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Pregenerated sensors for MED21 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030291

Ensembl transcript IDs: ENSMUST00000032429.9, ENSMUST00000204040.2

Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GATACGATAAAAGTCAGAACTGGGGGAAGTATGGCCCAGTGGCAATaGGCTTACCTAGCATACACAAGATGCACAAGATCTGGGTTCCAT +
Preference number: 1 (lower is better)
Translates to: DTIKVRTGGSMAQWQ*AYLAYTRCTRSGFH
Trigger: ATGGAACCCAGATCTTGTGCATCTTGTGTATGCTAGGTAAGCGCATTGCCACTGGGCCATACTTCCCCCAGTTCTGACTTTTATCGTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000204040.2
3UTR GCA 90 bp GCTTACCTAGCATACACAAGATGCACAAGATCTGGGTTCCATCTCTaGAATCTGATGTGCAGCATTCTTAATGCCATTCAAACAGTTCTT +
Preference number: 1 (lower is better)
Translates to: AYLAYTRCTRSGFHL*NLMCSILNAIQTVL
Trigger: AAGAACTGTTTGAATGGCATTAAGAATGCTGCACATCAGATTGCAGAGATGGAACCCAGATCTTGTGCATCTTGTGTATGCTAGGTAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204040.2
3UTR GCA 90 bp TACACAAGATGCACAAGATCTGGGTTCCATCTCTGCAATCTGATGTaGAGCATTCTTAATGCCATTCAAACAGTTCTTTTCTCTGTCACA +
Preference number: 1 (lower is better)
Translates to: YTRCTRSGFHLCNLM*SILNAIQTVLFSVT
Trigger: TGTGACAGAGAAAAGAACTGTTTGAATGGCATTAAGAATGCTGCACATCAGATTGCAGAGATGGAACCCAGATCTTGTGCATCTTGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000204040.2
3UTR-3UTR GCA 90 bp AACTGGGGGAAGTATGGCCCAGTGGCAATGCGCTTACCTAGCATACACAAGATGTCTGGGTTCCATCTCTaGAATCTGATGTGCAGCATT +
Preference number: 2 (lower is better)
Translates to: NWGKYGPVAMRLPSIHKMSGFHL*NLMCSI
Trigger: AATGCTGCACATCAGATTGCAGAGATGGAACCCAGA...CATCTTGTGTATGCTAGGTAAGCGCATTGCCACTGGGCCATACTTCCCCCAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000204040.2
3UTR GCA 72 bp AAAGTCAGAACTGGGGGAAGTATGGCCCAGTGGCAATaGGCTTACCTAGCATACACAAGATGCACAAGATCT +
Preference number: 3 (lower is better)
Translates to: KVRTGGSMAQWQ*AYLAYTRCTRS
Trigger: AGATCTTGTGCATCTTGTGTATGCTAGGTAAGCGCATTGCCACTGGGCCATACTTCCCCCAGTTCTGACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000204040.2
3UTR CCA 72 bp ATGCGCTTACCTAGCATACACAAGATGCACAAGATCTaGGTTCCATCTCTGCAATCTGATGTGCAGCATTCT +
Preference number: 3 (lower is better)
Translates to: MRLPSIHKMHKI*VPSLQSDVQHS
Trigger: AGAATGCTGCACATCAGATTGCAGAGATGGAACCCAGATCTTGTGCATCTTGTGTATGCTAGGTAAGCGCAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204040.2
3UTR TCA 72 bp CAAGATGCACAAGATCTGGGTTCCATCTCTGCAATCTaGTGTGCAGCATTCTTAATGCCATTCAAACAGTTC +
Preference number: 3 (lower is better)
Translates to: QDAQDLGSISAI*CAAFLMPFKQF
Trigger: GAACTGTTTGAATGGCATTAAGAATGCTGCACATCAGATTGCAGAGATGGAACCCAGATCTTGTGCATCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204040.2
3UTR GCA 72 bp GCATACACAAGATGCACAAGATCTGGGTTCCATCTCTaGAATCTGATGTGCAGCATTCTTAATGCCATTCAA +
Preference number: 3 (lower is better)
Translates to: AYTRCTRSGFHL*NLMCSILNAIQ
Trigger: TTGAATGGCATTAAGAATGCTGCACATCAGATTGCAGAGATGGAACCCAGATCTTGTGCATCTTGTGTATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204040.2
3UTR GCA 72 bp TGCACAAGATCTGGGTTCCATCTCTGCAATCTGATGTaGAGCATTCTTAATGCCATTCAAACAGTTCTTTTC +
Preference number: 3 (lower is better)
Translates to: CTRSGFHLCNLM*SILNAIQTVLF
Trigger: GAAAAGAACTGTTTGAATGGCATTAAGAATGCTGCACATCAGATTGCAGAGATGGAACCCAGATCTTGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000204040.2
CDS-3UTR GCA 90 bp GTCAGAACTGGGGGAAGTATGGCCCAGTGGCAATGCGCTTACCTAGCATACACAATTACAAAACTGATCTaGAAGCGAGTTCACAGCGTC +
Preference number: 4 (lower is better)
Translates to: VRTGGSMAQWQCAYLAYTITKLI*KRVHSV
Trigger: GACGCTGTGAACTCGCTTGCAGATCAGTTTTGTAAT...TGTGTATGCTAGGTAAGCGCATTGCCACTGGGCCATACTTCCCCCAGTTCTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000204040.2
CDS-3UTR GCA 90 bp GGCTTACATCTGATGTGCAGCATTCTTAATGCCATTCAAACAGTTCTTTTCTCTGCAGGAGGACCACACTaGTGTAATACACCAATGGCA +
Preference number: 4 (lower is better)
Translates to: GLHLMCSILNAIQTVLFSAGGPH*CNTPMA
Trigger: TGCCATTGGTGTATTACAGCAGTGTGGTCCTCCTGC...AGAGAAAAGAACTGTTTGAATGGCATTAAGAATGCTGCACATCAGATGTAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032429.9
CDS-3UTR GCA 90 bp CTCTGCAATCTGATGTGCAGCATTCTTAATGCCATTCAAACAGTTCTTTTCTCTGCAGGAGGACCACACTaGTGTAATACACCAATGGCA +
Preference number: 4 (lower is better)
Translates to: LCNLMCSILNAIQTVLFSAGGPH*CNTPMA
Trigger: TGCCATTGGTGTATTACAGCAGTGTGGTCCTCCTGC...AGAGAAAAGAACTGTTTGAATGGCATTAAGAATGCTGCACATCAGATTGCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000204040.2
CDS-3UTR GCA 90 bp GGCTTACATCTGATGTGCAGCATTCTTAATGCCATTCAAACAGTTCTTTTCTCTTGCAATGTCAGCAAGTaGACTTTGGATCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: GLHLMCSILNAIQTVLFSCNVSK*TLDLLQ
Trigger: CTGGAGAAGATCCAAAGTGCACTTGCTGACATTGCA...AGAGAAAAGAACTGTTTGAATGGCATTAAGAATGCTGCACATCAGATGTAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032429.9
CDS-3UTR GCA 90 bp GGCTTACATCTGATGTGCAGCATTCTTAATGCCATTCAAACAGTTCTTTTCTCTATTACAAAACTGATCTaGAAGCGAGTTCACAGCGTC +
Preference number: 4 (lower is better)
Translates to: GLHLMCSILNAIQTVLFSITKLI*KRVHSV
Trigger: GACGCTGTGAACTCGCTTGCAGATCAGTTTTGTAAT...AGAGAAAAGAACTGTTTGAATGGCATTAAGAATGCTGCACATCAGATGTAAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032429.9