Pregenerated sensors for MED17 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031935Ensembl transcript IDs: ENSMUST00000034411.10, ENSMUST00000213788.2, ENSMUST00000216406.2
Found 190 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCCCTTTCCTCCCTCTAAGTCTGGAGCTTGAATCTGGGTGCTCATaGATGCTAGGCAAGCACCCTCCCACTGGGCTCCACCTCAACTCC | + |
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Preference number: 1 (lower is better) Translates to: CPFLPLSLELESGCS*MLGKHPPTGLHLNS Trigger: GGAGTTGAGGTGGAGCCCAGTGGGAGGGTGCTTGCCTAGCATGCATGAGCACCCAGATTCAAGCTCCAGACTTAGAGGGAGGAAAGGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR TCA 90 bp | GCAAGCACCCTCCCACTGGGCTCCACCTCAACTCCATTATACACATaGCCTGGCTGTTTTTCCTCATGTGTCTCAGCATTCCCTCACTTC | + |
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Preference number: 1 (lower is better) Translates to: ASTLPLGSTSTPLYT*PGCFSSCVSAFPHF Trigger: GAAGTGAGGGAATGCTGAGACACATGAGGAAAAACAGCCAGGTCATGTGTATAATGGAGTTGAGGTGGAGCCCAGTGGGAGGGTGCTTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR TCA 90 bp | AAACAGAGACTGTGTTATGGGACGTCCTTTGGTTCCCTCTGCCTTTaGCCTGTTCATGAAGACCCAGGTGAGGAAGAGGGCTACAAAGGC | + |
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Preference number: 1 (lower is better) Translates to: KQRLCYGTSFGSLCL*PVHEDPGEEEGYKG Trigger: GCCTTTGTAGCCCTCTTCCTCACCTGGGTCTTCATGAACAGGTCAAAGGCAGAGGGAACCAAAGGACGTCCCATAACACAGTCTCTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR CCA 90 bp | CACCCTCCCACTGGGCTCCACCTCAACTCCATTATACACATGACCTaGCTGTTTTTCCTCATGTGTCTCAGCATTCCCTCACTTCATGCT | + |
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Preference number: 1 (lower is better) Translates to: HPPTGLHLNSIIHMT*LFFLMCLSIPSLHA Trigger: AGCATGAAGTGAGGGAATGCTGAGACACATGAGGAAAAACAGCCAGGTCATGTGTATAATGGAGTTGAGGTGGAGCCCAGTGGGAGGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR TCA 90 bp | TCCCTATGGGTCAATGGGGGCCAATTACATTCAAAGCGTCACAGCTaGCCTTCAGGAACATGTCTCAGATGCAGTTGCCTAGAGTGGTAC | + |
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Preference number: 1 (lower is better) Translates to: SLWVNGGQLHSKRHS*PSGTCLRCSCLEWY Trigger: GTACCACTCTAGGCAACTGCATCTGAGACATGTTCCTGAAGGTCAGCTGTGACGCTTTGAATGTAATTGGCCCCCATTGACCCATAGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR TCA 90 bp | AGGAACATGTCTCAGATGCAGTTGCCTAGAGTGGTACCAGGGCAGTaGAGGCTCATTCCTCCAGCTGTCATGTATCAGAATTGGCTTATT | + |
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Preference number: 1 (lower is better) Translates to: RNMSQMQLPRVVPGQ*RLIPPAVMYQNWLI Trigger: AATAAGCCAATTCTGATACATGACAGCTGGAGGAATGAGCCTTCACTGCCCTGGTACCACTCTAGGCAACTGCATCTGAGACATGTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR TCA 90 bp | TGCGTGATCTTGGTGAACTTCAGGAACAGGGCCTGGGGTGCTCAGTaGATCTGTGTTGTAAGATGTTCTTGGGTGATTTTTAAAGAAACA | + |
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Preference number: 1 (lower is better) Translates to: CVILVNFRNRAWGAQ*ICVVRCSWVIFKET Trigger: TGTTTCTTTAAAAATCACCCAAGAACATCTTACAACACAGATTCACTGAGCACCCCAGGCCCTGTTCCTGAAGTTCACCAAGATCACGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR GCA 90 bp | TGGATTGTCAATATATGTGATTCTGCATGTGACCACCATCTCAGCTaGCAATCCTTAAGGGCAGCTGGAGTCATGATTTCTCTTGCCTTT | + |
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Preference number: 1 (lower is better) Translates to: WIVNICDSACDHHLS*QSLRAAGVMISLAF Trigger: AAAGGCAAGAGAAATCATGACTCCAGCTGCCCTTAAGGATTGGCAGCTGAGATGGTGGTCACATGCAGAATCACATATATTGACAATCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR TCA 90 bp | CACTCGGGACTTATATGGAAGACATCTCTCCCTTGTGCTTATAACTaGTCTGCAAACAGTCAGTATTTCTGGAACTTGTTCTGGAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: HSGLIWKTSLPCAYN*SANSQYFWNLFWRK Trigger: TTTTCTCCAGAACAAGTTCCAGAAATACTGACTGTTTGCAGATCAGTTATAAGCACAAGGGAGAGATGTCTTCCATATAAGTCCCGAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034411.10 ENSMUST00000213788.2 |
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| 3UTR GCA 90 bp | TCTCAGCTGCCAATCCTTAAGGGCAGCTGGAGTCATGATTTCTCTTaGCTTTCAAGAATCTCTAATTACAAAACTACGCTACTTGAAAAG | + |
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Preference number: 1 (lower is better) Translates to: SQLPILKGSWSHDFS*LSRISNYKTTLLEK Trigger: CTTTTCAAGTAGCGTAGTTTTGTAATTAGAGATTCTTGAAAGGCAAGAGAAATCATGACTCCAGCTGCCCTTAAGGATTGGCAGCTGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR CCA 90 bp | TCTTCAACCCTTAGTCCTAGGGTTAGAGGCATGAGTTGTCACACTTaGCACATCTCCTTTATATCTCAACTTGTCAAATTTCAAGTGGAA | + |
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Preference number: 1 (lower is better) Translates to: SSTLSPRVRGMSCHT*HISFISQLVKFQVE Trigger: TTCCACTTGAAATTTGACAAGTTGAGATATAAAGGAGATGTGCCAAGTGTGACAACTCATGCCTCTAACCCTAGGACTAAGGGTTGAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR TCA 90 bp | CTTTATATCTCAACTTGTCAAATTTCAAGTGGAATGCAAAGGCAGTaGCTACTAACAGGGAAAACAGAGACTGTGTTATGGGACGTCCTT | + |
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Preference number: 1 (lower is better) Translates to: LYISTCQISSGMQRQ*LLTGKTETVLWDVL Trigger: AAGGACGTCCCATAACACAGTCTCTGTTTTCCCTGTTAGTAGTCACTGCCTTTGCATTCCACTTGAAATTTGACAAGTTGAGATATAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR CCA 90 bp | ACACTTGGCACATCTCCTTTATATCTCAACTTGTCAAATTTCAAGTaGAATGCAAAGGCAGTGACTACTAACAGGGAAAACAGAGACTGT | + |
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Preference number: 1 (lower is better) Translates to: TLGTSPLYLNLSNFK*NAKAVTTNRENRDC Trigger: ACAGTCTCTGTTTTCCCTGTTAGTAGTCACTGCCTTTGCATTCCACTTGAAATTTGACAAGTTGAGATATAAAGGAGATGTGCCAAGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR TCA 90 bp | ACTGTACATACATTTTTCATTCCAAAGTACTCGTCACTTATAAAGTaGGAGAATTCAGGCTGCAAAGTAAACGTAACTTTTAAACAGGGC | + |
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Preference number: 1 (lower is better) Translates to: TVHTFFIPKYSSLIK*ENSGCKVNVTFKQG Trigger: GCCCTGTTTAAAAGTTACGTTTACTTTGCAGCCTGAATTCTCTCACTTTATAAGTGACGAGTACTTTGGAATGAAAAATGTATGTACAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034411.10 ENSMUST00000213788.2 |
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| 3UTR-3UTR TCA 90 bp | GAATCTGGGTGCTCATGCATGCTAGGCAAGCACCCTCCCACTGGGCTCCACCTCCCTTGTGCTTATAACTaGTCTGCAAACAGTCAGTAT | + |
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Preference number: 2 (lower is better) Translates to: ESGCSCMLGKHPPTGLHLPCAYN*SANSQY Trigger: ATACTGACTGTTTGCAGATCAGTTATAAGCACAAGG...GAGGTGGAGCCCAGTGGGAGGGTGCTTGCCTAGCATGCATGAGCACCCAGATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR-3UTR TCA 90 bp | ACACACACATCACAGTACACATTCCAACCATCACCCCCAATGCCCTTTCCTCCCCAGGAGCAGCTGACTTaGGAGACAGCTCATATGGGT | + |
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Preference number: 2 (lower is better) Translates to: THTSQYTFQPSPPMPFPPQEQLT*ETAHMG Trigger: ACCCATATGAGCTGTCTCTCAAGTCAGCTGCTCCTG...GGGAGGAAAGGGCATTGGGGGTGATGGTTGGAATGTGTACTGTGATGTGTGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR CAA 90 bp | GTGACTACTAACAGGGAAAACAGAGACTGTGTTATGGGACGTCCTTaGGTTCCCTCTGCCTTTGACCTGTTCATGAAGACCCAGGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: VTTNRENRDCVMGRP*VPSAFDLFMKTQVR Trigger: CCTCACCTGGGTCTTCATGAACAGGTCAAAGGCAGAGGGAACCAAAGGACGTCCCATAACACAGTCTCTGTTTTCCCTGTTAGTAGTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR CAA 90 bp | GCAAGTCCCCAATGCAGTGCAAGTTCCCTCTCCCCAACCTCACTTTaGAGAACGCAGTGTCTTTCTAGACACACACACATCACAGTACAC | + |
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Preference number: 2 (lower is better) Translates to: ASPQCSASSLSPTSL*RTQCLSRHTHITVH Trigger: GTGTACTGTGATGTGTGTGTGTCTAGAAAGACACTGCGTTCTCAAAAGTGAGGTTGGGGAGAGGGAACTTGCACTGCATTGGGGACTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR-3UTR TCA 90 bp | ACAGAGACTGTGTTATGGGACGTCCTTTGGTTCCCTCTGCCTTTGACCTGTTCAGCCTGGGGTGCTCAGTaGATCTGTGTTGTAAGATGT | + |
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Preference number: 2 (lower is better) Translates to: TETVLWDVLWFPLPLTCSAWGAQ*ICVVRC Trigger: ACATCTTACAACACAGATTCACTGAGCACCCCAGGC...TGAACAGGTCAAAGGCAGAGGGAACCAAAGGACGTCCCATAACACAGTCTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR-3UTR CCA 90 bp | CATGACCTGGCTGTTTTTCCTCATGTGTCTCAGCATTCCCTCACTTCATGCTTCTTATGGGACGTCCTTTaGTTCCCTCTGCCTTTGACC | + |
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Preference number: 2 (lower is better) Translates to: HDLAVFPHVSQHSLTSCFLWDVL*FPLPLT Trigger: GGTCAAAGGCAGAGGGAACCAAAGGACGTCCCATAA...GAAGCATGAAGTGAGGGAATGCTGAGACACATGAGGAAAAACAGCCAGGTCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR-3UTR CCA 90 bp | ATGCAGTGCAAGTTCCCTCTCCCCAACCTCACTTTTGAGAACGCAGTGTCTTTCACAGAGACTGTGTTATaGGACGTCCTTTGGTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: MQCKFPLPNLTFENAVSFTETVL*DVLWFP Trigger: AGGGAACCAAAGGACGTCCCATAACACAGTCTCTGT...GAAAGACACTGCGTTCTCAAAAGTGAGGTTGGGGAGAGGGAACTTGCACTGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR-3UTR TCA 90 bp | CCCCACAGTGACTTCACTTCCTCCAGCAAGGTGACACCTTCTAATAGTGCCACTTCGTCACTTATAAAGTaGGAGAATTCAGGCTGCAAA | + |
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Preference number: 2 (lower is better) Translates to: PHSDFTSSSKVTPSNSATSSLIK*ENSGCK Trigger: TTTGCAGCCTGAATTCTCTCACTTTATAAGTGACGA...AGTGGCACTATTAGAAGGTGTCACCTTGCTGGAGGAAGTGAAGTCACTGTGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR-3UTR TCA 90 bp | CCTCAACTCCATTATACACATGACCTGGCTGTTTTTCCTCATGTGTCTCAGCATAACAGCAGGAGCAGCTaGCTTGAGAGACAGCTCATA | + |
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Preference number: 2 (lower is better) Translates to: PQLHYTHDLAVFPHVSQHNSRSS*LERQLI Trigger: TATGAGCTGTCTCTCAAGTCAGCTGCTCCTGCTGTT...ATGCTGAGACACATGAGGAAAAACAGCCAGGTCATGTGTATAATGGAGTTGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR-3UTR TCA 90 bp | ATTGCTGTGAAGAGACACCATGACCAGAGCAACTCCTACAAAGCAAAACATCTAGGTTCCCTCTGCCTTTaGCCTGTTCATGAAGACCCA | + |
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Preference number: 2 (lower is better) Translates to: IAVKRHHDQSNSYKAKHLGSLCL*PVHEDP Trigger: TGGGTCTTCATGAACAGGTCAAAGGCAGAGGGAACC...TAGATGTTTTGCTTTGTAGGAGTTGCTCTGGTCATGGTGTCTCTTCACAGCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR-3UTR CCA 90 bp | GGAACATGTCTCAGATGCAGTTGCCTAGAGTGGTACCAGGGCAGTGAAGGCTCAGAGAGACAGCTCATATaGGTTATGAGAAATTCACAA | + |
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Preference number: 2 (lower is better) Translates to: GTCLRCSCLEWYQGSEGSERQLI*VMRNSQ Trigger: TTGTGAATTTCTCATAACCCATATGAGCTGTCTCTC...TGAGCCTTCACTGCCCTGGTACCACTCTAGGCAACTGCATCTGAGACATGTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR-3UTR CCA 90 bp | GGAACATGTCTCAGATGCAGTTGCCTAGAGTGGTACCAGGGCAGTGAAGGCTCAATTATACACATGACCTaGCTGTTTTTCCTCATGTGT | + |
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Preference number: 2 (lower is better) Translates to: GTCLRCSCLEWYQGSEGSIIHMT*LFFLMC Trigger: ACACATGAGGAAAAACAGCCAGGTCATGTGTATAAT...TGAGCCTTCACTGCCCTGGTACCACTCTAGGCAACTGCATCTGAGACATGTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR-3UTR CCA 90 bp | CCCCACAGTGACTTCACTTCCTCCAGCAAGGTGACACCTTCTAATAGTGCCACTAACAGTCAGTATTTCTaGAACTTGTTCTGGAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: PHSDFTSSSKVTPSNSATNSQYF*NLFWRK Trigger: TTTTCTCCAGAACAAGTTCCAGAAATACTGACTGTT...AGTGGCACTATTAGAAGGTGTCACCTTGCTGGAGGAAGTGAAGTCACTGTGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR-3UTR CCA 90 bp | CATGACCTGGCTGTTTTTCCTCATGTGTCTCAGCATTCCCTCACTTCATGCTTCTTGTCAAATTTCAAGTaGAATGCAAAGGCAGTGACT | + |
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Preference number: 2 (lower is better) Translates to: HDLAVFPHVSQHSLTSCFLSNFK*NAKAVT Trigger: AGTCACTGCCTTTGCATTCCACTTGAAATTTGACAA...GAAGCATGAAGTGAGGGAATGCTGAGACACATGAGGAAAAACAGCCAGGTCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR GCA 72 bp | CTCCCTCTAAGTCTGGAGCTTGAATCTGGGTGCTCATaGATGCTAGGCAAGCACCCTCCCACTGGGCTCCAC | + |
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Preference number: 3 (lower is better) Translates to: LPLSLELESGCS*MLGKHPPTGLH Trigger: GTGGAGCCCAGTGGGAGGGTGCTTGCCTAGCATGCATGAGCACCCAGATTCAAGCTCCAGACTTAGAGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR GCA 72 bp | CCTTTCCTCCCTCTAAGTCTGGAGCTTGAATCTGGGTaGTCATGCATGCTAGGCAAGCACCCTCCCACTGGG | + |
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Preference number: 3 (lower is better) Translates to: PFLPLSLELESG*SCMLGKHPPTG Trigger: CCCAGTGGGAGGGTGCTTGCCTAGCATGCATGAGCACCCAGATTCAAGCTCCAGACTTAGAGGGAGGAAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR CCA 72 bp | TGGGTGCTCATGCATGCTAGGCAAGCACCCTCCCACTaGGCTCCACCTCAACTCCATTATACACATGACCTG | + |
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Preference number: 3 (lower is better) Translates to: WVLMHARQAPSH*APPQLHYTHDL Trigger: CAGGTCATGTGTATAATGGAGTTGAGGTGGAGCCCAGTGGGAGGGTGCTTGCCTAGCATGCATGAGCACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR TCA 72 bp | CTGTGTTATGGGACGTCCTTTGGTTCCCTCTGCCTTTaGCCTGTTCATGAAGACCCAGGTGAGGAAGAGGGC | + |
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Preference number: 3 (lower is better) Translates to: LCYGTSFGSLCL*PVHEDPGEEEG Trigger: GCCCTCTTCCTCACCTGGGTCTTCATGAACAGGTCAAAGGCAGAGGGAACCAAAGGACGTCCCATAACACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR TCA 72 bp | CCCACCCCCACAGTGACTTCACTTCCTCCAGCAAGGTaGCACCTTCTAATAGTGCCACTCCCTATGGGTCAA | + |
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Preference number: 3 (lower is better) Translates to: PTPTVTSLPPAR*HLLIVPLPMGQ Trigger: TTGACCCATAGGGAGTGGCACTATTAGAAGGTGTCACCTTGCTGGAGGAAGTGAAGTCACTGTGGGGGTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR TCA 72 bp | CTCCCACTGGGCTCCACCTCAACTCCATTATACACATaGCCTGGCTGTTTTTCCTCATGTGTCTCAGCATTC | + |
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Preference number: 3 (lower is better) Translates to: LPLGSTSTPLYT*PGCFSSCVSAF Trigger: GAATGCTGAGACACATGAGGAAAAACAGCCAGGTCATGTGTATAATGGAGTTGAGGTGGAGCCCAGTGGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR TCA 72 bp | TCTCAGATGCAGTTGCCTAGAGTGGTACCAGGGCAGTaGAGGCTCATTCCTCCAGCTGTCATGTATCAGAAT | + |
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Preference number: 3 (lower is better) Translates to: SQMQLPRVVPGQ*RLIPPAVMYQN Trigger: ATTCTGATACATGACAGCTGGAGGAATGAGCCTTCACTGCCCTGGTACCACTCTAGGCAACTGCATCTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR TCA 72 bp | GTCAATGGGGGCCAATTACATTCAAAGCGTCACAGCTaGCCTTCAGGAACATGTCTCAGATGCAGTTGCCTA | + |
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Preference number: 3 (lower is better) Translates to: VNGGQLHSKRHS*PSGTCLRCSCL Trigger: TAGGCAACTGCATCTGAGACATGTTCCTGAAGGTCAGCTGTGACGCTTTGAATGTAATTGGCCCCCATTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR GCA 72 bp | ACACATCACAGTACACATTCCAACCATCACCCCCAATaGCCTTTCCTCCCTCTAAGTCTGGAGCTTGAATCT | + |
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Preference number: 3 (lower is better) Translates to: THHSTHSNHHPQ*PFLPLSLELES Trigger: AGATTCAAGCTCCAGACTTAGAGGGAGGAAAGGGCATTGGGGGTGATGGTTGGAATGTGTACTGTGATGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR CCA 72 bp | ACTGGGCTCCACCTCAACTCCATTATACACATGACCTaGCTGTTTTTCCTCATGTGTCTCAGCATTCCCTCA | + |
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Preference number: 3 (lower is better) Translates to: TGLHLNSIIHMT*LFFLMCLSIPS Trigger: TGAGGGAATGCTGAGACACATGAGGAAAAACAGCCAGGTCATGTGTATAATGGAGTTGAGGTGGAGCCCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR TCA 72 bp | AATGCAGTGCAAGTTCCCTCTCCCCAACCTCACTTTTaGGAACGCAGTGTCTTTCTAGACACACACACATCA | + |
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Preference number: 3 (lower is better) Translates to: NAVQVPSPQPHF*ERSVFLDTHTS Trigger: TGATGTGTGTGTGTCTAGAAAGACACTGCGTTCTCAAAAGTGAGGTTGGGGAGAGGGAACTTGCACTGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR GCA 72 bp | AATATATGTGATTCTGCATGTGACCACCATCTCAGCTaGCAATCCTTAAGGGCAGCTGGAGTCATGATTTCT | + |
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Preference number: 3 (lower is better) Translates to: NICDSACDHHLS*QSLRAAGVMIS Trigger: AGAAATCATGACTCCAGCTGCCCTTAAGGATTGGCAGCTGAGATGGTGGTCACATGCAGAATCACATATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR GCA 72 bp | TTCCTCCAGCTGTCATGTATCAGAATTGGCTTATTATaGTGTTTCCTGACATCAGACACCTCTAGAATGAAC | + |
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Preference number: 3 (lower is better) Translates to: FLQLSCIRIGLL*CFLTSDTSRMN Trigger: GTTCATTCTAGAGGTGTCTGATGTCAGGAAACAGCATAATAAGCCAATTCTGATACATGACAGCTGGAGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR CCA 72 bp | TGCTGTTTCCTGACATCAGACACCTCTAGAATGAACTaGGAAACTACTGTTACCACAACTACATCAAGTTTC | + |
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Preference number: 3 (lower is better) Translates to: CCFLTSDTSRMN*ETTVTTTTSSF Trigger: GAAACTTGATGTAGTTGTGGTAACAGTAGTTTCCCAGTTCATTCTAGAGGTGTCTGATGTCAGGAAACAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR TCA 72 bp | TCAACTTGTCAAATTTCAAGTGGAATGCAAAGGCAGTaGCTACTAACAGGGAAAACAGAGACTGTGTTATGG | + |
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Preference number: 3 (lower is better) Translates to: STCQISSGMQRQ*LLTGKTETVLW Trigger: CCATAACACAGTCTCTGTTTTCCCTGTTAGTAGTCACTGCCTTTGCATTCCACTTGAAATTTGACAAGTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR GCA 72 bp | CCAATCCTTAAGGGCAGCTGGAGTCATGATTTCTCTTaGCTTTCAAGAATCTCTAATTACAAAACTACGCTA | + |
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Preference number: 3 (lower is better) Translates to: PILKGSWSHDFS*LSRISNYKTTL Trigger: TAGCGTAGTTTTGTAATTAGAGATTCTTGAAAGGCAAGAGAAATCATGACTCCAGCTGCCCTTAAGGATTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR CCA 72 bp | CTTAGTCCTAGGGTTAGAGGCATGAGTTGTCACACTTaGCACATCTCCTTTATATCTCAACTTGTCAAATTT | + |
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Preference number: 3 (lower is better) Translates to: LSPRVRGMSCHT*HISFISQLVKF Trigger: AAATTTGACAAGTTGAGATATAAAGGAGATGTGCCAAGTGTGACAACTCATGCCTCTAACCCTAGGACTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| 3UTR TCA 72 bp | GGAAACTACTGTTACCACAACTACATCAAGTTTCACTaGGAAGAGCGGTGGATTGTCAATATATGTGATTCT | + |
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Preference number: 3 (lower is better) Translates to: GNYCYHNYIKFH*EERWIVNICDS Trigger: AGAATCACATATATTGACAATCCACCGCTCTTCTCAGTGAAACTTGATGTAGTTGTGGTAACAGTAGTTTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| CDS-3UTR CCA 90 bp | GAATCTGGGTGCTCATGCATGCTAGGCAAGCACCCTCCCACTGGGCTCCACCTCCCAGGTTCTGCGACATaGACAGCGGCTGCAGGTACG | + |
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Preference number: 4 (lower is better) Translates to: ESGCSCMLGKHPPTGLHLPGSAT*TAAAGT Trigger: CGTACCTGCAGCCGCTGTCCATGTCGCAGAACCTGG...GAGGTGGAGCCCAGTGGGAGGGTGCTTGCCTAGCATGCATGAGCACCCAGATTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| CDS-3UTR GCA 90 bp | GGAACATGTCTCAGATGCAGTTGCCTAGAGTGGTACCAGGGCAGTGAAGGCTCATCAAGGCCCACCTCCTaGACCTGCTTCTCGCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GTCLRCSCLEWYQGSEGSSRPTS*TCFSQA Trigger: GGCCTGCGAGAAGCAGGTGCAGGAGGTGGGCCTTGA...TGAGCCTTCACTGCCCTGGTACCACTCTAGGCAACTGCATCTGAGACATGTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR GCA 90 bp | ATGCAGTGCAAGTTCCCTCTCCCCAACCTCACTTTTGAGAACGCAGTGTCTTTCCCCACCTCCTGCACCTaGTTCTCGCAGGCCGACTCG | + |
|
Preference number: 4 (lower is better) Translates to: MQCKFPLPNLTFENAVSFPTSCT*FSQADS Trigger: CGAGTCGGCCTGCGAGAAGCAGGTGCAGGAGGTGGG...GAAAGACACTGCGTTCTCAAAAGTGAGGTTGGGGAGAGGGAACTTGCACTGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR GCA 90 bp | CATGACCTGGCTGTTTTTCCTCATGTGTCTCAGCATTCCCTCACTTCATGCTTCAGGCGCGCCAGGTTCTaGGACATGGACAGCGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HDLAVFPHVSQHSLTSCFRRARF*DMDSGC Trigger: GCAGCCGCTGTCCATGTCGCAGAACCTGGCGCGCCT...GAAGCATGAAGTGAGGGAATGCTGAGACACATGAGGAAAAACAGCCAGGTCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR CCA 90 bp | GGAACATGTCTCAGATGCAGTTGCCTAGAGTGGTACCAGGGCAGTGAAGGCTCACAGTGGGCCTGGATCTaGGGGTCCTCAATGCGACTT | + |
|
Preference number: 4 (lower is better) Translates to: GTCLRCSCLEWYQGSEGSQWAWI*GSSMRL Trigger: AAGTCGCATTGAGGACCCCCAGATCCAGGCCCACTG...TGAGCCTTCACTGCCCTGGTACCACTCTAGGCAACTGCATCTGAGACATGTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR GCA 90 bp | CCATCTCAGCTGCCAATCCTTAAGGGCAGCTGGAGTCATGATTTCTCTTGCCTTGACATGGACAGCGGCTaGAGGTACGTCTCGGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSQLPILKGSWSHDFSCLDMDSG*RYVSVP Trigger: TGGCACCGAGACGTACCTGCAGCCGCTGTCCATGTC...AAGGCAAGAGAAATCATGACTCCAGCTGCCCTTAAGGATTGGCAGCTGAGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR CCA 90 bp | GGAACATGTCTCAGATGCAGTTGCCTAGAGTGGTACCAGGGCAGTGAAGGCTCATCTCAGCCACTGACTTaGTCAGTCTTTCTGCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GTCLRCSCLEWYQGSEGSSQPLT*SVFLPP Trigger: AGGGGGCAGAAAGACTGACCAAGTCAGTGGCTGAGA...TGAGCCTTCACTGCCCTGGTACCACTCTAGGCAACTGCATCTGAGACATGTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR CCA 90 bp | GGAACATGTCTCAGATGCAGTTGCCTAGAGTGGTACCAGGGCAGTGAAGGCTCAGTGGGGAACCTGGCTTaGATTTGGGCAAAGGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GTCLRCSCLEWYQGSEGSVGNLA*IWAKVS Trigger: AGAGACCTTTGCCCAAATCCAAGCCAGGTTCCCCAC...TGAGCCTTCACTGCCCTGGTACCACTCTAGGCAACTGCATCTGAGACATGTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR CCA 90 bp | ACACACACATCACAGTACACATTCCAACCATCACCCCCAATGCCCTTTCCTCCCGGCCCAAGTCCCACATaGTTACTGAAGCTGAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: THTSQYTFQPSPPMPFPPGPSPT*LLKLRT Trigger: GGTCCTCAGCTTCAGTAACCATGTGGGACTTGGGCC...GGGAGGAAAGGGCATTGGGGGTGATGGTTGGAATGTGTACTGTGATGTGTGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR TCA 90 bp | CCCCACAGTGACTTCACTTCCTCCAGCAAGGTGACACCTTCTAATAGTGCCACTGTGCACCTGGTGCTGTaGCATCTGAGACAGAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PHSDFTSSSKVTPSNSATVHLVL*HLRQKE Trigger: TTCCTTCTGTCTCAGATGTCACAGCACCAGGTGCAC...AGTGGCACTATTAGAAGGTGTCACCTTGCTGGAGGAAGTGAAGTCACTGTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR CCA 90 bp | ACAGAGACTGTGTTATGGGACGTCCTTTGGTTCCCTCTGCCTTTGACCTGTTCATTGATGTTTGACCAGTaGGCCTGGATCTGGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TETVLWDVLWFPLPLTCSLMFDQ*AWIWGS Trigger: GGACCCCCAGATCCAGGCCCACTGGTCAAACATCAA...TGAACAGGTCAAAGGCAGAGGGAACCAAAGGACGTCCCATAACACAGTCTCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR GCA 90 bp | GGAAGACATCTCTCCCTTGTGCTTATAACTGATCTGCAAACAGTCAGTATTTCTATCGCCGTCAGGCCCTaGCGCCTCCTCCTCCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GRHLSLVLITDLQTVSISIAVRP*RLLLLR Trigger: TCTGAGGAGGAGGAGGCGGCAGGGCCTGACGGCGAT...AGAAATACTGACTGTTTGCAGATCAGTTATAAGCACAAGGGAGAGATGTCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR TCA 90 bp | AGTACACATTCCAACCATCACCCCCAATGCCCTTTCCTCCCTCTAAGTCTGGAGAAAAGCTTGAGGACCTaGGAGTCTCATCCTCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: STHSNHHPQCPFLPLSLEKSLRT*ESHPLV Trigger: CACAAGAGGATGAGACTCTCAGGTCCTCAAGCTTTT...CTCCAGACTTAGAGGGAGGAAAGGGCATTGGGGGTGATGGTTGGAATGTGTACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR GCA 90 bp | ACACACACATCACAGTACACATTCCAACCATCACCCCCAATGCCCTTTCCTCCCTTCTTGGAGATCAGCTaGAGCGTTTGTGGACTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: THTSQYTFQPSPPMPFPPFLEIS*SVCGLC Trigger: ACAGAGTCCACAAACGCTGCAGCTGATCTCCAAGAA...GGGAGGAAAGGGCATTGGGGGTGATGGTTGGAATGTGTACTGTGATGTGTGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR GCA 90 bp | CCCCACAGTGACTTCACTTCCTCCAGCAAGGTGACACCTTCTAATAGTGCCACTACACCAATGTTCAACTaGAGCTGGATGGACTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PHSDFTSSSKVTPSNSATTPMFN*SWMDLQ Trigger: CTGCAAGTCCATCCAGCTGCAGTTGAACATTGGTGT...AGTGGCACTATTAGAAGGTGTCACCTTGCTGGAGGAAGTGAAGTCACTGTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR CCA 90 bp | ACACACACATCACAGTACACATTCCAACCATCACCCCCAATGCCCTTTCCTCCCAGCACTTGCTGGGTGTaGCATCACAATGGAACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: THTSQYTFQPSPPMPFPPSTCWV*HHNGTQ Trigger: TTGAGTTCCATTGTGATGCCACACCCAGCAAGTGCT...GGGAGGAAAGGGCATTGGGGGTGATGGTTGGAATGTGTACTGTGATGTGTGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR TCA 90 bp | ACACACACATCACAGTACACATTCCAACCATCACCCCCAATGCCCTTTCCTCCCACTCATACACATCATTaGTGTTTGACCAGTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: THTSQYTFQPSPPMPFPPTHTHH*CLTSGP Trigger: AGGCCCACTGGTCAAACATCAATGATGTGTATGAGT...GGGAGGAAAGGGCATTGGGGGTGATGGTTGGAATGTGTACTGTGATGTGTGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR GCA 90 bp | AGACATCTCTCCCTTGTGCTTATAACTGATCTGCAAACAGTCAGTATTTCTGGAGCAGGTACGTCTCGGTaGCATCAAGGCCCACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RHLSLVLITDLQTVSISGAGTSR*HQGPPP Trigger: AGGAGGTGGGCCTTGATGGCACCGAGACGTACCTGC...TCCAGAAATACTGACTGTTTGCAGATCAGTTATAAGCACAAGGGAGAGATGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR GCA 90 bp | CCTCAACTCCATTATACACATGACCTGGCTGTTTTTCCTCATGTGTCTCAGCATCTGAAGCTGAGGACCTaGCAGCCCATAACCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PQLHYTHDLAVFPHVSQHLKLRT*QPITLA Trigger: TGCCAAGGTTATGGGCTGGCAGGTCCTCAGCTTCAG...ATGCTGAGACACATGAGGAAAAACAGCCAGGTCATGTGTATAATGGAGTTGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR CCA 90 bp | CCTCAACTCCATTATACACATGACCTGGCTGTTTTTCCTCATGTGTCTCAGCATCCAGTGTGGGGAACCTaGCTTGGATTTGGGCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PQLHYTHDLAVFPHVSQHPVWGT*LGFGQR Trigger: CCTTTGCCCAAATCCAAGCCAGGTTCCCCACACTGG...ATGCTGAGACACATGAGGAAAAACAGCCAGGTCATGTGTATAATGGAGTTGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| 3UTR CAA 72 bp | AACAGGGAAAACAGAGACTGTGTTATGGGACGTCCTTaGGTTCCCTCTGCCTTTGACCTGTTCATGAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: NRENRDCVMGRP*VPSAFDLFMKT Trigger: GGTCTTCATGAACAGGTCAAAGGCAGAGGGAACCAAAGGACGTCCCATAACACAGTCTCTGTTTTCCCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| 3UTR CAA 72 bp | CAATGCAGTGCAAGTTCCCTCTCCCCAACCTCACTTTaGAGAACGCAGTGTCTTTCTAGACACACACACATC | + |
|
Preference number: 4 (lower is better) Translates to: QCSASSLSPTSL*RTQCLSRHTHI Trigger: GATGTGTGTGTGTCTAGAAAGACACTGCGTTCTCAAAAGTGAGGTTGGGGAGAGGGAACTTGCACTGCATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR TCA 90 bp | GGAACATGTCTCAGATGCAGTTGCCTAGAGTGGTACCAGGGCAGTGAAGGCTCATCTGGAGCCTGTTTCTaGATAGAAACCTTGATATAC | + |
|
Preference number: 4 (lower is better) Translates to: GTCLRCSCLEWYQGSEGSSGACF*IETLIY Trigger: GTATATCAAGGTTTCTATTCAGAAACAGGCTCCAGA...TGAGCCTTCACTGCCCTGGTACCACTCTAGGCAACTGCATCTGAGACATGTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR TCA 90 bp | ATGCAGTGCAAGTTCCCTCTCCCCAACCTCACTTTTGAGAACGCAGTGTCTTTCGAAAGGGCTGAGAGATaGTCTGGTTTTTCACCACAA | + |
|
Preference number: 4 (lower is better) Translates to: MQCKFPLPNLTFENAVSFERAER*SGFSPQ Trigger: TTGTGGTGAAAAACCAGATCATCTCTCAGCCCTTTC...GAAAGACACTGCGTTCTCAAAAGTGAGGTTGGGGAGAGGGAACTTGCACTGCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR GCA 90 bp | CATCTCTCCCTTGTGCTTATAACTGATCTGCAAACAGTCAGTATTTCTGGAACTTTCCTCAGCTTCCAGTaGTGCCGGAGTCTCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HLSLVLITDLQTVSISGTFLSFQ*CRSLRS Trigger: GCTCCTGAGACTCCGGCAGCACTGGAAGCTGAGGAA...AGTTCCAGAAATACTGACTGTTTGCAGATCAGTTATAAGCACAAGGGAGAGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR CCA 90 bp | CATGACCTGGCTGTTTTTCCTCATGTGTCTCAGCATTCCCTCACTTCATGCTTCGGCCACAAAGAAGGTTaGAATTTTACCAACCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HDLAVFPHVSQHSLTSCFGHKEG*NFTNPS Trigger: GGAGGGGTTGGTAAAATTCCAACCTTCTTTGTGGCC...GAAGCATGAAGTGAGGGAATGCTGAGACACATGAGGAAAAACAGCCAGGTCATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR TCA 90 bp | AGTTGTCACACTTGGCACATCTCCTTTATATCTCAACTTGTCAAATTTCAAGTGGGAGGAAGAGCATCCTaGGAGACGGGGTCCAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SCHTWHISFISQLVKFQVGGRAS*ETGSRV Trigger: GACTCTGGACCCCGTCTCTCAGGATGCTCTTCCTCC...CACTTGAAATTTGACAAGTTGAGATATAAAGGAGATGTGCCAAGTGTGACAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR TCA 90 bp | CCTCAACTCCATTATACACATGACCTGGCTGTTTTTCCTCATGTGTCTCAGCATTGGTGCTGTGACATCTaGGACAGAAGGAAGTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PQLHYTHDLAVFPHVSQHWCCDI*DRRKSC Trigger: ACAGGACTTCCTTCTGTCTCAGATGTCACAGCACCA...ATGCTGAGACACATGAGGAAAAACAGCCAGGTCATGTGTATAATGGAGTTGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR GCA 90 bp | GGAAGACATCTCTCCCTTGTGCTTATAACTGATCTGCAAACAGTCAGTATTTCTCTGAAGCTGAGGACCTaGCAGCCCATAACCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GRHLSLVLITDLQTVSISLKLRT*QPITLA Trigger: TGCCAAGGTTATGGGCTGGCAGGTCCTCAGCTTCAG...AGAAATACTGACTGTTTGCAGATCAGTTATAAGCACAAGGGAGAGATGTCTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034411.10 ENSMUST00000213788.2 |
||
| CDS-3UTR CCA 90 bp | ATTGCTGTGAAGAGACACCATGACCAGAGCAACTCCTACAAAGCAAAACATCTACAGCTGCAGCGTTTGTaGACTCTGTTTGGGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IAVKRHHDQSNSYKAKHLQLQRL*TLFGRK Trigger: CTTCCTCCCAAACAGAGTCCACAAACGCTGCAGCTG...TAGATGTTTTGCTTTGTAGGAGTTGCTCTGGTCATGGTGTCTCTTCACAGCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR CCA 90 bp | CCTCAACTCCATTATACACATGACCTGGCTGTTTTTCCTCATGTGTCTCAGCATAGTCTCATCCTCTTGTaGCCAAAGGGAGCACTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PQLHYTHDLAVFPHVSQHSLILL*PKGALA Trigger: AGCAAGTGCTCCCTTTGGCCACAAGAGGATGAGACT...ATGCTGAGACACATGAGGAAAAACAGCCAGGTCATGTGTATAATGGAGTTGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR CCA 90 bp | AGACATCTCTCCCTTGTGCTTATAACTGATCTGCAAACAGTCAGTATTTCTGGAGGCCCAAGTCCCACATaGTTACTGAAGCTGAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: RHLSLVLITDLQTVSISGGPSPT*LLKLRT Trigger: GGTCCTCAGCTTCAGTAACCATGTGGGACTTGGGCC...TCCAGAAATACTGACTGTTTGCAGATCAGTTATAAGCACAAGGGAGAGATGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034411.10 ENSMUST00000213788.2 |
||
| CDS-3UTR TCA 90 bp | ACAGAGACTGTGTTATGGGACGTCCTTTGGTTCCCTCTGCCTTTGACCTGTTCATTTTTATCAAAAGCTTaGGGACCTGAGAGTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: TETVLWDVLWFPLPLTCSFLSKA*GPESLI Trigger: GATGAGACTCTCAGGTCCTCAAGCTTTTGATAAAAA...TGAACAGGTCAAAGGCAGAGGGAACCAAAGGACGTCCCATAACACAGTCTCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR TCA 90 bp | CATCTCTCCCTTGTGCTTATAACTGATCTGCAAACAGTCAGTATTTCTGGAACTGTGCACCTGGTGCTGTaGCATCTGAGACAGAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HLSLVLITDLQTVSISGTVHLVL*HLRQKE Trigger: TTCCTTCTGTCTCAGATGTCACAGCACCAGGTGCAC...AGTTCCAGAAATACTGACTGTTTGCAGATCAGTTATAAGCACAAGGGAGAGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034411.10 ENSMUST00000213788.2 |
||
| CDS-3UTR GCA 90 bp | CCTCAACTCCATTATACACATGACCTGGCTGTTTTTCCTCATGTGTCTCAGCATTCTGCGGCACACTTCTaGGACTTCTTATCATCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PQLHYTHDLAVFPHVSQHSAAHF*DFLSSE Trigger: CTCAGATGATAAGAAGTCGCAGAAGTGTGCCGCAGA...ATGCTGAGACACATGAGGAAAAACAGCCAGGTCATGTGTATAATGGAGTTGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR GCA 90 bp | GTCCCTATTAAATTTTACTCTTTCCCCCTTGCAAACATAATCCACAGCATGAGTTCTCTGATCAGCAGGTaGAGGTTGTGCTCCAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: VPIKFYSFPLANIIHSMSSLISR*RLCSRT Trigger: CGTCCTGGAGCACAACCTGCACCTGCTGATCAGAGA...ACTCATGCTGTGGATTATGTTTGCAAGGGGGAAAGAGTAAAATTTAATAGGGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR GCA 90 bp | ATTGCTGTGAAGAGACACCATGACCAGAGCAACTCCTACAAAGCAAAACATCTAGTCCTCAATGCGACTTaGCAAGCTGTCAATGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: IAVKRHHDQSNSYKAKHLVLNAT*QAVNGC Trigger: GCAACCATTGACAGCTTGGCAAGTCGCATTGAGGAC...TAGATGTTTTGCTTTGTAGGAGTTGCTCTGGTCATGGTGTCTCTTCACAGCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR GCA 90 bp | AGACATCTCTCCCTTGTGCTTATAACTGATCTGCAAACAGTCAGTATTTCTGGACCGAAGCATTGCCAATaGTCTCTATGGGCCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RHLSLVLITDLQTVSISGPKHCQ*SLWAQV Trigger: GACTTGGGCCCATAGAGAGCATTGGCAATGCTTCGG...TCCAGAAATACTGACTGTTTGCAGATCAGTTATAAGCACAAGGGAGAGATGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034411.10 ENSMUST00000213788.2 |
||
| CDS-3UTR GCA 90 bp | GGAAGACATCTCTCCCTTGTGCTTATAACTGATCTGCAAACAGTCAGTATTTCTCCGAAGCATTGCCAATaGTCTCTATGGGCCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GRHLSLVLITDLQTVSISPKHCQ*SLWAQV Trigger: GACTTGGGCCCATAGAGAGCATTGGCAATGCTTCGG...AGAAATACTGACTGTTTGCAGATCAGTTATAAGCACAAGGGAGAGATGTCTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034411.10 ENSMUST00000213788.2 |
||
| CDS-3UTR CCA 90 bp | ACACACACATCACAGTACACATTCCAACCATCACCCCCAATGCCCTTTCCTCCCAGGACAGTAATCTTCTaGTATCTTCTTATCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: THTSQYTFQPSPPMPFPPRTVIF*YLLIQV Trigger: GACTTGGATAAGAAGATACCAGAAGATTACTGTCCT...GGGAGGAAAGGGCATTGGGGGTGATGGTTGGAATGTGTACTGTGATGTGTGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR CCA 90 bp | CCATCTCAGCTGCCAATCCTTAAGGGCAGCTGGAGTCATGATTTCTCTTGCCTTAAGATCACCAATGTCTaGAGCCTGTTTCTGAATAGA | + |
|
Preference number: 4 (lower is better) Translates to: PSQLPILKGSWSHDFSCLKITNV*SLFLNR Trigger: TCTATTCAGAAACAGGCTCCAGACATTGGTGATCTT...AAGGCAAGAGAAATCATGACTCCAGCTGCCCTTAAGGATTGGCAGCTGAGATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR CCA 90 bp | AGACATCTCTCCCTTGTGCTTATAACTGATCTGCAAACAGTCAGTATTTCTGGATGCCAATGCTCTCTATaGGCCCAAGTCCCACATGGT | + |
|
Preference number: 4 (lower is better) Translates to: RHLSLVLITDLQTVSISGCQCSL*AQVPHG Trigger: ACCATGTGGGACTTGGGCCCATAGAGAGCATTGGCA...TCCAGAAATACTGACTGTTTGCAGATCAGTTATAAGCACAAGGGAGAGATGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034411.10 ENSMUST00000213788.2 |
||
| CDS-3UTR TCA 90 bp | CATCTCTCCCTTGTGCTTATAACTGATCTGCAAACAGTCAGTATTTCTGGAACTCACATCATTGATGTTTaGCCAGTGGGCCTGGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: HLSLVLITDLQTVSISGTHIIDV*PVGLDL Trigger: CAGATCCAGGCCCACTGGTCAAACATCAATGATGTG...AGTTCCAGAAATACTGACTGTTTGCAGATCAGTTATAAGCACAAGGGAGAGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR TCA 90 bp | CATCTCTCCCTTGTGCTTATAACTGATCTGCAAACAGTCAGTATTTCTGGAACTTGGTGCTGTGACATCTaGGACAGAAGGAAGTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HLSLVLITDLQTVSISGTWCCDI*DRRKSC Trigger: ACAGGACTTCCTTCTGTCTCAGATGTCACAGCACCA...AGTTCCAGAAATACTGACTGTTTGCAGATCAGTTATAAGCACAAGGGAGAGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034411.10 ENSMUST00000213788.2 |
||
| CDS-3UTR GCA 90 bp | CATCTCTCCCTTGTGCTTATAACTGATCTGCAAACAGTCAGTATTTCTGGAACTACACCAATGTTCAACTaGAGCTGGATGGACCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HLSLVLITDLQTVSISGTTPMFN*SWMDLL Trigger: GAGCAGGTCCATCCAGCTGCAGTTGAACATTGGTGT...AGTTCCAGAAATACTGACTGTTTGCAGATCAGTTATAAGCACAAGGGAGAGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213788.2 |
||
| CDS-3UTR CCA 90 bp | CATCTCTCCCTTGTGCTTATAACTGATCTGCAAACAGTCAGTATTTCTGGAACTCGAGGGACTTCTTCTTaGAGATCAGCTGCAGCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: HLSLVLITDLQTVSISGTRGTSS*RSAAAF Trigger: AAACGCTGCAGCTGATCTCCAAGAAGAAGTCCCTCG...AGTTCCAGAAATACTGACTGTTTGCAGATCAGTTATAAGCACAAGGGAGAGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR CCA 90 bp | AGACATCTCTCCCTTGTGCTTATAACTGATCTGCAAACAGTCAGTATTTCTGGACTGAACCTCCTTGAATaGTCCTCGGAGATGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RHLSLVLITDLQTVSISGLNLLE*SSEMTP Trigger: TGGAGTCATCTCCGAGGACCATTCAAGGAGGTTCAG...TCCAGAAATACTGACTGTTTGCAGATCAGTTATAAGCACAAGGGAGAGATGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034411.10 ENSMUST00000213788.2 |
||
| CDS-3UTR TCA 90 bp | AGACATCTCTCCCTTGTGCTTATAACTGATCTGCAAACAGTCAGTATTTCTGGATGGTTACGGGGAAACTaGACCATAATCTTGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RHLSLVLITDLQTVSISGWLRGN*TIILLP Trigger: TGGCAGCAAGATTATGGTTCAGTTTCCCCGTAACCA...TCCAGAAATACTGACTGTTTGCAGATCAGTTATAAGCACAAGGGAGAGATGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034411.10 ENSMUST00000213788.2 |
||
| CDS-3UTR GCA 90 bp | GGAAGACATCTCTCCCTTGTGCTTATAACTGATCTGCAAACAGTCAGTATTTCTTCTTCGGAAGGTCTTTaGACTGGTTACGGGGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: GRHLSLVLITDLQTVSISSSEGL*TGYGET Trigger: AGTTTCCCCGTAACCAGTGCAAAGACCTTCCGAAGA...AGAAATACTGACTGTTTGCAGATCAGTTATAAGCACAAGGGAGAGATGTCTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034411.10 ENSMUST00000213788.2 |
||
| CDS-3UTR CCA 90 bp | TCAAATTTCAAGTGGAATGCAAAGGCAGTGACTACTAACAGGGAAAACAGAGACTGGAGCTTGTTTTCCTaGTTCTCAGCCACTGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: SNFKWNAKAVTTNRENRDWSLFS*FSATDL Trigger: CAAGTCAGTGGCTGAGAACCAGGAAAACAAGCTCCA...GTCTCTGTTTTCCCTGTTAGTAGTCACTGCCTTTGCATTCCACTTGAAATTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR CCA 90 bp | GGAAGACATCTCTCCCTTGTGCTTATAACTGATCTGCAAACAGTCAGTATTTCTTTTTGTCTGCCAGTGTaGGGAACCTGGCTTGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: GRHLSLVLITDLQTVSISFCLPV*GTWLGF Trigger: AAATCCAAGCCAGGTTCCCCACACTGGCAGACAAAA...AGAAATACTGACTGTTTGCAGATCAGTTATAAGCACAAGGGAGAGATGTCTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR CCA 90 bp | GTCCCTATTAAATTTTACTCTTTCCCCCTTGCAAACATAATCCACAGCATGAGTTTGCCAAGCTGTCAATaGTTGCAGCAGTTCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VPIKFYSFPLANIIHSMSLPSCQ*LQQFCS Trigger: GGAGCAGAACTGCTGCAACCATTGACAGCTTGGCAA...ACTCATGCTGTGGATTATGTTTGCAAGGGGGAAAGAGTAAAATTTAATAGGGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR CCA 90 bp | TCCCTTGTGCTTATAACTGATCTGCAAACAGTCAGTATTTCTGGAACTTGTTCTCTGAACCTCCTTGAATaGTCCTCGGAGATGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLVLITDLQTVSISGTCSLNLLE*SSEMTP Trigger: TGGAGTCATCTCCGAGGACCATTCAAGGAGGTTCAG...AGAACAAGTTCCAGAAATACTGACTGTTTGCAGATCAGTTATAAGCACAAGGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034411.10 ENSMUST00000213788.2 |
||
| CDS-3UTR CCA 90 bp | GGAAGACATCTCTCCCTTGTGCTTATAACTGATCTGCAAACAGTCAGTATTTCTATGTTCAACTGCAGCTaGATGGACCTGCTCCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GRHLSLVLITDLQTVSISMFNCS*MDLLLR Trigger: TCTAAGGAGCAGGTCCATCCAGCTGCAGTTGAACAT...AGAAATACTGACTGTTTGCAGATCAGTTATAAGCACAAGGGAGAGATGTCTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213788.2 |
||
| CDS-3UTR TCA 90 bp | TCAAATTTCAAGTGGAATGCAAAGGCAGTGACTACTAACAGGGAAAACAGAGACCTCAAGGTCTGTTTATaGAACTCTCTGATCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SNFKWNAKAVTTNRENRDLKVCL*NSLISR Trigger: CCTGCTGATCAGAGAGTTTCATAAACAGACCTTGAG...GTCTCTGTTTTCCCTGTTAGTAGTCACTGCCTTTGCATTCCACTTGAAATTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR GCA 90 bp | TCCCTTGTGCTTATAACTGATCTGCAAACAGTCAGTATTTCTGGAACTTGTTCTTCTTCGGAAGGTCTTTaGACTGGTTACGGGGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: SLVLITDLQTVSISGTCSSSEGL*TGYGET Trigger: AGTTTCCCCGTAACCAGTGCAAAGACCTTCCGAAGA...AGAACAAGTTCCAGAAATACTGACTGTTTGCAGATCAGTTATAAGCACAAGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034411.10 ENSMUST00000213788.2 |
||
| CDS-3UTR GCA 90 bp | CATCTCTCCCTTGTGCTTATAACTGATCTGCAAACAGTCAGTATTTCTGGAACTGCAGCTGGATGGACCTaGTCCTTAGAAAAATATGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLSLVLITDLQTVSISGTAAGWT*SLEKYA Trigger: AGCATATTTTTCTAAGGAGCAGGTCCATCCAGCTGC...AGTTCCAGAAATACTGACTGTTTGCAGATCAGTTATAAGCACAAGGGAGAGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213788.2 |
||
| CDS-3UTR CCA 90 bp | AGTTGTCACACTTGGCACATCTCCTTTATATCTCAACTTGTCAAATTTCAAGTGAAAGGGAGCACTTGCTaGGTGTGGCATCACAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: SCHTWHISFISQLVKFQVKGSTC*VWHHNG Trigger: TCCATTGTGATGCCACACCCAGCAAGTGCTCCCTTT...CACTTGAAATTTGACAAGTTGAGATATAAAGGAGATGTGCCAAGTGTGACAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| 3UTR CAA 72 bp | ACAACTACATCAAGTTTCACTGAGAAGAGCGGTGGATaGTCAATATATGTGATTCTGCATGTGACCACCATC | + |
|
Preference number: 4 (lower is better) Translates to: TTTSSFTEKSGG*SIYVILHVTTI Trigger: GATGGTGGTCACATGCAGAATCACATATATTGACAATCCACCGCTCTTCTCAGTGAAACTTGATGTAGTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR TCA 90 bp | GTCCCTATTAAATTTTACTCTTTCCCCCTTGCAAACATAATCCACAGCATGAGTCGACTTCTTATCATCTaGGGAGTGGCACAGAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VPIKFYSFPLANIIHSMSRLLII*GVAQRN Trigger: ATTTCTCTGTGCCACTCCTCAGATGATAAGAAGTCG...ACTCATGCTGTGGATTATGTTTGCAAGGGGGAAAGAGTAAAATTTAATAGGGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR TCA 90 bp | AGTTGTCACACTTGGCACATCTCCTTTATATCTCAACTTGTCAAATTTCAAGTGTGGTTACGGGGAAACTaGACCATAATCTTGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SCHTWHISFISQLVKFQVWLRGN*TIILLP Trigger: TGGCAGCAAGATTATGGTTCAGTTTCCCCGTAACCA...CACTTGAAATTTGACAAGTTGAGATATAAAGGAGATGTGCCAAGTGTGACAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR GCA 90 bp | AGTTGTCACACTTGGCACATCTCCTTTATATCTCAACTTGTCAAATTTCAAGTGAGGAAAGAGAGAACCTaGACTTCTGTAGCTCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SCHTWHISFISQLVKFQVRKERT*TSVAQV Trigger: GACCTGAGCTACAGAAGTGCAGGTTCTCTCTTTCCT...CACTTGAAATTTGACAAGTTGAGATATAAAGGAGATGTGCCAAGTGTGACAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR GCA 90 bp | TCAAATTTCAAGTGGAATGCAAAGGCAGTGACTACTAACAGGGAAAACAGAGACGGAGATGACTCCACTTaGTGTCTTGTAAAACATCAC | + |
|
Preference number: 4 (lower is better) Translates to: SNFKWNAKAVTTNRENRDGDDST*CLVKHH Trigger: GTGATGTTTTACAAGACAGCAAGTGGAGTCATCTCC...GTCTCTGTTTTCCCTGTTAGTAGTCACTGCCTTTGCATTCCACTTGAAATTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR GCA 90 bp | GGAAGACATCTCTCCCTTGTGCTTATAACTGATCTGCAAACAGTCAGTATTTCTGGAGATGACTCCACTTaGTGTCTTGTAAAACATCAC | + |
|
Preference number: 4 (lower is better) Translates to: GRHLSLVLITDLQTVSISGDDST*CLVKHH Trigger: GTGATGTTTTACAAGACAGCAAGTGGAGTCATCTCC...AGAAATACTGACTGTTTGCAGATCAGTTATAAGCACAAGGGAGAGATGTCTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034411.10 ENSMUST00000213788.2 |
||
| CDS-3UTR CCA 90 bp | AGTTGTCACACTTGGCACATCTCCTTTATATCTCAACTTGTCAAATTTCAAGTGTTTGTGGACTCTGTTTaGGAGGAAGAGCATCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SCHTWHISFISQLVKFQVFVDSV*EEEHPE Trigger: CTCAGGATGCTCTTCCTCCCAAACAGAGTCCACAAA...CACTTGAAATTTGACAAGTTGAGATATAAAGGAGATGTGCCAAGTGTGACAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR CCA 90 bp | TCCCTTGTGCTTATAACTGATCTGCAAACAGTCAGTATTTCTGGAACTTGTTCTGAATTGAAGTCTCGCTaGAGCTTGTTTTCCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLVLITDLQTVSISGTCSELKSR*SLFSWF Trigger: GAACCAGGAAAACAAGCTCCAGCGAGACTTCAATTC...AGAACAAGTTCCAGAAATACTGACTGTTTGCAGATCAGTTATAAGCACAAGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR CCA 90 bp | GTCCCTATTAAATTTTACTCTTTCCCCCTTGCAAACATAATCCACAGCATGAGTAGTGGCACAGAGAAATaGACAACTGCAAGCTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VPIKFYSFPLANIIHSMSSGTEK*TTASLE Trigger: TTCCAAGCTTGCAGTTGTCCATTTCTCTGTGCCACT...ACTCATGCTGTGGATTATGTTTGCAAGGGGGAAAGAGTAAAATTTAATAGGGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR CCA 90 bp | GGAAGACATCTCTCCCTTGTGCTTATAACTGATCTGCAAACAGTCAGTATTTCTTTATCATCTGAGGAGTaGCACAGAGAAATGGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: GRHLSLVLITDLQTVSISLSSEE*HREMDN Trigger: GTTGTCCATTTCTCTGTGCCACTCCTCAGATGATAA...AGAAATACTGACTGTTTGCAGATCAGTTATAAGCACAAGGGAGAGATGTCTTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR CCA 90 bp | TCAAATTTCAAGTGGAATGCAAAGGCAGTGACTACTAACAGGGAAAACAGAGACGGTGTGGCATCACAATaGAACTCAAGGTCTGTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SNFKWNAKAVTTNRENRDGVASQ*NSRSVY Trigger: ATAAACAGACCTTGAGTTCCATTGTGATGCCACACC...GTCTCTGTTTTCCCTGTTAGTAGTCACTGCCTTTGCATTCCACTTGAAATTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR GCA 90 bp | AGACATCTCTCCCTTGTGCTTATAACTGATCTGCAAACAGTCAGTATTTCTGGATTCCCGGGAGAGCTGTaGAAAAATTTCTTTACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RHLSLVLITDLQTVSISGFPGEL*KNFFTK Trigger: CTTTGTAAAGAAATTTTTGCACAGCTCTCCCGGGAA...TCCAGAAATACTGACTGTTTGCAGATCAGTTATAAGCACAAGGGAGAGATGTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR GCA 90 bp | AGACATCTCTCCCTTGTGCTTATAACTGATCTGCAAACAGTCAGTATTTCTGGATGGTTGCAGCAGTTCTaGTCCTTAGAAAAATATGCT | + |
|
Preference number: 4 (lower is better) Translates to: RHLSLVLITDLQTVSISGWLQQF*SLEKYA Trigger: AGCATATTTTTCTAAGGAGCAGAACTGCTGCAACCA...TCCAGAAATACTGACTGTTTGCAGATCAGTTATAAGCACAAGGGAGAGATGTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| 3UTR CAA 72 bp | GTTGTCACACTTGGCACATCTCCTTTATATCTCAACTaGTCAAATTTCAAGTGGAATGCAAAGGCAGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: VVTLGTSPLYLN*SNFKWNAKAVT Trigger: AGTCACTGCCTTTGCATTCCACTTGAAATTTGACAAGTTGAGATATAAAGGAGATGTGCCAAGTGTGACAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| 3UTR CAA 72 bp | ATGTGTCTCAGCATTCCCTCACTTCATGCTTCATGTTaGTCCCTATTAAATTTTACTCTTTCCCCCTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: MCLSIPSLHASC*SLLNFTLSPLQ Trigger: TTGCAAGGGGGAAAGAGTAAAATTTAATAGGGACAAACATGAAGCATGAAGTGAGGGAATGCTGAGACACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS GCA 90 bp | GGCTGCAGGTACGTCTCGGTGCCATCAAGGCCCACCTCCTGCACCTaGTTCTCGCAGGCCGACTCGATGCTGATGCGCACGGCTCGCACG | + |
|
Preference number: 5 (lower is better) Translates to: GCRYVSVPSRPTSCT*FSQADSMLMRTART Trigger: CGTGCGAGCCGTGCGCATCAGCATCGAGTCGGCCTGCGAGAAGCAGGTGCAGGAGGTGGGCCTTGATGGCACCGAGACGTACCTGCAGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034411.10 ENSMUST00000216406.2 |
||
| CDS GCA 90 bp | ATGCGCTGTGCCAGGCGCGCCAGGTTCTGCGACATGGACAGCGGCTaGAGGTACGTCTCGGTGCCATCAAGGCCCACCTCCTGCACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: MRCARRARFCDMDSG*RYVSVPSRPTSCTC Trigger: GCAGGTGCAGGAGGTGGGCCTTGATGGCACCGAGACGTACCTGCAGCCGCTGTCCATGTCGCAGAACCTGGCGCGCCTGGCACAGCGCAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034411.10 ENSMUST00000216406.2 |
||
| CDS GCA 90 bp | GACAGCGGCTGCAGGTACGTCTCGGTGCCATCAAGGCCCACCTCCTaGACCTGCTTCTCGCAGGCCGACTCGATGCTGATGCGCACGGCT | + |
|
Preference number: 5 (lower is better) Translates to: DSGCRYVSVPSRPTS*TCFSQADSMLMRTA Trigger: AGCCGTGCGCATCAGCATCGAGTCGGCCTGCGAGAAGCAGGTGCAGGAGGTGGGCCTTGATGGCACCGAGACGTACCTGCAGCCGCTGTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034411.10 ENSMUST00000216406.2 |
||
| CDS CCA 90 bp | TGCTCCAGCGAGGGACTTCTTCTTGGAGATCAGCTGCAGCGTTTGTaGACTCTGTTTGGGAGGAAGAGCATCCTGAGAGACGGGGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CSSEGLLLGDQLQRL*TLFGRKSILRDGVQ Trigger: CTGGACCCCGTCTCTCAGGATGCTCTTCCTCCCAAACAGAGTCCACAAACGCTGCAGCTGATCTCCAAGAAGAAGTCCCTCGCTGGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS TCA 90 bp | TCAGCCACTGACTTGGTCAGTCTTTCTGCCCCCTTCAGTAGGATCTaGGCTGCTCCAGCGAGGGACTTCTTCTTGGAGATCAGCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SATDLVSLSAPFSRI*AAPARDFFLEISCS Trigger: GCTGCAGCTGATCTCCAAGAAGAAGTCCCTCGCTGGAGCAGCTCAGATCCTACTGAAGGGGGCAGAAAGACTGACCAAGTCAGTGGCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS TCA 90 bp | CGTTACGAACTGAAATCGCATAGTCTCCACTTGGCGAGGCCACGGTaGTGGCCGAAGCATTGCCAATGCTCTCTATGGGCCCAAGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RYELKSHSLHLARPR*WPKHCQCSLWAQVP Trigger: TGGGACTTGGGCCCATAGAGAGCATTGGCAATGCTTCGGCCATCACCGTGGCCTCGCCAAGTGGAGACTATGCGATTTCAGTTCGTAACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034411.10 ENSMUST00000213788.2 |
||
| CDS CCA 90 bp | CTTCGCAAATTGTTCCTCACAGAGTCCCAAGGCCACAAAGAAGGTTaGAATTTTACCAACCCCTCCTCGTCGTCCTGGTCGGCTCCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: LRKLFLTESQGHKEG*NFTNPSSSSWSAPA Trigger: CGCGGGAGCCGACCAGGACGACGAGGAGGGGTTGGTAAAATTCCAACCTTCTTTGTGGCCTTGGGACTCTGTGAGGAACAATTTGCGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR CAA 90 bp | GAATCTGGGTGCTCATGCATGCTAGGCAAGCACCCTCCCACTGGGCTCCACCTCGAACCTGGCTTGGATTaGGGCAAAGGTCTCTTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: ESGCSCMLGKHPPTGLHLEPGLD*GKGLLK Trigger: TTTTAAGAGACCTTTGCCCAAATCCAAGCCAGGTTC...GAGGTGGAGCCCAGTGGGAGGGTGCTTGCCTAGCATGCATGAGCACCCAGATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR CAA 90 bp | GGAACATGTCTCAGATGCAGTTGCCTAGAGTGGTACCAGGGCAGTGAAGGCTCATGTGGGGAACCTGGCTaGGATTTGGGCAAAGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GTCLRCSCLEWYQGSEGSCGEPG*DLGKGL Trigger: GAGACCTTTGCCCAAATCCAAGCCAGGTTCCCCACA...TGAGCCTTCACTGCCCTGGTACCACTCTAGGCAACTGCATCTGAGACATGTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS TCA 90 bp | GAGACAGAAGGAAGTCCTGTAGCTCCTGCTCCTGATGAGACAACATaGTTACCCGACCATCTCTGTGCACAACACGGACCTGCTCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: ETEGSPVAPAPDETT*LPDHLCAQHGPAPH Trigger: GTGTGGAGCAGGTCCGTGTTGTGCACAGAGATGGTCGGGTAATCATGTTGTCTCATCAGGAGCAGGAGCTACAGGACTTCCTTCTGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034411.10 ENSMUST00000213788.2 |
||
| CDS TCA 90 bp | AAACTGAACCATAATCTTGCTGCCACTCTCAGGTCCGTTACGAACTaGAATCGCATAGTCTCCACTTGGCGAGGCCACGGTGATGGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: KLNHNLAATLRSVTN*NRIVSTWRGHGDGR Trigger: TCGGCCATCACCGTGGCCTCGCCAAGTGGAGACTATGCGATTTCAGTTCGTAACGGACCTGAGAGTGGCAGCAAGATTATGGTTCAGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034411.10 ENSMUST00000213788.2 |
||
| CDS-3UTR CAA 90 bp | AGTACACATTCCAACCATCACCCCCAATGCCCTTTCCTCCCTCTAAGTCTGGAGAAGTCTCGCTGGAGCTaGTTTTCCTGGTTCTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: STHSNHHPQCPFLPLSLEKSRWS*FSWFSA Trigger: GGCTGAGAACCAGGAAAACAAGCTCCAGCGAGACTT...CTCCAGACTTAGAGGGAGGAAAGGGCATTGGGGGTGATGGTTGGAATGTGTACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS CCA 90 bp | AGTCTCAGGAGCTCAGAATTGAAGTCTCGCTGGAGCTTGTTTTCCTaGTTCTCAGCCACTGACTTGGTCAGTCTTTCTGCCCCCTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SLRSSELKSRWSLFS*FSATDLVSLSAPFS Trigger: ACTGAAGGGGGCAGAAAGACTGACCAAGTCAGTGGCTGAGAACCAGGAAAACAAGCTCCAGCGAGACTTCAATTCTGAGCTCCTGAGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS CCA 90 bp | CTAGACTCATACACATCATTGATGTTTGACCAGTGGGCCTGGATCTaGGGGTCCTCAATGCGACTTGCCAAGCTGTCAATGGTTGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LDSYTSLMFDQWAWI*GSSMRLAKLSMVAA Trigger: TGCTGCAACCATTGACAGCTTGGCAAGTCGCATTGAGGACCCCCAGATCCAGGCCCACTGGTCAAACATCAATGATGTGTATGAGTCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR CAA 90 bp | CATGACCTGGCTGTTTTTCCTCATGTGTCTCAGCATTCCCTCACTTCATGCTTCGCGAGGGACTTCTTCTaGGAGATCAGCTGCAGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: HDLAVFPHVSQHSLTSCFARDFF*EISCSV Trigger: AACGCTGCAGCTGATCTCCAAGAAGAAGTCCCTCGC...GAAGCATGAAGTGAGGGAATGCTGAGACACATGAGGAAAAACAGCCAGGTCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR CAA 90 bp | AGTACACATTCCAACCATCACCCCCAATGCCCTTTCCTCCCTCTAAGTCTGGAGCCAAGCTGTCAATGGTaGCAGCAGTTCTGCTCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: STHSNHHPQCPFLPLSLEPSCQW*QQFCSL Trigger: TAAGGAGCAGAACTGCTGCAACCATTGACAGCTTGG...CTCCAGACTTAGAGGGAGGAAAGGGCATTGGGGGTGATGGTTGGAATGTGTACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR CAA 90 bp | ACAGAGACTGTGTTATGGGACGTCCTTTGGTTCCCTCTGCCTTTGACCTGTTCAGGTCCTCAATGCGACTaGCCAAGCTGTCAATGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: TETVLWDVLWFPLPLTCSGPQCD*PSCQWL Trigger: CAACCATTGACAGCTTGGCAAGTCGCATTGAGGACC...TGAACAGGTCAAAGGCAGAGGGAACCAAAGGACGTCCCATAACACAGTCTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS TCA 90 bp | GGTGTGGCATCACAATGGAACTCAAGGTCTGTTTATGAAACTCTCTaGTCAGCAGGTGCAGGTTGTGCTCCAGGACGTAGAGGTGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: GVASQWNSRSVYETL*SAGAGCAPGRRGDP Trigger: AGGATCACCTCTACGTCCTGGAGCACAACCTGCACCTGCTGATCAGAGAGTTTCATAAACAGACCTTGAGTTCCATTGTGATGCCACACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS CCA 90 bp | TTTACACTAGACTCATACACATCATTGATGTTTGACCAGTGGGCCTaGATCTGGGGGTCCTCAATGCGACTTGCCAAGCTGTCAATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: FTLDSYTSLMFDQWA*IWGSSMRLAKLSMV Trigger: AACCATTGACAGCTTGGCAAGTCGCATTGAGGACCCCCAGATCCAGGCCCACTGGTCAAACATCAATGATGTGTATGAGTCTAGTGTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR CAA 90 bp | ATTGCTGTGAAGAGACACCATGACCAGAGCAACTCCTACAAAGCAAAACATCTATTCTCAGCCACTGACTaGGTCAGTCTTTCTGCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: IAVKRHHDQSNSYKAKHLFSATD*VSLSAP Trigger: GGGGGCAGAAAGACTGACCAAGTCAGTGGCTGAGAA...TAGATGTTTTGCTTTGTAGGAGTTGCTCTGGTCATGGTGTCTCTTCACAGCAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS TCA 90 bp | AAAACATCACTCTTCGGAAGGTCTTTGCACTGGTTACGGGGAAACTaGACCATAATCTTGCTGCCACTCTCAGGTCCGTTACGAACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: KTSLFGRSLHWLRGN*TIILLPLSGPLRTE Trigger: TTCAGTTCGTAACGGACCTGAGAGTGGCAGCAAGATTATGGTTCAGTTTCCCCGTAACCAGTGCAAAGACCTTCCGAAGAGTGATGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034411.10 ENSMUST00000213788.2 |
||
| CDS GCA 90 bp | ATTCTTTATCACTTCAAAGGTACCATGATGAGGAAAGAGAGAACCTaGACTTCTGTAGCTCAGGTCACCCAGGATCTTGTCGCCCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: ILYHFKGTMMRKERT*TSVAQVTQDLVAHL Trigger: AAGGTGGGCGACAAGATCCTGGGTGACCTGAGCTACAGAAGTGCAGGTTCTCTCTTTCCTCATCATGGTACCTTTGAAGTGATAAAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS CCA 90 bp | CTGTGCACAACACGGACCTGCTCCACACCAATGTTCAACTGCAGCTaGATGGACCTGCTCCTTAGAAAAATATGCTTTGCCTGTTTAATT | + |
|
Preference number: 5 (lower is better) Translates to: LCTTRTCSTPMFNCS*MDLLLRKICFACLI Trigger: AATTAAACAGGCAAAGCATATTTTTCTAAGGAGCAGGTCCATCCAGCTGCAGTTGAACATTGGTGTGGAGCAGGTCCGTGTTGTGCACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213788.2 |
||
| CDS-3UTR CAA 90 bp | AGACATCTCTCCCTTGTGCTTATAACTGATCTGCAAACAGTCAGTATTTCTGGAGATCAGCTGCAGCGTTaGTGGACTCTGTTTGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RHLSLVLITDLQTVSISGDQLQR*WTLFGR Trigger: CCTCCCAAACAGAGTCCACAAACGCTGCAGCTGATC...TCCAGAAATACTGACTGTTTGCAGATCAGTTATAAGCACAAGGGAGAGATGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR CAA 90 bp | AGACATCTCTCCCTTGTGCTTATAACTGATCTGCAAACAGTCAGTATTTCTGGAGTGATGGCCGAAGCATaGCCAATGCTCTCTATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RHLSLVLITDLQTVSISGVMAEA*PMLSMG Trigger: GCCCATAGAGAGCATTGGCAATGCTTCGGCCATCAC...TCCAGAAATACTGACTGTTTGCAGATCAGTTATAAGCACAAGGGAGAGATGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034411.10 ENSMUST00000213788.2 |
||
| CDS-3UTR CAA 90 bp | GTCCCTATTAAATTTTACTCTTTCCCCCTTGCAAACATAATCCACAGCATGAGTGTGATGGCCGAAGCATaGCCAATGCTCTCTATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VPIKFYSFPLANIIHSMSVMAEA*PMLSMG Trigger: GCCCATAGAGAGCATTGGCAATGCTTCGGCCATCAC...ACTCATGCTGTGGATTATGTTTGCAAGGGGGAAAGAGTAAAATTTAATAGGGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS TCA 90 bp | TATAAACGAAGTTTCGGCCTTCCATCTTGTTCCACTGAACCTCCTTaGATGGTCCTCGGAGATGACTCCACTTGCTGTCTTGTAAAACAT | + |
|
Preference number: 5 (lower is better) Translates to: YKRSFGLPSCSTEPP*MVLGDDSTCCLVKH Trigger: ATGTTTTACAAGACAGCAAGTGGAGTCATCTCCGAGGACCATTCAAGGAGGTTCAGTGGAACAAGATGGAAGGCCGAAACTTCGTTTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034411.10 ENSMUST00000213788.2 |
||
| CDS-3UTR CAA 90 bp | ATTGCTGTGAAGAGACACCATGACCAGAGCAACTCCTACAAAGCAAAACATCTAAGGCCACAAAGAAGGTaGGAATTTTACCAACCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: IAVKRHHDQSNSYKAKHLRPQRR*EFYQPL Trigger: GAGGGGTTGGTAAAATTCCAACCTTCTTTGTGGCCT...TAGATGTTTTGCTTTGTAGGAGTTGCTCTGGTCATGGTGTCTCTTCACAGCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS-3UTR CAA 90 bp | AGACATCTCTCCCTTGTGCTTATAACTGATCTGCAAACAGTCAGTATTTCTGGAAGGGCACTTCGCAAATaGTTCCTCACAGAGTCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: RHLSLVLITDLQTVSISGRALRK*FLTESQ Trigger: TTGGGACTCTGTGAGGAACAATTTGCGAAGTGCCCT...TCCAGAAATACTGACTGTTTGCAGATCAGTTATAAGCACAAGGGAGAGATGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS GCA 72 bp | GCCAGGCGCGCCAGGTTCTGCGACATGGACAGCGGCTaGAGGTACGTCTCGGTGCCATCAAGGCCCACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ARRARFCDMDSG*RYVSVPSRPTS Trigger: GGAGGTGGGCCTTGATGGCACCGAGACGTACCTGCAGCCGCTGTCCATGTCGCAGAACCTGGCGCGCCTGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034411.10 ENSMUST00000216406.2 |
||
| CDS GCA 72 bp | CTCAGAGCCAGAGCCCTGGCTGAAGTCGATGCGCTGTaGCAGGCGCGCCAGGTTCTGCGACATGGACAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: LRARALAEVDAL*QARQVLRHGQR Trigger: CCGCTGTCCATGTCGCAGAACCTGGCGCGCCTGGCACAGCGCATCGACTTCAGCCAGGGCTCTGGCTCTGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034411.10 ENSMUST00000216406.2 |
||
| CDS CCA 72 bp | CGATGCGCTGTGCCAGGCGCGCCAGGTTCTGCGACATaGACAGCGGCTGCAGGTACGTCTCGGTGCCATCAA | + |
|
Preference number: 6 (lower is better) Translates to: RCAVPGAPGSAT*TAAAGTSRCHQ Trigger: TTGATGGCACCGAGACGTACCTGCAGCCGCTGTCCATGTCGCAGAACCTGGCGCGCCTGGCACAGCGCATCG 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034411.10 ENSMUST00000216406.2 |
||
| CDS GCA 72 bp | TACGTCTCGGTGCCATCAAGGCCCACCTCCTGCACCTaGTTCTCGCAGGCCGACTCGATGCTGATGCGCACG | + |
|
Preference number: 6 (lower is better) Translates to: YVSVPSRPTSCT*FSQADSMLMRT Trigger: CGTGCGCATCAGCATCGAGTCGGCCTGCGAGAAGCAGGTGCAGGAGGTGGGCCTTGATGGCACCGAGACGTA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034411.10 ENSMUST00000216406.2 |
||
| CDS GCA 72 bp | TGCAGGTACGTCTCGGTGCCATCAAGGCCCACCTCCTaGACCTGCTTCTCGCAGGCCGACTCGATGCTGATG | + |
|
Preference number: 6 (lower is better) Translates to: CRYVSVPSRPTS*TCFSQADSMLM Trigger: CATCAGCATCGAGTCGGCCTGCGAGAAGCAGGTGCAGGAGGTGGGCCTTGATGGCACCGAGACGTACCTGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034411.10 ENSMUST00000216406.2 |
||
| CDS CAA 72 bp | TCTCCACTTGGCGAGGCCACGGTGATGGCCGAAGCATaGCCAATGCTCTCTATGGGCCCAAGTCCCACATGG | + |
|
Preference number: 6 (lower is better) Translates to: SPLGEATVMAEA*PMLSMGPSPTW Trigger: CCATGTGGGACTTGGGCCCATAGAGAGCATTGGCAATGCTTCGGCCATCACCGTGGCCTCGCCAAGTGGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034411.10 ENSMUST00000213788.2 |
||
| CDS GCA 72 bp | CCAGTGGGCCTGGATCTGGGGGTCCTCAATGCGACTTaGCAAGCTGTCAATGGTTGCAGCAGTTCTGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PVGLDLGVLNAT*QAVNGCSSSAP Trigger: AGGAGCAGAACTGCTGCAACCATTGACAGCTTGGCAAGTCGCATTGAGGACCCCCAGATCCAGGCCCACTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS CAA 72 bp | GTGCAGGTTGTGCTCCAGGACGTAGAGGTGATCCTCTaGCCCAGGCTTCTCTGCGGCACACTTCTGCGACTT | + |
|
Preference number: 6 (lower is better) Translates to: VQVVLQDVEVIL*PRLLCGTLLRL Trigger: AAGTCGCAGAAGTGTGCCGCAGAGAAGCCTGGGCAAGAGGATCACCTCTACGTCCTGGAGCACAACCTGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS CAA 72 bp | ACCAGTGGGCCTGGATCTGGGGGTCCTCAATGCGACTaGCCAAGCTGTCAATGGTTGCAGCAGTTCTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TSGPGSGGPQCD*PSCQWLQQFCS Trigger: GGAGCAGAACTGCTGCAACCATTGACAGCTTGGCAAGTCGCATTGAGGACCCCCAGATCCAGGCCCACTGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS TCA 72 bp | CTGAAATCGCATAGTCTCCACTTGGCGAGGCCACGGTaGTGGCCGAAGCATTGCCAATGCTCTCTATGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LKSHSLHLARPR*WPKHCQCSLWA Trigger: GGCCCATAGAGAGCATTGGCAATGCTTCGGCCATCACCGTGGCCTCGCCAAGTGGAGACTATGCGATTTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034411.10 ENSMUST00000213788.2 |
||
| CDS GCA 72 bp | AGGATCTTGTCGCCCACCTTCCTCAGCTTCCAGTGCTaGCGGAGTCTCAGGAGCTCAGAATTGAAGTCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: RILSPTFLSFQC*RSLRSSELKSR Trigger: GCGAGACTTCAATTCTGAGCTCCTGAGACTCCGGCAGCACTGGAAGCTGAGGAAGGTGGGCGACAAGATCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS GCA 72 bp | CCCAGGATCTTGTCGCCCACCTTCCTCAGCTTCCAGTaGTGCCGGAGTCTCAGGAGCTCAGAATTGAAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: PRILSPTFLSFQ*CRSLRSSELKS Trigger: AGACTTCAATTCTGAGCTCCTGAGACTCCGGCAGCACTGGAAGCTGAGGAAGGTGGGCGACAAGATCCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS CAA 90 bp | GATCAGCAGGTGCAGGTTGTGCTCCAGGACGTAGAGGTGATCCTCTaGCCCAGGCTTCTCTGCGGCACACTTCTGCGACTTCTTATCATC | + |
|
Preference number: 6 (lower is better) Translates to: DQQVQVVLQDVEVIL*PRLLCGTLLRLLII Trigger: GATGATAAGAAGTCGCAGAAGTGTGCCGCAGAGAAGCCTGGGCAAGAGGATCACCTCTACGTCCTGGAGCACAACCTGCACCTGCTGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS GCA 72 bp | GCTGCTCCAGCGAGGGACTTCTTCTTGGAGATCAGCTaGAGCGTTTGTGGACTCTGTTTGGGAGGAAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: AAPARDFFLEIS*SVCGLCLGGRA Trigger: TGCTCTTCCTCCCAAACAGAGTCCACAAACGCTGCAGCTGATCTCCAAGAAGAAGTCCCTCGCTGGAGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS GCA 72 bp | TGTTTGACCAGTGGGCCTGGATCTGGGGGTCCTCAATaGGACTTGCCAAGCTGTCAATGGTTGCAGCAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: CLTSGPGSGGPQ*DLPSCQWLQQF Trigger: GAACTGCTGCAACCATTGACAGCTTGGCAAGTCGCATTGAGGACCCCCAGATCCAGGCCCACTGGTCAAACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS CAA 90 bp | ACTTCGCAAATTGTTCCTCACAGAGTCCCAAGGCCACAAAGAAGGTaGGAATTTTACCAACCCCTCCTCGTCGTCCTGGTCGGCTCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: TSQIVPHRVPRPQRR*EFYQPLLVVLVGSR Trigger: GCGGGAGCCGACCAGGACGACGAGGAGGGGTTGGTAAAATTCCAACCTTCTTTGTGGCCTTGGGACTCTGTGAGGAACAATTTGCGAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS TCA 72 bp | GACTTGGTCAGTCTTTCTGCCCCCTTCAGTAGGATCTaGGCTGCTCCAGCGAGGGACTTCTTCTTGGAGATC | + |
|
Preference number: 6 (lower is better) Translates to: DLVSLSAPFSRI*AAPARDFFLEI Trigger: GATCTCCAAGAAGAAGTCCCTCGCTGGAGCAGCTCAGATCCTACTGAAGGGGGCAGAAAGACTGACCAAGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS TCA 72 bp | GGAAGTCCTGTAGCTCCTGCTCCTGATGAGACAACATaGTTACCCGACCATCTCTGTGCACAACACGGACCT | + |
|
Preference number: 6 (lower is better) Translates to: GSPVAPAPDETT*LPDHLCAQHGP Trigger: AGGTCCGTGTTGTGCACAGAGATGGTCGGGTAATCATGTTGTCTCATCAGGAGCAGGAGCTACAGGACTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034411.10 ENSMUST00000213788.2 |
||
| CDS TCA 72 bp | CATAATCTTGCTGCCACTCTCAGGTCCGTTACGAACTaGAATCGCATAGTCTCCACTTGGCGAGGCCACGGT | + |
|
Preference number: 6 (lower is better) Translates to: HNLAATLRSVTN*NRIVSTWRGHG Trigger: ACCGTGGCCTCGCCAAGTGGAGACTATGCGATTTCAGTTCGTAACGGACCTGAGAGTGGCAGCAAGATTATG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034411.10 ENSMUST00000213788.2 |
||
| CDS CCA 72 bp | TTGTTCCTCACAGAGTCCCAAGGCCACAAAGAAGGTTaGAATTTTACCAACCCCTCCTCGTCGTCCTGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: LFLTESQGHKEG*NFTNPSSSSWS Trigger: CGACCAGGACGACGAGGAGGGGTTGGTAAAATTCCAACCTTCTTTGTGGCCTTGGGACTCTGTGAGGAACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS CCA 72 bp | GAGGGACTTCTTCTTGGAGATCAGCTGCAGCGTTTGTaGACTCTGTTTGGGAGGAAGAGCATCCTGAGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: EGLLLGDQLQRL*TLFGRKSILRD Trigger: GTCTCTCAGGATGCTCTTCCTCCCAAACAGAGTCCACAAACGCTGCAGCTGATCTCCAAGAAGAAGTCCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS CCA 72 bp | GCTGGAGCTTGTTTTCCTGGTTCTCAGCCACTGACTTaGTCAGTCTTTCTGCCCCCTTCAGTAGGATCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: AGACFPGSQPLT*SVFLPPSVGSE Trigger: CTCAGATCCTACTGAAGGGGGCAGAAAGACTGACCAAGTCAGTGGCTGAGAACCAGGAAAACAAGCTCCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS CCA 72 bp | GACTCATACACATCATTGATGTTTGACCAGTGGGCCTaGATCTGGGGGTCCTCAATGCGACTTGCCAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: DSYTSLMFDQWA*IWGSSMRLAKL Trigger: CAGCTTGGCAAGTCGCATTGAGGACCCCCAGATCCAGGCCCACTGGTCAAACATCAATGATGTGTATGAGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS CAA 72 bp | AGCGAGGGACTTCTTCTTGGAGATCAGCTGCAGCGTTaGTGGACTCTGTTTGGGAGGAAGAGCATCCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SEGLLLGDQLQR*WTLFGRKSILR Trigger: TCTCAGGATGCTCTTCCTCCCAAACAGAGTCCACAAACGCTGCAGCTGATCTCCAAGAAGAAGTCCCTCGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS CAA 72 bp | CTGAGAGTCTCATCCTCTTGTGGCCAAAGGGAGCACTaGCTGGGTGTGGCATCACAATGGAACTCAAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LRVSSSCGQREH*LGVASQWNSRS Trigger: AGACCTTGAGTTCCATTGTGATGCCACACCCAGCAAGTGCTCCCTTTGGCCACAAGAGGATGAGACTCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS TCA 72 bp | AGCGTTTGTGGACTCTGTTTGGGAGGAAGAGCATCCTaGGAGACGGGGTCCAGAGTCATGAACTTTTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SVCGLCLGGRAS*ETGSRVMNFLS Trigger: GGACAAAAAGTTCATGACTCTGGACCCCGTCTCTCAGGATGCTCTTCCTCCCAAACAGAGTCCACAAACGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS CCA 72 bp | GAGTCTCATCCTCTTGTGGCCAAAGGGAGCACTTGCTaGGTGTGGCATCACAATGGAACTCAAGGTCTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: ESHPLVAKGSTC*VWHHNGTQGLF Trigger: AAACAGACCTTGAGTTCCATTGTGATGCCACACCCAGCAAGTGCTCCCTTTGGCCACAAGAGGATGAGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS CCA 72 bp | TACACATCATTGATGTTTGACCAGTGGGCCTGGATCTaGGGGTCCTCAATGCGACTTGCCAAGCTGTCAATG | + |
|
Preference number: 6 (lower is better) Translates to: YTSLMFDQWAWI*GSSMRLAKLSM Trigger: CATTGACAGCTTGGCAAGTCGCATTGAGGACCCCCAGATCCAGGCCCACTGGTCAAACATCAATGATGTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS CCA 72 bp | ACACTAGACTCATACACATCATTGATGTTTGACCAGTaGGCCTGGATCTGGGGGTCCTCAATGCGACTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: TLDSYTSLMFDQ*AWIWGSSMRLA Trigger: GGCAAGTCGCATTGAGGACCCCCAGATCCAGGCCCACTGGTCAAACATCAATGATGTGTATGAGTCTAGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS CAA 72 bp | ATTGTTCCTCACAGAGTCCCAAGGCCACAAAGAAGGTaGGAATTTTACCAACCCCTCCTCGTCGTCCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: IVPHRVPRPQRR*EFYQPLLVVLV Trigger: GACCAGGACGACGAGGAGGGGTTGGTAAAATTCCAACCTTCTTTGTGGCCTTGGGACTCTGTGAGGAACAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS CAA 90 bp | CTTGAGGACCTGAGAGTCTCATCCTCTTGTGGCCAAAGGGAGCACTaGCTGGGTGTGGCATCACAATGGAACTCAAGGTCTGTTTATGAA | + |
|
Preference number: 6 (lower is better) Translates to: LEDLRVSSSCGQREH*LGVASQWNSRSVYE Trigger: TTCATAAACAGACCTTGAGTTCCATTGTGATGCCACACCCAGCAAGTGCTCCCTTTGGCCACAAGAGGATGAGACTCTCAGGTCCTCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS TCA 72 bp | CTTCTCTGCGGCACACTTCTGCGACTTCTTATCATCTaGGGAGTGGCACAGAGAAATGGACAACTGCAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LLCGTLLRLLII*GVAQRNGQLQA Trigger: AGCTTGCAGTTGTCCATTTCTCTGTGCCACTCCTCAGATGATAAGAAGTCGCAGAAGTGTGCCGCAGAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS TCA 72 bp | CTCTTCGGAAGGTCTTTGCACTGGTTACGGGGAAACTaGACCATAATCTTGCTGCCACTCTCAGGTCCGTTA | + |
|
Preference number: 6 (lower is better) Translates to: LFGRSLHWLRGN*TIILLPLSGPL Trigger: TAACGGACCTGAGAGTGGCAGCAAGATTATGGTTCAGTTTCCCCGTAACCAGTGCAAAGACCTTCCGAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034411.10 ENSMUST00000213788.2 |
||
| CDS TCA 72 bp | AGTTTCGGCCTTCCATCTTGTTCCACTGAACCTCCTTaGATGGTCCTCGGAGATGACTCCACTTGCTGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SFGLPSCSTEPP*MVLGDDSTCCL Trigger: AAGACAGCAAGTGGAGTCATCTCCGAGGACCATTCAAGGAGGTTCAGTGGAACAAGATGGAAGGCCGAAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034411.10 ENSMUST00000213788.2 |
||
| CDS GCA 72 bp | TGCACAACACGGACCTGCTCCACACCAATGTTCAACTaGAGCTGGATGGACCTGCTCCTTAGAAAAATATGC | + |
|
Preference number: 6 (lower is better) Translates to: CTTRTCSTPMFN*SWMDLLLRKIC Trigger: GCATATTTTTCTAAGGAGCAGGTCCATCCAGCTGCAGTTGAACATTGGTGTGGAGCAGGTCCGTGTTGTGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213788.2 |
||
| CDS CCA 72 bp | GCGGCACACTTCTGCGACTTCTTATCATCTGAGGAGTaGCACAGAGAAATGGACAACTGCAAGCTTGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: AAHFCDFLSSEE*HREMDNCKLGK Trigger: CTTTCCAAGCTTGCAGTTGTCCATTTCTCTGTGCCACTCCTCAGATGATAAGAAGTCGCAGAAGTGTGCCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS CCA 72 bp | ACACGGACCTGCTCCACACCAATGTTCAACTGCAGCTaGATGGACCTGCTCCTTAGAAAAATATGCTTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: TRTCSTPMFNCS*MDLLLRKICFA Trigger: GGCAAAGCATATTTTTCTAAGGAGCAGGTCCATCCAGCTGCAGTTGAACATTGGTGTGGAGCAGGTCCGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213788.2 |
||
| CDS GCA 72 bp | CACTTCAAAGGTACCATGATGAGGAAAGAGAGAACCTaGACTTCTGTAGCTCAGGTCACCCAGGATCTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: HFKGTMMRKERT*TSVAQVTQDLV Trigger: GACAAGATCCTGGGTGACCTGAGCTACAGAAGTGCAGGTTCTCTCTTTCCTCATCATGGTACCTTTGAAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS CCA 72 bp | CATCCTCTTGTGGCCAAAGGGAGCACTTGCTGGGTGTaGCATCACAATGGAACTCAAGGTCTGTTTATGAAA | + |
|
Preference number: 6 (lower is better) Translates to: HPLVAKGSTCWV*HHNGTQGLFMK Trigger: TTTCATAAACAGACCTTGAGTTCCATTGTGATGCCACACCCAGCAAGTGCTCCCTTTGGCCACAAGAGGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
||
| CDS CCA 72 bp | TCTGGGGGTCCTCAATGCGACTTGCCAAGCTGTCAATaGTTGCAGCAGTTCTGCTCCTTAGAAAAATATGCT | + |
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Preference number: 6 (lower is better) Translates to: SGGPQCDLPSCQ*LQQFCSLEKYA Trigger: AGCATATTTTTCTAAGGAGCAGAACTGCTGCAACCATTGACAGCTTGGCAAGTCGCATTGAGGACCCCCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| CDS TCA 72 bp | TCACAATGGAACTCAAGGTCTGTTTATGAAACTCTCTaGTCAGCAGGTGCAGGTTGTGCTCCAGGACGTAGA | + |
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Preference number: 6 (lower is better) Translates to: SQWNSRSVYETL*SAGAGCAPGRR Trigger: TCTACGTCCTGGAGCACAACCTGCACCTGCTGATCAGAGAGTTTCATAAACAGACCTTGAGTTCCATTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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| CDS TCA 72 bp | AACTTTTACACTAGACTCATACACATCATTGATGTTTaGCCAGTGGGCCTGGATCTGGGGGTCCTCAATGCG | + |
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Preference number: 6 (lower is better) Translates to: NFYTRLIHIIDV*PVGLDLGVLNA Trigger: CGCATTGAGGACCCCCAGATCCAGGCCCACTGGTCAAACATCAATGATGTGTATGAGTCTAGTGTAAAAGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034411.10 |
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