Pregenerated sensors for MED20 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000092558Ensembl transcript IDs: ENSMUST00000024778.3
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGAAGTCCAAAGCCCCGGAACACAAGCTACAGCTGGGAACCAGCTaGGCCAGGGGCCCAGGACCGAGTCCAGCACGTGGGCCTGGGCAT | + |
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Preference number: 1 (lower is better) Translates to: GKSKAPEHKLQLGTS*ARGPGPSPARGPGH Trigger: ATGCCCAGGCCCACGTGCTGGACTCGGTCCTGGGCCCCTGGCCCAGCTGGTTCCCAGCTGTAGCTTGTGTTCCGGGGCTTTGGACTTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| 3UTR CCA 90 bp | TGGGCTCAGGAGGGAAGTCCAAAGCCCCGGAACACAAGCTACAGCTaGGAACCAGCTGGGCCAGGGGCCCAGGACCGAGTCCAGCACGTG | + |
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Preference number: 1 (lower is better) Translates to: WAQEGSPKPRNTSYS*EPAGPGAQDRVQHV Trigger: CACGTGCTGGACTCGGTCCTGGGCCCCTGGCCCAGCTGGTTCCCAGCTGTAGCTTGTGTTCCGGGGCTTTGGACTTCCCTCCTGAGCCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| 3UTR GCA 90 bp | CAGCCGATAACAAACCCTCAGCACCTGGGACACACACAGCTCCAGTaGCAACAGCGACAACCCTGTCCTACCTTTTGCCCTACAGCTTTT | + |
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Preference number: 1 (lower is better) Translates to: QPITNPQHLGHTQLQ*QQRQPCPTFCPTAF Trigger: AAAAGCTGTAGGGCAAAAGGTAGGACAGGGTTGTCGCTGTTGGCACTGGAGCTGTGTGTGTCCCAGGTGCTGAGGGTTTGTTATCGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| 3UTR TCA 90 bp | ACTAACAACCAAAGCAAGAGGAAGCAACAGGAGCAACCGGATAACTaGGCCACAGCAGGAAGGCGTGATGAGCTGTCCTGCCAGCTAAAG | + |
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Preference number: 1 (lower is better) Translates to: TNNQSKRKQQEQPDN*ATAGRRDELSCQLK Trigger: CTTTAGCTGGCAGGACAGCTCATCACGCCTTCCTGCTGTGGCTCAGTTATCCGGTTGCTCCTGTTGCTTCCTCTTGCTTTGGTTGTTAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| 3UTR TCA 90 bp | CCTCTCAATCTCGCTCTCCTCAGTGGACTGTGGGTGCAGAGCTACTaGGCATCCTGTAGGAAGGAAAGCATTTTGGGACAGTATGATATA | + |
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Preference number: 1 (lower is better) Translates to: PLNLALLSGLWVQSY*ASCRKESILGQYDI Trigger: TATATCATACTGTCCCAAAATGCTTTCCTTCCTACAGGATGCTCAGTAGCTCTGCACCCACAGTCCACTGAGGAGAGCGAGATTGAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| 3UTR TCA 90 bp | AGCAAGATAAGACAACCTAGGAGGCACCCTGAAAAACCTGAGTGTTaGGTGTCAGGAACATGTGTCCACAGTGCTTTGAGCAACTCTGAA | + |
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Preference number: 1 (lower is better) Translates to: SKIRQPRRHPEKPEC*VSGTCVHSALSNSE Trigger: TTCAGAGTTGCTCAAAGCACTGTGGACACATGTTCCTGACACTCAACACTCAGGTTTTTCAGGGTGCCTCCTAGGTTGTCTTATCTTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| 3UTR-3UTR CCA 90 bp | TGGGCTCAGGAGGGAAGTCCAAAGCCCCGGAACACAAGCTACAGCTGGGAACCAACCGAGTCCAGCACGTaGGCCTGGGCATTACCCTGG | + |
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Preference number: 2 (lower is better) Translates to: WAQEGSPKPRNTSYSWEPTESST*AWALPW Trigger: CCAGGGTAATGCCCAGGCCCACGTGCTGGACTCGGT...TGGTTCCCAGCTGTAGCTTGTGTTCCGGGGCTTTGGACTTCCCTCCTGAGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| 3UTR-3UTR TCA 90 bp | GTCCAGCCGATAACAAACCCTCAGCACCTGGGACACACACAGCTCCAGTGCCAAAGTAAAAACCAGCTGTaGTGGGCTCAGGAGGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: VQPITNPQHLGHTQLQCQSKNQL*WAQEGS Trigger: ACTTCCCTCCTGAGCCCATCACAGCTGGTTTTTACT...TTGGCACTGGAGCTGTGTGTGTCCCAGGTGCTGAGGGTTTGTTATCGGCTGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| 3UTR-3UTR GCA 90 bp | CCAACAATCCAGTCCTGCCACCTAACCATCTCCAGGAGAGGCCAGCCGCATCCTCCCTGTCCTACCTTTTaGCCTACAGCTTTTCCATTC | + |
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Preference number: 2 (lower is better) Translates to: PTIQSCHLTISRRGQPHPPCPTF*PTAFPF Trigger: GAATGGAAAAGCTGTAGGGCAAAAGGTAGGACAGGG...AGGATGCGGCTGGCCTCTCCTGGAGATGGTTAGGTGGCAGGACTGGATTGTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| 3UTR-3UTR TCA 90 bp | TGCAGTAAGAGTCCTCTGCTTTTGGTTCTGCTACAGCGGCCTGGCCTACAGGGTCACAGTTACCATTCTTaGGGACCAGCCAAATCCAGT | + |
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Preference number: 2 (lower is better) Translates to: CSKSPLLLVLLQRPGLQGHSYHS*GPAKSS Trigger: ACTGGATTTGGCTGGTCCTCAAGAATGGTAACTGTG...ACCCTGTAGGCCAGGCCGCTGTAGCAGAACCAAAAGCAGAGGACTCTTACTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| 3UTR-3UTR TCA 90 bp | AAAATAAACTGTGCAGTAAGAGTCCTCTGCTTTTGGTTCTGCTACAGCGGCCTGTGGGCATTACCCTGGTaGCAACTCAGCAGGTGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: KINCAVRVLCFWFCYSGLWALPW*QLSRWA Trigger: TGCCCACCTGCTGAGTTGTCACCAGGGTAATGCCCA...CAGGCCGCTGTAGCAGAACCAAAAGCAGAGGACTCTTACTGCACAGTTTATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| 3UTR-3UTR GCA 90 bp | ACATGTGTCCACAGTGCTTTGAGCAACTCTGAAAACCATCCCTCTCAATCTCGCCACACACAGCTCCAGTaGCAACAGCGACAACCCTGT | + |
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Preference number: 2 (lower is better) Translates to: TCVHSALSNSENHPSQSRHTQLQ*QQRQPC Trigger: ACAGGGTTGTCGCTGTTGGCACTGGAGCTGTGTGTG...GCGAGATTGAGAGGGATGGTTTTCAGAGTTGCTCAAAGCACTGTGGACACATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| 3UTR-3UTR CCA 90 bp | ATTAACGTCTGCGTTTTCAGGCAGCCAGTACAAAGCAGAGTAGACAGACTGCAAACTACCCAGATGCGCTaGCAAGTCTGCCTAGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: INVCVFRQPVQSRVDRLQTTQMR*QVCLAV Trigger: CACAGCTAGGCAGACTTGCCAGCGCATCTGGGTAGT...TTGCAGTCTGTCTACTCTGCTTTGTACTGGCTGCCTGAAAACGCAGACGTTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| 3UTR-3UTR TCA 90 bp | ACATGTGTCCACAGTGCTTTGAGCAACTCTGAAAACCATCCCTCTCAATCTCGCTCAGTGTCCAAAGAATaGAAGCGACACTCTAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: TCVHSALSNSENHPSQSRSVSKE*KRHSSS Trigger: GCTGCTAGAGTGTCGCTTTCATTCTTTGGACACTGA...GCGAGATTGAGAGGGATGGTTTTCAGAGTTGCTCAAAGCACTGTGGACACATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| 3UTR-3UTR GCA 90 bp | CCCTCTCAATCTCGCTCTCCTCAGTGGACTGTGGGTGCAGAGCTACTGAGCATCATGAAAAATAAACTGTaGAGTAAGAGTCCTCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: PSQSRSPQWTVGAELLSIMKNKL*SKSPLL Trigger: AAGCAGAGGACTCTTACTGCACAGTTTATTTTTCAT...GATGCTCAGTAGCTCTGCACCCACAGTCCACTGAGGAGAGCGAGATTGAGAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| 3UTR-3UTR TCA 90 bp | ATTAACGTCTGCGTTTTCAGGCAGCCAGTACAAAGCAGAGTAGACAGACTGCAAGGACAGGATCCTAACTaGCAGCCTACACTTTGTAGA | + |
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Preference number: 2 (lower is better) Translates to: INVCVFRQPVQSRVDRLQGQDPN*QPTLCR Trigger: TCTACAAAGTGTAGGCTGTCAGTTAGGATCCTGTCC...TTGCAGTCTGTCTACTCTGCTTTGTACTGGCTGCCTGAAAACGCAGACGTTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| 3UTR CCA 72 bp | AAAGCCCCGGAACACAAGCTACAGCTGGGAACCAGCTaGGCCAGGGGCCCAGGACCGAGTCCAGCACGTGGG | + |
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Preference number: 3 (lower is better) Translates to: KAPEHKLQLGTS*ARGPGPSPARG Trigger: CCCACGTGCTGGACTCGGTCCTGGGCCCCTGGCCCAGCTGGTTCCCAGCTGTAGCTTGTGTTCCGGGGCTTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| 3UTR TCA 72 bp | CAAAGCAAGAGGAAGCAACAGGAGCAACCGGATAACTaGGCCACAGCAGGAAGGCGTGATGAGCTGTCCTGC | + |
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Preference number: 3 (lower is better) Translates to: QSKRKQQEQPDN*ATAGRRDELSC Trigger: GCAGGACAGCTCATCACGCCTTCCTGCTGTGGCTCAGTTATCCGGTTGCTCCTGTTGCTTCCTCTTGCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| 3UTR TCA 72 bp | CTCGCTCTCCTCAGTGGACTGTGGGTGCAGAGCTACTaGGCATCCTGTAGGAAGGAAAGCATTTTGGGACAG | + |
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Preference number: 3 (lower is better) Translates to: LALLSGLWVQSY*ASCRKESILGQ Trigger: CTGTCCCAAAATGCTTTCCTTCCTACAGGATGCTCAGTAGCTCTGCACCCACAGTCCACTGAGGAGAGCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| 3UTR GCA 72 bp | TCCCTCTCAATCTCGCTCTCCTCAGTGGACTGTGGGTaGAGAGCTACTGAGCATCCTGTAGGAAGGAAAGCA | + |
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Preference number: 3 (lower is better) Translates to: SLSISLSSVDCG*RATEHPVGRKA Trigger: TGCTTTCCTTCCTACAGGATGCTCAGTAGCTCTGCACCCACAGTCCACTGAGGAGAGCGAGATTGAGAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| 3UTR TCA 72 bp | GTCAGGAACATGTGTCCACAGTGCTTTGAGCAACTCTaGAAACCATCCCTCTCAATCTCGCTCTCCTCAGTG | + |
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Preference number: 3 (lower is better) Translates to: VRNMCPQCFEQL*KPSLSISLSSV Trigger: CACTGAGGAGAGCGAGATTGAGAGGGATGGTTTTCAGAGTTGCTCAAAGCACTGTGGACACATGTTCCTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| 3UTR TCA 72 bp | AGACAACCTAGGAGGCACCCTGAAAAACCTGAGTGTTaGGTGTCAGGAACATGTGTCCACAGTGCTTTGAGC | + |
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Preference number: 3 (lower is better) Translates to: RQPRRHPEKPEC*VSGTCVHSALS Trigger: GCTCAAAGCACTGTGGACACATGTTCCTGACACTCAACACTCAGGTTTTTCAGGGTGCCTCCTAGGTTGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| 3UTR TCA 72 bp | GGCCTGGCCTACAGGGTCACAGAATTTAAAACAGTATaGGAAGACATCAGTGTCCAAAGAATGAAAGCGACA | + |
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Preference number: 3 (lower is better) Translates to: GLAYRVTEFKTV*EDISVQRMKAT Trigger: TGTCGCTTTCATTCTTTGGACACTGATGTCTTCTCATACTGTTTTAAATTCTGTGACCCTGTAGGCCAGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS-3UTR CCA 90 bp | GCCCCGGAACACAAGCTACAGCTGGGAACCAGCTGGGCCAGGGGCCCAGGACCGTGTTCCCAAATACTGTaGGTGCCCCTGGTGCGTGGC | + |
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Preference number: 4 (lower is better) Translates to: APEHKLQLGTSWARGPGPCSQIL*VPLVRG Trigger: GCCACGCACCAGGGGCACCCACAGTATTTGGGAACA...CGGTCCTGGGCCCCTGGCCCAGCTGGTTCCCAGCTGTAGCTTGTGTTCCGGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS-3UTR GCA 90 bp | CCCTCTCAATCTCGCTCTCCTCAGTGGACTGTGGGTGCAGAGCTACTGAGCATCCCACCTCCACAGAGATaGCACGGGCACTGGGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: PSQSRSPQWTVGAELLSIPPPQR*HGHWAP Trigger: TGGGGCCCAGTGCCCGTGGCATCTCTGTGGAGGTGG...GATGCTCAGTAGCTCTGCACCCACAGTCCACTGAGGAGAGCGAGATTGAGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS-3UTR TCA 90 bp | CCCTCTCAATCTCGCTCTCCTCAGTGGACTGTGGGTGCAGAGCTACTGAGCATCCACTGGGCCCCATTGTaGCCGTGCCCACCTTCACCA | + |
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Preference number: 4 (lower is better) Translates to: PSQSRSPQWTVGAELLSIHWAPL*PCPPSP Trigger: TGGTGAAGGTGGGCACGGTCACAATGGGGCCCAGTG...GATGCTCAGTAGCTCTGCACCCACAGTCCACTGAGGAGAGCGAGATTGAGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS-3UTR GCA 90 bp | GTGATGGGCTCAGGAGGGAAGTCCAAAGCCCCGGAACACAAGCTACAGCTGGGACCCGGGTCTCAATCTTaGTGGCCTTGGCACTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: VMGSGGKSKAPEHKLQLGPGSQS*WPWHSG Trigger: TCCAGAGTGCCAAGGCCAGCAAGATTGAGACCCGGG...TCCCAGCTGTAGCTTGTGTTCCGGGGCTTTGGACTTCCCTCCTGAGCCCATCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS-3UTR CCA 90 bp | TGGGCTCAGGAGGGAAGTCCAAAGCCCCGGAACACAAGCTACAGCTGGGAACCATCAGCCACAGGCATCTaGGACACACACGTCACTCCC | + |
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Preference number: 4 (lower is better) Translates to: WAQEGSPKPRNTSYSWEPSATGI*DTHVTP Trigger: GGGAGTGACGTGTGTGTCCCAGATGCCTGTGGCTGA...TGGTTCCCAGCTGTAGCTTGTGTTCCGGGGCTTTGGACTTCCCTCCTGAGCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS-3UTR CCA 90 bp | GTCCAGCCGATAACAAACCCTCAGCACCTGGGACACACACAGCTCCAGTGCCAAATCAGCTTCCCAGCCTaGCCTTGGCTGCCCAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: VQPITNPQHLGHTQLQCQISFPA*PWLPRV Trigger: TACCCTGGGCAGCCAAGGCCAGGCTGGGAAGCTGAT...TTGGCACTGGAGCTGTGTGTGTCCCAGGTGCTGAGGGTTTGTTATCGGCTGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS-3UTR CCA 90 bp | GTGATGGGCTCAGGAGGGAAGTCCAAAGCCCCGGAACACAAGCTACAGCTGGGAGGTGCCCCTGGTGCGTaGCTCCCTAGAAAACTCTGT | + |
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Preference number: 4 (lower is better) Translates to: VMGSGGKSKAPEHKLQLGGAPGA*LPRKLC Trigger: ACAGAGTTTTCTAGGGAGCCACGCACCAGGGGCACC...TCCCAGCTGTAGCTTGTGTTCCGGGGCTTTGGACTTCCCTCCTGAGCCCATCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS-3UTR TCA 90 bp | AGCTGGGCCAGGGGCCCAGGACCGAGTCCAGCACGTGGGCCTGGGCATTACCCTGTTTTCGGATCTTGTTaGAGAGTTCCATGTACTGTA | + |
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Preference number: 4 (lower is better) Translates to: SWARGPGPSPARGPGHYPVFGSC*RVPCTV Trigger: TACAGTACATGGAACTCTTCAACAAGATCCGAAAAC...AGGGTAATGCCCAGGCCCACGTGCTGGACTCGGTCCTGGGCCCCTGGCCCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS-3UTR TCA 90 bp | GTGATGGGCTCAGGAGGGAAGTCCAAAGCCCCGGAACACAAGCTACAGCTGGGATCTCCAGTTTCTTGGTaGGGAGCTCCACTGTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: VMGSGGKSKAPEHKLQLGSPVSW*GAPLSA Trigger: AGCAGACAGTGGAGCTCCTCACCAAGAAACTGGAGA...TCCCAGCTGTAGCTTGTGTTCCGGGGCTTTGGACTTCCCTCCTGAGCCCATCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS-3UTR GCA 90 bp | GTGATGGGCTCAGGAGGGAAGTCCAAAGCCCCGGAACACAAGCTACAGCTGGGAAATACTGGTAGCGAGTaGCCCGGGTCTCAATCTTGC | + |
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Preference number: 4 (lower is better) Translates to: VMGSGGKSKAPEHKLQLGNTGSE*PGSQSC Trigger: GCAAGATTGAGACCCGGGGCACTCGCTACCAGTATT...TCCCAGCTGTAGCTTGTGTTCCGGGGCTTTGGACTTCCCTCCTGAGCCCATCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS-3UTR CCA 90 bp | TGGGCTCAGGAGGGAAGTCCAAAGCCCCGGAACACAAGCTACAGCTGGGAACCAGGGTCTCAATCTTGCTaGCCTTGGCACTCTGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: WAQEGSPKPRNTSYSWEPGSQSC*PWHSGR Trigger: TCTTCCAGAGTGCCAAGGCCAGCAAGATTGAGACCC...TGGTTCCCAGCTGTAGCTTGTGTTCCGGGGCTTTGGACTTCCCTCCTGAGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS-3UTR CCA 90 bp | CCCTCTCAATCTCGCTCTCCTCAGTGGACTGTGGGTGCAGAGCTACTGAGCATCCAATCTTGCTGGCCTTaGCACTCTGGAAGAAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: PSQSRSPQWTVGAELLSIQSCWP*HSGRSP Trigger: AGGGCTTCTTCCAGAGTGCCAAGGCCAGCAAGATTG...GATGCTCAGTAGCTCTGCACCCACAGTCCACTGAGGAGAGCGAGATTGAGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS-3UTR CCA 90 bp | TGCAGTAAGAGTCCTCTGCTTTTGGTTCTGCTACAGCGGCCTGGCCTACAGGGTACGGATCCCAGCCACTaGCACTTGCTGCTGTTTTCG | + |
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Preference number: 4 (lower is better) Translates to: CSKSPLLLVLLQRPGLQGTDPSH*HLLLFS Trigger: CGAAAACAGCAGCAAGTGCCAGTGGCTGGGATCCGT...ACCCTGTAGGCCAGGCCGCTGTAGCAGAACCAAAAGCAGAGGACTCTTACTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS-3UTR TCA 90 bp | CCCTCTCAATCTCGCTCTCCTCAGTGGACTGTGGGTGCAGAGCTACTGAGCATCAGTTGGTGTCAGCAATaGGGCAAGGGCCATTCTCAA | + |
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Preference number: 4 (lower is better) Translates to: PSQSRSPQWTVGAELLSISWCQQ*GKGHSQ Trigger: TTGAGAATGGCCCTTGCCTCATTGCTGACACCAACT...GATGCTCAGTAGCTCTGCACCCACAGTCCACTGAGGAGAGCGAGATTGAGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS-3UTR GCA 90 bp | CCAACAATCCAGTCCTGCCACCTAACCATCTCCAGGAGAGGCCAGCCGCATCCTGGGTACTCAGAGTTATaGATCACGTACATCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: PTIQSCHLTISRRGQPHPGYSEL*ITYISF Trigger: GAAGCTGATGTACGTGATGCATAACTCTGAGTACCC...AGGATGCGGCTGGCCTCTCCTGGAGATGGTTAGGTGGCAGGACTGGATTGTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS-3UTR GCA 90 bp | CCCTCTCAATCTCGCTCTCCTCAGTGGACTGTGGGTGCAGAGCTACTGAGCATCTGTCCCTTGTTTCTCTaGTCCAAGCATCTCCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: PSQSRSPQWTVGAELLSICPLFL*SKHLQF Trigger: AAACTGGAGATGCTTGGAGCAGAGAAACAAGGGACA...GATGCTCAGTAGCTCTGCACCCACAGTCCACTGAGGAGAGCGAGATTGAGAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS-3UTR CCA 90 bp | TGCAGTAAGAGTCCTCTGCTTTTGGTTCTGCTACAGCGGCCTGGCCTACAGGGTCCATGTACTGTATCATaGTATCTGCTGGCCCATAGA | + |
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Preference number: 4 (lower is better) Translates to: CSKSPLLLVLLQRPGLQGPCTVS*YLLAHR Trigger: TCTATGGGCCAGCAGATACCATGATACAGTACATGG...ACCCTGTAGGCCAGGCCGCTGTAGCAGAACCAAAAGCAGAGGACTCTTACTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS-3UTR GCA 90 bp | AAAATAAACTGTGCAGTAAGAGTCCTCTGCTTTTGGTTCTGCTACAGCGGCCTGAGGAGCTCCACTGTCTaGTGGAGACTCTTGCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: KINCAVRVLCFWFCYSGLRSSTV*WRLLPS Trigger: TGAGGGCAAGAGTCTCCAGCAGACAGTGGAGCTCCT...CAGGCCGCTGTAGCAGAACCAAAAGCAGAGGACTCTTACTGCACAGTTTATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS-3UTR CCA 90 bp | AAAATAAACTGTGCAGTAAGAGTCCTCTGCTTTTGGTTCTGCTACAGCGGCCTGCTGGCCTTGGCACTCTaGAAGAAGCCCTTGAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: KINCAVRVLCFWFCYSGLLALAL*KKPLSF Trigger: GAAGCTCAAGGGCTTCTTCCAGAGTGCCAAGGCCAG...CAGGCCGCTGTAGCAGAACCAAAAGCAGAGGACTCTTACTGCACAGTTTATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS-3UTR GCA 90 bp | ACATGTGTCCACAGTGCTTTGAGCAACTCTGAAAACCATCCCTCTCAATCTCGCGCCACTGGCACTTGCTaGTGTTTTCGGATCTTGTTG | + |
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Preference number: 4 (lower is better) Translates to: TCVHSALSNSENHPSQSRATGTC*CFRILL Trigger: CAACAAGATCCGAAAACAGCAGCAAGTGCCAGTGGC...GCGAGATTGAGAGGGATGGTTTTCAGAGTTGCTCAAAGCACTGTGGACACATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| 3UTR CAA 72 bp | ATGAAAAATAAACTGTGCAGTAAGAGTCCTCTGCTTTaGGTTCTGCTACAGCGGCCTGGCCTACAGGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: MKNKLCSKSPLL*VLLQRPGLQGH Trigger: GTGACCCTGTAGGCCAGGCCGCTGTAGCAGAACCAAAAGCAGAGGACTCTTACTGCACAGTTTATTTTTCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| 3UTR CAA 72 bp | GGAAGCCAAGTTCCTGGTAACGCTGTGGAGTTCATGTaGCCCTGGGAACTGAATGCCTGTGAACTATTAATG | + |
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Preference number: 4 (lower is better) Translates to: GSQVPGNAVEFM*PWELNACELLM Trigger: CATTAATAGTTCACAGGCATTCAGTTCCCAGGGCAACATGAACTCCACAGCGTTACCAGGAACTTGGCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS-3UTR CCA 90 bp | ACATGTGTCCACAGTGCTTTGAGCAACTCTGAAAACCATCCCTCTCAATCTCGCGGCAAAGCAGCTCAGTaGGTACTCAGAGTTATGCAT | + |
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Preference number: 4 (lower is better) Translates to: TCVHSALSNSENHPSQSRGKAAQ*VLRVMH Trigger: ATGCATAACTCTGAGTACCCACTGAGCTGCTTTGCC...GCGAGATTGAGAGGGATGGTTTTCAGAGTTGCTCAAAGCACTGTGGACACATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS-3UTR CCA 90 bp | ATTAACGTCTGCGTTTTCAGGCAGCCAGTACAAAGCAGAGTAGACAGACTGCAATATCATGGTATCTGCTaGCCCATAGACCGCATCGTG | + |
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Preference number: 4 (lower is better) Translates to: INVCVFRQPVQSRVDRLQYHGIC*PIDRIV Trigger: CACGATGCGGTCTATGGGCCAGCAGATACCATGATA...TTGCAGTCTGTCTACTCTGCTTTGTACTGGCTGCCTGAAAACGCAGACGTTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| 3UTR CAA 72 bp | GCCCTACAGCTTTTCCATTCTCCACAGTTACCATTCTaGAGGACCAGCCAAATCCAGTTAAAGCATGAAGTA | + |
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Preference number: 4 (lower is better) Translates to: ALQLFHSPQLPF*RTSQIQLKHEV Trigger: TACTTCATGCTTTAACTGGATTTGGCTGGTCCTCAAGAATGGTAACTGTGGAGAATGGAAAAGCTGTAGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS-3UTR CAA 90 bp | AGCTGGGCCAGGGGCCCAGGACCGAGTCCAGCACGTGGGCCTGGGCATTACCCTCCCCGGGTCTCAATCTaGCTGGCCTTGGCACTCTGG | + |
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Preference number: 5 (lower is better) Translates to: SWARGPGPSPARGPGHYPPRVSI*LALALW Trigger: CCAGAGTGCCAAGGCCAGCAAGATTGAGACCCGGGG...AGGGTAATGCCCAGGCCCACGTGCTGGACTCGGTCCTGGGCCCCTGGCCCAGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS-3UTR CAA 90 bp | GCCCCGGAACACAAGCTACAGCTGGGAACCAGCTGGGCCAGGGGCCCAGGACCGGTCTGCTGGAGACTCTaGCCCTCAGCCACAGGCATC | + |
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Preference number: 5 (lower is better) Translates to: APEHKLQLGTSWARGPGPVCWRL*PSATGI Trigger: GATGCCTGTGGCTGAGGGCAAGAGTCTCCAGCAGAC...CGGTCCTGGGCCCCTGGCCCAGCTGGTTCCCAGCTGTAGCTTGTGTTCCGGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS-3UTR CAA 90 bp | TGCAGTAAGAGTCCTCTGCTTTTGGTTCTGCTACAGCGGCCTGGCCTACAGGGTCTTCCCAGCCTGGCCTaGGCTGCCCAGGGTAGAGGC | + |
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Preference number: 5 (lower is better) Translates to: CSKSPLLLVLLQRPGLQGLPSLA*AAQGRG Trigger: GCCTCTACCCTGGGCAGCCAAGGCCAGGCTGGGAAG...ACCCTGTAGGCCAGGCCGCTGTAGCAGAACCAAAAGCAGAGGACTCTTACTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS TCA 90 bp | CATACTCCACCTCCACAGAGATGCCACGGGCACTGGGCCCCATTGTaGCCGTGCCCACCTTCACCAGGAAGTCACAATACTGGTAGCGAG | + |
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Preference number: 5 (lower is better) Translates to: HTPPPQRCHGHWAPL*PCPPSPGSHNTGSE Trigger: CTCGCTACCAGTATTGTGACTTCCTGGTGAAGGTGGGCACGGTCACAATGGGGCCCAGTGCCCGTGGCATCTCTGTGGAGGTGGAGTATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS-3UTR CAA 90 bp | GCCCCGGAACACAAGCTACAGCTGGGAACCAGCTGGGCCAGGGGCCCAGGACCGTGCTGTTTTCGGATCTaGTTGAAGAGTTCCATGTAC | + |
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Preference number: 5 (lower is better) Translates to: APEHKLQLGTSWARGPGPCCFRI*LKSSMY Trigger: GTACATGGAACTCTTCAACAAGATCCGAAAACAGCA...CGGTCCTGGGCCCCTGGCCCAGCTGGTTCCCAGCTGTAGCTTGTGTTCCGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS-3UTR CAA 90 bp | CCAACAATCCAGTCCTGCCACCTAACCATCTCCAGGAGAGGCCAGCCGCATCCTTCAATCTTGCTGGCCTaGGCACTCTGGAAGAAGCCC | + |
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Preference number: 5 (lower is better) Translates to: PTIQSCHLTISRRGQPHPSILLA*ALWKKP Trigger: GGGCTTCTTCCAGAGTGCCAAGGCCAGCAAGATTGA...AGGATGCGGCTGGCCTCTCCTGGAGATGGTTAGGTGGCAGGACTGGATTGTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS GCA 90 bp | TCTGCTCCAAGCATCTCCAGTTTCTTGGTGAGGAGCTCCACTGTCTaGTGGAGACTCTTGCCCTCAGCCACAGGCATCTGGGACACACAC | + |
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Preference number: 5 (lower is better) Translates to: SAPSISSFLVRSSTV*WRLLPSATGIWDTH Trigger: GTGTGTGTCCCAGATGCCTGTGGCTGAGGGCAAGAGTCTCCAGCAGACAGTGGAGCTCCTCACCAAGAAACTGGAGATGCTTGGAGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS CCA 90 bp | ACCGCATCGTGTCTGTTCCCAAATACTGTGGGTGCCCCTGGTGCGTaGCTCCCTAGAAAACTCTGTAGGAACTCAAGCAGGAGGCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: TASCLFPNTVGAPGA*LPRKLCRNSSRRLQ Trigger: CTGGAGCCTCCTGCTTGAGTTCCTACAGAGTTTTCTAGGGAGCCACGCACCAGGGGCACCCACAGTATTTGGGAACAGACACGATGCGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS CCA 90 bp | TATCTGCTGGCCCATAGACCGCATCGTGTCTGTTCCCAAATACTGTaGGTGCCCCTGGTGCGTGGCTCCCTAGAAAACTCTGTAGGAACT | + |
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Preference number: 5 (lower is better) Translates to: YLLAHRPHRVCSQIL*VPLVRGSLENSVGT Trigger: AGTTCCTACAGAGTTTTCTAGGGAGCCACGCACCAGGGGCACCCACAGTATTTGGGAACAGACACGATGCGGTCTATGGGCCAGCAGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS-3UTR CAA 90 bp | GTCCAGCCGATAACAAACCCTCAGCACCTGGGACACACACAGCTCCAGTGCCAACACACAAAATGTCCCTaGTTTCTCTGCTCCAAGCAT | + |
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Preference number: 5 (lower is better) Translates to: VQPITNPQHLGHTQLQCQHTKCP*FLCSKH Trigger: ATGCTTGGAGCAGAGAAACAAGGGACATTTTGTGTG...TTGGCACTGGAGCTGTGTGTGTCCCAGGTGCTGAGGGTTTGTTATCGGCTGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS TCA 90 bp | AACGGATCCCAGCCACTGGCACTTGCTGCTGTTTTCGGATCTTGTTaGAGAGTTCCATGTACTGTATCATGGTATCTGCTGGCCCATAGA | + |
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Preference number: 5 (lower is better) Translates to: NGSQPLALAAVFGSC*RVPCTVSWYLLAHR Trigger: TCTATGGGCCAGCAGATACCATGATACAGTACATGGAACTCTTCAACAAGATCCGAAAACAGCAGCAAGTGCCAGTGGCTGGGATCCGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS GCA 90 bp | TGTGTGGTAAGTCTCACAGTCCACACAAAATGTCCCTTGTTTCTCTaGTCCAAGCATCTCCAGTTTCTTGGTGAGGAGCTCCACTGTCTG | + |
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Preference number: 5 (lower is better) Translates to: CVVSLTVHTKCPLFL*SKHLQFLGEELHCL Trigger: CAGACAGTGGAGCTCCTCACCAAGAAACTGGAGATGCTTGGAGCAGAGAAACAAGGGACATTTTGTGTGGACTGTGAGACTTACCACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS CCA 90 bp | TCGGATCTTGTTGAAGAGTTCCATGTACTGTATCATGGTATCTGCTaGCCCATAGACCGCATCGTGTCTGTTCCCAAATACTGTGGGTGC | + |
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Preference number: 5 (lower is better) Translates to: SDLVEEFHVLYHGIC*PIDRIVSVPKYCGC Trigger: GCACCCACAGTATTTGGGAACAGACACGATGCGGTCTATGGGCCAGCAGATACCATGATACAGTACATGGAACTCTTCAACAAGATCCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS-3UTR CAA 90 bp | TGCAGTAAGAGTCCTCTGCTTTTGGTTCTGCTACAGCGGCCTGGCCTACAGGGTTGTTTTCGGATCTTGTaGAAGAGTTCCATGTACTGT | + |
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Preference number: 5 (lower is better) Translates to: CSKSPLLLVLLQRPGLQGCFRIL*KSSMYC Trigger: ACAGTACATGGAACTCTTCAACAAGATCCGAAAACA...ACCCTGTAGGCCAGGCCGCTGTAGCAGAACCAAAAGCAGAGGACTCTTACTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS-3UTR CAA 90 bp | AAAATAAACTGTGCAGTAAGAGTCCTCTGCTTTTGGTTCTGCTACAGCGGCCTGCTCTGGAAGAAGCCCTaGAGCTTCACCATAAGCACA | + |
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Preference number: 5 (lower is better) Translates to: KINCAVRVLCFWFCYSGLLWKKP*SFTIST Trigger: TGTGCTTATGGTGAAGCTCAAGGGCTTCTTCCAGAG...CAGGCCGCTGTAGCAGAACCAAAAGCAGAGGACTCTTACTGCACAGTTTATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS GCA 90 bp | TTTTCGGATCTTGTTGAAGAGTTCCATGTACTGTATCATGGTATCTaGTGGCCCATAGACCGCATCGTGTCTGTTCCCAAATACTGTGGG | + |
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Preference number: 5 (lower is better) Translates to: FSDLVEEFHVLYHGI*WPIDRIVSVPKYCG Trigger: CCCACAGTATTTGGGAACAGACACGATGCGGTCTATGGGCCAGCAGATACCATGATACAGTACATGGAACTCTTCAACAAGATCCGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS TCA 72 bp | CCTCCACAGAGATGCCACGGGCACTGGGCCCCATTGTaGCCGTGCCCACCTTCACCAGGAAGTCACAATACT | + |
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Preference number: 6 (lower is better) Translates to: PPQRCHGHWAPL*PCPPSPGSHNT Trigger: AGTATTGTGACTTCCTGGTGAAGGTGGGCACGGTCACAATGGGGCCCAGTGCCCGTGGCATCTCTGTGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS GCA 72 bp | CCACCTTCACCAGGAAGTCACAATACTGGTAGCGAGTaGCCCGGGTCTCAATCTTGCTGGCCTTGGCACTCT | + |
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Preference number: 6 (lower is better) Translates to: PPSPGSHNTGSE*PGSQSCWPWHS Trigger: AGAGTGCCAAGGCCAGCAAGATTGAGACCCGGGGCACTCGCTACCAGTATTGTGACTTCCTGGTGAAGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS CCA 72 bp | GCCCATAGACCGCATCGTGTCTGTTCCCAAATACTGTaGGTGCCCCTGGTGCGTGGCTCCCTAGAAAACTCT | + |
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Preference number: 6 (lower is better) Translates to: AHRPHRVCSQIL*VPLVRGSLENS Trigger: AGAGTTTTCTAGGGAGCCACGCACCAGGGGCACCCACAGTATTTGGGAACAGACACGATGCGGTCTATGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS GCA 72 bp | AAGAGGGCAAAGCAGCTCAGTGGGTACTCAGAGTTATaGATCACGTACATCAGCTTCCCAGCCTGGCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: KRAKQLSGYSEL*ITYISFPAWPW Trigger: CCAAGGCCAGGCTGGGAAGCTGATGTACGTGATGCATAACTCTGAGTACCCACTGAGCTGCTTTGCCCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS CCA 72 bp | TGTCTGTTCCCAAATACTGTGGGTGCCCCTGGTGCGTaGCTCCCTAGAAAACTCTGTAGGAACTCAAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: CLFPNTVGAPGA*LPRKLCRNSSR Trigger: CCTGCTTGAGTTCCTACAGAGTTTTCTAGGGAGCCACGCACCAGGGGCACCCACAGTATTTGGGAACAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS TCA 72 bp | CTTGTTTCTCTGCTCCAAGCATCTCCAGTTTCTTGGTaGGGAGCTCCACTGTCTGCTGGAGACTCTTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: LVSLLQASPVSW*GAPLSAGDSCP Trigger: AGGGCAAGAGTCTCCAGCAGACAGTGGAGCTCCTCACCAAGAAACTGGAGATGCTTGGAGCAGAGAAACAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS CAA 90 bp | AGAGGCAGCTGTGTGGTAAGTCTCACAGTCCACACAAAATGTCCCTaGTTTCTCTGCTCCAAGCATCTCCAGTTTCTTGGTGAGGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: RGSCVVSLTVHTKCP*FLCSKHLQFLGEEL Trigger: GAGCTCCTCACCAAGAAACTGGAGATGCTTGGAGCAGAGAAACAAGGGACATTTTGTGTGGACTGTGAGACTTACCACACAGCTGCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS TCA 72 bp | CAGCCACTGGCACTTGCTGCTGTTTTCGGATCTTGTTaGAGAGTTCCATGTACTGTATCATGGTATCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: QPLALAAVFGSC*RVPCTVSWYLL Trigger: CAGCAGATACCATGATACAGTACATGGAACTCTTCAACAAGATCCGAAAACAGCAGCAAGTGCCAGTGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS CCA 72 bp | GTTGAAGAGTTCCATGTACTGTATCATGGTATCTGCTaGCCCATAGACCGCATCGTGTCTGTTCCCAAATAC | + |
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Preference number: 6 (lower is better) Translates to: VEEFHVLYHGIC*PIDRIVSVPKY Trigger: GTATTTGGGAACAGACACGATGCGGTCTATGGGCCAGCAGATACCATGATACAGTACATGGAACTCTTCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS CAA 72 bp | CCAGCCACTGGCACTTGCTGCTGTTTTCGGATCTTGTaGAAGAGTTCCATGTACTGTATCATGGTATCTGCT | + |
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Preference number: 6 (lower is better) Translates to: PATGTCCCFRIL*KSSMYCIMVSA Trigger: AGCAGATACCATGATACAGTACATGGAACTCTTCAACAAGATCCGAAAACAGCAGCAAGTGCCAGTGGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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| CDS CAA 72 bp | ATCCCAGCCACTGGCACTTGCTGCTGTTTTCGGATCTaGTTGAAGAGTTCCATGTACTGTATCATGGTATCT | + |
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Preference number: 6 (lower is better) Translates to: IPATGTCCCFRI*LKSSMYCIMVS Trigger: AGATACCATGATACAGTACATGGAACTCTTCAACAAGATCCGAAAACAGCAGCAAGTGCCAGTGGCTGGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024778.3 |
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