGGTTCCGACGACATATTTTACACTGGACTCTaGATTTCTCAAGGCCTCTCTGGATCAGAAAGTTTCAGGTATCAA | + |
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Preference number: 2 (lower is better) Translates to: SILQPGSDDIFYTGL*ISQGLSGSESFRYQ Trigger: TTGATACCTGAAACTTTCTGATCCAGAGAGGCCTTGAGAAATCAAGAGTCCAGTGTAAAATATGTCGTCGGAACCGGGCTGGAGAATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR-3UTR CCA 90 bp | TATCTGAGCAATTTATCCCCTCAACCCTTGTACAGGACTGAGTCACTGTCCCAGAACCCCAGAACTCTCTaGAGAACTTTAGAACTACTG | + |
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Preference number: 2 (lower is better) Translates to: YLSNLSPQPLYRTESLSQNPRTL*RTLELL Trigger: CAGTAGTTCTAAAGTTCTCCAGAGAGTTCTGGGGTT...CTGGGACAGTGACTCAGTCCTGTACAAGGGTTGAGGGGATAAATTGCTCAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR-3UTR CCA 90 bp | AAAAAGCTAGGCTGTGCTGGGTATCCACAGCACTTCCTTTCTGATAAACTAGGCATAGCAGTGGCTACTTaGACCACATCTGTTTCTACA | + |
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Preference number: 2 (lower is better) Translates to: KKLGCAGYPQHFLSDKLGIAVAT*TTSVST Trigger: TGTAGAAACAGATGTGGTCCAAGTAGCCACTGCTAT...GCCTAGTTTATCAGAAAGGAAGTGCTGTGGATACCCAGCACAGCCTAGCTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR TCA 72 bp | ACCAGCACCAGTCTCCGGGGACGCCAGAAGAGGGGCTaGGAGGCCATCAGCAGAATCTGCGTCGAGGTCCAG | + |
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Preference number: 3 (lower is better) Translates to: TSTSLRGRQKRG*EAISRICVEVQ Trigger: CTGGACCTCGACGCAGATTCTGCTGATGGCCTCTCAGCCCCTCTTCTGGCGTCCCCGGAGACTGGTGCTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR-3UTR CAA 90 bp | TGGTGTGGGCAGGAGGCTGATAGGGGCAGACAAAACCTACTGCCTCACCTACCGAGAGGGGCCGAGGCTTaGGAAACCCAGCACTCTGGG | + |
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Preference number: 3 (lower is better) Translates to: WCGQEADRGRQNLLPHLPRGAEA*ETQHSG Trigger: CCCAGAGTGCTGGGTTTCCAAAGCCTCGGCCCCTCT...CGGTAGGTGAGGCAGTAGGTTTTGTCTGCCCCTATCAGCCTCCTGCCCACACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR CCA 72 bp | GCTGCTGACCGGAACCTTAACTTCAAGCTAATGGGGTaGGGCAAGGCCTCCATTCTCCAGCCCGGTTCCGAC | + |
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Preference number: 3 (lower is better) Translates to: AADRNLNFKLMG*GKASILQPGSD Trigger: GTCGGAACCGGGCTGGAGAATGGAGGCCTTGCCCCACCCCATTAGCTTGAAGTTAAGGTTCCGGTCAGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR-3UTR CAA 90 bp | TGGCCCTGGCCTGGACAGGTTCCTGAGGCTACAGTGGCTCCTGATCCCAAAGTCAAAAACACAAGGCCATaGCAGGCCCTAGCTGGTCTG | + |
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Preference number: 3 (lower is better) Translates to: WPWPGQVPEATVAPDPKVKNTRP*QALAGL Trigger: CAGACCAGCTAGGGCCTGCAATGGCCTTGTGTTTTT...GACTTTGGGATCAGGAGCCACTGTAGCCTCAGGAACCTGTCCAGGCCAGGGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR GCA 72 bp | ATCCAGGTATCTTGGGCCCAGGAGTCAAAGCCACCCTaGTTGAGTTCCTTACCCCTCCCCCATCCCACCTCT | + |
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Preference number: 3 (lower is better) Translates to: IQVSWAQESKPP*LSSLPLPHPTS Trigger: AGAGGTGGGATGGGGGAGGGGTAAGGAACTCAAGCAGGGTGGCTTTGACTCCTGGGCCCAAGATACCTGGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR CCA 72 bp | ATAACTGGACAGCATTCCCCAACCATCACGGGGAACTaGCCCTGGCCTGGACAGGTTCCTGAGGCTACAGTG | + |
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Preference number: 3 (lower is better) Translates to: ITGQHSPTITGN*PWPGQVPEATV Trigger: CACTGTAGCCTCAGGAACCTGTCCAGGCCAGGGCCAGTTCCCCGTGATGGTTGGGGAATGCTGTCCAGTTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 |
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| 3UTR CCA 72 bp | AACTTGGAAAAACACAAGGCCATTGCAGGCCCTAGCTaGTCTGGGCAGGCAGCAGGCAGCACCTGCATGGCA | + |
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Preference number: 3 (lower is better) Translates to: NLEKHKAIAGPS*SGQAAGSTCMA Trigger: TGCCATGCAGGTGCTGCCTGCTGCCTGCCCAGACCAGCTAGGGCCTGCAATGGCCTTGTGTTTTTCCAAGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR TCA 72 bp | CACACAACCAAGTCCTGTGTTTTCATCCCTCTTCATTaGAGGGAAGGCCTGGGCCCCTGCTGGTGGCTGGCT | + |
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Preference number: 3 (lower is better) Translates to: HTTKSCVFIPLH*REGLGPCWWLA Trigger: AGCCAGCCACCAGCAGGGGCCCAGGCCTTCCCTTCAATGAAGAGGGATGAAAACACAGGACTTGGTTGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR GCA 72 bp | GTGCTGGCCCCTCTGCTAAGCGGTTCTGGCCACTCTTaGATCCAAAGAAAGGTGGTGTCAACAGGCCATGTG | + |
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Preference number: 3 (lower is better) Translates to: VLAPLLSGSGHS*IQRKVVSTGHV Trigger: CACATGGCCTGTTGACACCACCTTTCTTTGGATGCAAGAGTGGCCAGAACCGCTTAGCAGAGGGGCCAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| 3UTR CCA 72 bp | CCTGGTGGCAGACCTGTTTCCATCCCTACAGGGTCCTaGCCTAACTGGGTAACAGTCAGCAATACAGGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PGGRPVSIPTGS*PNWVTVSNTGL Trigger: CAGACCTGTATTGCTGACTGTTACCCAGTTAGGCCAGGACCCTGTAGGGATGGAAACAGGTCTGCCACCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
||
| 3UTR-3UTR CAA 90 bp | CGTGATGCAGAGGGGCCGAGGCTTTGGAAACCCAGCACTCTGGGTTCCTATCTGGCTGCCAAGGAGAACTaGGAAAAACACAAGGCCATT | + |
|
Preference number: 3 (lower is better) Translates to: RDAEGPRLWKPSTLGSYLAAKEN*EKHKAI Trigger: AATGGCCTTGTGTTTTTCCAAGTTCTCCTTGGCAGC...CAGATAGGAACCCAGAGTGCTGGGTTTCCAAAGCCTCGGCCCCTCTGCATCACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
||
| 3UTR TCA 72 bp | AAAGAGGACACAGATCATCCCAGAAACGTATGCACGTaGTGCAGAGGGGCCGAGGCTTTGGAAACCCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: KEDTDHPRNVCT*CRGAEALETQH Trigger: GTGCTGGGTTTCCAAAGCCTCGGCCCCTCTGCATCACGTGCATACGTTTCTGGGATGATCTGTGTCCTCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
||
| 3UTR GCA 72 bp | AGAGGCAGGTCATTAGCTTCGCAGAGACTTGAGCTTTaGCACCACAAGAAACCCCCAGGAGTGACAGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: RGRSLASQRLEL*HHKKPPGVTGA Trigger: TGCTCCTGTCACTCCTGGGGGTTTCTTGTGGTGGCAAAGCTCAAGTCTCTGCGAAGCTAATGACCTGCCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
||
| 3UTR CCA 72 bp | GAAACGTATGCACGTGATGCAGAGGGGCCGAGGCTTTaGAAACCCAGCACTCTGGGTTCCTATCTGAGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: ETYARDAEGPRL*KPSTLGSYLSN Trigger: ATTGCTCAGATAGGAACCCAGAGTGCTGGGTTTCCAAAGCCTCGGCCCCTCTGCATCACGTGCATACGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
||
| 3UTR CCA 72 bp | CTAGCTGCCTCTCACACAATCTTGGACAGTCAGCTGTaGCAGAGACATTTATGCTCCAGGCAGCAGGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: LAASHTILDSQL*QRHLCSRQQAV Trigger: CACTGCCTGCTGCCTGGAGCATAAATGTCTCTGCCACAGCTGACTGTCCAAGATTGTGTGAGAGGCAGCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
||
| 3UTR TCA 72 bp | TTCACACAGAGGCAGGTCATTAGCTTCGCAGAGACTTaGGCTTTGCCACCACAAGAAACCCCCAGGAGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: FTQRQVISFAET*ALPPQETPRSD Trigger: GTCACTCCTGGGGGTTTCTTGTGGTGGCAAAGCTCAAGTCTCTGCGAAGCTAATGACCTGCCTCTGTGTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
||
| 3UTR GCA 72 bp | GACTGTCTGTCCGTCAAACGAGCTAGTCAGGGGCTCTaGTGCCAAGGAGAACTTGGAAAAACACAAGGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: DCLSVKRASQGL*CQGELGKTQGH Trigger: ATGGCCTTGTGTTTTTCCAAGTTCTCCTTGGCAGCAGAGCCCCTGACTAGCTCGTTTGACGGACAGACAGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
||
| 3UTR GCA 72 bp | AGATGTCCACTGCAGCACTGGACATCTGTAGTTGACTaGAGCTTCTGTGCAGCAGCAGCAGGAGCAAACCTA | + |
|
Preference number: 3 (lower is better) Translates to: RCPLQHWTSVVD*SFCAAAAGANL Trigger: TAGGTTTGCTCCTGCTGCTGCTGCACAGAAGCTGCAGTCAACTACAGATGTCCAGTGCTGCAGTGGACATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
||
| 3UTR GCA 72 bp | GTGGGCAGGAGGCTGATAGGGGCAGACAAAACCTACTaGCTCACCTACCGAAGAACTCTGCCATTTAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: VGRRLIGADKTY*LTYRRTLPFKE Trigger: TTCCTTAAATGGCAGAGTTCTTCGGTAGGTGAGGCAGTAGGTTTTGTCTGCCCCTATCAGCCTCCTGCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
||
| 3UTR GCA 72 bp | ACAATCTTGGACAGTCAGCTGTGGCAGAGACATTTATaGTCCAGGCAGCAGGCAGTGGACAGGGCTCTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: TILDSQLWQRHL*SRQQAVDRALY Trigger: ATAGAGAGCCCTGTCCACTGCCTGCTGCCTGGAGCATAAATGTCTCTGCCACAGCTGACTGTCCAAGATTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
||
| 3UTR CCA 72 bp | CTATCACCAACCACCCTCCCTATTCAAGGTCTTCAATaGGACAAACTTCCACTGGCAGTCAGGAAGGGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LSPTTLPIQGLQ*DKLPLAVRKGA Trigger: GGCTCCCTTCCTGACTGCCAGTGGAAGTTTGTCCCATTGAAGACCTTGAATAGGGAGGGTGGTTGGTGATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
||
| 3UTR CCA 72 bp | CAGAAGGAAATGGTGGGAGAATCCAGGAAGACACCCTaGCTAGCTGCCTCTCACACAATCTTGGACAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: QKEMVGESRKTP*LAASHTILDSQ Trigger: CTGACTGTCCAAGATTGTGTGAGAGGCAGCTAGCCAGGGTGTCTTCCTGGATTCTCCCACCATTTCCTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
||
| 3UTR TCA 72 bp | CTCTCCACTGTGAGTCTGATGACATTCACATGGAACTaGATCTCTGAGCAAGCAGTAGGCAGGGCTGTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LSTVSLMTFTWN*ISEQAVGRAVP Trigger: TGGGACAGCCCTGCCTACTGCTTGCTCAGAGATTCAGTTCCATGTGAATGTCATCAGACTCACAGTGGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
||
| 3UTR-3UTR CAA 90 bp | GGTCATAGCAGTGGCTACTTGGACCACATCTGTTTCTACAGCTGTCTAATATGCTTTCATCCCTCTTCATaGAAGGGAAGGCCTGGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: GHSSGYLDHICFYSCLICFHPSS*KGRPGP Trigger: GGGCCCAGGCCTTCCCTTCAATGAAGAGGGATGAAA...GCATATTAGACAGCTGTAGAAACAGATGTGGTCCAAGTAGCCACTGCTATGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGGGAGCCACCTGCTGTAAATAACTGGACAGCATTCCCCAACCATCACGGGTTTTACACTGGACTCTaGATTTCTCAAGGCCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: GREPPAVNNWTAFPNHHGFYTGL*ISQGLS Trigger: AGAGAGGCCTTGAGAAATCAAGAGTCCAGTGTAAAA...CCCGTGATGGTTGGGGAATGCTGTCCAGTTATTTACAGCAGGTGGCTCCCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
||
| 3UTR TCA 72 bp | TCTGAGCAATTTATCCCCTCAACCCTTGTACAGGACTaGGTCACTGTCCCAGTACTCATCCGCTCAAGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: SEQFIPSTLVQD*VTVPVLIRSSV Trigger: GACACTTGAGCGGATGAGTACTGGGACAGTGACTCAGTCCTGTACAAGGGTTGAGGGGATAAATTGCTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
||
| 3UTR GCA 72 bp | TCTAAGTGGCCCTGTAGAGAGCTATGTGACAGATCCTaGCTGCTGCTATCCTCTGAGACTAACATAGGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SKWPCRELCDRS*LLLSSETNIGL Trigger: CAGACCTATGTTAGTCTCAGAGGATAGCAGCAGGCAGGATCTGTCACATAGCTCTCTACAGGGCCACTTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
||
| 3UTR CCA 72 bp | GAGTCTAAGATGGGAACAAGATGTCCACTGCAGCACTaGACATCTGTAGTTGACTGCAGCTTCTGTGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: ESKMGTRCPLQH*TSVVDCSFCAA Trigger: TGCTGCACAGAAGCTGCAGTCAACTACAGATGTCCAGTGCTGCAGTGGACATCTTGTTCCCATCTTAGACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
||
| 3UTR CCA 72 bp | GTAGTGACAGGAAGATGTGAGGAACTCACCCTGGGTTaGTCTAAGTCTCTGCCACTTTGGGGTACAGTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: VVTGRCEELTLG*SKSLPLWGTVD Trigger: ATCTACTGTACCCCAAAGTGGCAGAGACTTAGACCAACCCAGGGTGAGTTCCTCACATCTTCCTGTCACTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
||
| 3UTR CCA 72 bp | CATTCTCCAGCCCGGTTCCGACGACATATTTTACACTaGACTCTTGATTTCTCAAGGCCTCTCTGGATCAGA | + |
|
Preference number: 3 (lower is better) Translates to: HSPARFRRHILH*TLDFSRPLWIR Trigger: TCTGATCCAGAGAGGCCTTGAGAAATCAAGAGTCCAGTGTAAAATATGTCGTCGGAACCGGGCTGGAGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
||
| 3UTR CCA 72 bp | TCCCTATTCAAGGTCTTCAATGGGACAAACTTCCACTaGCAGTCAGGAAGGGAGCCACCTGCTGTAAATAAC | + |
|
Preference number: 3 (lower is better) Translates to: SLFKVFNGTNFH*QSGREPPAVNN Trigger: GTTATTTACAGCAGGTGGCTCCCTTCCTGACTGCCAGTGGAAGTTTGTCCCATTGAAGACCTTGAATAGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
||
| 3UTR TCA 72 bp | AGCCCGGTTCCGACGACATATTTTACACTGGACTCTTaGTTTCTCAAGGCCTCTCTGGATCAGAAAGTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: SPVPTTYFTLDS*FLKASLDQKVS Trigger: TGAAACTTTCTGATCCAGAGAGGCCTTGAGAAATCAAGAGTCCAGTGTAAAATATGTCGTCGGAACCGGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
||
| 3UTR CCA 72 bp | TCTGGATCAGAAAGTTTCAGGTATCAACATTCTAAGTaGCCCTGTAGAGAGCTATGTGACAGATCCTGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SGSESFRYQHSK*PCRELCDRSCL Trigger: CAGGCAGGATCTGTCACATAGCTCTCTACAGGGCCACTTAGAATGTTGATACCTGAAACTTTCTGATCCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
||
| CDS-3UTR GCA 90 bp | ACTGGACAGCATTCCCCAACCATCACGGGGAACTGGCCCTGGCCTGGACAGGTTGCAGCAGCGTCTCCTTaGTCTGGGGAAGGGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TGQHSPTITGNWPWPGQVAAASP*SGEGLS Trigger: AGAGAGCCCTTCCCCAGAGCAAGGAGACGCTGCTGC...AACCTGTCCAGGCCAGGGCCAGTTCCCCGTGATGGTTGGGGAATGCTGTCCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 |
||
| CDS-3UTR TCA 90 bp | CTGGACAGGTTCCTGAGGCTACAGTGGCTCCTGATCCCAAAGTCCCCAAGGGAGTTGTCCTGTTCGCCCTaGGTAGCCCGAGACACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LDRFLRLQWLLIPKSPRELSCSP*VARDTC Trigger: GCAGGTGTCTCGGGCTACTCAGGGCGAACAGGACAA...CTCCCTTGGGGACTTTGGGATCAGGAGCCACTGTAGCCTCAGGAACCTGTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 |
||
| CDS-3UTR TCA 90 bp | TGGCCCTGGCCTGGACAGGTTCCTGAGGCTACAGTGGCTCCTGATCCCAAAGTCGAGCCGCTTGTTGTATaGCTGCAGCAGCGTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: WPWPGQVPEATVAPDPKVEPLVV*LQQRLL Trigger: AAGGAGACGCTGCTGCAGTCATACAACAAGCGGCTC...GACTTTGGGATCAGGAGCCACTGTAGCCTCAGGAACCTGTCCAGGCCAGGGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 |
||
| CDS-3UTR TCA 90 bp | GACAGGTTCCTGAGGCTACAGTGGCTCCTGATCCCAAAGTCCCCAAGGGAGCTACGCCAGAAGAGGGGCTaGGAGGCCATCAGCAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: DRFLRLQWLLIPKSPRELRQKRG*EAISRI Trigger: GATTCTGCTGATGGCCTCTCAGCCCCTCTTCTGGCG...TAGCTCCCTTGGGGACTTTGGGATCAGGAGCCACTGTAGCCTCAGGAACCTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015920.12 |
||
| CDS-3UTR GCA 90 bp | CCAACCATCACGGGGAACTGGCCCTGGCCTGGACAGGTTCCTGAGGCTACAGTGCGCTTGTTGTATGACTaGAGCAGCGTCTCCTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PTITGNWPWPGQVPEATVRLLYD*SSVSLL Trigger: GAGCAAGGAGACGCTGCTGCAGTCATACAACAAGCG...CACTGTAGCCTCAGGAACCTGTCCAGGCCAGGGCCAGTTCCCCGTGATGGTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 |
||
| CDS-3UTR GCA 90 bp | TCCCCAACCATCACGGGGAACTGGCCCTGGCCTGGACAGGTTCCTGAGGCTACACGCTTGTTGTATGACTaGAGCAGCGTCTCCTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SPTITGNWPWPGQVPEATRLLYD*SSVSLL Trigger: GAGCAAGGAGACGCTGCTGCAGTCATACAACAAGCG...TGTAGCCTCAGGAACCTGTCCAGGCCAGGGCCAGTTCCCCGTGATGGTTGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 |
||
| CDS-3UTR GCA 90 bp | CCTGGACAGGTTCCTGAGGCTACAGTGGCTCCTGATCCCAAAGTCCCCAAGGGAGCCATCAGCAGAATCTaGGTCGAGGTCCAGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PGQVPEATVAPDPKVPKGAISRI*VEVQPP Trigger: TGGAGGCTGGACCTCGACGCAGATTCTGCTGATGGC...TCCCTTGGGGACTTTGGGATCAGGAGCCACTGTAGCCTCAGGAACCTGTCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015920.12 |
||
| CDS-3UTR GCA 90 bp | TGGCCCTGGCCTGGACAGGTTCCTGAGGCTACAGTGGCTCCTGATCCCAAAGTCGTAGCCCGAGACACCTaGGTCTCATCCTCAATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: WPWPGQVPEATVAPDPKVVARDT*VSSSIL Trigger: CAAGATTGAGGATGAGACGCAGGTGTCTCGGGCTAC...GACTTTGGGATCAGGAGCCACTGTAGCCTCAGGAACCTGTCCAGGCCAGGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 |
||
| CDS-3UTR CCA 90 bp | GAGGCTACAGTGGCTCCTGATCCCAAAGTCCCCAAGGGAGCTAAAACTGAAAAACCAGGGCCACCACCATaGGAGTGGACAGGGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: EATVAPDPKVPKGAKTEKPGPPP*EWTGAA Trigger: TGCAGCCCCTGTCCACTCCCATGGTGGTGGCCCTGG...TTTTTCAGTTTTAGCTCCCTTGGGGACTTTGGGATCAGGAGCCACTGTAGCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000015920.12 |
||
| CDS-3UTR TCA 90 bp | GGAAGGGAGCCACCTGCTGTAAATAACTGGACAGCATTCCCCAACCATCACGGGGAGCCGCTTGTTGTATaGCTGCAGCAGCGTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GREPPAVNNWTAFPNHHGEPLVV*LQQRLL Trigger: AAGGAGACGCTGCTGCAGTCATACAACAAGCGGCTC...CCCGTGATGGTTGGGGAATGCTGTCCAGTTATTTACAGCAGGTGGCTCCCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
||
| CDS-3UTR GCA 90 bp | CCAACCATCACGGGGAACTGGCCCTGGCCTGGACAGGTTCCTGAGGCTACAGTGTTGAGGATCAGAAACTaGTTGAGATCGGATACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PTITGNWPWPGQVPEATVLRIRN*LRSDTS Trigger: GCTGGTATCCGATCTCAAGCAGTTTCTGATCCTCAA...CACTGTAGCCTCAGGAACCTGTCCAGGCCAGGGCCAGTTCCCCGTGATGGTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 |
||
| 3UTR CAA 72 bp | TGTGCTGGCCCCTCTGCTAAGCGGTTCTGGCCACTCTaGCATCCAAAGAAAGGTGGTGTCAACAGGCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: CAGPSAKRFWPL*HPKKGGVNRPC Trigger: ACATGGCCTGTTGACACCACCTTTCTTTGGATGCAAGAGTGGCCAGAACCGCTTAGCAGAGGGGCCAGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
||
| CDS-3UTR GCA 90 bp | TGGCCCTGGCCTGGACAGGTTCCTGAGGCTACAGTGGCTCCTGATCCCAAAGTCTTGAGGATCAGAAACTaGTTGAGATCGGATACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WPWPGQVPEATVAPDPKVLRIRN*LRSDTS Trigger: GCTGGTATCCGATCTCAAGCAGTTTCTGATCCTCAA...GACTTTGGGATCAGGAGCCACTGTAGCCTCAGGAACCTGTCCAGGCCAGGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 |
||
| CDS-3UTR GCA 90 bp | CTCAGTGGTCATAGCAGTGGCTACTTGGACCACATCTGTTTCTACAGCTGTCTAGCAGCAGCGTCTCCTTaGTCTGGGGAAGGGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSGHSSGYLDHICFYSCLAAASP*SGEGLS Trigger: AGAGAGCCCTTCCCCAGAGCAAGGAGACGCTGCTGC...TAGACAGCTGTAGAAACAGATGTGGTCCAAGTAGCCACTGCTATGACCACTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
||
| 3UTR CAA 72 bp | AGGAAGACACCCTGGCTAGCTGCCTCTCACACAATCTaGGACAGTCAGCTGTGGCAGAGACATTTATGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RKTPWLAASHTI*DSQLWQRHLCS Trigger: GGAGCATAAATGTCTCTGCCACAGCTGACTGTCCAAGATTGTGTGAGAGGCAGCTAGCCAGGGTGTCTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
||
| CDS-3UTR CCA 90 bp | GTTCCTGAGGCTACAGTGGCTCCTGATCCCAAAGTCCCCAAGGGAGCTAAAACTAGCTGCTGGTTACGCTaGTCGATGGCTTCATTCACA | + |
|
Preference number: 4 (lower is better) Translates to: VPEATVAPDPKVPKGAKTSCWLR*SMASFT Trigger: TGTGAATGAAGCCATCGACCAGCGTAACCAGCAGCT...AGTTTTAGCTCCCTTGGGGACTTTGGGATCAGGAGCCACTGTAGCCTCAGGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 |
||
| CDS-3UTR TCA 90 bp | GTTCCTGAGGCTACAGTGGCTCCTGATCCCAAAGTCCCCAAGGGAGCTAAAACTGGATCAGAAACTGCTTaGGATCGGATACCAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VPEATVAPDPKVPKGAKTGSETA*DRIPAS Trigger: TGAAGCTGGTATCCGATCTCAAGCAGTTTCTGATCC...AGTTTTAGCTCCCTTGGGGACTTTGGGATCAGGAGCCACTGTAGCCTCAGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 |
||
| CDS-3UTR TCA 90 bp | ATTCAACAGTCTCATCTCAAAAGTAGCAGAAGGAAATGGTGGGAGAATCCAGGATTGTCCTGTTCGCCCTaGGTAGCCCGAGACACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IQQSHLKSSRRKWWENPGLSCSP*VARDTC Trigger: GCAGGTGTCTCGGGCTACTCAGGGCGAACAGGACAA...TCCTGGATTCTCCCACCATTTCCTTCTGCTACTTTTGAGATGAGACTGTTGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
||
| 3UTR CAA 72 bp | CTGGGTTCCTATCTGAGCAATTTATCCCCTCAACCCTaGTACAGGACTGAGTCACTGTCCCAGTACTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LGSYLSNLSPQP*YRTESLSQYSS Trigger: GGATGAGTACTGGGACAGTGACTCAGTCCTGTACAAGGGTTGAGGGGATAAATTGCTCAGATAGGAACCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
||
| CDS-3UTR CCA 90 bp | GGTCATAGCAGTGGCTACTTGGACCACATCTGTTTCTACAGCTGTCTAATATGCAGCTGCTGGTTACGCTaGTCGATGGCTTCATTCACA | + |
|
Preference number: 4 (lower is better) Translates to: GHSSGYLDHICFYSCLICSCWLR*SMASFT Trigger: TGTGAATGAAGCCATCGACCAGCGTAACCAGCAGCT...GCATATTAGACAGCTGTAGAAACAGATGTGGTCCAAGTAGCCACTGCTATGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
||
| 3UTR CAA 72 bp | CAGCCCGGTTCCGACGACATATTTTACACTGGACTCTaGATTTCTCAAGGCCTCTCTGGATCAGAAAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QPGSDDIFYTGL*ISQGLSGSESF Trigger: GAAACTTTCTGATCCAGAGAGGCCTTGAGAAATCAAGAGTCCAGTGTAAAATATGTCGTCGGAACCGGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
||
| CDS-3UTR CAA 90 bp | ACTGGACAGCATTCCCCAACCATCACGGGGAACTGGCCCTGGCCTGGACAGGTTTGCAGCAGCGTCTCCTaGCTCTGGGGAAGGGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: TGQHSPTITGNWPWPGQVCSSVS*LWGRAL Trigger: GAGAGCCCTTCCCCAGAGCAAGGAGACGCTGCTGCA...AACCTGTCCAGGCCAGGGCCAGTTCCCCGTGATGGTTGGGGAATGCTGTCCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 |
||
| CDS GCA 90 bp | GAGACCTCGTCCCGCAGGGTGATGAGCTTGCGGTCACACTCCTCCTaGAGGGCTCGAAGCTGCTGGTTACGCTGGTCGATGGCTTCATTC | + |
|
Preference number: 5 (lower is better) Translates to: ETSSRRVMSLRSHSS*RARSCWLRWSMASF Trigger: GAATGAAGCCATCGACCAGCGTAACCAGCAGCTTCGAGCCCTGCAGGAGGAGTGTGACCGCAAGCTCATCACCCTGCGGGACGAGGTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 ENSMUST00000139815.2 |
||
| CDS GCA 90 bp | AGGGTGATGAGCTTGCGGTCACACTCCTCCTGCAGGGCTCGAAGCTaGTGGTTACGCTGGTCGATGGCTTCATTCACAGACGGGAAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: RVMSLRSHSSCRARS*WLRWSMASFTDGKS Trigger: CGACTTCCCGTCTGTGAATGAAGCCATCGACCAGCGTAACCAGCAGCTTCGAGCCCTGCAGGAGGAGTGTGACCGCAAGCTCATCACCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 ENSMUST00000139815.2 |
||
| CDS-3UTR CAA 90 bp | CCACCTGCTGTAAATAACTGGACAGCATTCCCCAACCATCACGGGGAACTGGCCTGCAGCAGCGTCTCCTaGCTCTGGGGAAGGGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PPAVNNWTAFPNHHGELACSSVS*LWGRAL Trigger: GAGAGCCCTTCCCCAGAGCAAGGAGACGCTGCTGCA...GGCCAGTTCCCCGTGATGGTTGGGGAATGCTGTCCAGTTATTTACAGCAGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 |
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| CDS-3UTR CAA 90 bp | GGCCTGGACAGGTTCCTGAGGCTACAGTGGCTCCTGATCCCAAAGTCCCCAAGGTCGTCTTTGAGCCGCTaGTTGTATGACTGCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GLDRFLRLQWLLIPKSPRSSLSR*LYDCSS Trigger: GCTGCTGCAGTCATACAACAAGCGGCTCAAAGACGA...CCTTGGGGACTTTGGGATCAGGAGCCACTGTAGCCTCAGGAACCTGTCCAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 |
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| CDS-3UTR CAA 90 bp | TCCCCAACCATCACGGGGAACTGGCCCTGGCCTGGACAGGTTCCTGAGGCTACATTGTCCATGATGGACTaGATGTCGTCTTTGAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SPTITGNWPWPGQVPEATLSMMD*MSSLSR Trigger: GCGGCTCAAAGACGACATCAAGTCCATCATGGACAA...TGTAGCCTCAGGAACCTGTCCAGGCCAGGGCCAGTTCCCCGTGATGGTTGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 |
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| CDS-3UTR CAA 90 bp | CCAACCATCACGGGGAACTGGCCCTGGCCTGGACAGGTTCCTGAGGCTACAGTGGTCTCATCCTCAATCTaGGCGGTCTTGATGATCTCG | + |
|
Preference number: 5 (lower is better) Translates to: PTITGNWPWPGQVPEATVVSSSI*AVLMIS Trigger: CGAGATCATCAAGACCGCCAAGATTGAGGATGAGAC...CACTGTAGCCTCAGGAACCTGTCCAGGCCAGGGCCAGTTCCCCGTGATGGTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 |
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| CDS-3UTR CAA 90 bp | GTTCCTGAGGCTACAGTGGCTCCTGATCCCAAAGTCCCCAAGGGAGCTAAAACTCGCAGGGTGATGAGCTaGCGGTCACACTCCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VPEATVAPDPKVPKGAKTRRVMS*RSHSSC Trigger: GCAGGAGGAGTGTGACCGCAAGCTCATCACCCTGCG...AGTTTTAGCTCCCTTGGGGACTTTGGGATCAGGAGCCACTGTAGCCTCAGGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 |
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| CDS GCA 90 bp | TCCATGATGGACTTGATGTCGTCTTTGAGCCGCTTGTTGTATGACTaGAGCAGCGTCTCCTTGCTCTGGGGAAGGGCTCTCTGCTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SMMDLMSSLSRLLYD*SSVSLLWGRALCWA Trigger: GGCCCAGCAGAGAGCCCTTCCCCAGAGCAAGGAGACGCTGCTGCAGTCATACAACAAGCGGCTCAAAGACGACATCAAGTCCATCATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 ENSMUST00000139815.2 |
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| CDS GCA 90 bp | CAGACACAGTGGCCCTGCTCTGTGTACGTGCTGCTGAGCCAGCAGTaGATCCTGGAAGTCTGGTTTACGTTGATGTTGGCTGCTCGAACG | + |
|
Preference number: 5 (lower is better) Translates to: QTQWPCSVYVLLSQQ*ILEVWFTLMLAART Trigger: CGTTCGAGCAGCCAACATCAACGTAAACCAGACTTCCAGGATGCACTGCTGGCTCAGCAGCACGTACACAGAGCAGGGCCACTGTGTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139815.2 |
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| CDS CCA 90 bp | TTGCGGTCACACTCCTCCTGCAGGGCTCGAAGCTGCTGGTTACGCTaGTCGATGGCTTCATTCACAGACGGGAAGTCGTTGAGGATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LRSHSSCRARSCWLR*SMASFTDGKSLRIR Trigger: TCTGATCCTCAACGACTTCCCGTCTGTGAATGAAGCCATCGACCAGCGTAACCAGCAGCTTCGAGCCCTGCAGGAGGAGTGTGACCGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 ENSMUST00000139815.2 |
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| CDS-3UTR CAA 90 bp | ACTGGACAGCATTCCCCAACCATCACGGGGAACTGGCCCTGGCCTGGACAGGTTGTCTCATCCTCAATCTaGGCGGTCTTGATGATCTCG | + |
|
Preference number: 5 (lower is better) Translates to: TGQHSPTITGNWPWPGQVVSSSI*AVLMIS Trigger: CGAGATCATCAAGACCGCCAAGATTGAGGATGAGAC...AACCTGTCCAGGCCAGGGCCAGTTCCCCGTGATGGTTGGGGAATGCTGTCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 |
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| CDS-3UTR CAA 90 bp | TGGCCTGGACAGGTTCCTGAGGCTACAGTGGCTCCTGATCCCAAAGTCCCCAAGTTGTCCATGATGGACTaGATGTCGTCTTTGAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: WPGQVPEATVAPDPKVPKLSMMD*MSSLSR Trigger: GCGGCTCAAAGACGACATCAAGTCCATCATGGACAA...CTTGGGGACTTTGGGATCAGGAGCCACTGTAGCCTCAGGAACCTGTCCAGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 |
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| CDS TCA 90 bp | GTTGTCCATGATGGACTTGATGTCGTCTTTGAGCCGCTTGTTGTATaGCTGCAGCAGCGTCTCCTTGCTCTGGGGAAGGGCTCTCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VVHDGLDVVFEPLVV*LQQRLLALGKGSLL Trigger: CAGCAGAGAGCCCTTCCCCAGAGCAAGGAGACGCTGCTGCAGTCATACAACAAGCGGCTCAAAGACGACATCAAGTCCATCATGGACAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 ENSMUST00000139815.2 |
||
| CDS-3UTR CAA 90 bp | CTCAGTGGTCATAGCAGTGGCTACTTGGACCACATCTGTTTCTACAGCTGTCTACGCAGGGTGATGAGCTaGCGGTCACACTCCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSGHSSGYLDHICFYSCLRRVMS*RSHSSC Trigger: GCAGGAGGAGTGTGACCGCAAGCTCATCACCCTGCG...TAGACAGCTGTAGAAACAGATGTGGTCCAAGTAGCCACTGCTATGACCACTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| CDS-3UTR CAA 90 bp | CCTGAGGCTACAGTGGCTCCTGATCCCAAAGTCCCCAAGGGAGCTAAAACTGAATCTTTGAGCCGCTTGTaGTATGACTGCAGCAGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: PEATVAPDPKVPKGAKTESLSRL*YDCSSV Trigger: GACGCTGCTGCAGTCATACAACAAGCGGCTCAAAGA...TTCAGTTTTAGCTCCCTTGGGGACTTTGGGATCAGGAGCCACTGTAGCCTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 |
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| CDS GCA 90 bp | GAGCCAGCAGTGCATCCTGGAAGTCTGGTTTACGTTGATGTTGGCTaGTCGAACGTGCATCTCATAATTGTCCTGTTCGCCCTGAGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: EPAVHPGSLVYVDVG*SNVHLIIVLFALSS Trigger: GCTACTCAGGGCGAACAGGACAATTATGAGATGCACGTTCGAGCAGCCAACATCAACGTAAACCAGACTTCCAGGATGCACTGCTGGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139815.2 |
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| CDS-3UTR CAA 90 bp | CCACCTGCTGTAAATAACTGGACAGCATTCCCCAACCATCACGGGGAACTGGCCGACTTGATGTCGTCTTaGAGCCGCTTGTTGTATGAC | + |
|
Preference number: 5 (lower is better) Translates to: PPAVNNWTAFPNHHGELADLMSS*SRLLYD Trigger: GTCATACAACAAGCGGCTCAAAGACGACATCAAGTC...GGCCAGTTCCCCGTGATGGTTGGGGAATGCTGTCCAGTTATTTACAGCAGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 |
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| CDS GCA 90 bp | TCGATGGCTTCATTCACAGACGGGAAGTCGTTGAGGATCAGAAACTaGTTGAGATCGGATACCAGCTTCATCAGTGACTCACCAGCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: SMASFTDGKSLRIRN*LRSDTSFISDSPAR Trigger: TCGAGCTGGTGAGTCACTGATGAAGCTGGTATCCGATCTCAAGCAGTTTCTGATCCTCAACGACTTCCCGTCTGTGAATGAAGCCATCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 ENSMUST00000139815.2 |
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| CDS-3UTR CAA 90 bp | AGAGGCAGGTCATTAGCTTCGCAGAGACTTGAGCTTTGCCACCACAAGAAACCCTCAATCTTGGCGGTCTaGATGATCTCGGTGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RGRSLASQRLELCHHKKPSILAV*MISVKL Trigger: CAACTTCACCGAGATCATCAAGACCGCCAAGATTGA...GGGTTTCTTGTGGTGGCAAAGCTCAAGTCTCTGCGAAGCTAATGACCTGCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| CDS-3UTR CAA 90 bp | AAAAAGCTAGGCTGTGCTGGGTATCCACAGCACTTCCTTTCTGATAAACTAGGCTCTTTGAGCCGCTTGTaGTATGACTGCAGCAGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: KKLGCAGYPQHFLSDKLGSLSRL*YDCSSV Trigger: GACGCTGCTGCAGTCATACAACAAGCGGCTCAAAGA...GCCTAGTTTATCAGAAAGGAAGTGCTGTGGATACCCAGCACAGCCTAGCTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 |
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| CDS-3UTR CAA 90 bp | AGAGAGGTGATTGCCCAAAGAGGACACAGATCATCCCAGAAACGTATGCACGTGGACTTGATGTCGTCTTaGAGCCGCTTGTTGTATGAC | + |
|
Preference number: 5 (lower is better) Translates to: REVIAQRGHRSSQKRMHVDLMSS*SRLLYD Trigger: GTCATACAACAAGCGGCTCAAAGACGACATCAAGTC...CACGTGCATACGTTTCTGGGATGATCTGTGTCCTCTTTGGGCAATCACCTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102899.10 |
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| CDS TCA 90 bp | GTTGAGGATCAGAAACTGCTTGAGATCGGATACCAGCTTCATCAGTaGCTCACCAGCTCGAACCTGCACCATCGTAATCAGGGTAAAATA | + |
|
Preference number: 5 (lower is better) Translates to: VEDQKLLEIGYQLHQ*LTSSNLHHRNQGKI Trigger: TATTTTACCCTGATTACGATGGTGCAGGTTCGAGCTGGTGAGTCACTGATGAAGCTGGTATCCGATCTCAAGCAGTTTCTGATCCTCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139815.2 |
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| CDS GCA 90 bp | TTGAGATCGGATACCAGCTTCATCAGTGACTCACCAGCTCGAACCTaGACCATCGTAATCAGGGTAAAATATAAAAGGAGGCAGACACAG | + |
|
Preference number: 5 (lower is better) Translates to: LRSDTSFISDSPART*TIVIRVKYKRRQTQ Trigger: CTGTGTCTGCCTCCTTTTATATTTTACCCTGATTACGATGGTGCAGGTTCGAGCTGGTGAGTCACTGATGAAGCTGGTATCCGATCTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139815.2 |
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| CDS-3UTR CAA 90 bp | AAAAAGCTAGGCTGTGCTGGGTATCCACAGCACTTCCTTTCTGATAAACTAGGCTCAATCTTGGCGGTCTaGATGATCTCGGTGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KKLGCAGYPQHFLSDKLGSILAV*MISVKL Trigger: CAACTTCACCGAGATCATCAAGACCGCCAAGATTGA...GCCTAGTTTATCAGAAAGGAAGTGCTGTGGATACCCAGCACAGCCTAGCTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 |
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| CDS GCA 72 bp | TCCCGCAGGGTGATGAGCTTGCGGTCACACTCCTCCTaGAGGGCTCGAAGCTGCTGGTTACGCTGGTCGATG | + |
|
Preference number: 6 (lower is better) Translates to: SRRVMSLRSHSS*RARSCWLRWSM Trigger: CATCGACCAGCGTAACCAGCAGCTTCGAGCCCTGCAGGAGGAGTGTGACCGCAAGCTCATCACCCTGCGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 ENSMUST00000139815.2 |
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| CDS CAA 90 bp | AGCTCATATAGGTCAATGGAGACCTCGTCCCGCAGGGTGATGAGCTaGCGGTCACACTCCTCCTGCAGGGCTCGAAGCTGCTGGTTACGC | + |
|
Preference number: 6 (lower is better) Translates to: SSYRSMETSSRRVMS*RSHSSCRARSCWLR Trigger: GCGTAACCAGCAGCTTCGAGCCCTGCAGGAGGAGTGTGACCGCAAGCTCATCACCCTGCGGGACGAGGTCTCCATTGACCTATATGAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 ENSMUST00000139815.2 |
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| CDS CCA 72 bp | CACTCCTCCTGCAGGGCTCGAAGCTGCTGGTTACGCTaGTCGATGGCTTCATTCACAGACGGGAAGTCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: HSSCRARSCWLR*SMASFTDGKSL Trigger: CAACGACTTCCCGTCTGTGAATGAAGCCATCGACCAGCGTAACCAGCAGCTTCGAGCCCTGCAGGAGGAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 ENSMUST00000139815.2 |
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| CDS TCA 72 bp | GATGGACTTGATGTCGTCTTTGAGCCGCTTGTTGTATaGCTGCAGCAGCGTCTCCTTGCTCTGGGGAAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: DGLDVVFEPLVV*LQQRLLALGKG Trigger: GCCCTTCCCCAGAGCAAGGAGACGCTGCTGCAGTCATACAACAAGCGGCTCAAAGACGACATCAAGTCCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 ENSMUST00000139815.2 |
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| CDS GCA 72 bp | GACTTGATGTCGTCTTTGAGCCGCTTGTTGTATGACTaGAGCAGCGTCTCCTTGCTCTGGGGAAGGGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: DLMSSLSRLLYD*SSVSLLWGRAL Trigger: GAGAGCCCTTCCCCAGAGCAAGGAGACGCTGCTGCAGTCATACAACAAGCGGCTCAAAGACGACATCAAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 ENSMUST00000139815.2 |
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| CDS CCA 72 bp | TACGTGCTGCTGAGCCAGCAGTGCATCCTGGAAGTCTaGTTTACGTTGATGTTGGCTGCTCGAACGTGCATC | + |
|
Preference number: 6 (lower is better) Translates to: YVLLSQQCILEV*FTLMLAARTCI Trigger: GATGCACGTTCGAGCAGCCAACATCAACGTAAACCAGACTTCCAGGATGCACTGCTGGCTCAGCAGCACGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139815.2 |
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| CDS CAA 90 bp | GTGAAGTTGTCCATGATGGACTTGATGTCGTCTTTGAGCCGCTTGTaGTATGACTGCAGCAGCGTCTCCTTGCTCTGGGGAAGGGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: VKLSMMDLMSSLSRL*YDCSSVSLLWGRAL Trigger: GAGAGCCCTTCCCCAGAGCAAGGAGACGCTGCTGCAGTCATACAACAAGCGGCTCAAAGACGACATCAAGTCCATCATGGACAACTTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 ENSMUST00000139815.2 |
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| CDS CAA 90 bp | TCGGTGAAGTTGTCCATGATGGACTTGATGTCGTCTTTGAGCCGCTaGTTGTATGACTGCAGCAGCGTCTCCTTGCTCTGGGGAAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SVKLSMMDLMSSLSR*LYDCSSVSLLWGRA Trigger: AGCCCTTCCCCAGAGCAAGGAGACGCTGCTGCAGTCATACAACAAGCGGCTCAAAGACGACATCAAGTCCATCATGGACAACTTCACCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 ENSMUST00000139815.2 |
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| CDS GCA 72 bp | AGGGTAAAATATAAAAGGAGGCAGACACAGTGGCCCTaGTCTGTGTACGTGCTGCTGAGCCAGCAGTGCATC | + |
|
Preference number: 6 (lower is better) Translates to: RVKYKRRQTQWP*SVYVLLSQQCI Trigger: GATGCACTGCTGGCTCAGCAGCACGTACACAGAGCAGGGCCACTGTGTCTGCCTCCTTTTATATTTTACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139815.2 |
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| CDS CAA 72 bp | TCCATGATGGACTTGATGTCGTCTTTGAGCCGCTTGTaGTATGACTGCAGCAGCGTCTCCTTGCTCTGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SMMDLMSSLSRL*YDCSSVSLLWG Trigger: TCCCCAGAGCAAGGAGACGCTGCTGCAGTCATACAACAAGCGGCTCAAAGACGACATCAAGTCCATCATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 ENSMUST00000139815.2 |
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| CDS TCA 72 bp | CAGAAACTGCTTGAGATCGGATACCAGCTTCATCAGTaGCTCACCAGCTCGAACGATGTTGGCTGCTCGAAC | + |
|
Preference number: 6 (lower is better) Translates to: QKLLEIGYQLHQ*LTSSNDVGCSN Trigger: GTTCGAGCAGCCAACATCGTTCGAGCTGGTGAGTCACTGATGAAGCTGGTATCCGATCTCAAGCAGTTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 |
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| CDS CAA 72 bp | TTGTCCATGATGGACTTGATGTCGTCTTTGAGCCGCTaGTTGTATGACTGCAGCAGCGTCTCCTTGCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LSMMDLMSSLSR*LYDCSSVSLLW Trigger: CCAGAGCAAGGAGACGCTGCTGCAGTCATACAACAAGCGGCTCAAAGACGACATCAAGTCCATCATGGACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 ENSMUST00000139815.2 |
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| CDS CAA 72 bp | TCGGTGAAGTTGTCCATGATGGACTTGATGTCGTCTTaGAGCCGCTTGTTGTATGACTGCAGCAGCGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SVKLSMMDLMSS*SRLLYDCSSVS Trigger: GGAGACGCTGCTGCAGTCATACAACAAGCGGCTCAAAGACGACATCAAGTCCATCATGGACAACTTCACCGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 ENSMUST00000139815.2 |
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| CDS CAA 90 bp | TTGATGATCTCGGTGAAGTTGTCCATGATGGACTTGATGTCGTCTTaGAGCCGCTTGTTGTATGACTGCAGCAGCGTCTCCTTGCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LMISVKLSMMDLMSS*SRLLYDCSSVSLLW Trigger: CCAGAGCAAGGAGACGCTGCTGCAGTCATACAACAAGCGGCTCAAAGACGACATCAAGTCCATCATGGACAACTTCACCGAGATCATCAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 ENSMUST00000139815.2 |
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| CDS CAA 90 bp | ATCTTGGCGGTCTTGATGATCTCGGTGAAGTTGTCCATGATGGACTaGATGTCGTCTTTGAGCCGCTTGTTGTATGACTGCAGCAGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: ILAVLMISVKLSMMD*MSSLSRLLYDCSSV Trigger: GACGCTGCTGCAGTCATACAACAAGCGGCTCAAAGACGACATCAAGTCCATCATGGACAACTTCACCGAGATCATCAAGACCGCCAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 ENSMUST00000139815.2 |
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| CDS CAA 90 bp | ATGGCTTCATTCACAGACGGGAAGTCGTTGAGGATCAGAAACTGCTaGAGATCGGATACCAGCTTCATCAGTGACTCACCAGCTCGAACG | + |
|
Preference number: 6 (lower is better) Translates to: MASFTDGKSLRIRNC*RSDTSFISDSPART Trigger: CGTTCGAGCTGGTGAGTCACTGATGAAGCTGGTATCCGATCTCAAGCAGTTTCTGATCCTCAACGACTTCCCGTCTGTGAATGAAGCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 |
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| CDS CAA 90 bp | TGCTGGTTACGCTGGTCGATGGCTTCATTCACAGACGGGAAGTCGTaGAGGATCAGAAACTGCTTGAGATCGGATACCAGCTTCATCAGT | + |
|
Preference number: 6 (lower is better) Translates to: CWLRWSMASFTDGKS*RIRNCLRSDTSFIS Trigger: ACTGATGAAGCTGGTATCCGATCTCAAGCAGTTTCTGATCCTCAACGACTTCCCGTCTGTGAATGAAGCCATCGACCAGCGTAACCAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 ENSMUST00000139815.2 |
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| CDS CAA 90 bp | ATGGCTTCATTCACAGACGGGAAGTCGTTGAGGATCAGAAACTGCTaGAGATCGGATACCAGCTTCATCAGTGACTCACCAGCTCGAACC | + |
|
Preference number: 6 (lower is better) Translates to: MASFTDGKSLRIRNC*RSDTSFISDSPART Trigger: GGTTCGAGCTGGTGAGTCACTGATGAAGCTGGTATCCGATCTCAAGCAGTTTCTGATCCTCAACGACTTCCCGTCTGTGAATGAAGCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139815.2 |
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| CDS TCA 72 bp | CAGAAACTGCTTGAGATCGGATACCAGCTTCATCAGTaGCTCACCAGCTCGAACCTGCACCATCGTAATCAG | + |
|
Preference number: 6 (lower is better) Translates to: QKLLEIGYQLHQ*LTSSNLHHRNQ Trigger: CTGATTACGATGGTGCAGGTTCGAGCTGGTGAGTCACTGATGAAGCTGGTATCCGATCTCAAGCAGTTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139815.2 |
||
| CDS GCA 72 bp | GTGCATCCTGGAAGTCTGGTTTACGTTGATGTTGGCTaGTCGAACGTGCATCTCATAATTGTCCTGTTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: VHPGSLVYVDVG*SNVHLIIVLFA Trigger: GGCGAACAGGACAATTATGAGATGCACGTTCGAGCAGCCAACATCAACGTAAACCAGACTTCCAGGATGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139815.2 |
||
| CDS CAA 72 bp | TTCACAGACGGGAAGTCGTTGAGGATCAGAAACTGCTaGAGATCGGATACCAGCTTCATCAGTGACTCACCA | + |
|
Preference number: 6 (lower is better) Translates to: FTDGKSLRIRNC*RSDTSFISDSP Trigger: TGGTGAGTCACTGATGAAGCTGGTATCCGATCTCAAGCAGTTTCTGATCCTCAACGACTTCCCGTCTGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 ENSMUST00000139815.2 |
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| CDS CAA 90 bp | TGCGTCTCATCCTCAATCTTGGCGGTCTTGATGATCTCGGTGAAGTaGTCCATGATGGACTTGATGTCGTCTTTGAGCCGCTTGTTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: CVSSSILAVLMISVK*SMMDLMSSLSRLLY Trigger: ATACAACAAGCGGCTCAAAGACGACATCAAGTCCATCATGGACAACTTCACCGAGATCATCAAGACCGCCAAGATTGAGGATGAGACGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 ENSMUST00000139815.2 |
||
| CDS GCA 72 bp | TCATTCACAGACGGGAAGTCGTTGAGGATCAGAAACTaGTTGAGATCGGATACCAGCTTCATCAGTGACTCA | + |
|
Preference number: 6 (lower is better) Translates to: SFTDGKSLRIRN*LRSDTSFISDS Trigger: TGAGTCACTGATGAAGCTGGTATCCGATCTCAAGCAGTTTCTGATCCTCAACGACTTCCCGTCTGTGAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 ENSMUST00000139815.2 |
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| CDS CAA 72 bp | GTCTTGATGATCTCGGTGAAGTTGTCCATGATGGACTaGATGTCGTCTTTGAGCCGCTTGTTGTATGACTGC | + |
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Preference number: 6 (lower is better) Translates to: VLMISVKLSMMD*MSSLSRLLYDC Trigger: GCAGTCATACAACAAGCGGCTCAAAGACGACATCAAGTCCATCATGGACAACTTCACCGAGATCATCAAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015920.12 ENSMUST00000102899.10 ENSMUST00000139815.2 |
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| CDS GCA 72 bp | GATACCAGCTTCATCAGTGACTCACCAGCTCGAACCTaGACCATCGTAATCAGGGTAAAATATAAAAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: DTSFISDSPART*TIVIRVKYKRR Trigger: CCTCCTTTTATATTTTACCCTGATTACGATGGTGCAGGTTCGAGCTGGTGAGTCACTGATGAAGCTGGTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139815.2 |
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