Pregenerated sensors for MED19 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027080Ensembl transcript IDs: ENSMUST00000102645.4
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCCTTTTGAAAGTAAAAACAGCTAAGCATGGTGGTGTATGCCTTTaGTCCCAGAACTTGGTGGGTAGAGGCAGATGGGTCTCTCAAGCT | + |
|
Preference number: 1 (lower is better) Translates to: FLLKVKTAKHGGVCL*SQNLVGRGRWVSQA Trigger: AGCTTGAGAGACCCATCTGCCTCTACCCACCAAGTTCTGGGATCAAAGGCATACACCACCATGCTTAGCTGTTTTTACTTTCAAAAGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| 3UTR TCA 90 bp | GTATATAAACACAGGTATAAACCTTATTTGGGCCAGCTTTCCAGGTaGAAGGTGAAGATCATCCATGCACTCTGCTCTGAGCATAATCAG | + |
|
Preference number: 1 (lower is better) Translates to: VYKHRYKPYLGQLSR*KVKIIHALCSEHNQ Trigger: CTGATTATGCTCAGAGCAGAGTGCATGGATGATCTTCACCTTTCACCTGGAAAGCTGGCCCAAATAAGGTTTATACCTGTGTTTATATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| 3UTR-3UTR GCA 90 bp | CAAGCTTGGGGCCAGCCTAGTGTTCATAGCCAGCCAAGGTTGCATAGTGTGATGAGTGTATTAGTCACATaGACAGCAGGGGCTGGCCCC | + |
|
Preference number: 2 (lower is better) Translates to: QAWGQPSVHSQPRLHSVMSVLVT*TAGAGP Trigger: GGGGCCAGCCCCTGCTGTGCATGTGACTAATACACT...CATCACACTATGCAACCTTGGCTGGCTATGAACACTAGGCTGGCCCCAAGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| 3UTR-3UTR GCA 90 bp | CAAGCTTGGGGCCAGCCTAGTGTTCATAGCCAGCCAAGGTTGCATAGTGTGATGATCATCCATGCACTCTaGTCTGAGCATAATCAGCGA | + |
|
Preference number: 2 (lower is better) Translates to: QAWGQPSVHSQPRLHSVMIIHAL*SEHNQR Trigger: TCGCTGATTATGCTCAGAGCAGAGTGCATGGATGAT...CATCACACTATGCAACCTTGGCTGGCTATGAACACTAGGCTGGCCCCAAGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| 3UTR-3UTR TCA 90 bp | CAAGCTTGGGGCCAGCCTAGTGTTCATAGCCAGCCAAGGTTGCATAGTGTGATGTCTCTATTCGCATTTTaGTTTTCCAGTTCCAGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: QAWGQPSVHSQPRLHSVMSLFAF*FSSSSL Trigger: CAGGCTGGAACTGGAAAATCAAAATGCGAATAGAGA...CATCACACTATGCAACCTTGGCTGGCTATGAACACTAGGCTGGCCCCAAGCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| 3UTR-3UTR CCA 90 bp | CAAGCTTGGGGCCAGCCTAGTGTTCATAGCCAGCCAAGGTTGCATAGTGTGATGCTCACCAGTTCCCTGTaGTATATAAACACAGGTATA | + |
|
Preference number: 2 (lower is better) Translates to: QAWGQPSVHSQPRLHSVMLTSSL*YINTGI Trigger: TATACCTGTGTTTATATACCACAGGGAACTGGTGAG...CATCACACTATGCAACCTTGGCTGGCTATGAACACTAGGCTGGCCCCAAGCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| 3UTR-3UTR CCA 90 bp | TGGCTCACCAGTTCCCTGTGGTATATAAACACAGGTATAAACCTTATTTGGGCCCAGGAAAGCCATCCTTaGCCAAGTCCAGTAGTCCTA | + |
|
Preference number: 2 (lower is better) Translates to: WLTSSLWYINTGINLIWAQESHP*PSPVVL Trigger: TAGGACTACTGGACTTGGCCAAGGATGGCTTTCCTG...GGCCCAAATAAGGTTTATACCTGTGTTTATATACCACAGGGAACTGGTGAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| 3UTR-3UTR CCA 90 bp | CAAGCTTGGGGCCAGCCTAGTGTTCATAGCCAGCCAAGGTTGCATAGTGTGATGTTGATTCAAATAGAATaGCACTTGCCTCTTAAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: QAWGQPSVHSQPRLHSVMLIQIE*HLPLKR Trigger: CCTTTTAAGAGGCAAGTGCCATTCTATTTGAATCAA...CATCACACTATGCAACCTTGGCTGGCTATGAACACTAGGCTGGCCCCAAGCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| 3UTR-3UTR GCA 90 bp | TTGATTCAAATAGAATGGCACTTGCCTCTTAAAAGGCAGCCATACCGGTCAGTTACAACAGGGTCCAACTaGCTGGAAGACAAGTTTTTA | + |
|
Preference number: 2 (lower is better) Translates to: LIQIEWHLPLKRQPYRSVTTGSN*LEDKFL Trigger: TAAAAACTTGTCTTCCAGGCAGTTGGACCCTGTTGT...AACTGACCGGTATGGCTGCCTTTTAAGAGGCAAGTGCCATTCTATTTGAATCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| 3UTR CCA 72 bp | AACTTGGTGGGTAGAGGCAGATGGGTCTCTCAAGCTTaGGGCCAGCCTAGTGTTCATAGCCAGCCAAGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: NLVGRGRWVSQA*GQPSVHSQPRL Trigger: CAACCTTGGCTGGCTATGAACACTAGGCTGGCCCCAAGCTTGAGAGACCCATCTGCCTCTACCCACCAAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| 3UTR CCA 72 bp | AGCTGTTGGATGCCCCCACAACAGGGTCCAACTGCCTaGAAGACAAGTTTTTATCAGCAGGTTCAGTATCAC | + |
|
Preference number: 3 (lower is better) Translates to: SCWMPPQQGPTA*KTSFYQQVQYH Trigger: GTGATACTGAACCTGCTGATAAAAACTTGTCTTCCAGGCAGTTGGACCCTGTTGTGGGGGCATCCAACAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| 3UTR TCA 72 bp | ATAAACCTTATTTGGGCCAGCTTTCCAGGTGAAAGGTaGAGATCATCCATGCACTCTGCTCTGAGCATAATC | + |
|
Preference number: 3 (lower is better) Translates to: INLIWASFPGER*RSSMHSALSII Trigger: GATTATGCTCAGAGCAGAGTGCATGGATGATCTTCACCTTTCACCTGGAAAGCTGGCCCAAATAAGGTTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS-3UTR CCA 90 bp | GGCCCCTCTCCAGCTGTTGGATGCCCCCACAACAGGGTCCAACTGCCTGGAAGAGGCTGCTGCTGCTGCTaGCTTGAGAGCTGCCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: GPSPAVGCPHNRVQLPGRGCCCC*LESCPY Trigger: GTATGGGCAGCTCTCAAGCCAGCAGCAGCAGCAGCC...TCTTCCAGGCAGTTGGACCCTGTTGTGGGGGCATCCAACAGCTGGAGAGGGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS-3UTR CCA 90 bp | GGCCCCTCTCCAGCTGTTGGATGCCCCCACAACAGGGTCCAACTGCCTGGAAGACTGCCCATACCTGGGTaGTCTGGACTATGTCGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GPSPAVGCPHNRVQLPGRLPIPG*SGLCRF Trigger: GAACCGACATAGTCCAGACCACCCAGGTATGGGCAG...TCTTCCAGGCAGTTGGACCCTGTTGTGGGGGCATCCAACAGCTGGAGAGGGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS-3UTR CCA 90 bp | GGCCCCTCTCCAGCTGTTGGATGCCCCCACAACAGGGTCCAACTGCCTGGAAGAGAGATCAATCATCCCTaGCAGGTCAGGCAGGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GPSPAVGCPHNRVQLPGREINHP*QVRQEV Trigger: AACTTCCTGCCTGACCTGCCAGGGATGATTGATCTC...TCTTCCAGGCAGTTGGACCCTGTTGTGGGGGCATCCAACAGCTGGAGAGGGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS-3UTR CCA 90 bp | TTGATTCAAATAGAATGGCACTTGCCTCTTAAAAGGCAGCCATACCGGTCAGTTAGGGGGTGGCGGGGGTaGCTTTCCAGGCCCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LIQIEWHLPLKRQPYRSVRGWRG*LSRPKA Trigger: GGCTTTGGGCCTGGAAAGCCACCCCCGCCACCCCCT...AACTGACCGGTATGGCTGCCTTTTAAGAGGCAAGTGCCATTCTATTTGAATCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS-3UTR GCA 90 bp | GGCCCCTCTCCAGCTGTTGGATGCCCCCACAACAGGGTCCAACTGCCTGGAAGACTCTGTTTGTGCTTATaGTTATTCTTCTTCTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GPSPAVGCPHNRVQLPGRLCLCL*LFFFLG Trigger: ACCCAAGAAGAAGAATAAGCATAAGCACAAACAGAG...TCTTCCAGGCAGTTGGACCCTGTTGTGGGGGCATCCAACAGCTGGAGAGGGGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS-3UTR GCA 90 bp | ACTAATTGGCTTTTCCTGCTAAAATATATCCGTGATTGTGGCTCACCAGTTCCCGGAGGCTGCTGCTGCTaGTGGCTTGAGAGCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TNWLFLLKYIRDCGSPVPGGCCC*WLESCP Trigger: TGGGCAGCTCTCAAGCCAGCAGCAGCAGCAGCCTCC...GGGAACTGGTGAGCCACAATCACGGATATATTTTAGCAGGAAAAGCCAATTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS-3UTR CCA 90 bp | AAGACAAGTTTTTATCAGCAGGTTCAGTATCACAGGAAAGCCATCCTTGGCCAAGGCAACGGGCCAGTGTaGAGGCGGAAACCAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: KTSFYQQVQYHRKAILGQGNGPV*RRKPDS Trigger: GCTGTCTGGTTTCCGCCTCCACACTGGCCCGTTGCC...TTGGCCAAGGATGGCTTTCCTGTGATACTGAACCTGCTGATAAAAACTTGTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS-3UTR GCA 90 bp | TGGCTCACCAGTTCCCTGTGGTATATAAACACAGGTATAAACCTTATTTGGGCCTGCATCAGACGACACTaGTCTGGCAACGGGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: WLTSSLWYINTGINLIWACIRRH*SGNGPV Trigger: CACTGGCCCGTTGCCAGAGCAGTGTCGTCTGATGCA...GGCCCAAATAAGGTTTATACCTGTGTTTATATACCACAGGGAACTGGTGAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS-3UTR CCA 90 bp | AAGACAAGTTTTTATCAGCAGGTTCAGTATCACAGGAAAGCCATCCTTGGCCAAGGGGGAACAGGATCCTaGGTGCGGCTCTGTTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KTSFYQQVQYHRKAILGQGGTGS*VRLCLC Trigger: GCACAAACAGAGCCGCACCCAGGATCCTGTTCCCCC...TTGGCCAAGGATGGCTTTCCTGTGATACTGAACCTGCTGATAAAAACTTGTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS-3UTR GCA 90 bp | TTGATTCAAATAGAATGGCACTTGCCTCTTAAAAGGCAGCCATACCGGTCAGTTTGCTGGCTTGAGAGCTaGCCATACCTGGGTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LIQIEWHLPLKRQPYRSVCWLES*PYLGGL Trigger: CAGACCACCCAGGTATGGGCAGCTCTCAAGCCAGCA...AACTGACCGGTATGGCTGCCTTTTAAGAGGCAAGTGCCATTCTATTTGAATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS-3UTR CCA 90 bp | GCCTGGAAGACAAGTTTTTATCAGCAGGTTCAGTATCACAGGAAAGCCATCCTTAGAGCTGCCCATACCTaGGTGGTCTGGACTATGTCG | + |
|
Preference number: 4 (lower is better) Translates to: AWKTSFYQQVQYHRKAILRAAHT*VVWTMS Trigger: CGACATAGTCCAGACCACCCAGGTATGGGCAGCTCT...AAGGATGGCTTTCCTGTGATACTGAACCTGCTGATAAAAACTTGTCTTCCAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS-3UTR TCA 90 bp | AGACAAGTTTTTATCAGCAGGTTCAGTATCACAGGAAAGCCATCCTTGGCCAAGAGGCTGCTGTTGTCATaGGAGCCAGGGAGATCAATC | + |
|
Preference number: 4 (lower is better) Translates to: RQVFISRFSITGKPSLAKRLLLS*EPGRSI Trigger: GATTGATCTCCCTGGCTCTCATGACAACAGCAGCCT...CTTGGCCAAGGATGGCTTTCCTGTGATACTGAACCTGCTGATAAAAACTTGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS-3UTR GCA 90 bp | TGGCTCACCAGTTCCCTGTGGTATATAAACACAGGTATAAACCTTATTTGGGCCGAACAGGATCCTGGGTaGGGCTCTGTTTGTGCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: WLTSSLWYINTGINLIWAEQDPG*GSVCAY Trigger: ATAAGCACAAACAGAGCCGCACCCAGGATCCTGTTC...GGCCCAAATAAGGTTTATACCTGTGTTTATATACCACAGGGAACTGGTGAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS-3UTR CCA 90 bp | AACAGGGTCCAACTGCCTGGAAGACAAGTTTTTATCAGCAGGTTCAGTATCACAATCAGATGGTGTTTCTaGGGGAACAGGATCCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NRVQLPGRQVFISRFSITIRWCF*GNRILG Trigger: ACCCAGGATCCTGTTCCCCCAGAAACACCATCTGAT...TGTGATACTGAACCTGCTGATAAAAACTTGTCTTCCAGGCAGTTGGACCCTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS-3UTR TCA 90 bp | AGACAAGTTTTTATCAGCAGGTTCAGTATCACAGGAAAGCCATCCTTGGCCAAGTTCTTCTTGGGTGGCTaGATATGCATCAGACGACAC | + |
|
Preference number: 4 (lower is better) Translates to: RQVFISRFSITGKPSLAKFFLGG*ICIRRH Trigger: GTGTCGTCTGATGCATATTCAGCCACCCAAGAAGAA...CTTGGCCAAGGATGGCTTTCCTGTGATACTGAACCTGCTGATAAAAACTTGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS-3UTR CCA 90 bp | TGCCTGGAAGACAAGTTTTTATCAGCAGGTTCAGTATCACAGGAAAGCCATCCTCATACCTGGGTGGTCTaGACTATGTCGGTTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CLEDKFLSAGSVSQESHPHTWVV*TMSVLL Trigger: AAGAAGAACCGACATAGTCCAGACCACCCAGGTATG...AGGATGGCTTTCCTGTGATACTGAACCTGCTGATAAAAACTTGTCTTCCAGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS-3UTR TCA 90 bp | AGTGTTCATAGCCAGCCAAGGTTGCATAGTGTGATGTGTCAAAAACAACAACAACCAGGTTGTAGTGTGTaGTTAAATTGGTGCTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SVHSQPRLHSVMCQKQQQPGCSV*LNWCCP Trigger: CGGGCAGCACCAATTTAATCACACACTACAACCTGG...TTGTTGTTGTTTTTGACACATCACACTATGCAACCTTGGCTGGCTATGAACACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS-3UTR CCA 90 bp | AGACAAGTTTTTATCAGCAGGTTCAGTATCACAGGAAAGCCATCCTTGGCCAAGCATGGTCCCTGTGATTaGATTAAAAGAGCCACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RQVFISRFSITGKPSLAKHGPCD*IKRATK Trigger: CTTGGTGGCTCTTTTAATCCAATCACAGGGACCATG...CTTGGCCAAGGATGGCTTTCCTGTGATACTGAACCTGCTGATAAAAACTTGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS-3UTR GCA 90 bp | TTGATTCAAATAGAATGGCACTTGCCTCTTAAAAGGCAGCCATACCGGTCAGTTGTGCGGCTCTGTTTGTaGTTATGCTTATTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LIQIEWHLPLKRQPYRSVVRLCL*LCLFFF Trigger: GAAGAAGAATAAGCATAAGCACAAACAGAGCCGCAC...AACTGACCGGTATGGCTGCCTTTTAAGAGGCAAGTGCCATTCTATTTGAATCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS-3UTR TCA 90 bp | TTGTGGCTCACCAGTTCCCTGTGGTATATAAACACAGGTATAAACCTTATTTGGCTTCTTCTTGTGATCTaGATCAGATGGTGTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LWLTSSLWYINTGINLIWLLLVI*IRWCFW Trigger: CCAGAAACACCATCTGATTCAGATCACAAGAAGAAG...CCAAATAAGGTTTATACCTGTGTTTATATACCACAGGGAACTGGTGAGCCACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS-3UTR CCA 90 bp | TTAAATGCCCTGCTGGGTGAGAAAAACCTAGCTTTTCATAACAAATACATCCTCATTCTTCTTCTTGGGTaGCTGAATATGCATCAGACG | + |
|
Preference number: 4 (lower is better) Translates to: LNALLGEKNLAFHNKYILILLLG*LNMHQT Trigger: CGTCTGATGCATATTCAGCCACCCAAGAAGAAGAAT...GAGGATGTATTTGTTATGAAAAGCTAGGTTTTTCTCACCCAGCAGGGCATTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| 3UTR CAA 72 bp | AGTTACTGTTTTCAGACCATGTTCTCTATTCGCATTTaGATTTTCCAGTTCCAGCCTGCTAAGGAAATAATG | + |
|
Preference number: 4 (lower is better) Translates to: SYCFQTMFSIRI*IFQFQPAKEIM Trigger: CATTATTTCCTTAGCAGGCTGGAACTGGAAAATCAAAATGCGAATAGAGAACATGGTCTGAAAACAGTAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS TCA 90 bp | AGAATAGGAGGCTTCTCAATGAGGGATCGGAGGCTGCTGTTGTCATaGGAGCCAGGGAGATCAATCATCCCTGGCAGGTCAGGCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RIGGFSMRDRRLLLS*EPGRSIIPGRSGRK Trigger: CTTCCTGCCTGACCTGCCAGGGATGATTGATCTCCCTGGCTCTCATGACAACAGCAGCCTCCGATCCCTCATTGAGAAGCCTCCTATTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS CCA 90 bp | CGGGCCAGTGTGGAGGCGGAAACCAGACAGCATGGTCCCTGTGATTaGATTAAAAGAGCCACCAAGAATAGGAGGCTTCTCAATGAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RASVEAETRQHGPCD*IKRATKNRRLLNEG Trigger: TCCCTCATTGAGAAGCCTCCTATTCTTGGTGGCTCTTTTAATCCAATCACAGGGACCATGCTGTCTGGTTTCCGCCTCCACACTGGCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS TCA 90 bp | GTGCGGCTCTGTTTGTGCTTATGCTTATTCTTCTTCTTGGGTGGCTaGATATGCATCAGACGACACTGCTCTGGCAACGGGCCAGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VRLCLCLCLFFFLGG*ICIRRHCSGNGPVW Trigger: CCACACTGGCCCGTTGCCAGAGCAGTGTCGTCTGATGCATATTCAGCCACCCAAGAAGAAGAATAAGCATAAGCACAAACAGAGCCGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS CCA 90 bp | CTGGGTGCGGCTCTGTTTGTGCTTATGCTTATTCTTCTTCTTGGGTaGCTGAATATGCATCAGACGACACTGCTCTGGCAACGGGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LGAALFVLMLILLLG*LNMHQTTLLWQRAS Trigger: ACTGGCCCGTTGCCAGAGCAGTGTCGTCTGATGCATATTCAGCCACCCAAGAAGAAGAATAAGCATAAGCACAAACAGAGCCGCACCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS CCA 90 bp | GATCCTGGGTGCGGCTCTGTTTGTGCTTATGCTTATTCTTCTTCTTaGGTGGCTGAATATGCATCAGACGACACTGCTCTGGCAACGGGC | + |
|
Preference number: 5 (lower is better) Translates to: DPGCGSVCAYAYSSS*VAEYASDDTALATG Trigger: GCCCGTTGCCAGAGCAGTGTCGTCTGATGCATATTCAGCCACCCAAGAAGAAGAATAAGCATAAGCACAAACAGAGCCGCACCCAGGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS CCA 90 bp | TTAGCGGAGGCTGCTGCTGCTGCTGGCTTGAGAGCTGCCCATACCTaGGTGGTCTGGACTATGTCGGTTCTTCTTCTTCTTCTTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LAEAAAAAGLRAAHT*VVWTMSVLLLLLFF Trigger: AAAGAAAAGAAGAAGAAGAAGAACCGACATAGTCCAGACCACCCAGGTATGGGCAGCTCTCAAGCCAGCAGCAGCAGCAGCCTCCGCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS CCA 90 bp | GCTGCTGCTGCTGCTGGCTTGAGAGCTGCCCATACCTGGGTGGTCTaGACTATGTCGGTTCTTCTTCTTCTTCTTTTCTTTCTTCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: AAAAAGLRAAHTWVV*TMSVLLLLLFFLLP Trigger: AGGAAGAAGAAAGAAAAGAAGAAGAAGAAGAACCGACATAGTCCAGACCACCCAGGTATGGGCAGCTCTCAAGCCAGCAGCAGCAGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS TCA 90 bp | TCTTCCCACAGAACTTATTATAGGCCTGCTCCAGGTTGTAGTGTGTaGTTAAATTGGTGCTGCCCGTCAGCTCTGTGCTGCCTGGCAATT | + |
|
Preference number: 5 (lower is better) Translates to: SSHRTYYRPAPGCSV*LNWCCPSALCCLAI Trigger: AATTGCCAGGCAGCACAGAGCTGACGGGCAGCACCAATTTAATCACACACTACAACCTGGAGCAGGCCTATAATAAGTTCTGTGGGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS TCA 90 bp | TCGTTCAGGATCCTCCTCTTTCTTCTTTTTCTTCTTCTTGTGATCTaGATCAGATGGTGTTTCTGGGGGAACAGGATCCTGGGTGCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SFRILLFLLFLLLVI*IRWCFWGNRILGAA Trigger: AGCCGCACCCAGGATCCTGTTCCCCCAGAAACACCATCTGATTCAGATCACAAGAAGAAGAAAAAGAAGAAAGAGGAGGATCCTGAACGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS-3UTR CAA 90 bp | TGCCTGGAAGACAAGTTTTTATCAGCAGGTTCAGTATCACAGGAAAGCCATCCTTGGGTGCGGCTCTGTTaGTGCTTATGCTTATTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CLEDKFLSAGSVSQESHPWVRLC*CLCLFF Trigger: GAAGAATAAGCATAAGCACAAACAGAGCCGCACCCA...AGGATGGCTTTCCTGTGATACTGAACCTGCTGATAAAAACTTGTCTTCCAGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS GCA 72 bp | AGCCGTCGACTTATCCGCTCCTGCGGGGGCCGAGGTTaGCGTCGAGGGCGGGGCTGCGCCTGGACCACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRRLIRSCGGRG*RRGRGCAWTTS Trigger: GGAGGTGGTCCAGGCGCAGCCCCGCCCTCGACGGCAACCTCGGCCCCCGCAGGAGCGGATAAGTCGACGGCT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS CAA 72 bp | CAGCCGTCGACTTATCCGCTCCTGCGGGGGCCGAGGTaGCCGTCGAGGGCGGGGCTGCGCCTGGACCACCTC | + |
|
Preference number: 6 (lower is better) Translates to: QPSTYPLLRGPR*PSRAGLRLDHL Trigger: GAGGTGGTCCAGGCGCAGCCCCGCCCTCGACGGCAACCTCGGCCCCCGCAGGAGCGGATAAGTCGACGGCTG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS CCA 72 bp | GTGGAGGCGGAAACCAGACAGCATGGTCCCTGTGATTaGATTAAAAGAGCCACCAAGAATAGGAGGCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: VEAETRQHGPCD*IKRATKNRRLL Trigger: GAGAAGCCTCCTATTCTTGGTGGCTCTTTTAATCCAATCACAGGGACCATGCTGTCTGGTTTCCGCCTCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS CCA 72 bp | GCTGCTGGCTTGAGAGCTGCCCATACCTGGGTGGTCTaGACTATGTCGGTTCTTCTTCTTCTTCTTTTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: AAGLRAAHTWVV*TMSVLLLLLFF Trigger: AAAGAAAAGAAGAAGAAGAAGAACCGACATAGTCCAGACCACCCAGGTATGGGCAGCTCTCAAGCCAGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS TCA 72 bp | AGAACTTATTATAGGCCTGCTCCAGGTTGTAGTGTGTaGTTAAATTGGTGCTGCCCGTCAGCTCTGTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RTYYRPAPGCSV*LNWCCPSALCC Trigger: GCAGCACAGAGCTGACGGGCAGCACCAATTTAATCACACACTACAACCTGGAGCAGGCCTATAATAAGTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS CCA 72 bp | TCTGAATCAGATGGTGTTTCTGGGGGAACAGGATCCTaGGTGCGGCTCTGTTTGTGCTTATGCTTATTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SESDGVSGGTGS*VRLCLCLCLFF Trigger: GAAGAATAAGCATAAGCACAAACAGAGCCGCACCCAGGATCCTGTTCCCCCAGAAACACCATCTGATTCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS CCA 72 bp | TGCGGCTCTGTTTGTGCTTATGCTTATTCTTCTTCTTaGGTGGCTGAATATGCATCAGACGACACTGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: CGSVCAYAYSSS*VAEYASDDTAL Trigger: CAGAGCAGTGTCGTCTGATGCATATTCAGCCACCCAAGAAGAAGAATAAGCATAAGCACAAACAGAGCCGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||
| CDS TCA 72 bp | ATCCTCCTCTTTCTTCTTTTTCTTCTTCTTGTGATCTaGATCAGATGGTGTTTCTGGGGGAACAGGATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: ILLFLLFLLLVI*IRWCFWGNRIL Trigger: CAGGATCCTGTTCCCCCAGAAACACCATCTGATTCAGATCACAAGAAGAAGAAAAAGAAGAAAGAGGAGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102645.4 |
||