RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MED1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000018160

Ensembl transcript IDs: ENSMUST00000018304.7, ENSMUST00000092735.12, ENSMUST00000107545.9

Found 654 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGGCTTGGTTTATCCTGCCGCTTCTCCTCCACCCTGTGGAGAAATaGAGTGCTCCCTGGTTCCCAGGCAGGGTGAAGCAGTTTAGCCCC +
Preference number: 1 (lower is better)
Translates to: QAWFILPLLLHPVEK*SAPWFPGRVKQFSP
Trigger: GGGGCTAAACTGCTTCACCCTGCCTGGGAACCAGGGAGCACTGCATTTCTCCACAGGGTGGAGGAGAAGCGGCAGGATAAACCAAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR CCA 90 bp AGCCCCGGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCATTGTGTaGGGTGTGCCCATCAGCAATTCAGGGGCTTATCCTTCATCCAGA +
Preference number: 1 (lower is better)
Translates to: SPGSLLSKFRCWVIV*GVPISNSGAYPSSR
Trigger: TCTGGATGAAGGATAAGCCCCTGAATTGCTGATGGGCACACCCCACACAATGACCCAGCATCTGAACTTGCTTAACAGGGAGCCGGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR CCA 90 bp CAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCTTCCAATaGGCATCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAG +
Preference number: 1 (lower is better)
Translates to: QCPELSKSFPCPCFQ*ASPTGEQPSCECIK
Trigger: CTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAAGCATGGGCACGGGAAGGACTTTGACAGTTCTGGACACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
3UTR CCA 90 bp CACCCCCACCCCGCTGATACAGATCCCAAACGGAATCATCAGGAATaGCACAGTGCAGGTGGTGAAATCAAAGTAAGGCCGCGGACTTTT +
Preference number: 1 (lower is better)
Translates to: HPHPADTDPKRNHQE*HSAGGEIKVRPRTF
Trigger: AAAAGTCCGCGGCCTTACTTTGATTTCACCACCTGCACTGTGCCATTCCTGATGATTCCGTTTGGGATCTGTATCAGCGGGGTGGGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR GCA 90 bp CATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCATaGTTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAA +
Preference number: 1 (lower is better)
Translates to: HCFQCPELSKSFPCP*FQWASPTGEQPSCE
Trigger: TTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAAGCATGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
3UTR GCA 90 bp ACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTaGCCATGCTTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCA +
Preference number: 1 (lower is better)
Translates to: TKHCFQCPELSKSFP*PCFQWASPTGEQPS
Trigger: TGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAAGCATGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
3UTR CCA 90 bp GGGCTCTTAAGCACTGACAGGGCCTGTCTGACTCACCCCTCGGGTTaGTTTACATATATCATTAGTTTCTCCTCTGGACGTGTCTGTTTA +
Preference number: 1 (lower is better)
Translates to: GLLSTDRACLTHPSG*FTYIISFSSGRVCL
Trigger: TAAACAGACACGTCCAGAGGAGAAACTAATGATATATGTAAACCAACCCGAGGGGTGAGTCAGACAGGCCCTGTCAGTGCTTAAGAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
3UTR GCA 90 bp TGCTTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAATaGATCAAGGAATGTATTGCTTTTTCATTTTCTGCCCAGCCCTTC +
Preference number: 1 (lower is better)
Translates to: CFQWASPTGEQPSCE*IKECIAFSFSAQPF
Trigger: GAAGGGCTGGGCAGAAAATGAAAAAGCAATACATTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
3UTR GCA 90 bp TGCCCATGCTTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATaGGAATGCATCAAGGAATGTATTGCTTTTTCATTTTCTGCCCAG +
Preference number: 1 (lower is better)
Translates to: CPCFQWASPTGEQPS*ECIKECIAFSFSAQ
Trigger: CTGGGCAGAAAATGAAAAAGCAATACATTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAAGCATGGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
3UTR TCA 90 bp AAGATAATAGTTTTGGTTTTTCTATTCAACTCCAAAGACAGGCTGTaGTTAGCTCTGTGGGACTGGTGCTGCAGCGTCAGCACAGGCTGC +
Preference number: 1 (lower is better)
Translates to: KIIVLVFLFNSKDRL*LALWDWCCSVSTGC
Trigger: GCAGCCTGTGCTGACGCTGCAGCACCAGTCCCACAGAGCTAATCACAGCCTGTCTTTGGAGTTGAATAGAAAAACCAAAACTATTATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
3UTR GCA 90 bp AGAGTCCAGCTCTTAGGAATGGCATCAGCTCTCCTGCAAACAAAATaGTGGGATGTAGACTTTTGGCACATTGTGGAAGTAGGAGAACTA +
Preference number: 1 (lower is better)
Translates to: RVQLLGMASALLQTK*WDVDFWHIVEVGEL
Trigger: TAGTTCTCCTACTTCCACAATGTGCCAAAAGTCTACATCCCAGCATTTTGTTTGCAGGAGAGCTGATGCCATTCCTAAGAGCTGGACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR CCA 90 bp GTCCAGCTCTTAGGAATGGCATCAGCTCTCCTGCAAACAAAATGCTaGGATGTAGACTTTTGGCACATTGTGGAAGTAGGAGAACTATTA +
Preference number: 1 (lower is better)
Translates to: VQLLGMASALLQTKC*DVDFWHIVEVGELL
Trigger: TAATAGTTCTCCTACTTCCACAATGTGCCAAAAGTCTACATCCCAGCATTTTGTTTGCAGGAGAGCTGATGCCATTCCTAAGAGCTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR GCA 90 bp ACCCTCCAAATACTGAGAACTTCTGTTGCACTCAAAACGGTCTCCTaGATTTCTCTATTTATGAGGTCTTCCTTTGATGTCCCTCAGAAT +
Preference number: 1 (lower is better)
Translates to: TLQILRTSVALKTVS*ISLFMRSSFDVPQN
Trigger: ATTCTGAGGGACATCAAAGGAAGACCTCATAAATAGAGAAATGCAGGAGACCGTTTTGAGTGCAACAGAAGTTCTCAGTATTTGGAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR CCA 90 bp AACAATTTTCCTGCAGAAACTAAGAAGATAGGATTCACAACCAGGTaGCAAATTTCTGAGAAATCCAACCTGGTTTTATCTGAGATACCG +
Preference number: 1 (lower is better)
Translates to: NNFPAETKKIGFTTR*QISEKSNLVLSEIP
Trigger: CGGTATCTCAGATAAAACCAGGTTGGATTTCTCAGAAATTTGCCACCTGGTTGTGAATCCTATCTTCTTAGTTTCTGCAGGAAAATTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR-3UTR GCA 90 bp TTGACTTCATGTCCTTGCCGTCTTTCAAACAGGAGGGTGAGCACACCTGGATGGCACCCTGTGGAGAAATaGAGTGCTCCCTGGTTCCCA +
Preference number: 2 (lower is better)
Translates to: LTSCPCRLSNRRVSTPGWHPVEK*SAPWFP
Trigger: TGGGAACCAGGGAGCACTGCATTTCTCCACAGGGTG...CCATCCAGGTGTGCTCACCCTCCTGTTTGAAAGACGGCAAGGACATGAAGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR-3UTR TCA 90 bp GGAATGGCATCAGCTCTCCTGCAAACAAAATGCTGGGATGTAGACTTTTGGCACATCTGCTGGGACCAGTaGGGACACTATGGGACCCAC +
Preference number: 2 (lower is better)
Translates to: GMASALLQTKCWDVDFWHICWDQ*GHYGTH
Trigger: GTGGGTCCCATAGTGTCCTCACTGGTCCCAGCAGAT...GTGCCAAAAGTCTACATCCCAGCATTTTGTTTGCAGGAGAGCTGATGCCATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR-3UTR TCA 90 bp TTGACTTCATGTCCTTGCCGTCTTTCAAACAGGAGGGTGAGCACACCTGGATGGAAGGCCGCGGACTTTTaGGAGGACCCTCCAAATACT +
Preference number: 2 (lower is better)
Translates to: LTSCPCRLSNRRVSTPGWKAADF*EDPPNT
Trigger: AGTATTTGGAGGGTCCTCTCAAAAGTCCGCGGCCTT...CCATCCAGGTGTGCTCACCCTCCTGTTTGAAAGACGGCAAGGACATGAAGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR-3UTR GCA 90 bp GGAATGGCATCAGCTCTCCTGCAAACAAAATGCTGGGATGTAGACTTTTGGCACTCAAAGTCCTTCCCGTaGCCATGCTTCCAATGGGCA +
Preference number: 2 (lower is better)
Translates to: GMASALLQTKCWDVDFWHSKSFP*PCFQWA
Trigger: TGCCCATTGGAAGCATGGGCACGGGAAGGACTTTGA...GTGCCAAAAGTCTACATCCCAGCATTTTGTTTGCAGGAGAGCTGATGCCATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR-3UTR CCA 90 bp TCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAATGTATTGCTTTTCCAGTGAGGACACTATaGGACCCACTGGCTCTTCTG +
Preference number: 2 (lower is better)
Translates to: SPTGEQPSCECIKECIAFPVRTL*DPLALL
Trigger: CAGAAGAGCCAGTGGGTCCCATAGTGTCCTCACTGG...AAAAGCAATACATTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR-3UTR TCA 90 bp TTGACTTCATGTCCTTGCCGTCTTTCAAACAGGAGGGTGAGCACACCTGGATGGGTTGTTGAAAACCAATaGCCAGAAAAGGGAGAACAC +
Preference number: 2 (lower is better)
Translates to: LTSCPCRLSNRRVSTPGWVVENQ*PEKGEH
Trigger: GTGTTCTCCCTTTTCTGGTCATTGGTTTTCAACAAC...CCATCCAGGTGTGCTCACCCTCCTGTTTGAAAGACGGCAAGGACATGAAGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR-3UTR GCA 90 bp ACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCGGTGAGCAACCTTCATaGGAATGCATCAAGGAATGT +
Preference number: 2 (lower is better)
Translates to: TKHCFQCPELSKSFPCPCGEQPS*ECIKEC
Trigger: ACATTCCTTGATGCATTCGCATGAAGGTTGCTCACC...GCATGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
3UTR-3UTR TCA 90 bp TTTCTGGCAAAGAAATATGACTTGTTTCTGAACAACCAACCACATGGTTTCGGCAGGGCTCTTAAGCACTaGCAGGGCCTGTCTGACTCA +
Preference number: 2 (lower is better)
Translates to: FLAKKYDLFLNNQPHGFGRALKH*QGLSDS
Trigger: TGAGTCAGACAGGCCCTGTCAGTGCTTAAGAGCCCT...GCCGAAACCATGTGGTTGGTTGTTCAGAAACAAGTCATATTTCTTTGCCAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
3UTR-3UTR CCA 90 bp CAGATCCCAAACGGAATCATCAGGAATGGCACAGTGCAGGTGGTGAAATCAAAGTCGGGGAGCATACAGTaGAGTGATTTAAGTCTGAAC +
Preference number: 2 (lower is better)
Translates to: QIPNGIIRNGTVQVVKSKSGSIQ*SDLSLN
Trigger: GTTCAGACTTAAATCACTCCACTGTATGCTCCCCGA...CTTTGATTTCACCACCTGCACTGTGCCATTCCTGATGATTCCGTTTGGGATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR-3UTR CCA 90 bp GGAAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAAAATGCAGTGCTCCCTaGTTCCCAGGCAGGGTGAAG +
Preference number: 2 (lower is better)
Translates to: GKSNSRVITLKLALAITSKCSAP*FPGRVK
Trigger: CTTCACCCTGCCTGGGAACCAGGGAGCACTGCATTT...TGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR CAA 90 bp GTGGCTAAGGATGAAGATAAAGTAGAGCACAAGATTGCCCAGGGATaGATTATGTTTTGTATACTGACATCTGCTGGGACCAGTGAGGAC +
Preference number: 2 (lower is better)
Translates to: VAKDEDKVEHKIAQG*IMFCILTSAGTSED
Trigger: GTCCTCACTGGTCCCAGCAGATGTCAGTATACAAAACATAATCAATCCCTGGGCAATCTTGTGCTCTACTTTATCTTCATCCTTAGCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
3UTR-3UTR TCA 90 bp GACACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCAAATATGACTTGTTTCTaGACAACCAACCACATGGTT +
Preference number: 2 (lower is better)
Translates to: DTKHCFQCPELSKSFPCPNMTCF*TTNHMV
Trigger: AACCATGTGGTTGGTTGTTCAGAAACAAGTCATATT...TGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
3UTR CAA 90 bp CTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAATGTATaGCTTTTTCATTTTCTGCCCAGCCCTTCAAATACATGCACTAAA +
Preference number: 2 (lower is better)
Translates to: LPQVSNLHANASRNV*LFHFLPSPSNTCTK
Trigger: TTTAGTGCATGTATTTGAAGGGCTGGGCAGAAAATGAAAAAGCAATACATTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
3UTR-3UTR TCA 90 bp CTGTTTCTCCAAAAAGGTCCGACTGTGTGCTACACGGTAGCAAGGGTTATCTTCAATATGACTTGTTTCTaGACAACCAACCACATGGTT +
Preference number: 2 (lower is better)
Translates to: LFLQKGPTVCYTVARVIFNMTCF*TTNHMV
Trigger: AACCATGTGGTTGGTTGTTCAGAAACAAGTCATATT...GAAGATAACCCTTGCTACCGTGTAGCACACAGTCGGACCTTTTTGGAGAAACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR-3UTR GCA 90 bp AAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTACATCAGGTCCCCTTaGTCACCTCGAAAACACTTG +
Preference number: 2 (lower is better)
Translates to: KIQFKSYHPQAGFGNYIRYIRSP*SPRKHL
Trigger: CAAGTGTTTTCGAGGTGAGCAAGGGGACCTGATGTA...CCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
3UTR-3UTR GCA 90 bp TTTCTGGCAAAGAAATATGACTTGTTTCTGAACAACCAACCACATGGTTTCGGCTACATCAGGTCCCCTTaGTCACCTCGAAAACACTTG +
Preference number: 2 (lower is better)
Translates to: FLAKKYDLFLNNQPHGFGYIRSP*SPRKHL
Trigger: CAAGTGTTTTCGAGGTGAGCAAGGGGACCTGATGTA...GCCGAAACCATGTGGTTGGTTGTTCAGAAACAAGTCATATTTCTTTGCCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR-3UTR GCA 90 bp ATTTCTCTATTTATGAGGTCTTCCTTTGATGTCCCTCAGAATCCAGACTCAGACCAAGGGTTATCTTCATaGTCACTTAGCATTCCAGGC +
Preference number: 2 (lower is better)
Translates to: ISLFMRSSFDVPQNPDSDQGLSS*SLSIPG
Trigger: GCCTGGAATGCTAAGTGAGCATGAAGATAACCCTTG...GTCTGAGTCTGGATTCTGAGGGACATCAAAGGAAGACCTCATAAATAGAGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR-3UTR TCA 90 bp ATTTCTCTATTTATGAGGTCTTCCTTTGATGTCCCTCAGAATCCAGACTCAGACTTTCAGGCCTTGGCCTaGCAAAAGGAAAATCCAATT +
Preference number: 2 (lower is better)
Translates to: ISLFMRSSFDVPQNPDSDFQALA*QKENPI
Trigger: AATTGGATTTTCCTTTTGTCAGGCCAAGGCCTGAAA...GTCTGAGTCTGGATTCTGAGGGACATCAAAGGAAGACCTCATAAATAGAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR-3UTR CCA 90 bp TTTCTGGCAAAGAAATATGACTTGTTTCTGAACAACCAACCACATGGTTTCGGCACTCACCCCTCGGGTTaGTTTACATATATCATTAGT +
Preference number: 2 (lower is better)
Translates to: FLAKKYDLFLNNQPHGFGTHPSG*FTYIIS
Trigger: ACTAATGATATATGTAAACCAACCCGAGGGGTGAGT...GCCGAAACCATGTGGTTGGTTGTTCAGAAACAAGTCATATTTCTTTGCCAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
3UTR-3UTR CCA 90 bp TACATCAGAGCAGATTTTTGTCCAAAGACCCTTAACATGAAGCCCAAAGACAGACTCCTAATATTCCTATaGTGTCTGAACCCTGTGAAA +
Preference number: 2 (lower is better)
Translates to: YIRADFCPKTLNMKPKDRLLIFL*CLNPVK
Trigger: TTTCACAGGGTTCAGACACCATAGGAATATTAGGAG...TCTGTCTTTGGGCTTCATGTTAAGGGTCTTTGGACAAAAATCTGCTCTGATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR-3UTR GCA 90 bp ACAAAATGCTGGGATGTAGACTTTTGGCACATTGTGGAAGTAGGAGAACTATTACAACCTTCATGCGAATaGATCAAGGAATGTATTGCT +
Preference number: 2 (lower is better)
Translates to: TKCWDVDFWHIVEVGELLQPSCE*IKECIA
Trigger: AGCAATACATTCCTTGATGCATTCGCATGAAGGTTG...TAATAGTTCTCCTACTTCCACAATGTGCCAAAAGTCTACATCCCAGCATTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
3UTR-3UTR TCA 90 bp ATTCCTATGGTGTCTGAACCCTGTGAAAAACCTCCAAAGATAATAGTTTTGGTTTCTCAGCTCTATAGTTaGACATTTTCCCAACCTAGT +
Preference number: 2 (lower is better)
Translates to: IPMVSEPCEKPPKIIVLVSQLYS*TFSQPS
Trigger: ACTAGGTTGGGAAAATGTTCAACTATAGAGCTGAGA...AACCAAAACTATTATCTTTGGAGGTTTTTCACAGGGTTCAGACACCATAGGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR GCA 72 bp TCAGCACAGGCTGCGAGCTCCCCACCAGGCGAGCCTTaGTACCTGCCTCCTACTGTTCTGAACCATAACCTT +
Preference number: 3 (lower is better)
Translates to: SAQAASSPPGEP*YLPPTVLNHNL
Trigger: AAGGTTATGGTTCAGAACAGTAGGAGGCAGGTAGCAAGGCTCGCCTGGTGGGGAGCTCGCAGCCTGTGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
3UTR GCA 72 bp TGGATGGGAGGGAGGTGTCCCAGGCTTGGTTTATCCTaGCGCTTCTCCTCCACCCTGTGGAGAAATGCAGTG +
Preference number: 3 (lower is better)
Translates to: WMGGRCPRLGLS*RFSSTLWRNAV
Trigger: CACTGCATTTCTCCACAGGGTGGAGGAGAAGCGGCAGGATAAACCAAGCCTGGGACACCTCCCTCCCATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR GCA 72 bp TGTCAGCACCACAAGAGAAAGCACTCCAATACACCCTaGCCATGTCACCCAAGACACCGGGCTCTGATAGGG +
Preference number: 3 (lower is better)
Translates to: CQHHKRKHSNTP*PCHPRHRALIG
Trigger: CCCTATCAGAGCCCGGTGTCTTGGGTGACATGGGCAGGGTGTATTGGAGTGCTTTCTCTTGTGGTGCTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR GCA 72 bp CAGTTTAGCCCCGGCTCCCTGTTAAGCAAGTTCAGATaGTGGGTCATTGTGTGGGGTGTGCCCATCAGCAAT +
Preference number: 3 (lower is better)
Translates to: QFSPGSLLSKFR*WVIVWGVPISN
Trigger: ATTGCTGATGGGCACACCCCACACAATGACCCAGCATCTGAACTTGCTTAACAGGGAGCCGGGGCTAAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR TCA 72 bp CTCCAGCAGCAGCAGCAGCAGCAAATAGGTACACGTTaGCTTCATGTCCTTGCCGTCTTTCAAACAGGAGGG +
Preference number: 3 (lower is better)
Translates to: LQQQQQQQIGTR*LHVLAVFQTGG
Trigger: CCCTCCTGTTTGAAAGACGGCAAGGACATGAAGTCAACGTGTACCTATTTGCTGCTGCTGCTGCTGCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR CCA 72 bp TTTAGCCCCGGCTCCCTGTTAAGCAAGTTCAGATGCTaGGTCATTGTGTGGGGTGTGCCCATCAGCAATTCA +
Preference number: 3 (lower is better)
Translates to: FSPGSLLSKFRC*VIVWGVPISNS
Trigger: TGAATTGCTGATGGGCACACCCCACACAATGACCCAGCATCTGAACTTGCTTAACAGGGAGCCGGGGCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR GCA 72 bp GCAGCAGCAAATAGGTACACGTTGACTTCATGTCCTTaGCGTCTTTCAAACAGGAGGGTGAGCACACCTGGA +
Preference number: 3 (lower is better)
Translates to: AAANRYTLTSCP*RLSNRRVSTPG
Trigger: TCCAGGTGTGCTCACCCTCCTGTTTGAAAGACGGCAAGGACATGAAGTCAACGTGTACCTATTTGCTGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR CCA 72 bp CCCGCTGATACAGATCCCAAACGGAATCATCAGGAATaGCACAGTGCAGGTGGTGAAATCAAAGTAAGGCCG +
Preference number: 3 (lower is better)
Translates to: PADTDPKRNHQE*HSAGGEIKVRP
Trigger: CGGCCTTACTTTGATTTCACCACCTGCACTGTGCCATTCCTGATGATTCCGTTTGGGATCTGTATCAGCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR CCA 72 bp TCCCTGTTAAGCAAGTTCAGATGCTGGGTCATTGTGTaGGGTGTGCCCATCAGCAATTCAGGGGCTTATCCT +
Preference number: 3 (lower is better)
Translates to: SLLSKFRCWVIV*GVPISNSGAYP
Trigger: AGGATAAGCCCCTGAATTGCTGATGGGCACACCCCACACAATGACCCAGCATCTGAACTTGCTTAACAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR-3UTR CAA 90 bp CCGTGCCCATGCTTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAAGCATCAAGGAATGTATaGCTTTTTCATTTTCTGCCC +
Preference number: 3 (lower is better)
Translates to: PCPCFQWASPTGEQPSCEASRNV*LFHFLP
Trigger: GGGCAGAAAATGAAAAAGCAATACATTCCTTGATGC...TTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAAGCATGGGCACGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
3UTR-3UTR CAA 90 bp TGTCAAAGTCCTTCCCGTGCCCATGCTTCCAATGGGCATCTCCCACAGGTGAGCGGGATTGATTATGTTTaGTATACTGACATCTGCTGG +
Preference number: 3 (lower is better)
Translates to: CQSPSRAHASNGHLPQVSGIDYV*YTDICW
Trigger: CCAGCAGATGTCAGTATACAAAACATAATCAATCCC...GCTCACCTGTGGGAGATGCCCATTGGAAGCATGGGCACGGGAAGGACTTTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR CCA 72 bp AGCACTGACAGGGCCTGTCTGACTCACCCCTCGGGTTaGTTTACATATATCATTAGTTTCTCCTCTGGACGT +
Preference number: 3 (lower is better)
Translates to: STDRACLTHPSG*FTYIISFSSGR
Trigger: ACGTCCAGAGGAGAAACTAATGATATATGTAAACCAACCCGAGGGGTGAGTCAGACAGGCCCTGTCAGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
3UTR TCA 72 bp GTTTTGGTTTTTCTATTCAACTCCAAAGACAGGCTGTaGTTAGCTCTGTGGGACTGGTGCTGCAGCGTCAGC +
Preference number: 3 (lower is better)
Translates to: VLVFLFNSKDRL*LALWDWCCSVS
Trigger: GCTGACGCTGCAGCACCAGTCCCACAGAGCTAATCACAGCCTGTCTTTGGAGTTGAATAGAAAAACCAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
3UTR GCA 72 bp GACTCAGACCTGTTTCTCCAAAAAGGTCCGACTGTGTaGTACACGGTAGCAAGGGTTATCTTCATGCTCACT +
Preference number: 3 (lower is better)
Translates to: DSDLFLQKGPTV*YTVARVIFMLT
Trigger: AGTGAGCATGAAGATAACCCTTGCTACCGTGTAGCACACAGTCGGACCTTTTTGGAGAAACAGGTCTGAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR-3UTR CAA 90 bp GACACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCAGCATCAAGGAATGTATaGCTTTTTCATTTTCTGCCC +
Preference number: 3 (lower is better)
Translates to: DTKHCFQCPELSKSFPCPASRNV*LFHFLP
Trigger: GGGCAGAAAATGAAAAAGCAATACATTCCTTGATGC...TGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
3UTR-3UTR CAA 90 bp GGAATGGCATCAGCTCTCCTGCAAACAAAATGCTGGGATGTAGACTTTTGGCACAACAGACACCAAACATaGCTTTCAGTGTCCAGAACT +
Preference number: 3 (lower is better)
Translates to: GMASALLQTKCWDVDFWHNRHQT*LSVSRT
Trigger: AGTTCTGGACACTGAAAGCAATGTTTGGTGTCTGTT...GTGCCAAAAGTCTACATCCCAGCATTTTGTTTGCAGGAGAGCTGATGCCATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR TCA 72 bp CACCAGGCGAGCCTTGCTACCTGCCTCCTACTGTTCTaGACCATAACCTTCATAGATTTAGGAACAAACATT +
Preference number: 3 (lower is better)
Translates to: HQASLATCLLLF*TITFIDLGTNI
Trigger: AATGTTTGTTCCTAAATCTATGAAGGTTATGGTTCAGAACAGTAGGAGGCAGGTAGCAAGGCTCGCCTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
3UTR CCA 72 bp TCACAACCAGGTGGCAAATTTCTGAGAAATCCAACCTaGTTTTATCTGAGATACCGCACGGCTACTATGTCA +
Preference number: 3 (lower is better)
Translates to: SQPGGKFLRNPT*FYLRYRTATMS
Trigger: TGACATAGTAGCCGTGCGGTATCTCAGATAAAACCAGGTTGGATTTCTCAGAAATTTGCCACCTGGTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR-3UTR CAA 90 bp ACAAAATGCTGGGATGTAGACTTTTGGCACATTGTGGAAGTAGGAGAACTATTATTACATCAGGTCCCCTaGCTCACCTCGAAAACACTT +
Preference number: 3 (lower is better)
Translates to: TKCWDVDFWHIVEVGELLLHQVP*LTSKTL
Trigger: AAGTGTTTTCGAGGTGAGCAAGGGGACCTGATGTAA...TAATAGTTCTCCTACTTCCACAATGTGCCAAAAGTCTACATCCCAGCATTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR-3UTR CAA 90 bp TACATCAGAGCAGATTTTTGTCCAAAGACCCTTAACATGAAGCCCAAAGACAGACTAACTCGGGATTCTTaGATCTGGGATGAAGACAGA +
Preference number: 3 (lower is better)
Translates to: YIRADFCPKTLNMKPKDRLTRDS*IWDEDR
Trigger: TCTGTCTTCATCCCAGATCAAAGAATCCCGAGTTAG...TCTGTCTTTGGGCTTCATGTTAAGGGTCTTTGGACAAAAATCTGCTCTGATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR TCA 72 bp ATTTATTGCCTTGGGACACAGAAATGGCGGAGTTGTTaGAAACCAATGACCAGAAAAGGGAGAACACCAAAA +
Preference number: 3 (lower is better)
Translates to: IYCLGTQKWRSC*KPMTRKGRTPK
Trigger: TTTTGGTGTTCTCCCTTTTCTGGTCATTGGTTTTCAACAACTCCGCCATTTCTGTGTCCCAAGGCAATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR GCA 72 bp AGTAGATTTTCCAAGTCTATGCTAACTCCAACAACCTaGAGTGTTGGATGTAGAAATCGTCCGTATCTGATG +
Preference number: 3 (lower is better)
Translates to: SRFSKSMLTPTT*SVGCRNRPYLM
Trigger: CATCAGATACGGACGATTTCTACATCCAACACTGCAGGTTGTTGGAGTTAGCATAGACTTGGAAAATCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR-3UTR CAA 90 bp TCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAATGTATTGCTTTTGCAAAGAAATATGACTaGTTTCTGAACAACCAACCA +
Preference number: 3 (lower is better)
Translates to: SPTGEQPSCECIKECIAFAKKYD*FLNNQP
Trigger: TGGTTGGTTGTTCAGAAACAAGTCATATTTCTTTGC...AAAAGCAATACATTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
3UTR-3UTR CAA 90 bp GGAAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGGATTGATTATGTTTaGTATACTGACATCTGCTGG +
Preference number: 3 (lower is better)
Translates to: GKSNSRVITLKLALAITSGIDYV*YTDICW
Trigger: CCAGCAGATGTCAGTATACAAAACATAATCAATCCC...TGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
3UTR CCA 72 bp CCTGCAGAAACTAAGAAGATAGGATTCACAACCAGGTaGCAAATTTCTGAGAAATCCAACCTGGTTTTATCT +
Preference number: 3 (lower is better)
Translates to: PAETKKIGFTTR*QISEKSNLVLS
Trigger: AGATAAAACCAGGTTGGATTTCTCAGAAATTTGCCACCTGGTTGTGAATCCTATCTTCTTAGTTTCTGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR TCA 72 bp TTTTTAACTGTTTATCTCGGGGAGCATACAGTGGAGTaGTTTAAGTCTGAACTCCTTCTTCTTGTGATGAAG +
Preference number: 3 (lower is better)
Translates to: FLTVYLGEHTVE*FKSELLLLVMK
Trigger: CTTCATCACAAGAAGAAGGAGTTCAGACTTAAATCACTCCACTGTATGCTCCCCGAGATAAACAGTTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR-3UTR CAA 90 bp ACAAAATGCTGGGATGTAGACTTTTGGCACATTGTGGAAGTAGGAGAACTATTAGCAAAGAAATATGACTaGTTTCTGAACAACCAACCA +
Preference number: 3 (lower is better)
Translates to: TKCWDVDFWHIVEVGELLAKKYD*FLNNQP
Trigger: TGGTTGGTTGTTCAGAAACAAGTCATATTTCTTTGC...TAATAGTTCTCCTACTTCCACAATGTGCCAAAAGTCTACATCCCAGCATTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp TCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCTTCCAATGGGCATCTCCCACTGGGAATGGGCGGGGTaGCAACACCTGGGGGCGTCT +
Preference number: 4 (lower is better)
Translates to: SRTVKVLPVPMLPMGISHWEWAG*QHLGAS
Trigger: AGACGCCCCCAGGTGTTGCCACCCCGCCCATTCCCA...GTGGGAGATGCCCATTGGAAGCATGGGCACGGGAAGGACTTTGACAGTTCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CCGTGCCCATGCTTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAAGCTGGCGACTTACTGTaGCTGGGAGAACCCCGTTCG +
Preference number: 4 (lower is better)
Translates to: PCPCFQWASPTGEQPSCEAGDLL*LGEPRS
Trigger: CGAACGGGGTTCTCCCAGCCACAGTAAGTCGCCAGC...TTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAAGCATGGGCACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp TGTCAAAGTCCTTCCCGTGCCCATGCTTCCAATGGGCATCTCCCACAGGTGAGCCCCCACTCCGCGGGGTaGGATAACCAACACTTCCAT +
Preference number: 4 (lower is better)
Translates to: CQSPSRAHASNGHLPQVSPHSAG*DNQHFH
Trigger: ATGGAAGTGTTGGTTATCTCACCCCGCGGAGTGGGG...GCTCACCTGTGGGAGATGCCCATTGGAAGCATGGGCACGGGAAGGACTTTGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp TCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCTTCCAATGGGCATCTCCCACACACCTGGGGGCGTCTaGGATCGTCCTGAACTGCCT +
Preference number: 4 (lower is better)
Translates to: SRTVKVLPVPMLPMGISHTPGGV*DRPELP
Trigger: AGGCAGTTCAGGACGATCTCAGACGCCCCCAGGTGT...GTGGGAGATGCCCATTGGAAGCATGGGCACGGGAAGGACTTTGACAGTTCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CCATGCCCTTTAGGGCTCTTAAGCACTGACAGGGCCTGTCTGACTCACCCCTCGAGGCTATCTGTGGCCTaGGCCCATCTCCACCACTTT +
Preference number: 4 (lower is better)
Translates to: PCPLGLLSTDRACLTHPSRLSVA*AHLHHF
Trigger: AAAGTGGTGGAGATGGGCTCAGGCCACAGATAGCCT...CGAGGGGTGAGTCAGACAGGCCCTGTCAGTGCTTAAGAGCCCTAAAGGGCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp CCATGCCCTTTAGGGCTCTTAAGCACTGACAGGGCCTGTCTGACTCACCCCTCGCTTCCCCTCAGTGTCTaGCTTCTTCCGCTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: PCPLGLLSTDRACLTHPSLPLSV*LLPLWR
Trigger: CCTCCAAAGCGGAAGAAGGCAGACACTGAGGGGAAG...CGAGGGGTGAGTCAGACAGGCCCTGTCAGTGCTTAAGAGCCCTAAAGGGCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp TGTCAAAGTCCTTCCCGTGCCCATGCTTCCAATGGGCATCTCCCACAGGTGAGCGTGAGACACTGGCTGTaGGTACGTTGCTGGGGGAGT +
Preference number: 4 (lower is better)
Translates to: CQSPSRAHASNGHLPQVSVRHWL*VRCWGS
Trigger: ACTCCCCCAGCAACGTACCCACAGCCAGTGTCTCAC...GCTCACCTGTGGGAGATGCCCATTGGAAGCATGGGCACGGGAAGGACTTTGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CCATGCCCTTTAGGGCTCTTAAGCACTGACAGGGCCTGTCTGACTCACCCCTCGTCGGATACCATCCTCTaGGCTGGGACTGTTCTGGTA +
Preference number: 4 (lower is better)
Translates to: PCPLGLLSTDRACLTHPSSDTIL*AGTVLV
Trigger: TACCAGAACAGTCCCAGCTCAGAGGATGGTATCCGA...CGAGGGGTGAGTCAGACAGGCCCTGTCAGTGCTTAAGAGCCCTAAAGGGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp CCGTGCCCATGCTTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAAGGTGGTTCTTGGTGTTaGCGGCCATCGAAGAGACAG +
Preference number: 4 (lower is better)
Translates to: PCPCFQWASPTGEQPSCEGGSWC*RPSKRQ
Trigger: CTGTCTCTTCGATGGCCGGCAACACCAAGAACCACC...TTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAAGCATGGGCACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCTGGTCATGCCATACCCTaGGCTGCTAGCCGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PNIAFSVQNCQSPSRAHAGHAIP*AASRGQ
Trigger: CTGCCCCCGGCTAGCAGCCCAGGGTATGGCATGACC...AGCATGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp TGTCAAAGTCCTTCCCGTGCCCATGCTTCCAATGGGCATCTCCCACAGGTGAGCTTGGGTTGTTGCCTGTaGTCATGCCATACCCTGGGC +
Preference number: 4 (lower is better)
Translates to: CQSPSRAHASNGHLPQVSLGCCL*SCHTLG
Trigger: GCCCAGGGTATGGCATGACCACAGGCAACAACCCAA...GCTCACCTGTGGGAGATGCCCATTGGAAGCATGGGCACGGGAAGGACTTTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CCGTGCCCATGCTTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAAAGGGGTGCCAATTGGTaGGCAGTCATCACTCGTGCT +
Preference number: 4 (lower is better)
Translates to: PCPCFQWASPTGEQPSCERGANW*AVITRA
Trigger: AGCACGAGTGATGACTGCCCACCAATTGGCACCCCT...TTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAAGCATGGGCACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCTCGGGGTGGCAACACCTaGGGGCGTCTGAGATCGTCC +
Preference number: 4 (lower is better)
Translates to: PNIAFSVQNCQSPSRAHARGGNT*GRLRSS
Trigger: GGACGATCTCAGACGCCCCCAGGTGTTGCCACCCCG...AGCATGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CCGTGCCCATGCTTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAACCGGGAGGCCTTGAATaGGAAGGGGATATGTTTGGC +
Preference number: 4 (lower is better)
Translates to: PCPCFQWASPTGEQPSCEPGGLE*EGDMFG
Trigger: GCCAAACATATCCCCTTCCCATTCAAGGCCTCCCGG...TTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAAGCATGGGCACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CCGTGCCCATGCTTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAACATCTGACTGTCTATTaGATCCTCACCCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: PCPCFQWASPTGEQPSCEHLTVY*ILTPRP
Trigger: GGGCCTGGGGGTGAGGATCCAATAGACAGTCAGATG...TTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAAGCATGGGCACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CCATGCCCTTTAGGGCTCTTAAGCACTGACAGGGCCTGTCTGACTCACCCCTCGTTCTCACGTTTGCTCTaGAACTCCCCTCCTGACGTG +
Preference number: 4 (lower is better)
Translates to: PCPLGLLSTDRACLTHPSFSRLL*NSPPDV
Trigger: CACGTCAGGAGGGGAGTTCCAGAGCAAACGTGAGAA...CGAGGGGTGAGTCAGACAGGCCCTGTCAGTGCTTAAGAGCCCTAAAGGGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp CCACCAGGCGAGCCTTGCTACCTGCCTCCTACTGTTCTGAACCATAACCTTCATACGTTGCTGGGGGAGTaGTACACTGGCTTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: PPGEPCYLPPTVLNHNLHTLLGE*YTGLEL
Trigger: CAGCTCCAAGCCAGTGTAGCACTCCCCCAGCAACGT...ATGAAGGTTATGGTTCAGAACAGTAGGAGGCAGGTAGCAAGGCTCGCCTGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp TCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCTTCCAATGGGCATCTCCCACTGTGAGAGGAGGGCTTaGCCACCATCACTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: SRTVKVLPVPMLPMGISHCERRA*PPSLSL
Trigger: AAGGGACAGTGATGGTGGGCAAGCCCTCCTCTCACA...GTGGGAGATGCCCATTGGAAGCATGGGCACGGGAAGGACTTTGACAGTTCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CCGTGCCCATGCTTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAAGCAGTGCTGCTGACCTaGAAGAGCAGCGTAAAATCG +
Preference number: 4 (lower is better)
Translates to: PCPCFQWASPTGEQPSCEAVLLT*KSSVKS
Trigger: CGATTTTACGCTGCTCTTCCAGGTCAGCAGCACTGC...TTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAAGCATGGGCACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp TCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCTTCCAATGGGCATCTCCCACACTCGGCCAGGGTGCTaGAAGGTGATTTTGCTGACC +
Preference number: 4 (lower is better)
Translates to: SRTVKVLPVPMLPMGISHTRPGC*KVILLT
Trigger: GGTCAGCAAAATCACCTTCCAGCACCCTGGCCGAGT...GTGGGAGATGCCCATTGGAAGCATGGGCACGGGAAGGACTTTGACAGTTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CCATGCCCTTTAGGGCTCTTAAGCACTGACAGGGCCTGTCTGACTCACCCCTCGAATGAGAGACAGTGCTaGGGTGTCAGCCTGTATGGT +
Preference number: 4 (lower is better)
Translates to: PCPLGLLSTDRACLTHPSNERQC*GVSLYG
Trigger: ACCATACAGGCTGACACCCCAGCACTGTCTCTCATT...CGAGGGGTGAGTCAGACAGGCCCTGTCAGTGCTTAAGAGCCCTAAAGGGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp TCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCTTCCAATGGGCATCTCCCACTTGGGTTGTTGCCTGTaGTCATGCCATACCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SRTVKVLPVPMLPMGISHLGCCL*SCHTLG
Trigger: GCCCAGGGTATGGCATGACCACAGGCAACAACCCAA...GTGGGAGATGCCCATTGGAAGCATGGGCACGGGAAGGACTTTGACAGTTCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp GGAATGGCATCAGCTCTCCTGCAAACAAAATGCTGGGATGTAGACTTTTGGCACCGGGGTGGCAACACCTaGGGGCGTCTGAGATCGTCC +
Preference number: 4 (lower is better)
Translates to: GMASALLQTKCWDVDFWHRGGNT*GRLRSS
Trigger: GGACGATCTCAGACGCCCCCAGGTGTTGCCACCCCG...GTGCCAAAAGTCTACATCCCAGCATTTTGTTTGCAGGAGAGCTGATGCCATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CCGTGCCCATGCTTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAAGGATTCTCCCCATGGTaGGCCACTTTGACATCACAA +
Preference number: 4 (lower is better)
Translates to: PCPCFQWASPTGEQPSCEGFSPW*ATLTSQ
Trigger: TTGTGATGTCAAAGTGGCTCACCATGGGGAGAATCC...TTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAAGCATGGGCACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp ACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCATACTGGGCTGGGGGTaGGACACTGGCTGTGGGTAC +
Preference number: 4 (lower is better)
Translates to: TKHCFQCPELSKSFPCPCILGWG*DTGCGY
Trigger: GTACCCACAGCCAGTGTCTCACCCCCAGCCCAGTAT...GCATGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp GACACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCAACACCTGGGGGCGTCTaGGATCGTCCTGAACTGCCT +
Preference number: 4 (lower is better)
Translates to: DTKHCFQCPELSKSFPCPTPGGV*DRPELP
Trigger: AGGCAGTTCAGGACGATCTCAGACGCCCCCAGGTGT...TGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp TTGACTTCATGTCCTTGCCGTCTTTCAAACAGGAGGGTGAGCACACCTGGATGGGCCTCCGGGAGGCCTTaGATGGGAAGGGGATATGTT +
Preference number: 4 (lower is better)
Translates to: LTSCPCRLSNRRVSTPGWASGRP*MGRGYV
Trigger: AACATATCCCCTTCCCATTCAAGGCCTCCCGGAGGC...CCATCCAGGTGTGCTCACCCTCCTGTTTGAAAGACGGCAAGGACATGAAGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CCACCAGGCGAGCCTTGCTACCTGCCTCCTACTGTTCTGAACCATAACCTTCATTTCATGAGCATCGGGTaGTTCTTGGTGTTGCCGGCC +
Preference number: 4 (lower is better)
Translates to: PPGEPCYLPPTVLNHNLHFMSIG*FLVLPA
Trigger: GGCCGGCAACACCAAGAACCACCCGATGCTCATGAA...ATGAAGGTTATGGTTCAGAACAGTAGGAGGCAGGTAGCAAGGCTCGCCTGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp TCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCTTCCAATGGGCATCTCCCACCTTCAGTCTGGTGCTTaGGTTTGTCAGGTGGGACTC +
Preference number: 4 (lower is better)
Translates to: SRTVKVLPVPMLPMGISHLQSGA*VCQVGL
Trigger: GAGTCCCACCTGACAAACCCAAGCACCAGACTGAAG...GTGGGAGATGCCCATTGGAAGCATGGGCACGGGAAGGACTTTGACAGTTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp ATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCCCCTTGTGGGAATGGGCGGGGTaGCAACACCTGGGGGCGTCT +
Preference number: 4 (lower is better)
Translates to: IQELSPSSWLWQLHQVPLWEWAG*QHLGAS
Trigger: AGACGCCCCCAGGTGTTGCCACCCCGCCCATTCCCA...CAAGGGGACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CCATGCCCTTTAGGGCTCTTAAGCACTGACAGGGCCTGTCTGACTCACCCCTCGAATTTTTGGACTGGCTaGATCCAGAAGACCCTTGGC +
Preference number: 4 (lower is better)
Translates to: PCPLGLLSTDRACLTHPSNFWTG*IQKTLG
Trigger: GCCAAGGGTCTTCTGGATCCAGCCAGTCCAAAAATT...CGAGGGGTGAGTCAGACAGGCCCTGTCAGTGCTTAAGAGCCCTAAAGGGCATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CCGTGCCCATGCTTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAAACCCCGTTCGTGCTTTaGAGTGGAACCACTGATAAG +
Preference number: 4 (lower is better)
Translates to: PCPCFQWASPTGEQPSCETPFVL*SGTTDK
Trigger: CTTATCAGTGGTTCCACTCCAAAGCACGAACGGGGT...TTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAAGCATGGGCACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CAGATCCCAAACGGAATCATCAGGAATGGCACAGTGCAGGTGGTGAAATCAAAGCAGTGCCACTGGCACTaGGGTGAGAGCCCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: QIPNGIIRNGTVQVVKSKQCHWH*GESPVH
Trigger: ATGGACTGGGCTCTCACCTCAGTGCCAGTGGCACTG...CTTTGATTTCACCACCTGCACTGTGCCATTCCTGATGATTCCGTTTGGGATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCTGGCTTGGAGCTGGGGTaGTATGAGGTGTATCCAGCG +
Preference number: 4 (lower is better)
Translates to: PNIAFSVQNCQSPSRAHAGLELG*YEVYPA
Trigger: CGCTGGATACACCTCATATCACCCCAGCTCCAAGCC...AGCATGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp CCATGCCCTTTAGGGCTCTTAAGCACTGACAGGGCCTGTCTGACTCACCCCTCGGTTCTGGTTAAATTTTaGATGGAGCCGTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: PCPLGLLSTDRACLTHPSVLVKF*MEPFQE
Trigger: CTCCTGGAACGGCTCCATGCAAAATTTAACCAGAAC...CGAGGGGTGAGTCAGACAGGCCCTGTCAGTGCTTAAGAGCCCTAAAGGGCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp TCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCTTCCAATGGGCATCTCCCACGTTTCATCTTGGTACTaGTGGACCCACTGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: SRTVKVLPVPMLPMGISHVSSWY*WTHCSV
Trigger: GACTGAGCAGTGGGTCCAGCAGTACCAAGATGAAAC...GTGGGAGATGCCCATTGGAAGCATGGGCACGGGAAGGACTTTGACAGTTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp AGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCCCCTTGCTCACCTCATCGAAGAGACAGGTaGCGGCGTGTGATGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SYHPQAGFGNYIRSPCSPHRRDR*RRVMRR
Trigger: CCTCCTCATCACACGCCGCCACCTGTCTCTTCGATG...AGGTGAGCAAGGGGACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp AGACACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCGCATCGGGTGGTTCTTaGTGTTGCCGGCCATCGAAG +
Preference number: 4 (lower is better)
Translates to: RHQTLLSVSRTVKVLPVPASGGS*CCRPSK
Trigger: CTTCGATGGCCGGCAACACCAAGAACCACCCGATGC...GGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp ACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCGGGGGAGTGCTACACTaGCTTGGAGCTGGGGTGATA +
Preference number: 4 (lower is better)
Translates to: TKHCFQCPELSKSFPCPCGGVLH*LGAGVI
Trigger: TATCACCCCAGCTCCAAGCCAGTGTAGCACTCCCCC...GCATGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp AGACACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCCTGTGGGTACGTTGCTaGGGGAGTGCTACACTGGCT +
Preference number: 4 (lower is better)
Translates to: RHQTLLSVSRTVKVLPVPLWVRC*GSATLA
Trigger: AGCCAGTGTAGCACTCCCCCAGCAACGTACCCACAG...GGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CCATGCCCTTTAGGGCTCTTAAGCACTGACAGGGCCTGTCTGACTCACCCCTCGACTGTCCACATTCTGTaGTGTATATGCTGGCGACTT +
Preference number: 4 (lower is better)
Translates to: PCPLGLLSTDRACLTHPSTVHIL*CICWRL
Trigger: AAGTCGCCAGCATATACACCACAGAATGTGGACAGT...CGAGGGGTGAGTCAGACAGGCCCTGTCAGTGCTTAAGAGCCCTAAAGGGCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CCATGCCCTTTAGGGCTCTTAAGCACTGACAGGGCCTGTCTGACTCACCCCTCGTTTCGACCAGTTCTCTaGCTTCATGCTGTGAGACTT +
Preference number: 4 (lower is better)
Translates to: PCPLGLLSTDRACLTHPSFRPVL*LHAVRL
Trigger: AAGTCTCACAGCATGAAGCCAGAGAACTGGTCGAAA...CGAGGGGTGAGTCAGACAGGCCCTGTCAGTGCTTAAGAGCCCTAAAGGGCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp AATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCCTTCTCCTCCACCCCTaGGCTGCTAGCCGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: NPIQELSPSSWLWQLHQVLLLHP*AASRGQ
Trigger: CTGCCCCCGGCTAGCAGCCCAGGGGTGGAGGAGAAG...GACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092735.12
CDS-3UTR TCA 90 bp GGAATGGCATCAGCTCTCCTGCAAACAAAATGCTGGGATGTAGACTTTTGGCACGTTCCCTGCAGGCTCTaGCCATCAGGAAGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: GMASALLQTKCWDVDFWHVPCRL*PSGRGA
Trigger: TGCTCCTCTTCCTGATGGTCAGAGCCTGCAGGGAAC...GTGCCAAAAGTCTACATCCCAGCATTTTGTTTGCAGGAGAGCTGATGCCATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CCGTGCCCATGCTTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAATCATTCACAGGGTGCTaGAAAGATACACTGAAGCGA +
Preference number: 4 (lower is better)
Translates to: PCPCFQWASPTGEQPSCESFTGC*KDTLKR
Trigger: TCGCTTCAGTGTATCTTTTCAGCACCCTGTGAATGA...TTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAAGCATGGGCACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp TTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAATGGGCCAATGCTGTCTaGACTGGACAGTCGGACCAT +
Preference number: 4 (lower is better)
Translates to: FQWASPTGEQPSCECIKEWANAV*TGQSDH
Trigger: ATGGTCCGACTGTCCAGTTCAGACAGCATTGGCCCA...TTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp GACACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCAGTCAGTAAAGGACTCTaGCTCCCACTGTGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: DTKHCFQCPELSKSFPCPVSKGL*LPLWCS
Trigger: GGAGCACCACAGTGGGAGTCAGAGTCCTTTACTGAC...TGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CCATGCCCTTTAGGGCTCTTAAGCACTGACAGGGCCTGTCTGACTCACCCCTCGGTCCCTTTAGGAATCTaGATGGTAATCTTGGGAATG +
Preference number: 4 (lower is better)
Translates to: PCPLGLLSTDRACLTHPSVPLGI*MVILGM
Trigger: CATTCCCAAGATTACCATTCAGATTCCTAAAGGGAC...CGAGGGGTGAGTCAGACAGGCCCTGTCAGTGCTTAAGAGCCCTAAAGGGCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CACCCCTCGGGTTGGTTTACATATATCATTAGTTTCTCCTCTGGACGTGTCTGTGCGTCACTTTGGCTTTaGTGCTCGGGGAGCCTCCGT +
Preference number: 4 (lower is better)
Translates to: HPSGWFTYIISFSSGRVCASLWL*CSGSLR
Trigger: ACGGAGGCTCCCCGAGCATCAAAGCCAAAGTGACGC...ACAGACACGTCCAGAGGAGAAACTAATGATATATGTAAACCAACCCGAGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp GACACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCAAGGCTATCTGTGGCCTaGGCCCATCTCCACCACTTT +
Preference number: 4 (lower is better)
Translates to: DTKHCFQCPELSKSFPCPRLSVA*AHLHHF
Trigger: AAAGTGGTGGAGATGGGCTCAGGCCACAGATAGCCT...TGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp CCATGCCCTTTAGGGCTCTTAAGCACTGACAGGGCCTGTCTGACTCACCCCTCGTTCTTTTCCCTTAACTaGTGTACAAGCTCTGGACAG +
Preference number: 4 (lower is better)
Translates to: PCPLGLLSTDRACLTHPSFFSLN*CTSSGQ
Trigger: CTGTCCAGAGCTTGTACAGCAGTTAAGGGAAAAGAA...CGAGGGGTGAGTCAGACAGGCCCTGTCAGTGCTTAAGAGCCCTAAAGGGCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp TTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAAGGAACTCGGCCAGGGTaGTGGAAGGTGATTTTGCTG +
Preference number: 4 (lower is better)
Translates to: FQWASPTGEQPSCECIKEGTRPG*WKVILL
Trigger: CAGCAAAATCACCTTCCAGCACCCTGGCCGAGTTCC...TTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp AGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCCCCTTGCTCACCTGGAACTCGGCCAGGGTaGTGGAAGGTGATTTTGCTG +
Preference number: 4 (lower is better)
Translates to: SYHPQAGFGNYIRSPCSPGTRPG*WKVILL
Trigger: CAGCAAAATCACCTTCCAGCACCCTGGCCGAGTTCC...AGGTGAGCAAGGGGACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp TCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCTTCCAATGGGCATCTCCCACTTACATCTGGGCCAATaGTGTCTGAACTGGACAGTC +
Preference number: 4 (lower is better)
Translates to: SRTVKVLPVPMLPMGISHLHLGQ*CLNWTV
Trigger: GACTGTCCAGTTCAGACAGCATTGGCCCAGATGTAA...GTGGGAGATGCCCATTGGAAGCATGGGCACGGGAAGGACTTTGACAGTTCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp CCACCAGGCGAGCCTTGCTACCTGCCTCCTACTGTTCTGAACCATAACCTTCATGCTTCCAGCAGCATCTaGAATAAGGTCAGCTGGATC +
Preference number: 4 (lower is better)
Translates to: PPGEPCYLPPTVLNHNLHASSSI*NKVSWI
Trigger: GATCCAGCTGACCTTATTGCAGATGCTGCTGGAAGC...ATGAAGGTTATGGTTCAGAACAGTAGGAGGCAGGTAGCAAGGCTCGCCTGGTGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp CACCCCTCGGGTTGGTTTACATATATCATTAGTTTCTCCTCTGGACGTGTCTGTCATCATTGGAGGGAGTaGGGCTGCGCTTGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: HPSGWFTYIISFSSGRVCHHWRE*GCACLA
Trigger: AGCCAGGCAAGCGCAGCCGCACTCCCTCCAATGATG...ACAGACACGTCCAGAGGAGAAACTAATGATATATGTAAACCAACCCGAGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp TCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCTTCCAATGGGCATCTCCCACTTGGAGGCTTATCCTTaGTCTTCCCATCATTGGAGG +
Preference number: 4 (lower is better)
Translates to: SRTVKVLPVPMLPMGISHLEAYP*SSHHWR
Trigger: CCTCCAATGATGGGAAGAGCAAGGATAAGCCTCCAA...GTGGGAGATGCCCATTGGAAGCATGGGCACGGGAAGGACTTTGACAGTTCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp AGACACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCGGAGAACCCCGTTCGTaGTTTGGAGTGGAACCACTG +
Preference number: 4 (lower is better)
Translates to: RHQTLLSVSRTVKVLPVPGEPRS*FGVEPL
Trigger: CAGTGGTTCCACTCCAAAGCACGAACGGGGTTCTCC...GGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp AGACACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCTTCATGAGCATCGGGTaGTTCTTGGTGTTGCCGGCC +
Preference number: 4 (lower is better)
Translates to: RHQTLLSVSRTVKVLPVPFMSIG*FLVLPA
Trigger: GGCCGGCAACACCAAGAACCACCCGATGCTCATGAA...GGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp TTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCCCCTTGCCTGTGGGTACGTTGCTaGGGGAGTGCTACACTGGCT +
Preference number: 4 (lower is better)
Translates to: FKSYHPQAGFGNYIRSPCLWVRC*GSATLA
Trigger: AGCCAGTGTAGCACTCCCCCAGCAACGTACCCACAG...GCAAGGGGACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp TTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAACCATCCTCTGAATACTaGGCTGGGGGTGAGACACTG +
Preference number: 4 (lower is better)
Translates to: FQWASPTGEQPSCECIKEPSSEY*AGGETL
Trigger: CAGTGTCTCACCCCCAGCCCAGTATTCAGAGGATGG...TTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp ACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCCCGGGAGGCCTTGAATaGGAAGGGGATATGTTTGGC +
Preference number: 4 (lower is better)
Translates to: TKHCFQCPELSKSFPCPCPGGLE*EGDMFG
Trigger: GCCAAACATATCCCCTTCCCATTCAAGGCCTCCCGG...GCATGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp ATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCCCCTTGCCACTGGCACTGAGGTaGGAGCCCAGTCCATTCTGT +
Preference number: 4 (lower is better)
Translates to: IQELSPSSWLWQLHQVPLPLALR*EPSPFC
Trigger: ACAGAATGGACTGGGCTCTCACCTCAGTGCCAGTGG...CAAGGGGACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CACCCCTCGGGTTGGTTTACATATATCATTAGTTTCTCCTCTGGACGTGTCTGTGTTCCCTGCAGGCTCTaGCCATCAGGAAGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: HPSGWFTYIISFSSGRVCVPCRL*PSGRGA
Trigger: TGCTCCTCTTCCTGATGGTCAGAGCCTGCAGGGAAC...ACAGACACGTCCAGAGGAGAAACTAATGATATATGTAAACCAACCCGAGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp ATAATACTTCCTGTCTCTCCAAAACGTGACTCCGAGACAAATGACAGGAGGACGGTTCCCTGCAGGCTCTaGCCATCAGGAAGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: IILPVSPKRDSETNDRRTVPCRL*PSGRGA
Trigger: TGCTCCTCTTCCTGATGGTCAGAGCCTGCAGGGAAC...CGTCCTCCTGTCATTTGTCTCGGAGTCACGTTTTGGAGAGACAGGAAGTATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp TCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAATGTATTGCTTTTATACTGGGCTGGGGGTaGGACACTGGCTGTGGGTAC +
Preference number: 4 (lower is better)
Translates to: SPTGEQPSCECIKECIAFILGWG*DTGCGY
Trigger: GTACCCACAGCCAGTGTCTCACCCCCAGCCCAGTAT...AAAAGCAATACATTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp GACACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCAAGAACCACTGGAACCTaGACTGATAGGGGACTTGGC +
Preference number: 4 (lower is better)
Translates to: DTKHCFQCPELSKSFPCPRTTGT*TDRGLG
Trigger: GCCAAGTCCCCTATCAGTTCAGGTTCCAGTGGTTCT...TGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCTCTGGAACTCCCCTCCTaGCGTGTTATGTTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: PNIAFSVQNCQSPSRAHALELPS*RVMFGG
Trigger: TCCTCCAAACATAACACGTCAGGAGGGGAGTTCCAG...AGCATGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCTTGCTATGGAGGAGCCTaGCTCACTTTCACTGTCCAC +
Preference number: 4 (lower is better)
Translates to: PNIAFSVQNCQSPSRAHACYGGA*LTFTVH
Trigger: GTGGACAGTGAAAGTGAGTCAGGCTCCTCCATAGCA...AGCATGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp TTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAAGTTGGCACTAGTGACTaGGGAGAAAGAAGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: FQWASPTGEQPSCECIKEVGTSD*GERRGP
Trigger: TGGACCCCTTCTTTCTCCGCAGTCACTAGTGCCAAC...TTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp ATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCCCCTTGTGGCTGTGGGTACGTTaGTGGGGGAGTGCTACACTG +
Preference number: 4 (lower is better)
Translates to: IQELSPSSWLWQLHQVPLWLWVR*WGSATL
Trigger: CAGTGTAGCACTCCCCCAGCAACGTACCCACAGCCA...CAAGGGGACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp GACACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCAGTGCTCCATCAGATCTaGAGCACCCAAAGCCTTACC +
Preference number: 4 (lower is better)
Translates to: DTKHCFQCPELSKSFPCPVLHQI*STQSLT
Trigger: GGTAAGGCTTTGGGTGCTGCAGATCTGATGGAGCAC...TGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp TCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAATGTATTGCTTTTTGCGCTTGCCTGGCTTaGTGTCTGACCCTGGACCTG +
Preference number: 4 (lower is better)
Translates to: SPTGEQPSCECIKECIAFCACLA*CLTLDL
Trigger: CAGGTCCAGGGTCAGACAGCAAGCCAGGCAAGCGCA...AAAAGCAATACATTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp TGTCAAAGTCCTTCCCGTGCCCATGCTTCCAATGGGCATCTCCCACAGGTGAGCAGGGTTGAGAAATCCTaGGCAGGGTTATCTTTAAGA +
Preference number: 4 (lower is better)
Translates to: CQSPSRAHASNGHLPQVSRVEKS*AGLSLR
Trigger: TCTTAAAGATAACCCTGCCCAGGATTTCTCAACCCT...GCTCACCTGTGGGAGATGCCCATTGGAAGCATGGGCACGGGAAGGACTTTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CACCCCTCGGGTTGGTTTACATATATCATTAGTTTCTCCTCTGGACGTGTCTGTGGGGGAGTGCTACACTaGCTTGGAGCTGGGGTGATA +
Preference number: 4 (lower is better)
Translates to: HPSGWFTYIISFSSGRVCGGVLH*LGAGVI
Trigger: TATCACCCCAGCTCCAAGCCAGTGTAGCACTCCCCC...ACAGACACGTCCAGAGGAGAAACTAATGATATATGTAAACCAACCCGAGGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CACCCCTCGGGTTGGTTTACATATATCATTAGTTTCTCCTCTGGACGTGTCTGTTGCTCTTCCCATCATTaGAGGGAGTGCGGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: HPSGWFTYIISFSSGRVCCSSHH*RECGCA
Trigger: AGCGCAGCCGCACTCCCTCCAATGATGGGAAGAGCA...ACAGACACGTCCAGAGGAGAAACTAATGATATATGTAAACCAACCCGAGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp TCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCTTCCAATGGGCATCTCCCACGATGAATTTTTGGACTaGCTGGATCCAGAAGACCCT +
Preference number: 4 (lower is better)
Translates to: SRTVKVLPVPMLPMGISHDEFLD*LDPEDP
Trigger: AGGGTCTTCTGGATCCAGCCAGTCCAAAAATTCATC...GTGGGAGATGCCCATTGGAAGCATGGGCACGGGAAGGACTTTGACAGTTCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CCATGCCCTTTAGGGCTCTTAAGCACTGACAGGGCCTGTCTGACTCACCCCTCGTTGGAGGACATGGGATaGTTAGAAGAATTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: PCPLGLLSTDRACLTHPSLEDMG*LEEFVL
Trigger: AAGCACAAATTCTTCTAACCATCCCATGTCCTCCAA...CGAGGGGTGAGTCAGACAGGCCCTGTCAGTGCTTAAGAGCCCTAAAGGGCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp AGACACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCTTCTCACGTTTGCTCTaGAACTCCCCTCCTGACGTG +
Preference number: 4 (lower is better)
Translates to: RHQTLLSVSRTVKVLPVPFSRLL*NSPPDV
Trigger: CACGTCAGGAGGGGAGTTCCAGAGCAAACGTGAGAA...GGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CACATGGTTTCGGCAGCAGGGTCTAGATGTATGTTTATAAATGTACCCAGCTTGGCTGGCGACTTACTGTaGCTGGGAGAACCCCGTTCG +
Preference number: 4 (lower is better)
Translates to: HMVSAAGSRCMFINVPSLAGDLL*LGEPRS
Trigger: CGAACGGGGTTCTCCCAGCCACAGTAAGTCGCCAGC...CAAGCTGGGTACATTTATAAACATACATCTAGACCCTGCTGCCGAAACCATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
3UTR CAA 72 bp ACTCCAGCAGCAGCAGCAGCAGCAAATAGGTACACGTaGACTTCATGTCCTTGCCGTCTTTCAAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: TPAAAAAANRYT*TSCPCRLSNRR
Trigger: CCTCCTGTTTGAAAGACGGCAAGGACATGAAGTCAACGTGTACCTATTTGCTGCTGCTGCTGCTGCTGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp TCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCTTCCAATGGGCATCTCCCACCTCTTCTCCATTACTTaGCGCACAAGCTTAATGGTT +
Preference number: 4 (lower is better)
Translates to: SRTVKVLPVPMLPMGISHLFSIT*RTSLMV
Trigger: AACCATTAAGCTTGTGCGTCAAGTAATGGAGAAGAG...GTGGGAGATGCCCATTGGAAGCATGGGCACGGGAAGGACTTTGACAGTTCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp TTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAACAGCTGACCAAATGCTaGTGCCCTCCAGAACTCATT +
Preference number: 4 (lower is better)
Translates to: FQWASPTGEQPSCECIKEQLTKC*CPPELI
Trigger: AATGAGTTCTGGAGGGCATCAGCATTTGGTCAGCTG...TTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CACATGGTTTCGGCAGCAGGGTCTAGATGTATGTTTATAAATGTACCCAGCTTGCCACTGGCACTGAGGTaGGAGCCCAGTCCATTCTGT +
Preference number: 4 (lower is better)
Translates to: HMVSAAGSRCMFINVPSLPLALR*EPSPFC
Trigger: ACAGAATGGACTGGGCTCTCACCTCAGTGCCAGTGG...CAAGCTGGGTACATTTATAAACATACATCTAGACCCTGCTGCCGAAACCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp TCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAATGTATTGCTTTTCCCCACTCCGCGGGGTaGGATAACCAACACTTCCAT +
Preference number: 4 (lower is better)
Translates to: SPTGEQPSCECIKECIAFPHSAG*DNQHFH
Trigger: ATGGAAGTGTTGGTTATCTCACCCCGCGGAGTGGGG...AAAAGCAATACATTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp AGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCCCCTTGCTCACCTTTCATATTCATTAAATaGCCCCCACTCCGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: SYHPQAGFGNYIRSPCSPFIFIK*PPLRGV
Trigger: CACCCCGCGGAGTGGGGGTCATTTAATGAATATGAA...AGGTGAGCAAGGGGACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CCATGCCCTTTAGGGCTCTTAAGCACTGACAGGGCCTGTCTGACTCACCCCTCGATGGACATACATCTTTaGACAACTTTGGCAATGAAG +
Preference number: 4 (lower is better)
Translates to: PCPLGLLSTDRACLTHPSMDIHL*TTLAMK
Trigger: CTTCATTGCCAAAGTTGTTCAAAGATGTATGTCCAT...CGAGGGGTGAGTCAGACAGGCCCTGTCAGTGCTTAAGAGCCCTAAAGGGCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CACATGGTTTCGGCAGCAGGGTCTAGATGTATGTTTATAAATGTACCCAGCTTGTCTGAGACACCTTGCTaGAGTCCTCCCCATGGCCCA +
Preference number: 4 (lower is better)
Translates to: HMVSAAGSRCMFINVPSLSETPC*SPPHGP
Trigger: TGGGCCATGGGGAGGACTTCAGCAAGGTGTCTCAGA...CAAGCTGGGTACATTTATAAACATACATCTAGACCCTGCTGCCGAAACCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp AGACACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCAGAATGCCCAGAACTTaGGGAATCTCGAACAGGGGT +
Preference number: 4 (lower is better)
Translates to: RHQTLLSVSRTVKVLPVPRMPRT*GISNRG
Trigger: ACCCCTGTTCGAGATTCCTCAAGTTCTGGGCATTCT...GGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp GACACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCAGAGGAGGAGGAAGAATaGCTATGGTGGCTTTTGCTG +
Preference number: 4 (lower is better)
Translates to: DTKHCFQCPELSKSFPCPEEEEE*LWWLLL
Trigger: CAGCAAAAGCCACCATAGTCATTCTTCCTCCTCCTC...TGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CACATGGTTTCGGCAGCAGGGTCTAGATGTATGTTTATAAATGTACCCAGCTTGGCCTCCGGGAGGCCTTaGATGGGAAGGGGATATGTT +
Preference number: 4 (lower is better)
Translates to: HMVSAAGSRCMFINVPSLASGRP*MGRGYV
Trigger: AACATATCCCCTTCCCATTCAAGGCCTCCCGGAGGC...CAAGCTGGGTACATTTATAAACATACATCTAGACCCTGCTGCCGAAACCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp AATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCGCGTCACTTTGGCTTTaGTGCTCGGGGAGCCTCCGT +
Preference number: 4 (lower is better)
Translates to: NPIQELSPSSWLWQLHQVASLWL*CSGSLR
Trigger: ACGGAGGCTCCCCGAGCATCAAAGCCAAAGTGACGC...GACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp GACACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCAATGAGAGACAGTaGTGGGGTGTCAGCCTGTAT +
Preference number: 4 (lower is better)
Translates to: DTKHCFQCPELSKSFPCPCNERQ*WGVSLY
Trigger: ATACAGGCTGACACCCCAGCACTGTCTCTCATTGCA...TGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp TGTCAAAGTCCTTCCCGTGCCCATGCTTCCAATGGGCATCTCCCACAGGTGAGCCCGTTCCCTGTGATTTaGAACAAACTGGTAAGAATT +
Preference number: 4 (lower is better)
Translates to: CQSPSRAHASNGHLPQVSPFPVI*NKLVRI
Trigger: AATTCTTACCAGTTTGTTGCAAATCACAGGGAACGG...GCTCACCTGTGGGAGATGCCCATTGGAAGCATGGGCACGGGAAGGACTTTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp CACCCCTCGGGTTGGTTTACATATATCATTAGTTTCTCCTCTGGACGTGTCTGTGGTGGTTCTTGGTGTTaGCGGCCATCGAAGAGACAG +
Preference number: 4 (lower is better)
Translates to: HPSGWFTYIISFSSGRVCGGSWC*RPSKRQ
Trigger: CTGTCTCTTCGATGGCCGGCAACACCAAGAACCACC...ACAGACACGTCCAGAGGAGAAACTAATGATATATGTAAACCAACCCGAGGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp TTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAACCGGAAGAGGAGTTCTaGCTTTCTAAAGGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: FQWASPTGEQPSCECIKEPEEEF*LSKGLL
Trigger: AAGCAGCCCTTTAGAAAGGCAGAACTCCTCTTCCGG...TTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp CACCCCTCGGGTTGGTTTACATATATCATTAGTTTCTCCTCTGGACGTGTCTGTCTTCCCCTCAGTGTCTaGCTTCTTCCGCTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: HPSGWFTYIISFSSGRVCLPLSV*LLPLWR
Trigger: CCTCCAAAGCGGAAGAAGGCAGACACTGAGGGGAAG...ACAGACACGTCCAGAGGAGAAACTAATGATATATGTAAACCAACCCGAGGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp CACCCCTCGGGTTGGTTTACATATATCATTAGTTTCTCCTCTGGACGTGTCTGTGAGATCGTCCTGAACTaGCTGGGGATTTGGACCCAC +
Preference number: 4 (lower is better)
Translates to: HPSGWFTYIISFSSGRVCEIVLN*LGIWTH
Trigger: GTGGGTCCAAATCCCCAGGCAGTTCAGGACGATCTC...ACAGACACGTCCAGAGGAGAAACTAATGATATATGTAAACCAACCCGAGGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp ATAATACTTCCTGTCTCTCCAAAACGTGACTCCGAGACAAATGACAGGAGGACGGAGATCGTCCTGAACTaGCTGGGGATTTGGACCCAC +
Preference number: 4 (lower is better)
Translates to: IILPVSPKRDSETNDRRTEIVLN*LGIWTH
Trigger: GTGGGTCCAAATCCCCAGGCAGTTCAGGACGATCTC...CGTCCTCCTGTCATTTGTCTCGGAGTCACGTTTTGGAGAGACAGGAAGTATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp ATAATACTTCCTGTCTCTCCAAAACGTGACTCCGAGACAAATGACAGGAGGACGAGGCTTGGTTTATCCTaGCGCTTCTCCTCCACCCCT +
Preference number: 4 (lower is better)
Translates to: IILPVSPKRDSETNDRRTRLGLS*RFSSTP
Trigger: AGGGGTGGAGGAGAAGCGGCAGGATAAACCAAGCCT...CGTCCTCCTGTCATTTGTCTCGGAGTCACGTTTTGGAGAGACAGGAAGTATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092735.12
CDS-3UTR CCA 90 bp CCGTGCCCATGCTTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAAACGATCAGTCATTGCTaGCAAAGATGTTACTTTGAG +
Preference number: 4 (lower is better)
Translates to: PCPCFQWASPTGEQPSCETISHC*QRCYFE
Trigger: CTCAAAGTAACATCTTTGCCAGCAATGACTGATCGT...TTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAAGCATGGGCACGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCTCTGCTGTACAAGCTCTaGACAGCTCACAGGATTCTC +
Preference number: 4 (lower is better)
Translates to: PNIAFSVQNCQSPSRAHALLYKL*TAHRIL
Trigger: GAGAATCCTGTGAGCTGTCCAGAGCTTGTACAGCAG...AGCATGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp TTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAAGGACACACTTCAAACTaGAGGAGCCCAGGAGAATCT +
Preference number: 4 (lower is better)
Translates to: FQWASPTGEQPSCECIKEGHTSN*RSPGES
Trigger: AGATTCTCCTGGGCTCCTCCAGTTTGAAGTGTGTCC...TTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp GACACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCAAATGAGAGACAGTGCTaGGGTGTCAGCCTGTATGGT +
Preference number: 4 (lower is better)
Translates to: DTKHCFQCPELSKSFPCPNERQC*GVSLYG
Trigger: ACCATACAGGCTGACACCCCAGCACTGTCTCTCATT...TGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp TTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAAACACTGGCTTGGAGCTaGGGTGATATGAGGTGTATC +
Preference number: 4 (lower is better)
Translates to: FQWASPTGEQPSCECIKETLAWS*GDMRCI
Trigger: GATACACCTCATATCACCCCAGCTCCAAGCCAGTGT...TTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp ACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCGCTGCCCTTAAATTTTaGCTCCCCATTGTCACCTCC +
Preference number: 4 (lower is better)
Translates to: TKHCFQCPELSKSFPCPCAALKF*LPIVTS
Trigger: GGAGGTGACAATGGGGAGCCAAAATTTAAGGGCAGC...GCATGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCTCTTGAGGTTTCATCTTaGTACTGCTGGACCCACTGC +
Preference number: 4 (lower is better)
Translates to: PNIAFSVQNCQSPSRAHALEVSS*YCWTHC
Trigger: GCAGTGGGTCCAGCAGTACCAAGATGAAACCTCAAG...AGCATGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp AGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCCCCTTGCTCACCTCTTGAGGTTTCATCTTaGTACTGCTGGACCCACTGC +
Preference number: 4 (lower is better)
Translates to: SYHPQAGFGNYIRSPCSPLEVSS*YCWTHC
Trigger: GCAGTGGGTCCAGCAGTACCAAGATGAAACCTCAAG...AGGTGAGCAAGGGGACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp TCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCTTCCAATGGGCATCTCCCACTGGGAGATTTCCCTTTaGAACTGCCATGTTGATTCT +
Preference number: 4 (lower is better)
Translates to: SRTVKVLPVPMLPMGISHWEISL*NCHVDS
Trigger: AGAATCAACATGGCAGTTCCAAAGGGAAATCTCCCA...GTGGGAGATGCCCATTGGAAGCATGGGCACGGGAAGGACTTTGACAGTTCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp ATAATACTTCCTGTCTCTCCAAAACGTGACTCCGAGACAAATGACAGGAGGACGGAGGTGTCCCAGGCTTaGTTTATCCTGCCGCTTCTC +
Preference number: 4 (lower is better)
Translates to: IILPVSPKRDSETNDRRTEVSQA*FILPLL
Trigger: GAGAAGCGGCAGGATAAACCAAGCCTGGGACACCTC...CGTCCTCCTGTCATTTGTCTCGGAGTCACGTTTTGGAGAGACAGGAAGTATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092735.12
CDS-3UTR TCA 90 bp ACAACCAACCACATGGTTTCGGCAGCAGGGTCTAGATGTATGTTTATAAATGTACAGTGCCACTGGCACTaGGGTGAGAGCCCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: TTNHMVSAAGSRCMFINVQCHWH*GESPVH
Trigger: ATGGACTGGGCTCTCACCTCAGTGCCAGTGGCACTG...TACATTTATAAACATACATCTAGACCCTGCTGCCGAAACCATGTGGTTGGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp GGAATGGCATCAGCTCTCCTGCAAACAAAATGCTGGGATGTAGACTTTTGGCACTTCATATTCATTAAATaGCCCCCACTCCGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: GMASALLQTKCWDVDFWHFIFIK*PPLRGV
Trigger: CACCCCGCGGAGTGGGGGTCATTTAATGAATATGAA...GTGCCAAAAGTCTACATCCCAGCATTTTGTTTGCAGGAGAGCTGATGCCATTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp AGACACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCGTAAGAATTGGGTTCTaGGACACCTTGCTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: RHQTLLSVSRTVKVLPVPVRIGF*DTLLKS
Trigger: GGACTTCAGCAAGGTGTCTCAGAACCCAATTCTTAC...GGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CACATGGTTTCGGCAGCAGGGTCTAGATGTATGTTTATAAATGTACCCAGCTTGTGGGCCAATGCTGTCTaGACTGGACAGTCGGACCAT +
Preference number: 4 (lower is better)
Translates to: HMVSAAGSRCMFINVPSLWANAV*TGQSDH
Trigger: ATGGTCCGACTGTCCAGTTCAGACAGCATTGGCCCA...CAAGCTGGGTACATTTATAAACATACATCTAGACCCTGCTGCCGAAACCATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp AGACACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCCTATTAGAAGAACTGTaGGATGGGGACTTCCCCTCA +
Preference number: 4 (lower is better)
Translates to: RHQTLLSVSRTVKVLPVPLLEEL*DGDFPS
Trigger: TGAGGGGAAGTCCCCATCTCACAGTTCTTCTAATAG...GGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp TTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAACATACATACTGCCACTaGGCTTGGAACTTGATGAGC +
Preference number: 4 (lower is better)
Translates to: FQWASPTGEQPSCECIKEHTYCH*AWNLMS
Trigger: GCTCATCAAGTTCCAAGCTCAGTGGCAGTATGTATG...TTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CACCCCTCGGGTTGGTTTACATATATCATTAGTTTCTCCTCTGGACGTGTCTGTAGAACCACTGGAACCTaGACTGATAGGGGACTTGGC +
Preference number: 4 (lower is better)
Translates to: HPSGWFTYIISFSSGRVCRTTGT*TDRGLG
Trigger: GCCAAGTCCCCTATCAGTTCAGGTTCCAGTGGTTCT...ACAGACACGTCCAGAGGAGAAACTAATGATATATGTAAACCAACCCGAGGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CCACCAGGCGAGCCTTGCTACCTGCCTCCTACTGTTCTGAACCATAACCTTCATGCTTCAATTTATCTATaGCAGCTGTCAAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: PPGEPCYLPPTVLNHNLHASIYL*QLSRKA
Trigger: AGCCTTCCTTGACAGCTGTCATAGATAAATTGAAGC...ATGAAGGTTATGGTTCAGAACAGTAGGAGGCAGGTAGCAAGGCTCGCCTGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp ATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCCCCTTGCTGGAACTCCCCTCCTaGCGTGTTATGTTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: IQELSPSSWLWQLHQVPLLELPS*RVMFGG
Trigger: TCCTCCAAACATAACACGTCAGGAGGGGAGTTCCAG...CAAGGGGACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CAGGGATTGATTATGTTTTGTATACTGACATCTGCTGGGACCAGTGAGGACACTTTTCAAACAGGAGGGTaGGCACACCTGGATGGGAGG +
Preference number: 4 (lower is better)
Translates to: QGLIMFCILTSAGTSEDTFQTGG*AHLDGR
Trigger: CCTCCCATCCAGGTGTGCTCACCCTCCTGTTTGAAA...AGTGTCCTCACTGGTCCCAGCAGATGTCAGTATACAAAACATAATCAATCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092735.12
CDS-3UTR GCA 90 bp ATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCCCCTTGGTTGGCACTAGTGACTaGGGAGAAAGAAGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: IQELSPSSWLWQLHQVPLVGTSD*GERRGP
Trigger: TGGACCCCTTCTTTCTCCGCAGTCACTAGTGCCAAC...CAAGGGGACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp CCATGCCCTTTAGGGCTCTTAAGCACTGACAGGGCCTGTCTGACTCACCCCTCGCAGTTTCTGAACAAATaGTTTAGATACTGGAATTGG +
Preference number: 4 (lower is better)
Translates to: PCPLGLLSTDRACLTHPSQFLNK*FRYWNW
Trigger: CCAATTCCAGTATCTAAAGCATTTGTTCAGAAACTG...CGAGGGGTGAGTCAGACAGGCCCTGTCAGTGCTTAAGAGCCCTAAAGGGCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp AGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCCCCTTGCTCACCTGTCTTCAACTGTCTCTaGAATGAGAGACAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SYHPQAGFGNYIRSPCSPVFNCL*NERQCW
Trigger: CCAGCACTGTCTCTCATTGCAGAGACAGTTGAAGAC...AGGTGAGCAAGGGGACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp CACCACCCCTCTCCCCTTAAGCAAGTAATTTATTCATTGCTTTCTGGCAAAGAAACGTTGCTGGGGGAGTaGTACACTGGCTTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: HHPSPLKQVIYSLLSGKETLLGE*YTGLEL
Trigger: CAGCTCCAAGCCAGTGTAGCACTCCCCCAGCAACGT...TTCTTTGCCAGAAAGCAATGAATAAATTACTTGCTTAAGGGGAGAGGGGTGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp ACAACCAACCACATGGTTTCGGCAGCAGGGTCTAGATGTATGTTTATAAATGTATGCGCTTGCCTGGCTTaGTGTCTGACCCTGGACCTG +
Preference number: 4 (lower is better)
Translates to: TTNHMVSAAGSRCMFINVCACLA*CLTLDL
Trigger: CAGGTCCAGGGTCAGACAGCAAGCCAGGCAAGCGCA...TACATTTATAAACATACATCTAGACCCTGCTGCCGAAACCATGTGGTTGGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp TTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAATTGGAGGCTTATCCTTaGTCTTCCCATCATTGGAGG +
Preference number: 4 (lower is better)
Translates to: FQWASPTGEQPSCECIKELEAYP*SSHHWR
Trigger: CCTCCAATGATGGGAAGAGCAAGGATAAGCCTCCAA...TTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp TCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAATGTATTGCTTTTTGTGAGAGGAGGGCTTaGCCACCATCACTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: SPTGEQPSCECIKECIAFCERRA*PPSLSL
Trigger: AAGGGACAGTGATGGTGGGCAAGCCCTCCTCTCACA...AAAAGCAATACATTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp TTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAATATGGTGGCTTTTGCTaGCAGAGGAAGACACAGAAC +
Preference number: 4 (lower is better)
Translates to: FQWASPTGEQPSCECIKEYGGFC*QRKTQN
Trigger: GTTCTGTGTCTTCCTCTGGCAGCAAAAGCCACCATA...TTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp AGACACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCGGGGAGCCTCCGTCGTaGTTGCTGATAATGATTTTT +
Preference number: 4 (lower is better)
Translates to: RHQTLLSVSRTVKVLPVPGEPPS*LLIMIF
Trigger: AAAAATCATTATCAGCAAGCACGACGGAGGCTCCCC...GGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp CAGGGATTGATTATGTTTTGTATACTGACATCTGCTGGGACCAGTGAGGACACTGGAGAACCCCGTTCGTaGTTTGGAGTGGAACCACTG +
Preference number: 4 (lower is better)
Translates to: QGLIMFCILTSAGTSEDTGEPRS*FGVEPL
Trigger: CAGTGGTTCCACTCCAAAGCACGAACGGGGTTCTCC...AGTGTCCTCACTGGTCCCAGCAGATGTCAGTATACAAAACATAATCAATCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp GGAATGGCATCAGCTCTCCTGCAAACAAAATGCTGGGATGTAGACTTTTGGCACCTGCTGTACAAGCTCTaGACAGCTCACAGGATTCTC +
Preference number: 4 (lower is better)
Translates to: GMASALLQTKCWDVDFWHLLYKL*TAHRIL
Trigger: GAGAATCCTGTGAGCTGTCCAGAGCTTGTACAGCAG...GTGCCAAAAGTCTACATCCCAGCATTTTGTTTGCAGGAGAGCTGATGCCATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp ATTCCTATGGTGTCTGAACCCTGTGAAAAACCTCCAAAGATAATAGTTTTGGTTGGTCATGCCATACCCTaGGCTGCTAGCCGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: IPMVSEPCEKPPKIIVLVGHAIP*AASRGQ
Trigger: CTGCCCCCGGCTAGCAGCCCAGGGTATGGCATGACC...AACCAAAACTATTATCTTTGGAGGTTTTTCACAGGGTTCAGACACCATAGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CACCACCCCTCTCCCCTTAAGCAAGTAATTTATTCATTGCTTTCTGGCAAAGAACATCGAAGAGACAGGTaGCGGCGTGTGATGAGGAGG +
Preference number: 4 (lower is better)
Translates to: HHPSPLKQVIYSLLSGKEHRRDR*RRVMRR
Trigger: CCTCCTCATCACACGCCGCCACCTGTCTCTTCGATG...TTCTTTGCCAGAAAGCAATGAATAAATTACTTGCTTAAGGGGAGAGGGGTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp AATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCGCATCGGGTGGTTCTTaGTGTTGCCGGCCATCGAAG +
Preference number: 4 (lower is better)
Translates to: NPIQELSPSSWLWQLHQVASGGS*CCRPSK
Trigger: CTTCGATGGCCGGCAACACCAAGAACCACCCGATGC...GACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CACCCCTCGGGTTGGTTTACATATATCATTAGTTTCTCCTCTGGACGTGTCTGTCTTCAGTCTGGTGCTTaGGTTTGTCAGGTGGGACTC +
Preference number: 4 (lower is better)
Translates to: HPSGWFTYIISFSSGRVCLQSGA*VCQVGL
Trigger: GAGTCCCACCTGACAAACCCAAGCACCAGACTGAAG...ACAGACACGTCCAGAGGAGAAACTAATGATATATGTAAACCAACCCGAGGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp GGAATGGCATCAGCTCTCCTGCAAACAAAATGCTGGGATGTAGACTTTTGGCACGTGAGTCGACATCCATaGAAAAGAGCTCCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: GMASALLQTKCWDVDFWHVSRHP*KRAPSG
Trigger: TCCAGAGGGAGCTCTTTTCCATGGATGTCGACTCAC...GTGCCAAAAGTCTACATCCCAGCATTTTGTTTGCAGGAGAGCTGATGCCATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CACCCCTCGGGTTGGTTTACATATATCATTAGTTTCTCCTCTGGACGTGTCTGTAGTGCTACACTGGCTTaGAGCTGGGGTGATATGAGG +
Preference number: 4 (lower is better)
Translates to: HPSGWFTYIISFSSGRVCSATLA*SWGDMR
Trigger: CCTCATATCACCCCAGCTCCAAGCCAGTGTAGCACT...ACAGACACGTCCAGAGGAGAAACTAATGATATATGTAAACCAACCCGAGGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CAGGGATTGATTATGTTTTGTATACTGACATCTGCTGGGACCAGTGAGGACACTCCATCCTCTGAATACTaGGCTGGGGGTGAGACACTG +
Preference number: 4 (lower is better)
Translates to: QGLIMFCILTSAGTSEDTPSSEY*AGGETL
Trigger: CAGTGTCTCACCCCCAGCCCAGTATTCAGAGGATGG...AGTGTCCTCACTGGTCCCAGCAGATGTCAGTATACAAAACATAATCAATCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp ATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCCCCTTGAACAGGGGTGCCAATTaGTGGGCAGTCATCACTCGT +
Preference number: 4 (lower is better)
Translates to: IQELSPSSWLWQLHQVPLNRGAN*WAVITR
Trigger: ACGAGTGATGACTGCCCACCAATTGGCACCCCTGTT...CAAGGGGACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp TTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAAGATCCAGAAGACCCTTaGCTAGCATACATACTGCCA +
Preference number: 4 (lower is better)
Translates to: FQWASPTGEQPSCECIKEDPEDP*LAYILP
Trigger: TGGCAGTATGTATGCTAGCCAAGGGTCTTCTGGATC...TTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CACATGGTTTCGGCAGCAGGGTCTAGATGTATGTTTATAAATGTACCCAGCTTGCATCTGACTGTCTATTaGATCCTCACCCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: HMVSAAGSRCMFINVPSLHLTVY*ILTPRP
Trigger: GGGCCTGGGGGTGAGGATCCAATAGACAGTCAGATG...CAAGCTGGGTACATTTATAAACATACATCTAGACCCTGCTGCCGAAACCATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp TTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAAAGGATCTCTCTGCTATaGAGGAGCCTGACTCACTTT +
Preference number: 4 (lower is better)
Translates to: FQWASPTGEQPSCECIKERISLL*RSLTHF
Trigger: AAAGTGAGTCAGGCTCCTCCATAGCAGAGAGATCCT...TTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCTAGGATCTCTCTGCTATaGAGGAGCCTGACTCACTTT +
Preference number: 4 (lower is better)
Translates to: PNIAFSVQNCQSPSRAHARISLL*RSLTHF
Trigger: AAAGTGAGTCAGGCTCCTCCATAGCAGAGAGATCCT...AGCATGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp GGAATGGCATCAGCTCTCCTGCAAACAAAATGCTGGGATGTAGACTTTTGGCACCTCAGTGCTGTACTCTaGAAGTGGTCGGATACCATC +
Preference number: 4 (lower is better)
Translates to: GMASALLQTKCWDVDFWHLSAVL*KWSDTI
Trigger: GATGGTATCCGACCACTTCCAGAGTACAGCACTGAG...GTGCCAAAAGTCTACATCCCAGCATTTTGTTTGCAGGAGAGCTGATGCCATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CATTTTCCCAACCTAGTTTCTAAGATAATACTTCCTGTCTCTCCAAAACGTGACCAGTGCCACTGGCACTaGGGTGAGAGCCCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: HFPNLVSKIILPVSPKRDQCHWH*GESPVH
Trigger: ATGGACTGGGCTCTCACCTCAGTGCCAGTGGCACTG...GTCACGTTTTGGAGAGACAGGAAGTATTATCTTAGAAACTAGGTTGGGAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp AAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGCCCCACTCCGCGGGGTaGGATAACCAACACTTCCAT +
Preference number: 4 (lower is better)
Translates to: KIQFKSYHPQAGFGNYIRPHSAG*DNQHFH
Trigger: ATGGAAGTGTTGGTTATCTCACCCCGCGGAGTGGGG...CCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCTGCTGAAAAGATACACTaGAGCGAGATTCTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: PNIAFSVQNCQSPSRAHAAEKIH*SEILRE
Trigger: CTCTCTCAGAATCTCGCTTCAGTGTATCTTTTCAGC...AGCATGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp TTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAATCATTCACAGGGTGCTaGAAAGATACACTGAAGCGA +
Preference number: 4 (lower is better)
Translates to: FQWASPTGEQPSCECIKESFTGC*KDTLKR
Trigger: TCGCTTCAGTGTATCTTTTCAGCACCCTGTGAATGA...TTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp AGGAAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCTCTGAGACACCTTGCTaGAGTCCTCCCCATGGCCCA +
Preference number: 4 (lower is better)
Translates to: RKIQFKSYHPQAGFGNYISETPC*SPPHGP
Trigger: TGGGCCATGGGGAGGACTTCAGCAAGGTGTCTCAGA...GATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp ACAACCAACCACATGGTTTCGGCAGCAGGGTCTAGATGTATGTTTATAAATGTAGGCTTGGAGCTGGGGTaGTATGAGGTGTATCCAGCG +
Preference number: 4 (lower is better)
Translates to: TTNHMVSAAGSRCMFINVGLELG*YEVYPA
Trigger: CGCTGGATACACCTCATATCACCCCAGCTCCAAGCC...TACATTTATAAACATACATCTAGACCCTGCTGCCGAAACCATGTGGTTGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CCACCAGGCGAGCCTTGCTACCTGCCTCCTACTGTTCTGAACCATAACCTTCATGAGATGCAAATCCTTTaGAATCATCATTATCCCCAC +
Preference number: 4 (lower is better)
Translates to: PPGEPCYLPPTVLNHNLHEMQIL*NHHYPH
Trigger: GTGGGGATAATGATGATTTCAAAGGATTTGCATCTC...ATGAAGGTTATGGTTCAGAACAGTAGGAGGCAGGTAGCAAGGCTCGCCTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp GGAAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCACTTACTCAGCCTCTCTaGGTCCTCGGTTTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: GKSNSRVITLKLALAITSLTQPL*VLGFPL
Trigger: CAGGGGGAAACCGAGGACTCAGAGAGGCTGAGTAAG...TGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp TTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAAACTTTGAGAGCCTTCTaGAATGTCTCCAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: FQWASPTGEQPSCECIKETLRAF*NVSKQL
Trigger: CAGCTGTTTGGAGACATTGCAGAAGGCTCTCAAAGT...TTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp CAGGGATTGATTATGTTTTGTATACTGACATCTGCTGGGACCAGTGAGGACACTGTTGGCACTAGTGACTaGGGAGAAAGAAGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: QGLIMFCILTSAGTSEDTVGTSD*GERRGP
Trigger: TGGACCCCTTCTTTCTCCGCAGTCACTAGTGCCAAC...AGTGTCCTCACTGGTCCCAGCAGATGTCAGTATACAAAACATAATCAATCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp TTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAAAGCCTTCAGATTTACTaGTTTTCACCTTGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: FQWASPTGEQPSCECIKESLQIY*FSPCLR
Trigger: CCTCAGGCAAGGTGAAAAGCAGTAAATCTGAAGGCT...TTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp CACCCCTCGGGTTGGTTTACATATATCATTAGTTTCTCCTCTGGACGTGTCTGTCACTTTTCTCACGTTTaGTCTGGAACTCCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: HPSGWFTYIISFSSGRVCHFSHV*SGTPLL
Trigger: CAGGAGGGGAGTTCCAGAGCAAACGTGAGAAAAGTG...ACAGACACGTCCAGAGGAGAAACTAATGATATATGTAAACCAACCCGAGGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp TTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCCCCTTGCTGGTTAAATTTTGCATaGAGCCGTTCCAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: FKSYHPQAGFGNYIRSPCWLNFA*SRSRRE
Trigger: CTCCCTCCTGGAACGGCTCCATGCAAAATTTAACCA...GCAAGGGGACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CAGGGATTGATTATGTTTTGTATACTGACATCTGCTGGGACCAGTGAGGACACTGCAGTGCTGCTGACCTaGAAGAGCAGCGTAAAATCG +
Preference number: 4 (lower is better)
Translates to: QGLIMFCILTSAGTSEDTAVLLT*KSSVKS
Trigger: CGATTTTACGCTGCTCTTCCAGGTCAGCAGCACTGC...AGTGTCCTCACTGGTCCCAGCAGATGTCAGTATACAAAACATAATCAATCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp TTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCCCCTTGCAGTGGTACCACTCATTaGGTTGTTGCCTGTGGTCAT +
Preference number: 4 (lower is better)
Translates to: FKSYHPQAGFGNYIRSPCSGTTH*VVACGH
Trigger: ATGACCACAGGCAACAACCCAATGAGTGGTACCACT...GCAAGGGGACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp GGAATGGCATCAGCTCTCCTGCAAACAAAATGCTGGGATGTAGACTTTTGGCACCGGAAAGGTGTTGGTTaGTGTAGTGGTACCACTCAT +
Preference number: 4 (lower is better)
Translates to: GMASALLQTKCWDVDFWHRKGVG*CSGTTH
Trigger: ATGAGTGGTACCACTACACCAACCAACACCTTTCCG...GTGCCAAAAGTCTACATCCCAGCATTTTGTTTGCAGGAGAGCTGATGCCATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CACCCCTCGGGTTGGTTTACATATATCATTAGTTTCTCCTCTGGACGTGTCTGTCAATGCTGTCTGAACTaGACAGTCGGACCATCCTCT +
Preference number: 4 (lower is better)
Translates to: HPSGWFTYIISFSSGRVCQCCLN*TVGPSS
Trigger: AGAGGATGGTCCGACTGTCCAGTTCAGACAGCATTG...ACAGACACGTCCAGAGGAGAAACTAATGATATATGTAAACCAACCCGAGGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp TCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAATGTATTGCTTTTAACAGGGGTGCCAATTaGTGGGCAGTCATCACTCGT +
Preference number: 4 (lower is better)
Translates to: SPTGEQPSCECIKECIAFNRGAN*WAVITR
Trigger: ACGAGTGATGACTGCCCACCAATTGGCACCCCTGTT...AAAAGCAATACATTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CACCCCTCGGGTTGGTTTACATATATCATTAGTTTCTCCTCTGGACGTGTCTGTGCTGCCCTTAAATTTTaGCTCCCCATTGTCACCTCC +
Preference number: 4 (lower is better)
Translates to: HPSGWFTYIISFSSGRVCAALKF*LPIVTS
Trigger: GGAGGTGACAATGGGGAGCCAAAATTTAAGGGCAGC...ACAGACACGTCCAGAGGAGAAACTAATGATATATGTAAACCAACCCGAGGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CACCCCTCGGGTTGGTTTACATATATCATTAGTTTCTCCTCTGGACGTGTCTGTAGAAGAACTGTGAGATaGGGACTTCCCCTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: HPSGWFTYIISFSSGRVCRRTVR*GLPLSV
Trigger: GACACTGAGGGGAAGTCCCCATCTCACAGTTCTTCT...ACAGACACGTCCAGAGGAGAAACTAATGATATATGTAAACCAACCCGAGGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CACCCCTCGGGTTGGTTTACATATATCATTAGTTTCTCCTCTGGACGTGTCTGTTCACCTTGCCTGAGGTaGAAGCAGAAGCTAAGGAAG +
Preference number: 4 (lower is better)
Translates to: HPSGWFTYIISFSSGRVCSPCLR*KQKLRK
Trigger: CTTCCTTAGCTTCTGCTTCCACCTCAGGCAAGGTGA...ACAGACACGTCCAGAGGAGAAACTAATGATATATGTAAACCAACCCGAGGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp ATAATACTTCCTGTCTCTCCAAAACGTGACTCCGAGACAAATGACAGGAGGACGTCACCTTGCCTGAGGTaGAAGCAGAAGCTAAGGAAG +
Preference number: 4 (lower is better)
Translates to: IILPVSPKRDSETNDRRTSPCLR*KQKLRK
Trigger: CTTCCTTAGCTTCTGCTTCCACCTCAGGCAAGGTGA...CGTCCTCCTGTCATTTGTCTCGGAGTCACGTTTTGGAGAGACAGGAAGTATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp TTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAAACTGTCCACATTCTGTaGTGTATATGCTGGCGACTT +
Preference number: 4 (lower is better)
Translates to: FQWASPTGEQPSCECIKETVHIL*CICWRL
Trigger: AAGTCGCCAGCATATACACCACAGAATGTGGACAGT...TTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CACCCCTCGGGTTGGTTTACATATATCATTAGTTTCTCCTCTGGACGTGTCTGTCTCAGTGCTGTACTCTaGAAGTGGTCGGATACCATC +
Preference number: 4 (lower is better)
Translates to: HPSGWFTYIISFSSGRVCLSAVL*KWSDTI
Trigger: GATGGTATCCGACCACTTCCAGAGTACAGCACTGAG...ACAGACACGTCCAGAGGAGAAACTAATGATATATGTAAACCAACCCGAGGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp ACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCTTTCGACCAGTTCTCTaGCTTCATGCTGTGAGACTT +
Preference number: 4 (lower is better)
Translates to: TKHCFQCPELSKSFPCPCFRPVL*LHAVRL
Trigger: AAGTCTCACAGCATGAAGCCAGAGAACTGGTCGAAA...GCATGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp ATTGCCCAGGGATTGATTATGTTTTGTATACTGACATCTGCTGGGACCAGTGAGATGTCTCCAAACAGCTaGCCAAATGCTGATGCCCTC +
Preference number: 4 (lower is better)
Translates to: IAQGLIMFCILTSAGTSEMSPNS*PNADAL
Trigger: GAGGGCATCAGCATTTGGTCAGCTGTTTGGAGACAT...CTCACTGGTCCCAGCAGATGTCAGTATACAAAACATAATCAATCCCTGGGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CACATGGTTTCGGCAGCAGGGTCTAGATGTATGTTTATAAATGTACCCAGCTTGATGTCTCCAAACAGCTaGCCAAATGCTGATGCCCTC +
Preference number: 4 (lower is better)
Translates to: HMVSAAGSRCMFINVPSLMSPNS*PNADAL
Trigger: GAGGGCATCAGCATTTGGTCAGCTGTTTGGAGACAT...CAAGCTGGGTACATTTATAAACATACATCTAGACCCTGCTGCCGAAACCATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp ATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCCCCTTGAGGGTCAGGATCCTTTaGCAGCTCAAACTGAGTGAT +
Preference number: 4 (lower is better)
Translates to: IQELSPSSWLWQLHQVPLRVRIL*QLKLSD
Trigger: ATCACTCAGTTTGAGCTGTCAAAGGATCCTGACCCT...CAAGGGGACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CAGATCCCAAACGGAATCATCAGGAATGGCACAGTGCAGGTGGTGAAATCAAAGACTGAAGCGAGATTCTaGGAGAGGACACACTTCAAA +
Preference number: 4 (lower is better)
Translates to: QIPNGIIRNGTVQVVKSKTEARF*ERTHFK
Trigger: TTTGAAGTGTGTCCTCTCTCAGAATCTCGCTTCAGT...CTTTGATTTCACCACCTGCACTGTGCCATTCCTGATGATTCCGTTTGGGATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp GACACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCAAAACATAGGGTTCTGTaGGTCGACATCCATGGAAAA +
Preference number: 4 (lower is better)
Translates to: DTKHCFQCPELSKSFPCPKHRVL*VDIHGK
Trigger: TTTTCCATGGATGTCGACTCACAGAACCCTATGTTT...TGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp AGGAAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCGTCAGTAAAGGACTCTaGCTCCCACTGTGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: RKIQFKSYHPQAGFGNYIVSKGL*LPLWCS
Trigger: GGAGCACCACAGTGGGAGTCAGAGTCCTTTACTGAC...GATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp TCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAATGTATTGCTTTTGAGGAGGAGGAAGAATaGCTATGGTGGCTTTTGCTG +
Preference number: 4 (lower is better)
Translates to: SPTGEQPSCECIKECIAFEEEEE*LWWLLL
Trigger: CAGCAAAAGCCACCATAGTCATTCTTCCTCCTCCTC...AAAAGCAATACATTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp ATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCCCCTTGCTAGTTCCTGACACATaGGAACCACTGGAACCTGAA +
Preference number: 4 (lower is better)
Translates to: IQELSPSSWLWQLHQVPLLVPDT*EPLEPE
Trigger: TTCAGGTTCCAGTGGTTCTCATGTGTCAGGAACTAG...CAAGGGGACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp GACACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCAGCTTCAATTTATCTATaGCAGCTGTCAAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: DTKHCFQCPELSKSFPCPASIYL*QLSRKA
Trigger: AGCCTTCCTTGACAGCTGTCATAGATAAATTGAAGC...TGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CACCACCCCTCTCCCCTTAAGCAAGTAATTTATTCATTGCTTTCTGGCAAAGAATGCTATGGAGGAGCCTaGCTCACTTTCACTGTCCAC +
Preference number: 4 (lower is better)
Translates to: HHPSPLKQVIYSLLSGKECYGGA*LTFTVH
Trigger: GTGGACAGTGAAAGTGAGTCAGGCTCCTCCATAGCA...TTCTTTGCCAGAAAGCAATGAATAAATTACTTGCTTAAGGGGAGAGGGGTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CATTTTCCCAACCTAGTTTCTAAGATAATACTTCCTGTCTCTCCAAAACGTGACCTTACTCAGCCTCTCTaGGTCCTCGGTTTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: HFPNLVSKIILPVSPKRDLTQPL*VLGFPL
Trigger: CAGGGGGAAACCGAGGACTCAGAGAGGCTGAGTAAG...GTCACGTTTTGGAGAGACAGGAAGTATTATCTTAGAAACTAGGTTGGGAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp CTGTTTCTCCAAAAAGGTCCGACTGTGTGCTACACGGTAGCAAGGGTTATCTTCACATGTGTTGAGTCTTaGACATCCATCACCACACAC +
Preference number: 4 (lower is better)
Translates to: LFLQKGPTVCYTVARVIFTCVES*TSITTH
Trigger: GTGTGTGGTGATGGATGTGCAAGACTCAACACATGT...GAAGATAACCCTTGCTACCGTGTAGCACACAGTCGGACCTTTTTGGAGAAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp CACATGGTTTCGGCAGCAGGGTCTAGATGTATGTTTATAAATGTACCCAGCTTGCACTCATTGGGTTGTTaGCTGTGGTCATGCCATACC +
Preference number: 4 (lower is better)
Translates to: HMVSAAGSRCMFINVPSLHSLGC*LWSCHT
Trigger: GGTATGGCATGACCACAGGCAACAACCCAATGAGTG...CAAGCTGGGTACATTTATAAACATACATCTAGACCCTGCTGCCGAAACCATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp ACAAAATGCTGGGATGTAGACTTTTGGCACATTGTGGAAGTAGGAGAACTATTATGGCTGTGGGTACGTTaGTGGGGGAGTGCTACACTG +
Preference number: 4 (lower is better)
Translates to: TKCWDVDFWHIVEVGELLWLWVR*WGSATL
Trigger: CAGTGTAGCACTCCCCCAGCAACGTACCCACAGCCA...TAATAGTTCTCCTACTTCCACAATGTGCCAAAAGTCTACATCCCAGCATTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp ATTCCTATGGTGTCTGAACCCTGTGAAAAACCTCCAAAGATAATAGTTTTGGTTCATCATTGGAGGGAGTaGGGCTGCGCTTGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: IPMVSEPCEKPPKIIVLVHHWRE*GCACLA
Trigger: AGCCAGGCAAGCGCAGCCGCACTCCCTCCAATGATG...AACCAAAACTATTATCTTTGGAGGTTTTTCACAGGGTTCAGACACCATAGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp CACCCCTCGGGTTGGTTTACATATATCATTAGTTTCTCCTCTGGACGTGTCTGTTATGGTGGCTTTTGCTaGCAGAGGAAGACACAGAAC +
Preference number: 4 (lower is better)
Translates to: HPSGWFTYIISFSSGRVCYGGFC*QRKTQN
Trigger: GTTCTGTGTCTTCCTCTGGCAGCAAAAGCCACCATA...ACAGACACGTCCAGAGGAGAAACTAATGATATATGTAAACCAACCCGAGGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp TCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAATGTATTGCTTTTGTTTCATCTTGGTACTaGTGGACCCACTGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: SPTGEQPSCECIKECIAFVSSWY*WTHCSV
Trigger: GACTGAGCAGTGGGTCCAGCAGTACCAAGATGAAAC...AAAAGCAATACATTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp ACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCATTTCCCTTTGGAACTaGCATGTTGATTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: TKHCFQCPELSKSFPCPCISLWN*HVDSER
Trigger: CCTCTCAGAATCAACATGGCAGTTCCAAAGGGAAAT...GCATGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp AGACACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCATTTCCCTTTGGAACTaGCATGTTGATTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: RHQTLLSVSRTVKVLPVPISLWN*HVDSER
Trigger: CCTCTCAGAATCAACATGGCAGTTCCAAAGGGAAAT...GGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp AGACACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCAGAAGAATTTGTGCTTaGGCCCATCTGACTGTCTAT +
Preference number: 4 (lower is better)
Translates to: RHQTLLSVSRTVKVLPVPRRICA*AHLTVY
Trigger: ATAGACAGTCAGATGGGCGCAAGCACAAATTCTTCT...GGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp TCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAATGTATTGCTTTTCACTTTTCTCACGTTTaGTCTGGAACTCCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: SPTGEQPSCECIKECIAFHFSHV*SGTPLL
Trigger: CAGGAGGGGAGTTCCAGAGCAAACGTGAGAAAAGTG...AAAAGCAATACATTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp ACAACCAACCACATGGTTTCGGCAGCAGGGTCTAGATGTATGTTTATAAATGTAACTCGGCCAGGGTGCTaGAAGGTGATTTTGCTGACC +
Preference number: 4 (lower is better)
Translates to: TTNHMVSAAGSRCMFINVTRPGC*KVILLT
Trigger: GGTCAGCAAAATCACCTTCCAGCACCCTGGCCGAGT...TACATTTATAAACATACATCTAGACCCTGCTGCCGAAACCATGTGGTTGGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CACATGGTTTCGGCAGCAGGGTCTAGATGTATGTTTATAAATGTACCCAGCTTGGGACACACTTCAAACTaGAGGAGCCCAGGAGAATCT +
Preference number: 4 (lower is better)
Translates to: HMVSAAGSRCMFINVPSLGHTSN*RSPGES
Trigger: AGATTCTCCTGGGCTCCTCCAGTTTGAAGTGTGTCC...CAAGCTGGGTACATTTATAAACATACATCTAGACCCTGCTGCCGAAACCATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CAGGGATTGATTATGTTTTGTATACTGACATCTGCTGGGACCAGTGAGGACACTAATGAGAGACAGTGCTaGGGTGTCAGCCTGTATGGT +
Preference number: 4 (lower is better)
Translates to: QGLIMFCILTSAGTSEDTNERQC*GVSLYG
Trigger: ACCATACAGGCTGACACCCCAGCACTGTCTCTCATT...AGTGTCCTCACTGGTCCCAGCAGATGTCAGTATACAAAACATAATCAATCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp ATTTCTCTATTTATGAGGTCTTCCTTTGATGTCCCTCAGAATCCAGACTCAGACAGGGGTGCCAATTGGTaGGCAGTCATCACTCGTGCT +
Preference number: 4 (lower is better)
Translates to: ISLFMRSSFDVPQNPDSDRGANW*AVITRA
Trigger: AGCACGAGTGATGACTGCCCACCAATTGGCACCCCT...GTCTGAGTCTGGATTCTGAGGGACATCAAAGGAAGACCTCATAAATAGAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp ACAAAATGCTGGGATGTAGACTTTTGGCACATTGTGGAAGTAGGAGAACTATTATGCTCTTCCCATCATTaGAGGGAGTGCGGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: TKCWDVDFWHIVEVGELLCSSHH*RECGCA
Trigger: AGCGCAGCCGCACTCCCTCCAATGATGGGAAGAGCA...TAATAGTTCTCCTACTTCCACAATGTGCCAAAAGTCTACATCCCAGCATTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp ATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCCCCTTGTGCCTTCTTCCGCTTTaGAGGCTTATCCTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: IQELSPSSWLWQLHQVPLCLLPL*RLILAL
Trigger: AAGAGCAAGGATAAGCCTCCAAAGCGGAAGAAGGCA...CAAGGGGACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CACCCCTCGGGTTGGTTTACATATATCATTAGTTTCTCCTCTGGACGTGTCTGTAATTTTTGGACTGGCTaGATCCAGAAGACCCTTGGC +
Preference number: 4 (lower is better)
Translates to: HPSGWFTYIISFSSGRVCNFWTG*IQKTLG
Trigger: GCCAAGGGTCTTCTGGATCCAGCCAGTCCAAAAATT...ACAGACACGTCCAGAGGAGAAACTAATGATATATGTAAACCAACCCGAGGGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp TCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAATGTATTGCTTTTTCATCTTGGTACTGCTaGACCCACTGCTCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: SPTGEQPSCECIKECIAFSSWYC*THCSVH
Trigger: ATGGACTGAGCAGTGGGTCCAGCAGTACCAAGATGA...AAAAGCAATACATTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CACCACCCCTCTCCCCTTAAGCAAGTAATTTATTCATTGCTTTCTGGCAAAGAAATGTCTCCAAACAGCTaGCCAAATGCTGATGCCCTC +
Preference number: 4 (lower is better)
Translates to: HHPSPLKQVIYSLLSGKEMSPNS*PNADAL
Trigger: GAGGGCATCAGCATTTGGTCAGCTGTTTGGAGACAT...TTCTTTGCCAGAAAGCAATGAATAAATTACTTGCTTAAGGGGAGAGGGGTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp ATTCCTATGGTGTCTGAACCCTGTGAAAAACCTCCAAAGATAATAGTTTTGGTTCCACTGGCACTGAGGTaGGAGCCCAGTCCATTCTGT +
Preference number: 4 (lower is better)
Translates to: IPMVSEPCEKPPKIIVLVPLALR*EPSPFC
Trigger: ACAGAATGGACTGGGCTCTCACCTCAGTGCCAGTGG...AACCAAAACTATTATCTTTGGAGGTTTTTCACAGGGTTCAGACACCATAGGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp ACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCCACATAGAACATATCTaGCGTGATGTAACACTCAGT +
Preference number: 4 (lower is better)
Translates to: TKHCFQCPELSKSFPCPCHIEHI*RDVTLS
Trigger: ACTGAGTGTTACATCACGTCAGATATGTTCTATGTG...GCATGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CACCACCCCTCTCCCCTTAAGCAAGTAATTTATTCATTGCTTTCTGGCAAAGAAGGATTCTCCCCATGGTaGGCCACTTTGACATCACAA +
Preference number: 4 (lower is better)
Translates to: HHPSPLKQVIYSLLSGKEGFSPW*ATLTSQ
Trigger: TTGTGATGTCAAAGTGGCTCACCATGGGGAGAATCC...TTCTTTGCCAGAAAGCAATGAATAAATTACTTGCTTAAGGGGAGAGGGGTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp TTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCCCCTTGCTTTGACAGCTCAAACTaGGTGATGAGTTCATACAGG +
Preference number: 4 (lower is better)
Translates to: FKSYHPQAGFGNYIRSPCFDSSN*VMSSYR
Trigger: CCTGTATGAACTCATCACTCAGTTTGAGCTGTCAAA...GCAAGGGGACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp ATAATACTTCCTGTCTCTCCAAAACGTGACTCCGAGACAAATGACAGGAGGACGGCTGAAAAGATACACTaGAGCGAGATTCTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: IILPVSPKRDSETNDRRTAEKIH*SEILRE
Trigger: CTCTCTCAGAATCTCGCTTCAGTGTATCTTTTCAGC...CGTCCTCCTGTCATTTGTCTCGGAGTCACGTTTTGGAGAGACAGGAAGTATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp TTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAAGAACAACTTTGGCAATaGAGTCGTCTGTACAGATTA +
Preference number: 4 (lower is better)
Translates to: FQWASPTGEQPSCECIKEEQLWQ*SRLYRL
Trigger: TAATCTGTACAGACGACTTCATTGCCAAAGTTGTTC...TTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CACCACCCCTCTCCCCTTAAGCAAGTAATTTATTCATTGCTTTCTGGCAAAGAATCAAAGAGGGCACTCTaGGAATGCCCAGAACTTGAG +
Preference number: 4 (lower is better)
Translates to: HHPSPLKQVIYSLLSGKESKRAL*ECPELE
Trigger: CTCAAGTTCTGGGCATTCTCAGAGTGCCCTCTTTGA...TTCTTTGCCAGAAAGCAATGAATAAATTACTTGCTTAAGGGGAGAGGGGTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CACCACCCCTCTCCCCTTAAGCAAGTAATTTATTCATTGCTTTCTGGCAAAGAAGAGGATGGCTTGCCTTaGGGTTTCATCTTGGTACTG +
Preference number: 4 (lower is better)
Translates to: HHPSPLKQVIYSLLSGKEEDGLP*GFILVL
Trigger: CAGTACCAAGATGAAACCTCAAGGCAAGCCATCCTC...TTCTTTGCCAGAAAGCAATGAATAAATTACTTGCTTAAGGGGAGAGGGGTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp AATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCGAGGATGGCTTGCCTTaGGGTTTCATCTTGGTACTG +
Preference number: 4 (lower is better)
Translates to: NPIQELSPSSWLWQLHQVEDGLP*GFILVL
Trigger: CAGTACCAAGATGAAACCTCAAGGCAAGCCATCCTC...GACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp TCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAATGTATTGCTTTTCTAGTTCCTGACACATaGGAACCACTGGAACCTGAA +
Preference number: 4 (lower is better)
Translates to: SPTGEQPSCECIKECIAFLVPDT*EPLEPE
Trigger: TTCAGGTTCCAGTGGTTCTCATGTGTCAGGAACTAG...AAAAGCAATACATTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp TTTCTGGCAAAGAAATATGACTTGTTTCTGAACAACCAACCACATGGTTTCGGCTCGGATACCATCCTCTaGGCTGGGACTGTTCTGGTA +
Preference number: 4 (lower is better)
Translates to: FLAKKYDLFLNNQPHGFGSDTIL*AGTVLV
Trigger: TACCAGAACAGTCCCAGCTCAGAGGATGGTATCCGA...GCCGAAACCATGTGGTTGGTTGTTCAGAAACAAGTCATATTTCTTTGCCAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp ATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCCCCTTGACTTTGAGAGCCTTCTaGAATGTCTCCAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: IQELSPSSWLWQLHQVPLTLRAF*NVSKQL
Trigger: CAGCTGTTTGGAGACATTGCAGAAGGCTCTCAAAGT...CAAGGGGACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp CAGATCCCAAACGGAATCATCAGGAATGGCACAGTGCAGGTGGTGAAATCAAAGTTCTTTTCCCTTAACTaGTGTACAAGCTCTGGACAG +
Preference number: 4 (lower is better)
Translates to: QIPNGIIRNGTVQVVKSKFFSLN*CTSSGQ
Trigger: CTGTCCAGAGCTTGTACAGCAGTTAAGGGAAAAGAA...CTTTGATTTCACCACCTGCACTGTGCCATTCCTGATGATTCCGTTTGGGATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp GACACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCAACAACGGGATTCCTGTaGAATTTTGCAGTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: DTKHCFQCPELSKSFPCPTTGFL*NFAVSE
Trigger: TTCAGAAACTGCAAAATTGCACAGGAATCCCGTTGT...TGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp ACAAAATGCTGGGATGTAGACTTTTGGCACATTGTGGAAGTAGGAGAACTATTAGGAACTCGGCCAGGGTaGTGGAAGGTGATTTTGCTG +
Preference number: 4 (lower is better)
Translates to: TKCWDVDFWHIVEVGELLGTRPG*WKVILL
Trigger: CAGCAAAATCACCTTCCAGCACCCTGGCCGAGTTCC...TAATAGTTCTCCTACTTCCACAATGTGCCAAAAGTCTACATCCCAGCATTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp CACATGGTTTCGGCAGCAGGGTCTAGATGTATGTTTATAAATGTACCCAGCTTGGTCTTCAACTGTCTCTaGAATGAGAGACAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: HMVSAAGSRCMFINVPSLVFNCL*NERQCW
Trigger: CCAGCACTGTCTCTCATTGCAGAGACAGTTGAAGAC...CAAGCTGGGTACATTTATAAACATACATCTAGACCCTGCTGCCGAAACCATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp ACAACCAACCACATGGTTTCGGCAGCAGGGTCTAGATGTATGTTTATAAATGTATGGCCCACCGACTCATaGCGATCTTTGATGCTCATG +
Preference number: 4 (lower is better)
Translates to: TTNHMVSAAGSRCMFINVWPTDS*RSLMLM
Trigger: CATGAGCATCAAAGATCGGCATGAGTCGGTGGGCCA...TACATTTATAAACATACATCTAGACCCTGCTGCCGAAACCATGTGGTTGGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp TACATCAGAGCAGATTTTTGTCCAAAGACCCTTAACATGAAGCCCAAAGACAGATGGCCCACCGACTCATaGCGATCTTTGATGCTCATG +
Preference number: 4 (lower is better)
Translates to: YIRADFCPKTLNMKPKDRWPTDS*RSLMLM
Trigger: CATGAGCATCAAAGATCGGCATGAGTCGGTGGGCCA...TCTGTCTTTGGGCTTCATGTTAAGGGTCTTTGGACAAAAATCTGCTCTGATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp CACATGGTTTCGGCAGCAGGGTCTAGATGTATGTTTATAAATGTACCCAGCTTGTTACATCTGGGCCAATaGTGTCTGAACTGGACAGTC +
Preference number: 4 (lower is better)
Translates to: HMVSAAGSRCMFINVPSLLHLGQ*CLNWTV
Trigger: GACTGTCCAGTTCAGACAGCATTGGCCCAGATGTAA...CAAGCTGGGTACATTTATAAACATACATCTAGACCCTGCTGCCGAAACCATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp AGGAAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCGTGCTCCATCAGATCTaGAGCACCCAAAGCCTTACC +
Preference number: 4 (lower is better)
Translates to: RKIQFKSYHPQAGFGNYIVLHQI*STQSLT
Trigger: GGTAAGGCTTTGGGTGCTGCAGATCTGATGGAGCAC...GATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp CACCCCTCGGGTTGGTTTACATATATCATTAGTTTCTCCTCTGGACGTGTCTGTAGCCTTCAGATTTACTaGTTTTCACCTTGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: HPSGWFTYIISFSSGRVCSLQIY*FSPCLR
Trigger: CCTCAGGCAAGGTGAAAAGCAGTAAATCTGAAGGCT...ACAGACACGTCCAGAGGAGAAACTAATGATATATGTAAACCAACCCGAGGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp CTGTTTCTCCAAAAAGGTCCGACTGTGTGCTACACGGTAGCAAGGGTTATCTTCAGAAGAATTTGTGCTTaGGCCCATCTGACTGTCTAT +
Preference number: 4 (lower is better)
Translates to: LFLQKGPTVCYTVARVIFRRICA*AHLTVY
Trigger: ATAGACAGTCAGATGGGCGCAAGCACAAATTCTTCT...GAAGATAACCCTTGCTACCGTGTAGCACACAGTCGGACCTTTTTGGAGAAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp AGGAAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCGCAGTGCTGCTGACCTaGAAGAGCAGCGTAAAATCG +
Preference number: 4 (lower is better)
Translates to: RKIQFKSYHPQAGFGNYIAVLLT*KSSVKS
Trigger: CGATTTTACGCTGCTCTTCCAGGTCAGCAGCACTGC...GATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CATTTTCCCAACCTAGTTTCTAAGATAATACTTCCTGTCTCTCCAAAACGTGACACTCGGCCAGGGTGCTaGAAGGTGATTTTGCTGACC +
Preference number: 4 (lower is better)
Translates to: HFPNLVSKIILPVSPKRDTRPGC*KVILLT
Trigger: GGTCAGCAAAATCACCTTCCAGCACCCTGGCCGAGT...GTCACGTTTTGGAGAGACAGGAAGTATTATCTTAGAAACTAGGTTGGGAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp AATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCGGACACACTTCAAACTaGAGGAGCCCAGGAGAATCT +
Preference number: 4 (lower is better)
Translates to: NPIQELSPSSWLWQLHQVGHTSN*RSPGES
Trigger: AGATTCTCCTGGGCTCCTCCAGTTTGAAGTGTGTCC...GACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp TCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAATGTATTGCTTTTAGTGGTACCACTCATTaGGTTGTTGCCTGTGGTCAT +
Preference number: 4 (lower is better)
Translates to: SPTGEQPSCECIKECIAFSGTTH*VVACGH
Trigger: ATGACCACAGGCAACAACCCAATGAGTGGTACCACT...AAAAGCAATACATTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CAGATCCCAAACGGAATCATCAGGAATGGCACAGTGCAGGTGGTGAAATCAAAGCAAACTGGTAAGAATTaGGTTCTGAGACACCTTGCT +
Preference number: 4 (lower is better)
Translates to: QIPNGIIRNGTVQVVKSKQTGKN*VLRHLA
Trigger: AGCAAGGTGTCTCAGAACCCAATTCTTACCAGTTTG...CTTTGATTTCACCACCTGCACTGTGCCATTCCTGATGATTCCGTTTGGGATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp TACATCAGAGCAGATTTTTGTCCAAAGACCCTTAACATGAAGCCCAAAGACAGAAGTGCTACACTGGCTTaGAGCTGGGGTGATATGAGG +
Preference number: 4 (lower is better)
Translates to: YIRADFCPKTLNMKPKDRSATLA*SWGDMR
Trigger: CCTCATATCACCCCAGCTCCAAGCCAGTGTAGCACT...TCTGTCTTTGGGCTTCATGTTAAGGGTCTTTGGACAAAAATCTGCTCTGATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp ATTCCTATGGTGTCTGAACCCTGTGAAAAACCTCCAAAGATAATAGTTTTGGTTGTGAGACACTGGCTGTaGGTACGTTGCTGGGGGAGT +
Preference number: 4 (lower is better)
Translates to: IPMVSEPCEKPPKIIVLVVRHWL*VRCWGS
Trigger: ACTCCCCCAGCAACGTACCCACAGCCAGTGTCTCAC...AACCAAAACTATTATCTTTGGAGGTTTTTCACAGGGTTCAGACACCATAGGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp AGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCCCCTTGCTCACCTAAACCACTTTGGCTTTaGCTGTTCAACAAATCAGGA +
Preference number: 4 (lower is better)
Translates to: SYHPQAGFGNYIRSPCSPKPLWL*LFNKSG
Trigger: TCCTGATTTGTTGAACAGCCAAAGCCAAAGTGGTTT...AGGTGAGCAAGGGGACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp AATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCAGAAGAACTGTGAGATaGGGACTTCCCCTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: NPIQELSPSSWLWQLHQVRRTVR*GLPLSV
Trigger: GACACTGAGGGGAAGTCCCCATCTCACAGTTCTTCT...GACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp TCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAATGTATTGCTTTTGATCCAGAAGACCCTTaGCTAGCATACATACTGCCA +
Preference number: 4 (lower is better)
Translates to: SPTGEQPSCECIKECIAFDPEDP*LAYILP
Trigger: TGGCAGTATGTATGCTAGCCAAGGGTCTTCTGGATC...AAAAGCAATACATTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp AAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGCAGCTGACCAAATGCTaGTGCCCTCCAGAACTCATT +
Preference number: 4 (lower is better)
Translates to: KIQFKSYHPQAGFGNYIRQLTKC*CPPELI
Trigger: AATGAGTTCTGGAGGGCATCAGCATTTGGTCAGCTG...CCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp AAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGGGATTCTCCCCATGGTaGGCCACTTTGACATCACAA +
Preference number: 4 (lower is better)
Translates to: KIQFKSYHPQAGFGNYIRGFSPW*ATLTSQ
Trigger: TTGTGATGTCAAAGTGGCTCACCATGGGGAGAATCC...CCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CACATGGTTTCGGCAGCAGGGTCTAGATGTATGTTTATAAATGTACCCAGCTTGACTGAAGCGAGATTCTaGGAGAGGACACACTTCAAA +
Preference number: 4 (lower is better)
Translates to: HMVSAAGSRCMFINVPSLTEARF*ERTHFK
Trigger: TTTGAAGTGTGTCCTCTCTCAGAATCTCGCTTCAGT...CAAGCTGGGTACATTTATAAACATACATCTAGACCCTGCTGCCGAAACCATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp TTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCCCCTTGCGAACAACTTTGGCAATaGAGTCGTCTGTACAGATTA +
Preference number: 4 (lower is better)
Translates to: FKSYHPQAGFGNYIRSPCEQLWQ*SRLYRL
Trigger: TAATCTGTACAGACGACTTCATTGCCAAAGTTGTTC...GCAAGGGGACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp ACAACCAACCACATGGTTTCGGCAGCAGGGTCTAGATGTATGTTTATAAATGTAAGAATGCCCAGAACTTaGGGAATCTCGAACAGGGGT +
Preference number: 4 (lower is better)
Translates to: TTNHMVSAAGSRCMFINVRMPRT*GISNRG
Trigger: ACCCCTGTTCGAGATTCCTCAAGTTCTGGGCATTCT...TACATTTATAAACATACATCTAGACCCTGCTGCCGAAACCATGTGGTTGGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp TCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAATGTATTGCTTTTGTTCTGGTTAAATTTTaGATGGAGCCGTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: SPTGEQPSCECIKECIAFVLVKF*MEPFQE
Trigger: CTCCTGGAACGGCTCCATGCAAAATTTAACCAGAAC...AAAAGCAATACATTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp CCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCTCAAACGATCAGTCATTaGTGGCAAAGATGTTACTTT +
Preference number: 4 (lower is better)
Translates to: PNIAFSVQNCQSPSRAHAQTISH*WQRCYF
Trigger: AAAGTAACATCTTTGCCAGCAATGACTGATCGTTTG...AGCATGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp AGGAAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCTGCAATGAGAGACAGTaGTGGGGTGTCAGCCTGTAT +
Preference number: 4 (lower is better)
Translates to: RKIQFKSYHPQAGFGNYICNERQ*WGVSLY
Trigger: ATACAGGCTGACACCCCAGCACTGTCTCTCATTGCA...GATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp ACAACCAACCACATGGTTTCGGCAGCAGGGTCTAGATGTATGTTTATAAATGTATGCAATGAGAGACAGTaGTGGGGTGTCAGCCTGTAT +
Preference number: 4 (lower is better)
Translates to: TTNHMVSAAGSRCMFINVCNERQ*WGVSLY
Trigger: ATACAGGCTGACACCCCAGCACTGTCTCTCATTGCA...TACATTTATAAACATACATCTAGACCCTGCTGCCGAAACCATGTGGTTGGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp CACCACCCCTCTCCCCTTAAGCAAGTAATTTATTCATTGCTTTCTGGCAAAGAAGTCTTCAACTGTCTCTaGAATGAGAGACAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: HHPSPLKQVIYSLLSGKEVFNCL*NERQCW
Trigger: CCAGCACTGTCTCTCATTGCAGAGACAGTTGAAGAC...TTCTTTGCCAGAAAGCAATGAATAAATTACTTGCTTAAGGGGAGAGGGGTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp ACAACCAACCACATGGTTTCGGCAGCAGGGTCTAGATGTATGTTTATAAATGTACACTCATTGGGTTGTTaGCTGTGGTCATGCCATACC +
Preference number: 4 (lower is better)
Translates to: TTNHMVSAAGSRCMFINVHSLGC*LWSCHT
Trigger: GGTATGGCATGACCACAGGCAACAACCCAATGAGTG...TACATTTATAAACATACATCTAGACCCTGCTGCCGAAACCATGTGGTTGGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp AAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGGCTTCCAGCAGCATCTaGAATAAGGTCAGCTGGATC +
Preference number: 4 (lower is better)
Translates to: KIQFKSYHPQAGFGNYIRASSSI*NKVSWI
Trigger: GATCCAGCTGACCTTATTGCAGATGCTGCTGGAAGC...CCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp CACATGGTTTCGGCAGCAGGGTCTAGATGTATGTTTATAAATGTACCCAGCTTGTCTTATGCTTCTCAGTaGTGTACTCTGGAAGTGGTC +
Preference number: 4 (lower is better)
Translates to: HMVSAAGSRCMFINVPSLSYASQ*CTLEVV
Trigger: GACCACTTCCAGAGTACAGCACTGAGAAGCATAAGA...CAAGCTGGGTACATTTATAAACATACATCTAGACCCTGCTGCCGAAACCATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp CCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCTTTTTTGTGCTTCTTATaGTTCTCAGTGCTGTACTCT +
Preference number: 4 (lower is better)
Translates to: PNIAFSVQNCQSPSRAHAFLCFL*FSVLYS
Trigger: AGAGTACAGCACTGAGAAGCATAAGAAGCACAAAAA...AGCATGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CACCACCCCTCTCCCCTTAAGCAAGTAATTTATTCATTGCTTTCTGGCAAAGAATGGTTAAATTTTGCATaGAGCCGTTCCAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: HHPSPLKQVIYSLLSGKEWLNFA*SRSRRE
Trigger: CTCCCTCCTGGAACGGCTCCATGCAAAATTTAACCA...TTCTTTGCCAGAAAGCAATGAATAAATTACTTGCTTAAGGGGAGAGGGGTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp GGAAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCACTGCTGTACAAGCTCTaGACAGCTCACAGGATTCTC +
Preference number: 4 (lower is better)
Translates to: GKSNSRVITLKLALAITSLLYKL*TAHRIL
Trigger: GAGAATCCTGTGAGCTGTCCAGAGCTTGTACAGCAG...TGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CTGTTTCTCCAAAAAGGTCCGACTGTGTGCTACACGGTAGCAAGGGTTATCTTCCAGTTTGTTGTCCCCTaGGAGATTATACAGATTAAC +
Preference number: 4 (lower is better)
Translates to: LFLQKGPTVCYTVARVIFQFVVP*EIIQIN
Trigger: GTTAATCTGTATAATCTCCCAGGGGACAACAAACTG...GAAGATAACCCTTGCTACCGTGTAGCACACAGTCGGACCTTTTTGGAGAAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp TTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAATCCTGTTCTAAGGATTaGAGAGCCAGATACATTTTA +
Preference number: 4 (lower is better)
Translates to: FQWASPTGEQPSCECIKESCSKD*RARYIL
Trigger: TAAAATGTATCTGGCTCTCCAATCCTTAGAACAGGA...TTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp ACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCGATACTGGAATTGGCTaGGGAAATTTCAAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: TKHCFQCPELSKSFPCPCDTGIG*GNFKKK
Trigger: TTTCTTCTTGAAATTTCCCCAGCCAATTCCAGTATC...GCATGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCTTCATCGTCACAGGAATaGACATACATCTTTGAACAA +
Preference number: 4 (lower is better)
Translates to: PNIAFSVQNCQSPSRAHASSSQE*TYIFEQ
Trigger: TTGTTCAAAGATGTATGTCCATTCCTGTGACGATGA...AGCATGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp AAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGACACTGGCTTGGAGCTaGGGTGATATGAGGTGTATC +
Preference number: 4 (lower is better)
Translates to: KIQFKSYHPQAGFGNYIRTLAWS*GDMRCI
Trigger: GATACACCTCATATCACCCCAGCTCCAAGCCAGTGT...CCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp TACATCAGAGCAGATTTTTGTCCAAAGACCCTTAACATGAAGCCCAAAGACAGATCCACCGTGTCAGCCTaGCTGCTGCCCTTAAATTTT +
Preference number: 4 (lower is better)
Translates to: YIRADFCPKTLNMKPKDRSTVSA*LLPLNF
Trigger: AAAATTTAAGGGCAGCAGCCAGGCTGACACGGTGGA...TCTGTCTTTGGGCTTCATGTTAAGGGTCTTTGGACAAAAATCTGCTCTGATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp TACATCAGAGCAGATTTTTGTCCAAAGACCCTTAACATGAAGCCCAAAGACAGATCATCTTGGTACTGCTaGACCCACTGCTCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: YIRADFCPKTLNMKPKDRSSWYC*THCSVH
Trigger: ATGGACTGAGCAGTGGGTCCAGCAGTACCAAGATGA...TCTGTCTTTGGGCTTCATGTTAAGGGTCTTTGGACAAAAATCTGCTCTGATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp TTTCTGGCAAAGAAATATGACTTGTTTCTGAACAACCAACCACATGGTTTCGGCACCCCGTTCGTGCTTTaGAGTGGAACCACTGATAAG +
Preference number: 4 (lower is better)
Translates to: FLAKKYDLFLNNQPHGFGTPFVL*SGTTDK
Trigger: CTTATCAGTGGTTCCACTCCAAAGCACGAACGGGGT...GCCGAAACCATGTGGTTGGTTGTTCAGAAACAAGTCATATTTCTTTGCCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
3UTR CAA 72 bp TCCTATTTATTGCCTTGGGACACAGAAATGGCGGAGTaGTTGAAAACCAATGACCAGAAAAGGGAGAACACC +
Preference number: 4 (lower is better)
Translates to: SYLLPWDTEMAE*LKTNDQKRENT
Trigger: GGTGTTCTCCCTTTTCTGGTCATTGGTTTTCAACAACTCCGCCATTTCTGTGTCCCAAGGCAATAAATAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp TCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAATGTATTGCTTTTGCAAAGATGTTACTTTaGGAGCCTTCTGCAATGTCT +
Preference number: 4 (lower is better)
Translates to: SPTGEQPSCECIKECIAFAKMLL*EPSAMS
Trigger: AGACATTGCAGAAGGCTCTCAAAGTAACATCTTTGC...AAAAGCAATACATTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp ACAAAATGCTGGGATGTAGACTTTTGGCACATTGTGGAAGTAGGAGAACTATTATTCATATTCATTAAATaGCCCCCACTCCGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: TKCWDVDFWHIVEVGELLFIFIK*PPLRGV
Trigger: CACCCCGCGGAGTGGGGGTCATTTAATGAATATGAA...TAATAGTTCTCCTACTTCCACAATGTGCCAAAAGTCTACATCCCAGCATTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CAGGGATTGATTATGTTTTGTATACTGACATCTGCTGGGACCAGTGAGGACACTTCCTTCAATTGTCACTaGGGCATTCATTCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: QGLIMFCILTSAGTSEDTSFNCH*GIHSQR
Trigger: TCTTTGGGAATGAATGCCTCAGTGACAATTGAAGGA...AGTGTCCTCACTGGTCCCAGCAGATGTCAGTATACAAAACATAATCAATCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CAGGGATTGATTATGTTTTGTATACTGACATCTGCTGGGACCAGTGAGGACACTTTTGACAGCTCAAACTaGGTGATGAGTTCATACAGG +
Preference number: 4 (lower is better)
Translates to: QGLIMFCILTSAGTSEDTFDSSN*VMSSYR
Trigger: CCTGTATGAACTCATCACTCAGTTTGAGCTGTCAAA...AGTGTCCTCACTGGTCCCAGCAGATGTCAGTATACAAAACATAATCAATCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp AGGAAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGGTCAGGATCCTTTaGCAGCTCAAACTGAGTGAT +
Preference number: 4 (lower is better)
Translates to: RKIQFKSYHPQAGFGNYIRVRIL*QLKLSD
Trigger: ATCACTCAGTTTGAGCTGTCAAAGGATCCTGACCCT...GATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp ATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCCCCTTGGAACAACTTTGGCAATaGAGTCGTCTGTACAGATTA +
Preference number: 4 (lower is better)
Translates to: IQELSPSSWLWQLHQVPLEQLWQ*SRLYRL
Trigger: TAATCTGTACAGACGACTTCATTGCCAAAGTTGTTC...CAAGGGGACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp ATTTCTCTATTTATGAGGTCTTCCTTTGATGTCCCTCAGAATCCAGACTCAGACGTAAGAATTGGGTTCTaGGACACCTTGCTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: ISLFMRSSFDVPQNPDSDVRIGF*DTLLKS
Trigger: GGACTTCAGCAAGGTGTCTCAGAACCCAATTCTTAC...GTCTGAGTCTGGATTCTGAGGGACATCAAAGGAAGACCTCATAAATAGAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp ATAATACTTCCTGTCTCTCCAAAACGTGACTCCGAGACAAATGACAGGAGGACGGAGATGCAAATCCTTTaGAATCATCATTATCCCCAC +
Preference number: 4 (lower is better)
Translates to: IILPVSPKRDSETNDRRTEMQIL*NHHYPH
Trigger: GTGGGGATAATGATGATTTCAAAGGATTTGCATCTC...CGTCCTCCTGTCATTTGTCTCGGAGTCACGTTTTGGAGAGACAGGAAGTATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp ATTTCTCTATTTATGAGGTCTTCCTTTGATGTCCCTCAGAATCCAGACTCAGACCATACATACTGCCACTaGGCTTGGAACTTGATGAGC +
Preference number: 4 (lower is better)
Translates to: ISLFMRSSFDVPQNPDSDHTYCH*AWNLMS
Trigger: GCTCATCAAGTTCCAAGCTCAGTGGCAGTATGTATG...GTCTGAGTCTGGATTCTGAGGGACATCAAAGGAAGACCTCATAAATAGAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp AGGAAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCCAAATAGGTACACGTTaGCTTCATGTCCTTGCCGTC +
Preference number: 4 (lower is better)
Translates to: RKIQFKSYHPQAGFGNYIQIGTR*LHVLAV
Trigger: GACGGCAAGGACATGAAGTCAACGTGTACCTATTTG...GATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092735.12
CDS-3UTR GCA 90 bp TTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAAACAAGACCCTTAAGATaGTTGGAAAATTCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: FQWASPTGEQPSCECIKETRPLR*LENSSK
Trigger: TTTTGAGGAATTTTCCAAGCATCTTAAGGGTCTTGT...TTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp GACACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCACAGTTTCTGAACAAATaGTTTAGATACTGGAATTGG +
Preference number: 4 (lower is better)
Translates to: DTKHCFQCPELSKSFPCPQFLNK*FRYWNW
Trigger: CCAATTCCAGTATCTAAAGCATTTGTTCAGAAACTG...TGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp GGAAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGGGAGCCTCCGTCGTaGTTGCTGATAATGATTTTT +
Preference number: 4 (lower is better)
Translates to: GKSNSRVITLKLALAITSGEPPS*LLIMIF
Trigger: AAAAATCATTATCAGCAAGCACGACGGAGGCTCCCC...TGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp AATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCTTGACTTCATGTCCTTaGCGTCTTTCAAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: NPIQELSPSSWLWQLHQVLTSCP*RLSNRR
Trigger: CCTCCTGTTTGAAAGACGGCAAGGACATGAAGTCAA...GACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092735.12
CDS-3UTR CCA 90 bp AGGAAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCTGGTTAAATTTTGCATaGAGCCGTTCCAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: RKIQFKSYHPQAGFGNYIWLNFA*SRSRRE
Trigger: CTCCCTCCTGGAACGGCTCCATGCAAAATTTAACCA...GATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp ATTGCCCAGGGATTGATTATGTTTTGTATACTGACATCTGCTGGGACCAGTGAGCTCCAAGGTCTGTTCTaGTTAAATTTTGCATGGAGC +
Preference number: 4 (lower is better)
Translates to: IAQGLIMFCILTSAGTSELQGLF*LNFAWS
Trigger: GCTCCATGCAAAATTTAACCAGAACAGACCTTGGAG...CTCACTGGTCCCAGCAGATGTCAGTATACAAAACATAATCAATCCCTGGGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp GACACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCATTTAGATACTGGAATTaGCTGGGGAAATTTCAAGAA +
Preference number: 4 (lower is better)
Translates to: DTKHCFQCPELSKSFPCPFRYWN*LGKFQE
Trigger: TTCTTGAAATTTCCCCAGCCAATTCCAGTATCTAAA...TGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp GGAATGGCATCAGCTCTCCTGCAAACAAAATGCTGGGATGTAGACTTTTGGCACTCATCGTCACAGGAATaGACATACATCTTTGAACAA +
Preference number: 4 (lower is better)
Translates to: GMASALLQTKCWDVDFWHSSSQE*TYIFEQ
Trigger: TTGTTCAAAGATGTATGTCCATTCCTGTGACGATGA...GTGCCAAAAGTCTACATCCCAGCATTTTGTTTGCAGGAGAGCTGATGCCATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CACATGGTTTCGGCAGCAGGGTCTAGATGTATGTTTATAAATGTACCCAGCTTGCAAACTGGTAAGAATTaGGTTCTGAGACACCTTGCT +
Preference number: 4 (lower is better)
Translates to: HMVSAAGSRCMFINVPSLQTGKN*VLRHLA
Trigger: AGCAAGGTGTCTCAGAACCCAATTCTTACCAGTTTG...CAAGCTGGGTACATTTATAAACATACATCTAGACCCTGCTGCCGAAACCATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CACATGGTTTCGGCAGCAGGGTCTAGATGTATGTTTATAAATGTACCCAGCTTGTGGGAGATTTCCCTTTaGAACTGCCATGTTGATTCT +
Preference number: 4 (lower is better)
Translates to: HMVSAAGSRCMFINVPSLWEISL*NCHVDS
Trigger: AGAATCAACATGGCAGTTCCAAAGGGAAATCTCCCA...CAAGCTGGGTACATTTATAAACATACATCTAGACCCTGCTGCCGAAACCATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp AATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCCTCTTCTCCATTACTTaGCGCACAAGCTTAATGGTT +
Preference number: 4 (lower is better)
Translates to: NPIQELSPSSWLWQLHQVLFSIT*RTSLMV
Trigger: AACCATTAAGCTTGTGCGTCAAGTAATGGAGAAGAG...GACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CACCACCCCTCTCCCCTTAAGCAAGTAATTTATTCATTGCTTTCTGGCAAAGAATCCTTCAATTGTCACTaGGGCATTCATTCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: HHPSPLKQVIYSLLSGKESFNCH*GIHSQR
Trigger: TCTTTGGGAATGAATGCCTCAGTGACAATTGAAGGA...TTCTTTGCCAGAAAGCAATGAATAAATTACTTGCTTAAGGGGAGAGGGGTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp AATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCTCCTTCAATTGTCACTaGGGCATTCATTCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: NPIQELSPSSWLWQLHQVSFNCH*GIHSQR
Trigger: TCTTTGGGAATGAATGCCTCAGTGACAATTGAAGGA...GACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp AGGAAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCGCTGAAAAGATACACTaGAGCGAGATTCTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: RKIQFKSYHPQAGFGNYIAEKIH*SEILRE
Trigger: CTCTCTCAGAATCTCGCTTCAGTGTATCTTTTCAGC...GATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp ATAATACTTCCTGTCTCTCCAAAACGTGACTCCGAGACAAATGACAGGAGGACGATGGACATACATCTTTaGACAACTTTGGCAATGAAG +
Preference number: 4 (lower is better)
Translates to: IILPVSPKRDSETNDRRTMDIHL*TTLAMK
Trigger: CTTCATTGCCAAAGTTGTTCAAAGATGTATGTCCAT...CGTCCTCCTGTCATTTGTCTCGGAGTCACGTTTTGGAGAGACAGGAAGTATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp ATTCCTATGGTGTCTGAACCCTGTGAAAAACCTCCAAAGATAATAGTTTTGGTTTCAAAGAGGGCACTCTaGGAATGCCCAGAACTTGAG +
Preference number: 4 (lower is better)
Translates to: IPMVSEPCEKPPKIIVLVSKRAL*ECPELE
Trigger: CTCAAGTTCTGGGCATTCTCAGAGTGCCCTCTTTGA...AACCAAAACTATTATCTTTGGAGGTTTTTCACAGGGTTCAGACACCATAGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp ACAAAATGCTGGGATGTAGACTTTTGGCACATTGTGGAAGTAGGAGAACTATTACTATTAGAAGAACTGTaGGATGGGGACTTCCCCTCA +
Preference number: 4 (lower is better)
Translates to: TKCWDVDFWHIVEVGELLLLEEL*DGDFPS
Trigger: TGAGGGGAAGTCCCCATCTCACAGTTCTTCTAATAG...TAATAGTTCTCCTACTTCCACAATGTGCCAAAAGTCTACATCCCAGCATTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp GGAAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGTTCTGGTTAAATTTTaGATGGAGCCGTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: GKSNSRVITLKLALAITSVLVKF*MEPFQE
Trigger: CTCCTGGAACGGCTCCATGCAAAATTTAACCAGAAC...TGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp CACCCCTCGGGTTGGTTTACATATATCATTAGTTTCTCCTCTGGACGTGTCTGTGGAACATTCTTTTCATaGAAAATGATAGGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: HPSGWFTYIISFSSGRVCGTFFS*KMIGEA
Trigger: TGCCTCTCCTATCATTTTGCATGAAAAGAATGTTCC...ACAGACACGTCCAGAGGAGAAACTAATGATATATGTAAACCAACCCGAGGGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp CACATGGTTTCGGCAGCAGGGTCTAGATGTATGTTTATAAATGTACCCAGCTTGACAACGGGATTCCTGTaGAATTTTGCAGTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: HMVSAAGSRCMFINVPSLTTGFL*NFAVSE
Trigger: TTCAGAAACTGCAAAATTGCACAGGAATCCCGTTGT...CAAGCTGGGTACATTTATAAACATACATCTAGACCCTGCTGCCGAAACCATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp AGGAAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCACATGTGTTGAGTCTTaGACATCCATCACCACACAC +
Preference number: 4 (lower is better)
Translates to: RKIQFKSYHPQAGFGNYITCVES*TSITTH
Trigger: GTGTGTGGTGATGGATGTGCAAGACTCAACACATGT...GATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp ATTGCCCAGGGATTGATTATGTTTTGTATACTGACATCTGCTGGGACCAGTGAGCTGGTAACCACCCCATaGTTCAATTTATCTATGACA +
Preference number: 4 (lower is better)
Translates to: IAQGLIMFCILTSAGTSELVTTP*FNLSMT
Trigger: TGTCATAGATAAATTGAAGCATGGGGTGGTTACCAG...CTCACTGGTCCCAGCAGATGTCAGTATACAAAACATAATCAATCCCTGGGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp ATAATACTTCCTGTCTCTCCAAAACGTGACTCCGAGACAAATGACAGGAGGACGTTTTTGTGCTTCTTATaGTTCTCAGTGCTGTACTCT +
Preference number: 4 (lower is better)
Translates to: IILPVSPKRDSETNDRRTFLCFL*FSVLYS
Trigger: AGAGTACAGCACTGAGAAGCATAAGAAGCACAAAAA...CGTCCTCCTGTCATTTGTCTCGGAGTCACGTTTTGGAGAGACAGGAAGTATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp ACAAAATGCTGGGATGTAGACTTTTGGCACATTGTGGAAGTAGGAGAACTATTACGGAAAGGTGTTGGTTaGTGTAGTGGTACCACTCAT +
Preference number: 4 (lower is better)
Translates to: TKCWDVDFWHIVEVGELLRKGVG*CSGTTH
Trigger: ATGAGTGGTACCACTACACCAACCAACACCTTTCCG...TAATAGTTCTCCTACTTCCACAATGTGCCAAAAGTCTACATCCCAGCATTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp ATTCCTATGGTGTCTGAACCCTGTGAAAAACCTCCAAAGATAATAGTTTTGGTTGTGAGTCGACATCCATaGAAAAGAGCTCCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: IPMVSEPCEKPPKIIVLVVSRHP*KRAPSG
Trigger: TCCAGAGGGAGCTCTTTTCCATGGATGTCGACTCAC...AACCAAAACTATTATCTTTGGAGGTTTTTCACAGGGTTCAGACACCATAGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp ATTCCTATGGTGTCTGAACCCTGTGAAAAACCTCCAAAGATAATAGTTTTGGTTCAATGCTGTCTGAACTaGACAGTCGGACCATCCTCT +
Preference number: 4 (lower is better)
Translates to: IPMVSEPCEKPPKIIVLVQCCLN*TVGPSS
Trigger: AGAGGATGGTCCGACTGTCCAGTTCAGACAGCATTG...AACCAAAACTATTATCTTTGGAGGTTTTTCACAGGGTTCAGACACCATAGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CACATGGTTTCGGCAGCAGGGTCTAGATGTATGTTTATAAATGTACCCAGCTTGAAACCACTTTGGCTTTaGCTGTTCAACAAATCAGGA +
Preference number: 4 (lower is better)
Translates to: HMVSAAGSRCMFINVPSLKPLWL*LFNKSG
Trigger: TCCTGATTTGTTGAACAGCCAAAGCCAAAGTGGTTT...CAAGCTGGGTACATTTATAAACATACATCTAGACCCTGCTGCCGAAACCATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp ATTCCTATGGTGTCTGAACCCTGTGAAAAACCTCCAAAGATAATAGTTTTGGTTTCCACCGTGTCAGCCTaGCTGCTGCCCTTAAATTTT +
Preference number: 4 (lower is better)
Translates to: IPMVSEPCEKPPKIIVLVSTVSA*LLPLNF
Trigger: AAAATTTAAGGGCAGCAGCCAGGCTGACACGGTGGA...AACCAAAACTATTATCTTTGGAGGTTTTTCACAGGGTTCAGACACCATAGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp ACAAAATGCTGGGATGTAGACTTTTGGCACATTGTGGAAGTAGGAGAACTATTATGCCTTCTTCCGCTTTaGAGGCTTATCCTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: TKCWDVDFWHIVEVGELLCLLPL*RLILAL
Trigger: AAGAGCAAGGATAAGCCTCCAAAGCGGAAGAAGGCA...TAATAGTTCTCCTACTTCCACAATGTGCCAAAAGTCTACATCCCAGCATTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp AGGAAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCGATGAATTTTTGGACTaGCTGGATCCAGAAGACCCT +
Preference number: 4 (lower is better)
Translates to: RKIQFKSYHPQAGFGNYIDEFLD*LDPEDP
Trigger: AGGGTCTTCTGGATCCAGCCAGTCCAAAAATTCATC...GATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
3UTR CAA 72 bp GTGAGCAACCTTCATGCGAATGCATCAAGGAATGTATaGCTTTTTCATTTTCTGCCCAGCCCTTCAAATACA +
Preference number: 4 (lower is better)
Translates to: VSNLHANASRNV*LFHFLPSPSNT
Trigger: TGTATTTGAAGGGCTGGGCAGAAAATGAAAAAGCAATACATTCCTTGATGCATTCGCATGAAGGTTGCTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
3UTR CAA 72 bp GATGAAGATAAAGTAGAGCACAAGATTGCCCAGGGATaGATTATGTTTTGTATACTGACATCTGCTGGGACC +
Preference number: 4 (lower is better)
Translates to: DEDKVEHKIAQG*IMFCILTSAGT
Trigger: GGTCCCAGCAGATGTCAGTATACAAAACATAATCAATCCCTGGGCAATCTTGTGCTCTACTTTATCTTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
3UTR CAA 72 bp TATTTATTGCCTTGGGACACAGAAATGGCGGAGTTGTaGAAAACCAATGACCAGAAAAGGGAGAACACCAAA +
Preference number: 4 (lower is better)
Translates to: YLLPWDTEMAEL*KTNDQKRENTK
Trigger: TTTGGTGTTCTCCCTTTTCTGGTCATTGGTTTTCAACAACTCCGCCATTTCTGTGTCCCAAGGCAATAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp ATTTCTCTATTTATGAGGTCTTCCTTTGATGTCCCTCAGAATCCAGACTCAGACGCAAAGATGTTACTTTaGGAGCCTTCTGCAATGTCT +
Preference number: 4 (lower is better)
Translates to: ISLFMRSSFDVPQNPDSDAKMLL*EPSAMS
Trigger: AGACATTGCAGAAGGCTCTCAAAGTAACATCTTTGC...GTCTGAGTCTGGATTCTGAGGGACATCAAAGGAAGACCTCATAAATAGAGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CACCACCCCTCTCCCCTTAAGCAAGTAATTTATTCATTGCTTTCTGGCAAAGAACACATAGAACATATCTaGCGTGATGTAACACTCAGT +
Preference number: 4 (lower is better)
Translates to: HHPSPLKQVIYSLLSGKEHIEHI*RDVTLS
Trigger: ACTGAGTGTTACATCACGTCAGATATGTTCTATGTG...TTCTTTGCCAGAAAGCAATGAATAAATTACTTGCTTAAGGGGAGAGGGGTGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp ACAACCAACCACATGGTTTCGGCAGCAGGGTCTAGATGTATGTTTATAAATGTATTTGACAGCTCAAACTaGGTGATGAGTTCATACAGG +
Preference number: 4 (lower is better)
Translates to: TTNHMVSAAGSRCMFINVFDSSN*VMSSYR
Trigger: CCTGTATGAACTCATCACTCAGTTTGAGCTGTCAAA...TACATTTATAAACATACATCTAGACCCTGCTGCCGAAACCATGTGGTTGGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp ATTCCTATGGTGTCTGAACCCTGTGAAAAACCTCCAAAGATAATAGTTTTGGTTAGGGTCAGGATCCTTTaGCAGCTCAAACTGAGTGAT +
Preference number: 4 (lower is better)
Translates to: IPMVSEPCEKPPKIIVLVRVRIL*QLKLSD
Trigger: ATCACTCAGTTTGAGCTGTCAAAGGATCCTGACCCT...AACCAAAACTATTATCTTTGGAGGTTTTTCACAGGGTTCAGACACCATAGGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CATTTTCCCAACCTAGTTTCTAAGATAATACTTCCTGTCTCTCCAAAACGTGACACTGAAGCGAGATTCTaGGAGAGGACACACTTCAAA +
Preference number: 4 (lower is better)
Translates to: HFPNLVSKIILPVSPKRDTEARF*ERTHFK
Trigger: TTTGAAGTGTGTCCTCTCTCAGAATCTCGCTTCAGT...GTCACGTTTTGGAGAGACAGGAAGTATTATCTTAGAAACTAGGTTGGGAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CATTTTCCCAACCTAGTTTCTAAGATAATACTTCCTGTCTCTCCAAAACGTGACTCATTCACAGGGTGCTaGAAAGATACACTGAAGCGA +
Preference number: 4 (lower is better)
Translates to: HFPNLVSKIILPVSPKRDSFTGC*KDTLKR
Trigger: TCGCTTCAGTGTATCTTTTCAGCACCCTGTGAATGA...GTCACGTTTTGGAGAGACAGGAAGTATTATCTTAGAAACTAGGTTGGGAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp TTTCTGGCAAAGAAATATGACTTGTTTCTGAACAACCAACCACATGGTTTCGGCGTCCCTTTAGGAATCTaGATGGTAATCTTGGGAATG +
Preference number: 4 (lower is better)
Translates to: FLAKKYDLFLNNQPHGFGVPLGI*MVILGM
Trigger: CATTCCCAAGATTACCATTCAGATTCCTAAAGGGAC...GCCGAAACCATGTGGTTGGTTGTTCAGAAACAAGTCATATTTCTTTGCCAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp CAGGGATTGATTATGTTTTGTATACTGACATCTGCTGGGACCAGTGAGGACACTCAAACGATCAGTCATTaGTGGCAAAGATGTTACTTT +
Preference number: 4 (lower is better)
Translates to: QGLIMFCILTSAGTSEDTQTISH*WQRCYF
Trigger: AAAGTAACATCTTTGCCAGCAATGACTGATCGTTTG...AGTGTCCTCACTGGTCCCAGCAGATGTCAGTATACAAAACATAATCAATCCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp ATAATACTTCCTGTCTCTCCAAAACGTGACTCCGAGACAAATGACAGGAGGACGACAAGACCCTTAAGATaGTTGGAAAATTCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: IILPVSPKRDSETNDRRTTRPLR*LENSSK
Trigger: TTTTGAGGAATTTTCCAAGCATCTTAAGGGTCTTGT...CGTCCTCCTGTCATTTGTCTCGGAGTCACGTTTTGGAGAGACAGGAAGTATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp ATTGCCCAGGGATTGATTATGTTTTGTATACTGACATCTGCTGGGACCAGTGAGGGAACATTCTTTTCATaGAAAATGATAGGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: IAQGLIMFCILTSAGTSEGTFFS*KMIGEA
Trigger: TGCCTCTCCTATCATTTTGCATGAAAAGAATGTTCC...CTCACTGGTCCCAGCAGATGTCAGTATACAAAACATAATCAATCCCTGGGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp ACAAAATGCTGGGATGTAGACTTTTGGCACATTGTGGAAGTAGGAGAACTATTATCTTATGCTTCTCAGTaGTGTACTCTGGAAGTGGTC +
Preference number: 4 (lower is better)
Translates to: TKCWDVDFWHIVEVGELLSYASQ*CTLEVV
Trigger: GACCACTTCCAGAGTACAGCACTGAGAAGCATAAGA...TAATAGTTCTCCTACTTCCACAATGTGCCAAAAGTCTACATCCCAGCATTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp ACAACCAACCACATGGTTTCGGCAGCAGGGTCTAGATGTATGTTTATAAATGTACTCCAAGGTCTGTTCTaGTTAAATTTTGCATGGAGC +
Preference number: 4 (lower is better)
Translates to: TTNHMVSAAGSRCMFINVLQGLF*LNFAWS
Trigger: GCTCCATGCAAAATTTAACCAGAACAGACCTTGGAG...TACATTTATAAACATACATCTAGACCCTGCTGCCGAAACCATGTGGTTGGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp TCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAATGTATTGCTTTTGATACTGGAATTGGCTaGGGAAATTTCAAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: SPTGEQPSCECIKECIAFDTGIG*GNFKKK
Trigger: TTTCTTCTTGAAATTTCCCCAGCCAATTCCAGTATC...AAAAGCAATACATTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp ATTGCCCAGGGATTGATTATGTTTTGTATACTGACATCTGCTGGGACCAGTGAGGATACTGGAATTGGCTaGGGAAATTTCAAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: IAQGLIMFCILTSAGTSEDTGIG*GNFKKK
Trigger: TTTCTTCTTGAAATTTCCCCAGCCAATTCCAGTATC...CTCACTGGTCCCAGCAGATGTCAGTATACAAAACATAATCAATCCCTGGGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CACCCCTCGGGTTGGTTTACATATATCATTAGTTTCTCCTCTGGACGTGTCTGTTTTAGATACTGGAATTaGCTGGGGAAATTTCAAGAA +
Preference number: 4 (lower is better)
Translates to: HPSGWFTYIISFSSGRVCFRYWN*LGKFQE
Trigger: TTCTTGAAATTTCCCCAGCCAATTCCAGTATCTAAA...ACAGACACGTCCAGAGGAGAAACTAATGATATATGTAAACCAACCCGAGGGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp ATTGCCCAGGGATTGATTATGTTTTGTATACTGACATCTGCTGGGACCAGTGAGTCATCGTCACAGGAATaGACATACATCTTTGAACAA +
Preference number: 4 (lower is better)
Translates to: IAQGLIMFCILTSAGTSESSSQE*TYIFEQ
Trigger: TTGTTCAAAGATGTATGTCCATTCCTGTGACGATGA...CTCACTGGTCCCAGCAGATGTCAGTATACAAAACATAATCAATCCCTGGGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp ATTTCTCTATTTATGAGGTCTTCCTTTGATGTCCCTCAGAATCCAGACTCAGACAGGGTTGAGAAATCCTaGGCAGGGTTATCTTTAAGA +
Preference number: 4 (lower is better)
Translates to: ISLFMRSSFDVPQNPDSDRVEKS*AGLSLR
Trigger: TCTTAAAGATAACCCTGCCCAGGATTTCTCAACCCT...GTCTGAGTCTGGATTCTGAGGGACATCAAAGGAAGACCTCATAAATAGAGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp ACAAAATGCTGGGATGTAGACTTTTGGCACATTGTGGAAGTAGGAGAACTATTACTCTTCTCCATTACTTaGCGCACAAGCTTAATGGTT +
Preference number: 4 (lower is better)
Translates to: TKCWDVDFWHIVEVGELLLFSIT*RTSLMV
Trigger: AACCATTAAGCTTGTGCGTCAAGTAATGGAGAAGAG...TAATAGTTCTCCTACTTCCACAATGTGCCAAAAGTCTACATCCCAGCATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CATTTTCCCAACCTAGTTTCTAAGATAATACTTCCTGTCTCTCCAAAACGTGACGCAAAGATGTTACTTTaGGAGCCTTCTGCAATGTCT +
Preference number: 4 (lower is better)
Translates to: HFPNLVSKIILPVSPKRDAKMLL*EPSAMS
Trigger: AGACATTGCAGAAGGCTCTCAAAGTAACATCTTTGC...GTCACGTTTTGGAGAGACAGGAAGTATTATCTTAGAAACTAGGTTGGGAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp AGGAAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCCACATAGAACATATCTaGCGTGATGTAACACTCAGT +
Preference number: 4 (lower is better)
Translates to: RKIQFKSYHPQAGFGNYIHIEHI*RDVTLS
Trigger: ACTGAGTGTTACATCACGTCAGATATGTTCTATGTG...GATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp CATTTTCCCAACCTAGTTTCTAAGATAATACTTCCTGTCTCTCCAAAACGTGACAAACATAGGGTTCTGTaGGTCGACATCCATGGAAAA +
Preference number: 4 (lower is better)
Translates to: HFPNLVSKIILPVSPKRDKHRVL*VDIHGK
Trigger: TTTTCCATGGATGTCGACTCACAGAACCCTATGTTT...GTCACGTTTTGGAGAGACAGGAAGTATTATCTTAGAAACTAGGTTGGGAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp AAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCAACAAATCAGGATTaGAATCTACTCCATCAGGGA +
Preference number: 4 (lower is better)
Translates to: KIQFKSYHPQAGFGNYIRSTNQD*NLLHQG
Trigger: TCCCTGATGGAGTAGATTTCAATCCTGATTTGTTGA...CCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp CATTTTCCCAACCTAGTTTCTAAGATAATACTTCCTGTCTCTCCAAAACGTGACTTCTTTTCCCTTAACTaGTGTACAAGCTCTGGACAG +
Preference number: 4 (lower is better)
Translates to: HFPNLVSKIILPVSPKRDFFSLN*CTSSGQ
Trigger: CTGTCCAGAGCTTGTACAGCAGTTAAGGGAAAAGAA...GTCACGTTTTGGAGAGACAGGAAGTATTATCTTAGAAACTAGGTTGGGAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp CACATGGTTTCGGCAGCAGGGTCTAGATGTATGTTTATAAATGTACCCAGCTTGACAAGACCCTTAAGATaGTTGGAAAATTCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: HMVSAAGSRCMFINVPSLTRPLR*LENSSK
Trigger: TTTTGAGGAATTTTCCAAGCATCTTAAGGGTCTTGT...CAAGCTGGGTACATTTATAAACATACATCTAGACCCTGCTGCCGAAACCATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp AGGAAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCACAACGGGATTCCTGTaGAATTTTGCAGTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: RKIQFKSYHPQAGFGNYITTGFL*NFAVSE
Trigger: TTCAGAAACTGCAAAATTGCACAGGAATCCCGTTGT...GATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp ATTCCTATGGTGTCTGAACCCTGTGAAAAACCTCCAAAGATAATAGTTTTGGTTACATGTGTTGAGTCTTaGACATCCATCACCACACAC +
Preference number: 4 (lower is better)
Translates to: IPMVSEPCEKPPKIIVLVTCVES*TSITTH
Trigger: GTGTGTGGTGATGGATGTGCAAGACTCAACACATGT...AACCAAAACTATTATCTTTGGAGGTTTTTCACAGGGTTCAGACACCATAGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp ACAACCAACCACATGGTTTCGGCAGCAGGGTCTAGATGTATGTTTATAAATGTACCGTTCCCTGTGATTTaGAACAAACTGGTAAGAATT +
Preference number: 4 (lower is better)
Translates to: TTNHMVSAAGSRCMFINVPFPVI*NKLVRI
Trigger: AATTCTTACCAGTTTGTTGCAAATCACAGGGAACGG...TACATTTATAAACATACATCTAGACCCTGCTGCCGAAACCATGTGGTTGGTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp TTTCTGGCAAAGAAATATGACTTGTTTCTGAACAACCAACCACATGGTTTCGGCCTGGTAACCACCCCATaGTTCAATTTATCTATGACA +
Preference number: 4 (lower is better)
Translates to: FLAKKYDLFLNNQPHGFGLVTTP*FNLSMT
Trigger: TGTCATAGATAAATTGAAGCATGGGGTGGTTACCAG...GCCGAAACCATGTGGTTGGTTGTTCAGAAACAAGTCATATTTCTTTGCCAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp AAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGACGATCAGTCATTGCTaGCAAAGATGTTACTTTGAG +
Preference number: 4 (lower is better)
Translates to: KIQFKSYHPQAGFGNYIRTISHC*QRCYFE
Trigger: CTCAAAGTAACATCTTTGCCAGCAATGACTGATCGT...CCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp AAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGCAGTTTGTTGTCCCCTaGGAGATTATACAGATTAAC +
Preference number: 4 (lower is better)
Translates to: KIQFKSYHPQAGFGNYIRQFVVP*EIIQIN
Trigger: GTTAATCTGTATAATCTCCCAGGGGACAACAAACTG...CCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp TCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAATGTATTGCTTTTAAATGCTTTAGATACTaGAATTGGCTGGGGAAATTT +
Preference number: 4 (lower is better)
Translates to: SPTGEQPSCECIKECIAFKCFRY*NWLGKF
Trigger: AAATTTCCCCAGCCAATTCCAGTATCTAAAGCATTT...AAAAGCAATACATTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp TTTCTGGCAAAGAAATATGACTTGTTTCTGAACAACCAACCACATGGTTTCGGCTGCAATAAGGTCAGCTaGATCAGTGTATGGATTTTC +
Preference number: 4 (lower is better)
Translates to: FLAKKYDLFLNNQPHGFGCNKVS*ISVWIF
Trigger: GAAAATCCATACACTGATCCAGCTGACCTTATTGCA...GCCGAAACCATGTGGTTGGTTGTTCAGAAACAAGTCATATTTCTTTGCCAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp TACATCAGAGCAGATTTTTGTCCAAAGACCCTTAACATGAAGCCCAAAGACAGATGCAATAAGGTCAGCTaGATCAGTGTATGGATTTTC +
Preference number: 4 (lower is better)
Translates to: YIRADFCPKTLNMKPKDRCNKVS*ISVWIF
Trigger: GAAAATCCATACACTGATCCAGCTGACCTTATTGCA...TCTGTCTTTGGGCTTCATGTTAAGGGTCTTTGGACAAAAATCTGCTCTGATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp AAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGATGGACATACATCTTTaGACAACTTTGGCAATGAAG +
Preference number: 4 (lower is better)
Translates to: KIQFKSYHPQAGFGNYIRMDIHL*TTLAMK
Trigger: CTTCATTGCCAAAGTTGTTCAAAGATGTATGTCCAT...CCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR TCA 90 bp ACAAAATGCTGGGATGTAGACTTTTGGCACATTGTGGAAGTAGGAGAACTATTATCAACAAATCAGGATTaGAATCTACTCCATCAGGGA +
Preference number: 4 (lower is better)
Translates to: TKCWDVDFWHIVEVGELLSTNQD*NLLHQG
Trigger: TCCCTGATGGAGTAGATTTCAATCCTGATTTGTTGA...TAATAGTTCTCCTACTTCCACAATGTGCCAAAAGTCTACATCCCAGCATTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp AGGAAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCCAAACGATCAGTCATTaGTGGCAAAGATGTTACTTT +
Preference number: 4 (lower is better)
Translates to: RKIQFKSYHPQAGFGNYIQTISH*WQRCYF
Trigger: AAAGTAACATCTTTGCCAGCAATGACTGATCGTTTG...GATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp AAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGGGAACATTCTTTTCATaGAAAATGATAGGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: KIQFKSYHPQAGFGNYIRGTFFS*KMIGEA
Trigger: TGCCTCTCCTATCATTTTGCATGAAAAGAATGTTCC...CCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CATTTTCCCAACCTAGTTTCTAAGATAATACTTCCTGTCTCTCCAAAACGTGACACGATCAGTCATTGCTaGCAAAGATGTTACTTTGAG +
Preference number: 4 (lower is better)
Translates to: HFPNLVSKIILPVSPKRDTISHC*QRCYFE
Trigger: CTCAAAGTAACATCTTTGCCAGCAATGACTGATCGT...GTCACGTTTTGGAGAGACAGGAAGTATTATCTTAGAAACTAGGTTGGGAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp ATTTCTCTATTTATGAGGTCTTCCTTTGATGTCCCTCAGAATCCAGACTCAGACTCCTGTTCTAAGGATTaGAGAGCCAGATACATTTTA +
Preference number: 4 (lower is better)
Translates to: ISLFMRSSFDVPQNPDSDSCSKD*RARYIL
Trigger: TAAAATGTATCTGGCTCTCCAATCCTTAGAACAGGA...GTCTGAGTCTGGATTCTGAGGGACATCAAAGGAAGACCTCATAAATAGAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CATTTTCCCAACCTAGTTTCTAAGATAATACTTCCTGTCTCTCCAAAACGTGACTTGGAGGACATGGGATaGTTAGAAGAATTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: HFPNLVSKIILPVSPKRDLEDMG*LEEFVL
Trigger: AAGCACAAATTCTTCTAACCATCCCATGTCCTCCAA...GTCACGTTTTGGAGAGACAGGAAGTATTATCTTAGAAACTAGGTTGGGAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR GCA 90 bp AGGAAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCCAGTTTCTGAACAAATaGTTTAGATACTGGAATTGG +
Preference number: 4 (lower is better)
Translates to: RKIQFKSYHPQAGFGNYIQFLNK*FRYWNW
Trigger: CCAATTCCAGTATCTAAAGCATTTGTTCAGAAACTG...GATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp ATTCCTATGGTGTCTGAACCCTGTGAAAAACCTCCAAAGATAATAGTTTTGGTTCAGTTTGTTGTCCCCTaGGAGATTATACAGATTAAC +
Preference number: 4 (lower is better)
Translates to: IPMVSEPCEKPPKIIVLVQFVVP*EIIQIN
Trigger: GTTAATCTGTATAATCTCCCAGGGGACAACAAACTG...AACCAAAACTATTATCTTTGGAGGTTTTTCACAGGGTTCAGACACCATAGGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CATTTTCCCAACCTAGTTTCTAAGATAATACTTCCTGTCTCTCCAAAACGTGACTCCTGTTCTAAGGATTaGAGAGCCAGATACATTTTA +
Preference number: 4 (lower is better)
Translates to: HFPNLVSKIILPVSPKRDSCSKD*RARYIL
Trigger: TAAAATGTATCTGGCTCTCCAATCCTTAGAACAGGA...GTCACGTTTTGGAGAGACAGGAAGTATTATCTTAGAAACTAGGTTGGGAAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp ACAACCAACCACATGGTTTCGGCAGCAGGGTCTAGATGTATGTTTATAAATGTAAAATGCTTTAGATACTaGAATTGGCTGGGGAAATTT +
Preference number: 4 (lower is better)
Translates to: TTNHMVSAAGSRCMFINVKCFRY*NWLGKF
Trigger: AAATTTCCCCAGCCAATTCCAGTATCTAAAGCATTT...TACATTTATAAACATACATCTAGACCCTGCTGCCGAAACCATGTGGTTGGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp GGAAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAAAATGCTTTAGATACTaGAATTGGCTGGGGAAATTT +
Preference number: 4 (lower is better)
Translates to: GKSNSRVITLKLALAITSKCFRY*NWLGKF
Trigger: AAATTTCCCCAGCCAATTCCAGTATCTAAAGCATTT...TGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR CCA 90 bp CATTTTCCCAACCTAGTTTCTAAGATAATACTTCCTGTCTCTCCAAAACGTGACTTTAGATACTGGAATTaGCTGGGGAAATTTCAAGAA +
Preference number: 4 (lower is better)
Translates to: HFPNLVSKIILPVSPKRDFRYWN*LGKFQE
Trigger: TTCTTGAAATTTCCCCAGCCAATTCCAGTATCTAAA...GTCACGTTTTGGAGAGACAGGAAGTATTATCTTAGAAACTAGGTTGGGAAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS CCA 90 bp GAGCATCGGGTGGTTCTTGGTGTTGCCGGCCATCGAAGAGACAGGTaGCGGCGTGTGATGAGGAGGGGTCGGACTCGAGCCAATGGTAGA +
Preference number: 5 (lower is better)
Translates to: EHRVVLGVAGHRRDR*RRVMRRGRTRANGR
Trigger: TCTACCATTGGCTCGAGTCCGACCCCTCCTCATCACACGCCGCCACCTGTCTCTTCGATGGCCGGCAACACCAAGAACCACCCGATGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 90 bp GGACAGTCGGACCATCCTCTGAATACTGGGCTGGGGGTGAGACACTaGCTGTGGGTACGTTGCTGGGGGAGTGCTACACTGGCTTGGAGC +
Preference number: 5 (lower is better)
Translates to: GQSDHPLNTGLGVRH*LWVRCWGSATLAWS
Trigger: GCTCCAAGCCAGTGTAGCACTCCCCCAGCAACGTACCCACAGCCAGTGTCTCACCCCCAGCCCAGTATTCAGAGGATGGTCCGACTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 90 bp TGGCTGTGGGTACGTTGCTGGGGGAGTGCTACACTGGCTTGGAGCTaGGGTGATATGAGGTGTATCCAGCGCGTCAGCGGTCATGCTGAC +
Preference number: 5 (lower is better)
Translates to: WLWVRCWGSATLAWS*GDMRCIQRVSGHAD
Trigger: GTCAGCATGACCGCTGACGCGCTGGATACACCTCATATCACCCCAGCTCCAAGCCAGTGTAGCACTCCCCCAGCAACGTACCCACAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 90 bp GGCCAATGCTGTCTGAACTGGACAGTCGGACCATCCTCTGAATACTaGGCTGGGGGTGAGACACTGGCTGTGGGTACGTTGCTGGGGGAG +
Preference number: 5 (lower is better)
Translates to: GQCCLNWTVGPSSEY*AGGETLAVGTLLGE
Trigger: CTCCCCCAGCAACGTACCCACAGCCAGTGTCTCACCCCCAGCCCAGTATTCAGAGGATGGTCCGACTGTCCAGTTCAGACAGCATTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS GCA 90 bp TTGGAGGCTTATCCTTGCTCTTCCCATCATTGGAGGGAGTGCGGCTaGGCTTGCCTGGCTTGCTGTCTGACCCTGGACCTGATCCACTGC +
Preference number: 5 (lower is better)
Translates to: LEAYPCSSHHWRECG*ACLACCLTLDLIHC
Trigger: GCAGTGGATCAGGTCCAGGGTCAGACAGCAAGCCAGGCAAGCGCAGCCGCACTCCCTCCAATGATGGGAAGAGCAAGGATAAGCCTCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS GCA 90 bp TCCGCTTTGGAGGCTTATCCTTGCTCTTCCCATCATTGGAGGGAGTaGGGCTGCGCTTGCCTGGCTTGCTGTCTGACCCTGGACCTGATC +
Preference number: 5 (lower is better)
Translates to: SALEAYPCSSHHWRE*GCACLACCLTLDLI
Trigger: GATCAGGTCCAGGGTCAGACAGCAAGCCAGGCAAGCGCAGCCGCACTCCCTCCAATGATGGGAAGAGCAAGGATAAGCCTCCAAAGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 90 bp AGACACTGGCTGTGGGTACGTTGCTGGGGGAGTGCTACACTGGCTTaGAGCTGGGGTGATATGAGGTGTATCCAGCGCGTCAGCGGTCAT +
Preference number: 5 (lower is better)
Translates to: RHWLWVRCWGSATLA*SWGDMRCIQRVSGH
Trigger: ATGACCGCTGACGCGCTGGATACACCTCATATCACCCCAGCTCCAAGCCAGTGTAGCACTCCCCCAGCAACGTACCCACAGCCAGTGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 90 bp CTGCCTTCTTCCGCTTTGGAGGCTTATCCTTGCTCTTCCCATCATTaGAGGGAGTGCGGCTGCGCTTGCCTGGCTTGCTGTCTGACCCTG +
Preference number: 5 (lower is better)
Translates to: LPSSALEAYPCSSHH*RECGCACLACCLTL
Trigger: CAGGGTCAGACAGCAAGCCAGGCAAGCGCAGCCGCACTCCCTCCAATGATGGGAAGAGCAAGGATAAGCCTCCAAAGCGGAAGAAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS GCA 90 bp ACTTCCCCTCAGTGTCTGCCTTCTTCCGCTTTGGAGGCTTATCCTTaGTCTTCCCATCATTGGAGGGAGTGCGGCTGCGCTTGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: TSPQCLPSSALEAYP*SSHHWRECGCACLA
Trigger: AGCCAGGCAAGCGCAGCCGCACTCCCTCCAATGATGGGAAGAGCAAGGATAAGCCTCCAAAGCGGAAGAAGGCAGACACTGAGGGGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 90 bp GGTGCTTGGGTTTGTCAGGTGGGACTCTTGACGACTTCTTCTTCTTaGCCTTGTTGCTCCCCGAGCACATTTCCATCCGGGGTGATCCGG +
Preference number: 5 (lower is better)
Translates to: GAWVCQVGLLTTSSS*PCCSPSTFPSGVIR
Trigger: CCGGATCACCCCGGATGGAAATGTGCTCGGGGAGCAACAAGGCCAAGAAGAAGAAGTCGTCAAGAGTCCCACCTGACAAACCCAAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp TGTCAAAGTCCTTCCCGTGCCCATGCTTCCAATGGGCATCTCCCACAGGTGAGCGACGACTTCTTCTTCTaGGCCTTGTTGCTCCCCGAG +
Preference number: 5 (lower is better)
Translates to: CQSPSRAHASNGHLPQVSDDFFF*ALLLPE
Trigger: CTCGGGGAGCAACAAGGCCAAGAAGAAGAAGTCGTC...GCTCACCTGTGGGAGATGCCCATTGGAAGCATGGGCACGGGAAGGACTTTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp TTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAAGGAGTGCGGCTGCGCTaGCCTGGCTTGCTGTCTGAC +
Preference number: 5 (lower is better)
Translates to: FQWASPTGEQPSCECIKEGVRLR*PGLLSD
Trigger: GTCAGACAGCAAGCCAGGCAAGCGCAGCCGCACTCC...TTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp CCACCAGGCGAGCCTTGCTACCTGCCTCCTACTGTTCTGAACCATAACCTTCATAGCGTCACTTTGGCTTaGATGCTCGGGGAGCCTCCG +
Preference number: 5 (lower is better)
Translates to: PPGEPCYLPPTVLNHNLHSVTLA*MLGEPP
Trigger: CGGAGGCTCCCCGAGCATCAAAGCCAAAGTGACGCT...ATGAAGGTTATGGTTCAGAACAGTAGGAGGCAGGTAGCAAGGCTCGCCTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS TCA 90 bp TACGTTGCTGGGGGAGTGCTACACTGGCTTGGAGCTGGGGTGATATaGGGTGTATCCAGCGCGTCAGCGGTCATGCTGACGTCAAACATA +
Preference number: 5 (lower is better)
Translates to: YVAGGVLHWLGAGVI*GVSSASAVMLTSNI
Trigger: TATGTTTGACGTCAGCATGACCGCTGACGCGCTGGATACACCTCATATCACCCCAGCTCCAAGCCAGTGTAGCACTCCCCCAGCAACGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 90 bp ACTGTGAGATGGGGACTTCCCCTCAGTGTCTGCCTTCTTCCGCTTTaGAGGCTTATCCTTGCTCTTCCCATCATTGGAGGGAGTGCGGCT +
Preference number: 5 (lower is better)
Translates to: TVRWGLPLSVCLLPL*RLILALPIIGGSAA
Trigger: AGCCGCACTCCCTCCAATGATGGGAAGAGCAAGGATAAGCCTCCAAAGCGGAAGAAGGCAGACACTGAGGGGAAGTCCCCATCTCACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp CCGTGCCCATGCTTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAATTCTTCTTGGCCTTGTaGCTCCCCGAGCACATTTCC +
Preference number: 5 (lower is better)
Translates to: PCPCFQWASPTGEQPSCEFFLAL*LPEHIS
Trigger: GGAAATGTGCTCGGGGAGCAACAAGGCCAAGAAGAA...TTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAAGCATGGGCACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp CCATGCCCTTTAGGGCTCTTAAGCACTGACAGGGCCTGTCTGACTCACCCCTCGGTAGGAGAATCACTATaGGGGCTTCCAGCAGCATCT +
Preference number: 5 (lower is better)
Translates to: PCPLGLLSTDRACLTHPSVGESL*GLPAAS
Trigger: AGATGCTGCTGGAAGCCCCAATAGTGATTCTCCTAC...CGAGGGGTGAGTCAGACAGGCCCTGTCAGTGCTTAAGAGCCCTAAAGGGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp TGTCAAAGTCCTTCCCGTGCCCATGCTTCCAATGGGCATCTCCCACAGGTGAGCCTGCCTTCTTCCGCTTaGGAGGCTTATCCTTGCTCT +
Preference number: 5 (lower is better)
Translates to: CQSPSRAHASNGHLPQVSLPSSA*EAYPCS
Trigger: AGAGCAAGGATAAGCCTCCAAAGCGGAAGAAGGCAG...GCTCACCTGTGGGAGATGCCCATTGGAAGCATGGGCACGGGAAGGACTTTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS GCA 90 bp GTTTGTCAGGTGGGACTCTTGACGACTTCTTCTTCTTGGCCTTGTTaGTCCCCGAGCACATTTCCATCCGGGGTGATCCGGAAGAGGAGT +
Preference number: 5 (lower is better)
Translates to: VCQVGLLTTSSSWPC*SPSTFPSGVIRKRS
Trigger: ACTCCTCTTCCGGATCACCCCGGATGGAAATGTGCTCGGGGAGCAACAAGGCCAAGAAGAAGAAGTCGTCAAGAGTCCCACCTGACAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS GCA 90 bp GGGCACTCTGAGAATGCCCAGAACTTGAGGAATCTCGAACAGGGGTaGCAATTGGTGGGCAGTCATCACTCGTGCTGGGAAGCTTTGAAG +
Preference number: 5 (lower is better)
Translates to: GHSENAQNLRNLEQG*QLVGSHHSCWEALK
Trigger: CTTCAAAGCTTCCCAGCACGAGTGATGACTGCCCACCAATTGGCACCCCTGTTCGAGATTCCTCAAGTTCTGGGCATTCTCAGAGTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 90 bp AGTGGTACCACTCATTGGGTTGTTGCCTGTGGTCATGCCATACCCTaGGCTGCTAGCCGGGGGCAGGTTCTTTTTCACCATGTCTTCAAC +
Preference number: 5 (lower is better)
Translates to: SGTTHWVVACGHAIP*AASRGQVLFHHVFN
Trigger: GTTGAAGACATGGTGAAAAAGAACCTGCCCCCGGCTAGCAGCCCAGGGTATGGCATGACCACAGGCAACAACCCAATGAGTGGTACCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 90 bp AAATCCTGGGCAGGGTTATCTTTAAGAAGGTTCATGAGCATCGGGTaGTTCTTGGTGTTGCCGGCCATCGAAGAGACAGGTGGCGGCGTG +
Preference number: 5 (lower is better)
Translates to: KSWAGLSLRRFMSIG*FLVLPAIEETGGGV
Trigger: CACGCCGCCACCTGTCTCTTCGATGGCCGGCAACACCAAGAACCACCCGATGCTCATGAACCTTCTTAAAGATAACCCTGCCCAGGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp CCGTGCCCATGCTTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAATTCTTCTTCTTGGCCTaGTTGCTCCCCGAGCACATT +
Preference number: 5 (lower is better)
Translates to: PCPCFQWASPTGEQPSCEFFFLA*LLPEHI
Trigger: AATGTGCTCGGGGAGCAACAAGGCCAAGAAGAAGAA...TTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAAGCATGGGCACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp GACACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCACTGGCTGTGGGTACGTaGCTGGGGGAGTGCTACACT +
Preference number: 5 (lower is better)
Translates to: DTKHCFQCPELSKSFPCPLAVGT*LGECYT
Trigger: AGTGTAGCACTCCCCCAGCAACGTACCCACAGCCAG...TGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp CCATGCCCTTTAGGGCTCTTAAGCACTGACAGGGCCTGTCTGACTCACCCCTCGTCGTGCTGGGAAGCTTaGAAGCTTCTTCGGCAATAT +
Preference number: 5 (lower is better)
Translates to: PCPLGLLSTDRACLTHPSSCWEA*KLLRQY
Trigger: ATATTGCCGAAGAAGCTTCAAAGCTTCCCAGCACGA...CGAGGGGTGAGTCAGACAGGCCCTGTCAGTGCTTAAGAGCCCTAAAGGGCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp CTGTTTCTCCAAAAAGGTCCGACTGTGTGCTACACGGTAGCAAGGGTTATCTTCCTGCGCTTGCCTGGCTaGCTGTCTGACCCTGGACCT +
Preference number: 5 (lower is better)
Translates to: LFLQKGPTVCYTVARVIFLRLPG*LSDPGP
Trigger: AGGTCCAGGGTCAGACAGCAAGCCAGGCAAGCGCAG...GAAGATAACCCTTGCTACCGTGTAGCACACAGTCGGACCTTTTTGGAGAAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp ATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCCCCTTGGGAGTGCGGCTGCGCTaGCCTGGCTTGCTGTCTGAC +
Preference number: 5 (lower is better)
Translates to: IQELSPSSWLWQLHQVPLGVRLR*PGLLSD
Trigger: GTCAGACAGCAAGCCAGGCAAGCGCAGCCGCACTCC...CAAGGGGACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS TCA 90 bp ATGCTTCTCAGTGCTGTACTCTGGAAGTGGTCGGATACCATCCTCTaGGCTGGGACTGTTCTGGTAGGATCTCTCTGCTATGGAGGAGCC +
Preference number: 5 (lower is better)
Translates to: MLLSAVLWKWSDTIL*AGTVLVGSLCYGGA
Trigger: GGCTCCTCCATAGCAGAGAGATCCTACCAGAACAGTCCCAGCTCAGAGGATGGTATCCGACCACTTCCAGAGTACAGCACTGAGAAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 90 bp CGTGCTGGTAGGTGGGGTGAAAGGTCTATTAGAAGAACTGTGAGATaGGGACTTCCCCTCAGTGTCTGCCTTCTTCCGCTTTGGAGGCTT +
Preference number: 5 (lower is better)
Translates to: RAGRWGERSIRRTVR*GLPLSVCLLPLWRL
Trigger: AAGCCTCCAAAGCGGAAGAAGGCAGACACTGAGGGGAAGTCCCCATCTCACAGTTCTTCTAATAGACCTTTCACCCCACCTACCAGCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 90 bp TCTCAGTGCTGTACTCTGGAAGTGGTCGGATACCATCCTCTGAGCTaGGACTGTTCTGGTAGGATCTCTCTGCTATGGAGGAGCCTGACT +
Preference number: 5 (lower is better)
Translates to: SQCCTLEVVGYHPLS*DCSGRISLLWRSLT
Trigger: AGTCAGGCTCCTCCATAGCAGAGAGATCCTACCAGAACAGTCCCAGCTCAGAGGATGGTATCCGACCACTTCCAGAGTACAGCACTGAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp TTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAAGGGTGGTTCTTGGTGTaGCCGGCCATCGAAGAGACA +
Preference number: 5 (lower is better)
Translates to: FQWASPTGEQPSCECIKEGWFLV*PAIEET
Trigger: TGTCTCTTCGATGGCCGGCAACACCAAGAACCACCC...TTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp TCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCTTCCAATGGGCATCTCCCACTGCTTCCATAAAGGGTaGAGAAATCCTGGGCAGGGT +
Preference number: 5 (lower is better)
Translates to: SRTVKVLPVPMLPMGISHCFHKG*RNPGQG
Trigger: ACCCTGCCCAGGATTTCTCAACCCTTTATGGAAGCA...GTGGGAGATGCCCATTGGAAGCATGGGCACGGGAAGGACTTTGACAGTTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp TGTCAAAGTCCTTCCCGTGCCCATGCTTCCAATGGGCATCTCCCACAGGTGAGCTTTGGAGGCTTATCCTaGCTCTTCCCATCATTGGAG +
Preference number: 5 (lower is better)
Translates to: CQSPSRAHASNGHLPQVSFGGLS*LFPSLE
Trigger: CTCCAATGATGGGAAGAGCAAGGATAAGCCTCCAAA...GCTCACCTGTGGGAGATGCCCATTGGAAGCATGGGCACGGGAAGGACTTTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp CCACCAGGCGAGCCTTGCTACCTGCCTCCTACTGTTCTGAACCATAACCTTCATGGATCCAGAAGACCCTaGGCTAGCATACATACTGCC +
Preference number: 5 (lower is better)
Translates to: PPGEPCYLPPTVLNHNLHGSRRP*ASIHTA
Trigger: GGCAGTATGTATGCTAGCCAAGGGTCTTCTGGATCC...ATGAAGGTTATGGTTCAGAACAGTAGGAGGCAGGTAGCAAGGCTCGCCTGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp TTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAAAGCCTCCGGGAGGCCTaGAATGGGAAGGGGATATGT +
Preference number: 5 (lower is better)
Translates to: FQWASPTGEQPSCECIKESLREA*NGKGIC
Trigger: ACATATCCCCTTCCCATTCAAGGCCTCCCGGAGGCT...TTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp TCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCTTCCAATGGGCATCTCCCACTCACTTTTCTCACGTTaGCTCTGGAACTCCCCTCCT +
Preference number: 5 (lower is better)
Translates to: SRTVKVLPVPMLPMGISHSLFSR*LWNSPP
Trigger: AGGAGGGGAGTTCCAGAGCAAACGTGAGAAAAGTGA...GTGGGAGATGCCCATTGGAAGCATGGGCACGGGAAGGACTTTGACAGTTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp CAGATCCCAAACGGAATCATCAGGAATGGCACAGTGCAGGTGGTGAAATCAAAGAGCGTCACTTTGGCTTaGATGCTCGGGGAGCCTCCG +
Preference number: 5 (lower is better)
Translates to: QIPNGIIRNGTVQVVKSKSVTLA*MLGEPP
Trigger: CGGAGGCTCCCCGAGCATCAAAGCCAAAGTGACGCT...CTTTGATTTCACCACCTGCACTGTGCCATTCCTGATGATTCCGTTTGGGATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS TCA 90 bp ATCCAGCGCGTCAGCGGTCATGCTGACGTCAAACATAGGGTTCTGTaGGTCGACATCCATGGAAAAGAGCTCCCTCTGGAAATCGTCTTC +
Preference number: 5 (lower is better)
Translates to: IQRVSGHADVKHRVL*VDIHGKELPLEIVF
Trigger: GAAGACGATTTCCAGAGGGAGCTCTTTTCCATGGATGTCGACTCACAGAACCCTATGTTTGACGTCAGCATGACCGCTGACGCGCTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp TGTCAAAGTCCTTCCCGTGCCCATGCTTCCAATGGGCATCTCCCACAGGTGAGCCCTCTTCTCCATTACTaGACGCACAAGCTTAATGGT +
Preference number: 5 (lower is better)
Translates to: CQSPSRAHASNGHLPQVSPLLHY*THKLNG
Trigger: ACCATTAAGCTTGTGCGTCAAGTAATGGAGAAGAGG...GCTCACCTGTGGGAGATGCCCATTGGAAGCATGGGCACGGGAAGGACTTTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp CCACCAGGCGAGCCTTGCTACCTGCCTCCTACTGTTCTGAACCATAACCTTCATTGCTTCCATAAAGGGTaGAGAAATCCTGGGCAGGGT +
Preference number: 5 (lower is better)
Translates to: PPGEPCYLPPTVLNHNLHCFHKG*RNPGQG
Trigger: ACCCTGCCCAGGATTTCTCAACCCTTTATGGAAGCA...ATGAAGGTTATGGTTCAGAACAGTAGGAGGCAGGTAGCAAGGCTCGCCTGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS TCA 90 bp AACTGCTGTACAAGCTCTGGACAGCTCACAGGATTCTCCCCATGGTaGGCCACTTTGACATCACAAAGCTGTCCTGCAGGATCTAACTGC +
Preference number: 5 (lower is better)
Translates to: NCCTSSGQLTGFSPW*ATLTSQSCPAGSNC
Trigger: GCAGTTAGATCCTGCAGGACAGCTTTGTGATGTCAAAGTGGCTCACCATGGGGAGAATCCTGTGAGCTGTCCAGAGCTTGTACAGCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018304.7
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS CCA 90 bp CTTTCACTGTCCACATTCTGTGGTGTATATGCTGGCGACTTACTGTaGCTGGGAGAACCCCGTTCGTGCTTTGGAGTGGAACCACTGATA +
Preference number: 5 (lower is better)
Translates to: LSLSTFCGVYAGDLL*LGEPRSCFGVEPLI
Trigger: TATCAGTGGTTCCACTCCAAAGCACGAACGGGGTTCTCCCAGCCACAGTAAGTCGCCAGCATATACACCACAGAATGTGGACAGTGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp TCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCTTCCAATGGGCATCTCCCACCAGAGGTTCCTTCAATaGTCACTGAGGCATTCATTC +
Preference number: 5 (lower is better)
Translates to: SRTVKVLPVPMLPMGISHQRFLQ*SLRHSF
Trigger: GAATGAATGCCTCAGTGACAATTGAAGGAACCTCTG...GTGGGAGATGCCCATTGGAAGCATGGGCACGGGAAGGACTTTGACAGTTCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp CCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCTCCACTCATTGGGTTGTaGCCTGTGGTCATGCCATAC +
Preference number: 5 (lower is better)
Translates to: PNIAFSVQNCQSPSRAHAPLIGL*PVVMPY
Trigger: GTATGGCATGACCACAGGCAACAACCCAATGAGTGG...AGCATGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp TTGACTTCATGTCCTTGCCGTCTTTCAAACAGGAGGGTGAGCACACCTGGATGGTTCTTCTTCTTGGCCTaGTTGCTCCCCGAGCACATT +
Preference number: 5 (lower is better)
Translates to: LTSCPCRLSNRRVSTPGWFFFLA*LLPEHI
Trigger: AATGTGCTCGGGGAGCAACAAGGCCAAGAAGAAGAA...CCATCCAGGTGTGCTCACCCTCCTGTTTGAAAGACGGCAAGGACATGAAGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp ACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCGAGAATGCCCAGAACTaGAGGAATCTCGAACAGGGG +
Preference number: 5 (lower is better)
Translates to: TKHCFQCPELSKSFPCPCENAQN*RNLEQG
Trigger: CCCCTGTTCGAGATTCCTCAAGTTCTGGGCATTCTC...GCATGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp TTGACTTCATGTCCTTGCCGTCTTTCAAACAGGAGGGTGAGCACACCTGGATGGAATTTTGGCTCCCCATaGTCACCTCCAAGCATTGGC +
Preference number: 5 (lower is better)
Translates to: LTSCPCRLSNRRVSTPGWNFGSP*SPPSIG
Trigger: GCCAATGCTTGGAGGTGACAATGGGGAGCCAAAATT...CCATCCAGGTGTGCTCACCCTCCTGTTTGAAAGACGGCAAGGACATGAAGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp GACACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCAGGATCCAGAAGACCCTaGGCTAGCATACATACTGCC +
Preference number: 5 (lower is better)
Translates to: DTKHCFQCPELSKSFPCPGSRRP*ASIHTA
Trigger: GGCAGTATGTATGCTAGCCAAGGGTCTTCTGGATCC...TGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp TTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAACTGCTCAGTCCATGTTaGGTAATGGGAGAGGAGCCT +
Preference number: 5 (lower is better)
Translates to: FQWASPTGEQPSCECIKELLSPC*VMGEEP
Trigger: AGGCTCCTCTCCCATTACCAAACATGGACTGAGCAG...TTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp AGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCCCCTTGCTCACCTCTGCTCAGTCCATGTTaGGTAATGGGAGAGGAGCCT +
Preference number: 5 (lower is better)
Translates to: SYHPQAGFGNYIRSPCSPLLSPC*VMGEEP
Trigger: AGGCTCCTCTCCCATTACCAAACATGGACTGAGCAG...AGGTGAGCAAGGGGACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS CCA 90 bp CTTTTTCACCATGTCTTCAACTGTCTCTGCAATGAGAGACAGTGCTaGGGTGTCAGCCTGTATGGTTTCAGCCTTCCTCCGAATAGCCCT +
Preference number: 5 (lower is better)
Translates to: LFHHVFNCLCNERQC*GVSLYGFSLPPNSP
Trigger: AGGGCTATTCGGAGGAAGGCTGAAACCATACAGGCTGACACCCCAGCACTGTCTCTCATTGCAGAGACAGTTGAAGACATGGTGAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000018304.7
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS CCA 90 bp AACATAGGGTTCTGTGAGTCGACATCCATGGAAAAGAGCTCCCTCTaGAAATCGTCTTCAGTCTGGTGCTTGGGTTTGTCAGGTGGGACT +
Preference number: 5 (lower is better)
Translates to: NIGFCESTSMEKSSL*KSSSVWCLGLSGGT
Trigger: AGTCCCACCTGACAAACCCAAGCACCAGACTGAAGACGATTTCCAGAGGGAGCTCTTTTCCATGGATGTCGACTCACAGAACCCTATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp CCACCAGGCGAGCCTTGCTACCTGCCTCCTACTGTTCTGAACCATAACCTTCATGGCAAAGATGTTACTTaGAGAGCCTTCTGCAATGTC +
Preference number: 5 (lower is better)
Translates to: PPGEPCYLPPTVLNHNLHGKDVT*RAFCNV
Trigger: GACATTGCAGAAGGCTCTCAAAGTAACATCTTTGCC...ATGAAGGTTATGGTTCAGAACAGTAGGAGGCAGGTAGCAAGGCTCGCCTGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp AGACACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCGGGGCAATTGGGAGTTaGTACATAGCAGAGGTTCCT +
Preference number: 5 (lower is better)
Translates to: RHQTLLSVSRTVKVLPVPGAIGS*YIAEVP
Trigger: AGGAACCTCTGCTATGTACAAACTCCCAATTGCCCC...GGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp TCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAATGTATTGCTTTTAGCATCGGGTGGTTCTaGGTGTTGCCGGCCATCGAA +
Preference number: 5 (lower is better)
Translates to: SPTGEQPSCECIKECIAFSIGWF*VLPAIE
Trigger: TTCGATGGCCGGCAACACCAAGAACCACCCGATGCT...AAAAGCAATACATTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp CACATGGTTTCGGCAGCAGGGTCTAGATGTATGTTTATAAATGTACCCAGCTTGAGCATCGGGTGGTTCTaGGTGTTGCCGGCCATCGAA +
Preference number: 5 (lower is better)
Translates to: HMVSAAGSRCMFINVPSLSIGWF*VLPAIE
Trigger: TTCGATGGCCGGCAACACCAAGAACCACCCGATGCT...CAAGCTGGGTACATTTATAAACATACATCTAGACCCTGCTGCCGAAACCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp ATAATACTTCCTGTCTCTCCAAAACGTGACTCCGAGACAAATGACAGGAGGACGGACGACTTCTTCTTCTaGGCCTTGTTGCTCCCCGAG +
Preference number: 5 (lower is better)
Translates to: IILPVSPKRDSETNDRRTDDFFF*ALLLPE
Trigger: CTCGGGGAGCAACAAGGCCAAGAAGAAGAAGTCGTC...CGTCCTCCTGTCATTTGTCTCGGAGTCACGTTTTGGAGAGACAGGAAGTATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp ACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCGTAGGAGAATCACTATaGGGGCTTCCAGCAGCATCT +
Preference number: 5 (lower is better)
Translates to: TKHCFQCPELSKSFPCPCVGESL*GLPAAS
Trigger: AGATGCTGCTGGAAGCCCCAATAGTGATTCTCCTAC...GCATGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp CCACCAGGCGAGCCTTGCTACCTGCCTCCTACTGTTCTGAACCATAACCTTCATTGTCACCTCCAAGCATaGGCATCCCCAATGTATTTA +
Preference number: 5 (lower is better)
Translates to: PPGEPCYLPPTVLNHNLHCHLQA*ASPMYL
Trigger: TAAATACATTGGGGATGCCAATGCTTGGAGGTGACA...ATGAAGGTTATGGTTCAGAACAGTAGGAGGCAGGTAGCAAGGCTCGCCTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp CACCCCTCGGGTTGGTTTACATATATCATTAGTTTCTCCTCTGGACGTGTCTGTCTAGCACCTGTGCCGTaGCCTTCCTTCACCCTCTTT +
Preference number: 5 (lower is better)
Translates to: HPSGWFTYIISFSSGRVCLAPVP*PSFTLF
Trigger: AAAGAGGGTGAAGGAAGGCAACGGCACAGGTGCTAG...ACAGACACGTCCAGAGGAGAAACTAATGATATATGTAAACCAACCCGAGGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp ATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCCCCTTGCTAGCACCTGTGCCGTaGCCTTCCTTCACCCTCTTT +
Preference number: 5 (lower is better)
Translates to: IQELSPSSWLWQLHQVPLLAPVP*PSFTLF
Trigger: AAAGAGGGTGAAGGAAGGCAACGGCACAGGTGCTAG...CAAGGGGACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp TTTCTGGCAAAGAAATATGACTTGTTTCTGAACAACCAACCACATGGTTTCGGCCTGCGCTTGCCTGGCTaGCTGTCTGACCCTGGACCT +
Preference number: 5 (lower is better)
Translates to: FLAKKYDLFLNNQPHGFGLRLPG*LSDPGP
Trigger: AGGTCCAGGGTCAGACAGCAAGCCAGGCAAGCGCAG...GCCGAAACCATGTGGTTGGTTGTTCAGAAACAAGTCATATTTCTTTGCCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp GACACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCAGAGAGCCATAGTTCTTaGATGAGGCTATCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: DTKHCFQCPELSKSFPCPESHSS*MRLSVA
Trigger: GGCCACAGATAGCCTCATCAAAGAACTATGGCTCTC...TGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS TCA 90 bp GTGTTCCCTGCAGGCTCTGACCATCAGGAAGAGGAGCATCTTTATTaGGAAAATAGCAGTGCTGCTGACCTGGAAGAGCAGCGTAAAATC +
Preference number: 5 (lower is better)
Translates to: VFPAGSDHQEEEHLY*ENSSAADLEEQRKI
Trigger: GATTTTACGCTGCTCTTCCAGGTCAGCAGCACTGCTATTTTCTCAATAAAGATGCTCCTCTTCCTGATGGTCAGAGCCTGCAGGGAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000018304.7
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS TCA 90 bp GGAGTCATTCACAGGGTGCTGAAAAGATACACTGAAGCGAGATTCTaGGAGAGGACACACTTCAAACTGGAGGAGCCCAGGAGAATCTTC +
Preference number: 5 (lower is better)
Translates to: GVIHRVLKRYTEARF*ERTHFKLEEPRRIF
Trigger: GAAGATTCTCCTGGGCTCCTCCAGTTTGAAGTGTGTCCTCTCTCAGAATCTCGCTTCAGTGTATCTTTTCAGCACCCTGTGAATGACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018304.7
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS TCA 90 bp AAAGACATCAGAATCAAAGAGGGCACTCTGAGAATGCCCAGAACTTaGGGAATCTCGAACAGGGGTGCCAATTGGTGGGCAGTCATCACT +
Preference number: 5 (lower is better)
Translates to: KDIRIKEGTLRMPRT*GISNRGANWWAVIT
Trigger: AGTGATGACTGCCCACCAATTGGCACCCCTGTTCGAGATTCCTCAAGTTCTGGGCATTCTCAGAGTGCCCTCTTTGATTCTGATGTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS GCA 90 bp GTTCTTTTTCACCATGTCTTCAACTGTCTCTGCAATGAGAGACAGTaGTGGGGTGTCAGCCTGTATGGTTTCAGCCTTCCTCCGAATAGC +
Preference number: 5 (lower is better)
Translates to: VLFHHVFNCLCNERQ*WGVSLYGFSLPPNS
Trigger: GCTATTCGGAGGAAGGCTGAAACCATACAGGCTGACACCCCAGCACTGTCTCTCATTGCAGAGACAGTTGAAGACATGGTGAAAAAGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000018304.7
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS GCA 90 bp AGGTCTATTAGAAGAACTGTGAGATGGGGACTTCCCCTCAGTGTCTaGCTTCTTCCGCTTTGGAGGCTTATCCTTGCTCTTCCCATCATT +
Preference number: 5 (lower is better)
Translates to: RSIRRTVRWGLPLSV*LLPLWRLILALPII
Trigger: AATGATGGGAAGAGCAAGGATAAGCCTCCAAAGCGGAAGAAGGCAGACACTGAGGGGAAGTCCCCATCTCACAGTTCTTCTAATAGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 90 bp TATCTGAAAGAATATCAGTTACATCTGGGCCAATGCTGTCTGAACTaGACAGTCGGACCATCCTCTGAATACTGGGCTGGGGGTGAGACA +
Preference number: 5 (lower is better)
Translates to: YLKEYQLHLGQCCLN*TVGPSSEYWAGGET
Trigger: TGTCTCACCCCCAGCCCAGTATTCAGAGGATGGTCCGACTGTCCAGTTCAGACAGCATTGGCCCAGATGTAACTGATATTCTTTCAGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp ATAATACTTCCTGTCTCTCCAAAACGTGACTCCGAGACAAATGACAGGAGGACGGGAAGATCAACACTGTaGGCACTAGTGACTGCGGAG +
Preference number: 5 (lower is better)
Translates to: IILPVSPKRDSETNDRRTGRSTL*ALVTAE
Trigger: CTCCGCAGTCACTAGTGCCAACAGTGTTGATCTTCC...CGTCCTCCTGTCATTTGTCTCGGAGTCACGTTTTGGAGAGACAGGAAGTATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp TTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAATCGTGCTGGGAAGCTTaGAAGCTTCTTCGGCAATAT +
Preference number: 5 (lower is better)
Translates to: FQWASPTGEQPSCECIKESCWEA*KLLRQY
Trigger: ATATTGCCGAAGAAGCTTCAAAGCTTCCCAGCACGA...TTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp CACCACCCCTCTCCCCTTAAGCAAGTAATTTATTCATTGCTTTCTGGCAAAGAAGAACAGGGGTGCCAATaGGTGGGCAGTCATCACTCG +
Preference number: 5 (lower is better)
Translates to: HHPSPLKQVIYSLLSGKEEQGCQ*VGSHHS
Trigger: CGAGTGATGACTGCCCACCAATTGGCACCCCTGTTC...TTCTTTGCCAGAAAGCAATGAATAAATTACTTGCTTAAGGGGAGAGGGGTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp TTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCCCCTTGCCAGGAACAGGCTTCATaGGAGAGGCAAGCTTATCTG +
Preference number: 5 (lower is better)
Translates to: FKSYHPQAGFGNYIRSPCQEQAS*ERQAYL
Trigger: CAGATAAGCTTGCCTCTCCAATGAAGCCTGTTCCTG...GCAAGGGGACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp AGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCCCCTTGCTCACCTCCTGACGTGTTATGTTaGGAGGACATGGGATGGTTA +
Preference number: 5 (lower is better)
Translates to: SYHPQAGFGNYIRSPCSPPDVLC*EDMGWL
Trigger: TAACCATCCCATGTCCTCCAAACATAACACGTCAGG...AGGTGAGCAAGGGGACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp AGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCCCCTTGCTCACCTGTTGACTTCATGTCCTaGCCGTCTTTCAAACAGGAG +
Preference number: 5 (lower is better)
Translates to: SYHPQAGFGNYIRSPCSPVDFMS*PSFKQE
Trigger: CTCCTGTTTGAAAGACGGCAAGGACATGAAGTCAAC...AGGTGAGCAAGGGGACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092735.12
CDS TCA 90 bp TGCACATCCATCACCACACACACAAGGGAGTCATTCACAGGGTGCTaGAAAGATACACTGAAGCGAGATTCTGAGAGAGGACACACTTCA +
Preference number: 5 (lower is better)
Translates to: CTSITTHTRESFTGC*KDTLKRDSERGHTS
Trigger: TGAAGTGTGTCCTCTCTCAGAATCTCGCTTCAGTGTATCTTTTCAGCACCCTGTGAATGACTCCCTTGTGTGTGTGGTGATGGATGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018304.7
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS TCA 90 bp TTTGGCTTACTTATAGAAGGGTTCATAAGGGAGGATGGCTTGCCTTaGGGTTTCATCTTGGTACTGCTGGACCCACTGCTCAGTCCATGT +
Preference number: 5 (lower is better)
Translates to: FGLLIEGFIREDGLP*GFILVLLDPLLSPC
Trigger: ACATGGACTGAGCAGTGGGTCCAGCAGTACCAAGATGAAACCTCAAGGCAAGCCATCCTCCCTTATGAACCCTTCTATAAGTAAGCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS GCA 90 bp AGGAATCTCGAACAGGGGTGCCAATTGGTGGGCAGTCATCACTCGTaGTGGGAAGCTTTGAAGCTTCTTCGGCAATATCTGAAAGAATAT +
Preference number: 5 (lower is better)
Translates to: RNLEQGCQLVGSHHS*WEALKLLRQYLKEY
Trigger: ATATTCTTTCAGATATTGCCGAAGAAGCTTCAAAGCTTCCCAGCACGAGTGATGACTGCCCACCAATTGGCACCCCTGTTCGAGATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS GCA 90 bp CACAAGCTTAATGGTTTCACTCCAAGGTCTGTTCTGGTTAAATTTTaGATGGAGCCGTTCCAGGAGGGAGCTCATCTTACTCAGCCTCTC +
Preference number: 5 (lower is better)
Translates to: HKLNGFTPRSVLVKF*MEPFQEGAHLTQPL
Trigger: GAGAGGCTGAGTAAGATGAGCTCCCTCCTGGAACGGCTCCATGCAAAATTTAACCAGAACAGACCTTGGAGTGAAACCATTAAGCTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS CCA 90 bp AATCTCGAACAGGGGTGCCAATTGGTGGGCAGTCATCACTCGTGCTaGGAAGCTTTGAAGCTTCTTCGGCAATATCTGAAAGAATATCAG +
Preference number: 5 (lower is better)
Translates to: NLEQGCQLVGSHHSC*EALKLLRQYLKEYQ
Trigger: CTGATATTCTTTCAGATATTGCCGAAGAAGCTTCAAAGCTTCCCAGCACGAGTGATGACTGCCCACCAATTGGCACCCCTGTTCGAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 90 bp AGGGGATATGTTTGGCTTACTTATAGAAGGGTTCATAAGGGAGGATaGCTTGCCTTGAGGTTTCATCTTGGTACTGCTGGACCCACTGCT +
Preference number: 5 (lower is better)
Translates to: RGYVWLTYRRVHKGG*LALRFHLGTAGPTA
Trigger: AGCAGTGGGTCCAGCAGTACCAAGATGAAACCTCAAGGCAAGCCATCCTCCCTTATGAACCCTTCTATAAGTAAGCCAAACATATCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 90 bp TTCATTGGAGAGGCAAGCTTATCTGAGCCTCCGGGAGGCCTTGAATaGGAAGGGGATATGTTTGGCTTACTTATAGAAGGGTTCATAAGG +
Preference number: 5 (lower is better)
Translates to: FIGEASLSEPPGGLE*EGDMFGLLIEGFIR
Trigger: CCTTATGAACCCTTCTATAAGTAAGCCAAACATATCCCCTTCCCATTCAAGGCCTCCCGGAGGCTCAGATAAGCTTGCCTCTCCAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 90 bp GCAGAGACCTTGGATTTGTCTTTATCACTTTTCTCACGTTTGCTCTaGAACTCCCCTCCTGACGTGTTATGTTTGGAGGACATGGGATGG +
Preference number: 5 (lower is better)
Translates to: AETLDLSLSLFSRLL*NSPPDVLCLEDMGW
Trigger: CCATCCCATGTCCTCCAAACATAACACGTCAGGAGGGGAGTTCCAGAGCAAACGTGAGAAAAGTGATAAAGACAAATCCAAGGTCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 90 bp AGCTTAATGGTTTCACTCCAAGGTCTGTTCTGGTTAAATTTTGCATaGAGCCGTTCCAGGAGGGAGCTCATCTTACTCAGCCTCTCTGAG +
Preference number: 5 (lower is better)
Translates to: SLMVSLQGLFWLNFA*SRSRRELILLSLSE
Trigger: CTCAGAGAGGCTGAGTAAGATGAGCTCCCTCCTGGAACGGCTCCATGCAAAATTTAACCAGAACAGACCTTGGAGTGAAACCATTAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp TCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAATGTATTGCTTTTGGAAGATCAACACTGTaGGCACTAGTGACTGCGGAG +
Preference number: 5 (lower is better)
Translates to: SPTGEQPSCECIKECIAFGRSTL*ALVTAE
Trigger: CTCCGCAGTCACTAGTGCCAACAGTGTTGATCTTCC...AAAAGCAATACATTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp CAGGGATTGATTATGTTTTGTATACTGACATCTGCTGGGACCAGTGAGGACACTTCTTCAGTCTGGTGCTaGGGTTTGTCAGGTGGGACT +
Preference number: 5 (lower is better)
Translates to: QGLIMFCILTSAGTSEDTSSVWC*GLSGGT
Trigger: AGTCCCACCTGACAAACCCAAGCACCAGACTGAAGA...AGTGTCCTCACTGGTCCCAGCAGATGTCAGTATACAAAACATAATCAATCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp CATTTTCCCAACCTAGTTTCTAAGATAATACTTCCTGTCTCTCCAAAACGTGACCTGGCTGTGGGTACGTaGCTGGGGGAGTGCTACACT +
Preference number: 5 (lower is better)
Translates to: HFPNLVSKIILPVSPKRDLAVGT*LGECYT
Trigger: AGTGTAGCACTCCCCCAGCAACGTACCCACAGCCAG...GTCACGTTTTGGAGAGACAGGAAGTATTATCTTAGAAACTAGGTTGGGAAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp TTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAATGTCACCTCCAAGCATaGGCATCCCCAATGTATTTA +
Preference number: 5 (lower is better)
Translates to: FQWASPTGEQPSCECIKECHLQA*ASPMYL
Trigger: TAAATACATTGGGGATGCCAATGCTTGGAGGTGACA...TTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp CACATGGTTTCGGCAGCAGGGTCTAGATGTATGTTTATAAATGTACCCAGCTTGCTGCCTTCTTCCGCTTaGGAGGCTTATCCTTGCTCT +
Preference number: 5 (lower is better)
Translates to: HMVSAAGSRCMFINVPSLLPSSA*EAYPCS
Trigger: AGAGCAAGGATAAGCCTCCAAAGCGGAAGAAGGCAG...CAAGCTGGGTACATTTATAAACATACATCTAGACCCTGCTGCCGAAACCATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp CAGATCCCAAACGGAATCATCAGGAATGGCACAGTGCAGGTGGTGAAATCAAAGATACTGCCACTGAGCTaGGAACTTGATGAGCCTTCA +
Preference number: 5 (lower is better)
Translates to: QIPNGIIRNGTVQVVKSKILPLS*ELDEPS
Trigger: TGAAGGCTCATCAAGTTCCAAGCTCAGTGGCAGTAT...CTTTGATTTCACCACCTGCACTGTGCCATTCCTGATGATTCCGTTTGGGATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp TTTCTGGCAAAGAAATATGACTTGTTTCTGAACAACCAACCACATGGTTTCGGCAGCCTCCGGGAGGCCTaGAATGGGAAGGGGATATGT +
Preference number: 5 (lower is better)
Translates to: FLAKKYDLFLNNQPHGFGSLREA*NGKGIC
Trigger: ACATATCCCCTTCCCATTCAAGGCCTCCCGGAGGCT...GCCGAAACCATGTGGTTGGTTGTTCAGAAACAAGTCATATTTCTTTGCCAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp CACCCCTCGGGTTGGTTTACATATATCATTAGTTTCTCCTCTGGACGTGTCTGTGAGAGCCATAGTTCTTaGATGAGGCTATCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: HPSGWFTYIISFSSGRVCESHSS*MRLSVA
Trigger: GGCCACAGATAGCCTCATCAAAGAACTATGGCTCTC...ACAGACACGTCCAGAGGAGAAACTAATGATATATGTAAACCAACCCGAGGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp GGAAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGAGGTGTCCCAGGCTaGGTTTATCCTGCCGCTTCT +
Preference number: 5 (lower is better)
Translates to: GKSNSRVITLKLALAITSGGVPG*VYPAAS
Trigger: AGAAGCGGCAGGATAAACCAAGCCTGGGACACCTCC...TGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092735.12
CDS TCA 90 bp CCTGAAGATGACTTCATACCAGAGCTTGAACTAGTTCCTGACACATaGGAACCACTGGAACCTGAACTGATAGGGGACTTGGCTTTAGAG +
Preference number: 5 (lower is better)
Translates to: PEDDFIPELELVPDT*EPLEPELIGDLALE
Trigger: CTCTAAAGCCAAGTCCCCTATCAGTTCAGGTTCCAGTGGTTCTCATGTGTCAGGAACTAGTTCAAGCTCTGGTATGAAGTCATCTTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS GCA 90 bp CTTCTTCGGCAATATCTGAAAGAATATCAGTTACATCTGGGCCAATaGTGTCTGAACTGGACAGTCGGACCATCCTCTGAATACTGGGCT +
Preference number: 5 (lower is better)
Translates to: LLRQYLKEYQLHLGQ*CLNWTVGPSSEYWA
Trigger: AGCCCAGTATTCAGAGGATGGTCCGACTGTCCAGTTCAGACAGCATTGGCCCAGATGTAACTGATATTCTTTCAGATATTGCCGAAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 90 bp CAGCTGTCAAGGAAGGCTTCTTATTCCTACTGGGAGATTTCCCTTTaGAACTGCCATGTTGATTCTGAGAGGATGACATGGAAGAACCAC +
Preference number: 5 (lower is better)
Translates to: QLSRKASYSYWEISL*NCHVDSERMTWKNH
Trigger: GTGGTTCTTCCATGTCATCCTCTCAGAATCAACATGGCAGTTCCAAAGGGAAATCTCCCAGTAGGAATAAGAAGCCTTCCTTGACAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp TTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCCCCTTGCGGCAAAGATGTTACTTaGAGAGCCTTCTGCAATGTC +
Preference number: 5 (lower is better)
Translates to: FKSYHPQAGFGNYIRSPCGKDVT*RAFCNV
Trigger: GACATTGCAGAAGGCTCTCAAAGTAACATCTTTGCC...GCAAGGGGACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp CCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCTCCAAACGATCAGTCATaGCTGGCAAAGATGTTACTT +
Preference number: 5 (lower is better)
Translates to: PNIAFSVQNCQSPSRAHAPNDQS*LAKMLL
Trigger: AAGTAACATCTTTGCCAGCAATGACTGATCGTTTGG...AGCATGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp TCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAATGTATTGCTTTTGGGGCAATTGGGAGTTaGTACATAGCAGAGGTTCCT +
Preference number: 5 (lower is better)
Translates to: SPTGEQPSCECIKECIAFGAIGS*YIAEVP
Trigger: AGGAACCTCTGCTATGTACAAACTCCCAATTGCCCC...AAAAGCAATACATTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp AATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCCCACTCATTGGGTTGTaGCCTGTGGTCATGCCATAC +
Preference number: 5 (lower is better)
Translates to: NPIQELSPSSWLWQLHQVPLIGL*PVVMPY
Trigger: GTATGGCATGACCACAGGCAACAACCCAATGAGTGG...GACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp AGACACCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCGACTCATGCCGATCTTaGATGCTCATGCTCATATTA +
Preference number: 5 (lower is better)
Translates to: RHQTLLSVSRTVKVLPVPDSCRS*MLMLIL
Trigger: TAATATGAGCATGAGCATCAAAGATCGGCATGAGTC...GGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGGTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp CATTTTCCCAACCTAGTTTCTAAGATAATACTTCCTGTCTCTCCAAAACGTGACGGGTGGTTCTTGGTGTaGCCGGCCATCGAAGAGACA +
Preference number: 5 (lower is better)
Translates to: HFPNLVSKIILPVSPKRDGWFLV*PAIEET
Trigger: TGTCTCTTCGATGGCCGGCAACACCAAGAACCACCC...GTCACGTTTTGGAGAGACAGGAAGTATTATCTTAGAAACTAGGTTGGGAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp ACAAAATGCTGGGATGTAGACTTTTGGCACATTGTGGAAGTAGGAGAACTATTAGAACAGGGGTGCCAATaGGTGGGCAGTCATCACTCG +
Preference number: 5 (lower is better)
Translates to: TKCWDVDFWHIVEVGELLEQGCQ*VGSHHS
Trigger: CGAGTGATGACTGCCCACCAATTGGCACCCCTGTTC...TAATAGTTCTCCTACTTCCACAATGTGCCAAAAGTCTACATCCCAGCATTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp TTGACTTCATGTCCTTGCCGTCTTTCAAACAGGAGGGTGAGCACACCTGGATGGTTCAACAAATCAGGATaGAAATCTACTCCATCAGGG +
Preference number: 5 (lower is better)
Translates to: LTSCPCRLSNRRVSTPGWFNKSG*KSTPSG
Trigger: CCCTGATGGAGTAGATTTCAATCCTGATTTGTTGAA...CCATCCAGGTGTGCTCACCCTCCTGTTTGAAAGACGGCAAGGACATGAAGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp AGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCCCCTTGCTCACCTAAAACCACTTTGGCTTaGGCTGTTCAACAAATCAGG +
Preference number: 5 (lower is better)
Translates to: SYHPQAGFGNYIRSPCSPKTTLA*AVQQIR
Trigger: CCTGATTTGTTGAACAGCCAAAGCCAAAGTGGTTTT...AGGTGAGCAAGGGGACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp TCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAATGTATTGCTTTTGGAGGATGGCTTGCCTaGAGGTTTCATCTTGGTACT +
Preference number: 5 (lower is better)
Translates to: SPTGEQPSCECIKECIAFGGWLA*RFHLGT
Trigger: AGTACCAAGATGAAACCTCAAGGCAAGCCATCCTCC...AAAAGCAATACATTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp CAGGGATTGATTATGTTTTGTATACTGACATCTGCTGGGACCAGTGAGGACACTGGAGGATGGCTTGCCTaGAGGTTTCATCTTGGTACT +
Preference number: 5 (lower is better)
Translates to: QGLIMFCILTSAGTSEDTGGWLA*RFHLGT
Trigger: AGTACCAAGATGAAACCTCAAGGCAAGCCATCCTCC...AGTGTCCTCACTGGTCCCAGCAGATGTCAGTATACAAAACATAATCAATCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS GCA 90 bp TCAAGGAAGGCTTCTTATTCCTACTGGGAGATTTCCCTTTGGAACTaGCATGTTGATTCTGAGAGGATGACATGGAAGAACCACTTGAGG +
Preference number: 5 (lower is better)
Translates to: SRKASYSYWEISLWN*HVDSERMTWKNHLR
Trigger: CCTCAAGTGGTTCTTCCATGTCATCCTCTCAGAATCAACATGGCAGTTCCAAAGGGAAATCTCCCAGTAGGAATAAGAAGCCTTCCTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp ATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCCCCTTGCCTCTTCTCCATTACTaGACGCACAAGCTTAATGGT +
Preference number: 5 (lower is better)
Translates to: IQELSPSSWLWQLHQVPLPLLHY*THKLNG
Trigger: ACCATTAAGCTTGTGCGTCAAGTAATGGAGAAGAGG...CAAGGGGACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp ATAATACTTCCTGTCTCTCCAAAACGTGACTCCGAGACAAATGACAGGAGGACGCCTCTTCTCCATTACTaGACGCACAAGCTTAATGGT +
Preference number: 5 (lower is better)
Translates to: IILPVSPKRDSETNDRRTPLLHY*THKLNG
Trigger: ACCATTAAGCTTGTGCGTCAAGTAATGGAGAAGAGG...CGTCCTCCTGTCATTTGTCTCGGAGTCACGTTTTGGAGAGACAGGAAGTATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp ATAATACTTCCTGTCTCTCCAAAACGTGACTCCGAGACAAATGACAGGAGGACGCAGAGGTTCCTTCAATaGTCACTGAGGCATTCATTC +
Preference number: 5 (lower is better)
Translates to: IILPVSPKRDSETNDRRTQRFLQ*SLRHSF
Trigger: GAATGAATGCCTCAGTGACAATTGAAGGAACCTCTG...CGTCCTCCTGTCATTTGTCTCGGAGTCACGTTTTGGAGAGACAGGAAGTATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp TTTCTGGCAAAGAAATATGACTTGTTTCTGAACAACCAACCACATGGTTTCGGCGGAAGATCAACACTGTaGGCACTAGTGACTGCGGAG +
Preference number: 5 (lower is better)
Translates to: FLAKKYDLFLNNQPHGFGGRSTL*ALVTAE
Trigger: CTCCGCAGTCACTAGTGCCAACAGTGTTGATCTTCC...GCCGAAACCATGTGGTTGGTTGTTCAGAAACAAGTCATATTTCTTTGCCAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp TTCCAATGGGCATCTCCCACAGGTGAGCAACCTTCATGCGAATGCATCAAGGAAGATTCCTGTGCAATTTaGCAGTTTCTGAACAAATGC +
Preference number: 5 (lower is better)
Translates to: FQWASPTGEQPSCECIKEDSCAI*QFLNKC
Trigger: GCATTTGTTCAGAAACTGCAAAATTGCACAGGAATC...TTCCTTGATGCATTCGCATGAAGGTTGCTCACCTGTGGGAGATGCCCATTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp AAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGGTACCACTCATTGGGTaGTTGCCTGTGGTCATGCCA +
Preference number: 5 (lower is better)
Translates to: KIQFKSYHPQAGFGNYIRVPLIG*LPVVMP
Trigger: TGGCATGACCACAGGCAACAACCCAATGAGTGGTAC...CCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp AAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTTCTTCTTGGCCTTGTaGCTCCCCGAGCACATTTCC +
Preference number: 5 (lower is better)
Translates to: KIQFKSYHPQAGFGNYIRFFLAL*LPEHIS
Trigger: GGAAATGTGCTCGGGGAGCAACAAGGCCAAGAAGAA...CCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp ACAACCAACCACATGGTTTCGGCAGCAGGGTCTAGATGTATGTTTATAAATGTAGAGAATGCCCAGAACTaGAGGAATCTCGAACAGGGG +
Preference number: 5 (lower is better)
Translates to: TTNHMVSAAGSRCMFINVENAQN*RNLEQG
Trigger: CCCCTGTTCGAGATTCCTCAAGTTCTGGGCATTCTC...TACATTTATAAACATACATCTAGACCCTGCTGCCGAAACCATGTGGTTGGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp CACCACCCCTCTCCCCTTAAGCAAGTAATTTATTCATTGCTTTCTGGCAAAGAAAATTTTGGCTCCCCATaGTCACCTCCAAGCATTGGC +
Preference number: 5 (lower is better)
Translates to: HHPSPLKQVIYSLLSGKENFGSP*SPPSIG
Trigger: GCCAATGCTTGGAGGTGACAATGGGGAGCCAAAATT...TTCTTTGCCAGAAAGCAATGAATAAATTACTTGCTTAAGGGGAGAGGGGTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp CACATGGTTTCGGCAGCAGGGTCTAGATGTATGTTTATAAATGTACCCAGCTTGATACTGCCACTGAGCTaGGAACTTGATGAGCCTTCA +
Preference number: 5 (lower is better)
Translates to: HMVSAAGSRCMFINVPSLILPLS*ELDEPS
Trigger: TGAAGGCTCATCAAGTTCCAAGCTCAGTGGCAGTAT...CAAGCTGGGTACATTTATAAACATACATCTAGACCCTGCTGCCGAAACCATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS GCA 90 bp GTCACTGAGGCATTCATTCCCAAAGACCGAGGAACATTCTTTTCATaGAAAATGATAGGAGAGGCAGTCTTATCATCCAGCAGGTCAGAT +
Preference number: 5 (lower is better)
Translates to: VTEAFIPKDRGTFFS*KMIGEAVLSSSRSD
Trigger: ATCTGACCTGCTGGATGATAAGACTGCCTCTCCTATCATTTTGCATGAAAAGAATGTTCCTCGGTCTTTGGGAATGAATGCCTCAGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000018304.7
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS CCA 90 bp GAGATTTCCCTTTGGAACTGCCATGTTGATTCTGAGAGGATGACATaGAAGAACCACTTGAGGAAAACGAAGAGGAAGATGGTGTACAAG +
Preference number: 5 (lower is better)
Translates to: EISLWNCHVDSERMT*KNHLRKTKRKMVYK
Trigger: CTTGTACACCATCTTCCTCTTCGTTTTCCTCAAGTGGTTCTTCCATGTCATCCTCTCAGAATCAACATGGCAGTTCCAAAGGGAAATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp CCAAACATTGCTTTCAGTGTCCAGAACTGTCAAAGTCCTTCCCGTGCCCATGCTAGACCCTTAAGATGCTaGGAAAATTCCTCAAAATTC +
Preference number: 5 (lower is better)
Translates to: PNIAFSVQNCQSPSRAHARPLRC*ENSSKF
Trigger: GAATTTTGAGGAATTTTCCAAGCATCTTAAGGGTCT...AGCATGGGCACGGGAAGGACTTTGACAGTTCTGGACACTGAAAGCAATGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp AGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCCCCTTGCTCACCTAGACCCTTAAGATGCTaGGAAAATTCCTCAAAATTC +
Preference number: 5 (lower is better)
Translates to: SYHPQAGFGNYIRSPCSPRPLRC*ENSSKF
Trigger: GAATTTTGAGGAATTTTCCAAGCATCTTAAGGGTCT...AGGTGAGCAAGGGGACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp ATTGCCCAGGGATTGATTATGTTTTGTATACTGACATCTGCTGGGACCAGTGAGCAGAGGTTCCTTCAATaGTCACTGAGGCATTCATTC +
Preference number: 5 (lower is better)
Translates to: IAQGLIMFCILTSAGTSEQRFLQ*SLRHSF
Trigger: GAATGAATGCCTCAGTGACAATTGAAGGAACCTCTG...CTCACTGGTCCCAGCAGATGTCAGTATACAAAACATAATCAATCCCTGGGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp GGAAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGGGCAATTGGGAGTTaGTACATAGCAGAGGTTCCT +
Preference number: 5 (lower is better)
Translates to: GKSNSRVITLKLALAITSGAIGS*YIAEVP
Trigger: AGGAACCTCTGCTATGTACAAACTCCCAATTGCCCC...TGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp CACATGGTTTCGGCAGCAGGGTCTAGATGTATGTTTATAAATGTACCCAGCTTGTACAGCTCACATGTGTaGAGTCTTGCACATCCATCA +
Preference number: 5 (lower is better)
Translates to: HMVSAAGSRCMFINVPSLYSSHV*SLAHPS
Trigger: TGATGGATGTGCAAGACTCAACACATGTGAGCTGTA...CAAGCTGGGTACATTTATAAACATACATCTAGACCCTGCTGCCGAAACCATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp TTTCTGGCAAAGAAATATGACTTGTTTCTGAACAACCAACCACATGGTTTCGGCCAGGAACAGGCTTCATaGGAGAGGCAAGCTTATCTG +
Preference number: 5 (lower is better)
Translates to: FLAKKYDLFLNNQPHGFGQEQAS*ERQAYL
Trigger: CAGATAAGCTTGCCTCTCCAATGAAGCCTGTTCCTG...GCCGAAACCATGTGGTTGGTTGTTCAGAAACAAGTCATATTTCTTTGCCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp CACATGGTTTCGGCAGCAGGGTCTAGATGTATGTTTATAAATGTACCCAGCTTGACATGGAAGAACCACTaGAGGAAAACGAAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: HMVSAAGSRCMFINVPSLTWKNH*RKTKRK
Trigger: CTTCCTCTTCGTTTTCCTCAAGTGGTTCTTCCATGT...CAAGCTGGGTACATTTATAAACATACATCTAGACCCTGCTGCCGAAACCATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS TCA 90 bp GGCAATTGGGAGTTTGTACATAGCAGAGGTTCCTTCAATTGTCACTaGGGCATTCATTCCCAAAGACCGAGGAACATTCTTTTCATGCAA +
Preference number: 5 (lower is better)
Translates to: GNWEFVHSRGSFNCH*GIHSQRPRNILFMQ
Trigger: TTGCATGAAAAGAATGTTCCTCGGTCTTTGGGAATGAATGCCTCAGTGACAATTGAAGGAACCTCTGCTATGTACAAACTCCCAATTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018304.7
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp TTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTCCCCTTGCAGACCCTTAAGATGCTaGGAAAATTCCTCAAAATTC +
Preference number: 5 (lower is better)
Translates to: FKSYHPQAGFGNYIRSPCRPLRC*ENSSKF
Trigger: GAATTTTGAGGAATTTTCCAAGCATCTTAAGGGTCT...GCAAGGGGACCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp ATTCCTATGGTGTCTGAACCCTGTGAAAAACCTCCAAAGATAATAGTTTTGGTTGTACCACTCATTGGGTaGTTGCCTGTGGTCATGCCA +
Preference number: 5 (lower is better)
Translates to: IPMVSEPCEKPPKIIVLVVPLIG*LPVVMP
Trigger: TGGCATGACCACAGGCAACAACCCAATGAGTGGTAC...AACCAAAACTATTATCTTTGGAGGTTTTTCACAGGGTTCAGACACCATAGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp ATTCCTATGGTGTCTGAACCCTGTGAAAAACCTCCAAAGATAATAGTTTTGGTTTCTTCAGTCTGGTGCTaGGGTTTGTCAGGTGGGACT +
Preference number: 5 (lower is better)
Translates to: IPMVSEPCEKPPKIIVLVSSVWC*GLSGGT
Trigger: AGTCCCACCTGACAAACCCAAGCACCAGACTGAAGA...AACCAAAACTATTATCTTTGGAGGTTTTTCACAGGGTTCAGACACCATAGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp AAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGTTTGGAGGCTTATCCTaGCTCTTCCCATCATTGGAG +
Preference number: 5 (lower is better)
Translates to: KIQFKSYHPQAGFGNYIRFGGLS*LFPSLE
Trigger: CTCCAATGATGGGAAGAGCAAGGATAAGCCTCCAAA...CCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp ACAACCAACCACATGGTTTCGGCAGCAGGGTCTAGATGTATGTTTATAAATGTACCTGACGTGTTATGTTaGGAGGACATGGGATGGTTA +
Preference number: 5 (lower is better)
Translates to: TTNHMVSAAGSRCMFINVPDVLC*EDMGWL
Trigger: TAACCATCCCATGTCCTCCAAACATAACACGTCAGG...TACATTTATAAACATACATCTAGACCCTGCTGCCGAAACCATGTGGTTGGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp CATTTTCCCAACCTAGTTTCTAAGATAATACTTCCTGTCTCTCCAAAACGTGACTCACTTTTCTCACGTTaGCTCTGGAACTCCCCTCCT +
Preference number: 5 (lower is better)
Translates to: HFPNLVSKIILPVSPKRDSLFSR*LWNSPP
Trigger: AGGAGGGGAGTTCCAGAGCAAACGTGAGAAAAGTGA...GTCACGTTTTGGAGAGACAGGAAGTATTATCTTAGAAACTAGGTTGGGAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp AGGAAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCGCAAATAGGTACACGTaGACTTCATGTCCTTGCCGT +
Preference number: 5 (lower is better)
Translates to: RKIQFKSYHPQAGFGNYIANRYT*TSCPCR
Trigger: ACGGCAAGGACATGAAGTCAACGTGTACCTATTTGC...GATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092735.12
CDS-3UTR CAA 90 bp AGGAAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCTACAGCTCACATGTGTaGAGTCTTGCACATCCATCA +
Preference number: 5 (lower is better)
Translates to: RKIQFKSYHPQAGFGNYIYSSHV*SLAHPS
Trigger: TGATGGATGTGCAAGACTCAACACATGTGAGCTGTA...GATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp GGAAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCATACAGCTCACATGTGTaGAGTCTTGCACATCCATCA +
Preference number: 5 (lower is better)
Translates to: GKSNSRVITLKLALAITSYSSHV*SLAHPS
Trigger: TGATGGATGTGCAAGACTCAACACATGTGAGCTGTA...TGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp AGGAAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCACATGGAAGAACCACTaGAGGAAAACGAAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: RKIQFKSYHPQAGFGNYITWKNH*RKTKRK
Trigger: CTTCCTCTTCGTTTTCCTCAAGTGGTTCTTCCATGT...GATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107545.9
CDS GCA 90 bp TTCTTGTCTCTGTCTTTGTCTCTGACTTTCTTCTTTTCCTTTTTGTaGTTCTTATGCTTCTCAGTGCTGTACTCTGGAAGTGGTCGGATA +
Preference number: 5 (lower is better)
Translates to: FLSLSLSLTFFFSFL*FLCFSVLYSGSGRI
Trigger: TATCCGACCACTTCCAGAGTACAGCACTGAGAAGCATAAGAAGCACAAAAAGGAAAAGAAGAAAGTCAGAGACAAAGACAGAGACAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp GGAAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCACCAAACGATCAGTCATaGCTGGCAAAGATGTTACTT +
Preference number: 5 (lower is better)
Translates to: GKSNSRVITLKLALAITSPNDQS*LAKMLL
Trigger: AAGTAACATCTTTGCCAGCAATGACTGATCGTTTGG...TGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp TTTCTGGCAAAGAAATATGACTTGTTTCTGAACAACCAACCACATGGTTTCGGCCCAGAAGCAGAGACCTaGGATTTGTCTTTATCACTT +
Preference number: 5 (lower is better)
Translates to: FLAKKYDLFLNNQPHGFGPEAET*DLSLSL
Trigger: AAGTGATAAAGACAAATCCAAGGTCTCTGCTTCTGG...GCCGAAACCATGTGGTTGGTTGTTCAGAAACAAGTCATATTTCTTTGCCAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp ACAACCAACCACATGGTTTCGGCAGCAGGGTCTAGATGTATGTTTATAAATGTACCAGAAGCAGAGACCTaGGATTTGTCTTTATCACTT +
Preference number: 5 (lower is better)
Translates to: TTNHMVSAAGSRCMFINVPEAET*DLSLSL
Trigger: AAGTGATAAAGACAAATCCAAGGTCTCTGCTTCTGG...TACATTTATAAACATACATCTAGACCCTGCTGCCGAAACCATGTGGTTGGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp ACAAAATGCTGGGATGTAGACTTTTGGCACATTGTGGAAGTAGGAGAACTATTACCAAACGATCAGTCATaGCTGGCAAAGATGTTACTT +
Preference number: 5 (lower is better)
Translates to: TKCWDVDFWHIVEVGELLPNDQS*LAKMLL
Trigger: AAGTAACATCTTTGCCAGCAATGACTGATCGTTTGG...TAATAGTTCTCCTACTTCCACAATGTGCCAAAAGTCTACATCCCAGCATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp AAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGGGATTCCTGTGCAATTTaGCAGTTTCTGAACAAATGC +
Preference number: 5 (lower is better)
Translates to: KIQFKSYHPQAGFGNYIRDSCAI*QFLNKC
Trigger: GCATTTGTTCAGAAACTGCAAAATTGCACAGGAATC...CCTGATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp TTTCTGGCAAAGAAATATGACTTGTTTCTGAACAACCAACCACATGGTTTCGGCAGTGTTATAGGCCACTaGGTGTCTGATCATATTCAA +
Preference number: 5 (lower is better)
Translates to: FLAKKYDLFLNNQPHGFGSVIGH*VSDHIQ
Trigger: TTGAATATGATCAGACACCAAGTGGCCTATAACACT...GCCGAAACCATGTGGTTGGTTGTTCAGAAACAAGTCATATTTCTTTGCCAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp AGGAAAATCCAATTCAAGAGTTATCACCCTCAAGCTGGCTTTGGCAATTACATCAGTGTTATAGGCCACTaGGTGTCTGATCATATTCAA +
Preference number: 5 (lower is better)
Translates to: RKIQFKSYHPQAGFGNYISVIGH*VSDHIQ
Trigger: TTGAATATGATCAGACACCAAGTGGCCTATAACACT...GATGTAATTGCCAAAGCCAGCTTGAGGGTGATAACTCTTGAATTGGATTTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp ACAAAATGCTGGGATGTAGACTTTTGGCACATTGTGGAAGTAGGAGAACTATTAGACTCATGCCGATCTTaGATGCTCATGCTCATATTA +
Preference number: 5 (lower is better)
Translates to: TKCWDVDFWHIVEVGELLDSCRS*MLMLIL
Trigger: TAATATGAGCATGAGCATCAAAGATCGGCATGAGTC...TAATAGTTCTCCTACTTCCACAATGTGCCAAAAGTCTACATCCCAGCATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp TTTCTGGCAAAGAAATATGACTTGTTTCTGAACAACCAACCACATGGTTTCGGCTTCAACAAATCAGGATaGAAATCTACTCCATCAGGG +
Preference number: 5 (lower is better)
Translates to: FLAKKYDLFLNNQPHGFGFNKSG*KSTPSG
Trigger: CCCTGATGGAGTAGATTTCAATCCTGATTTGTTGAA...GCCGAAACCATGTGGTTGGTTGTTCAGAAACAAGTCATATTTCTTTGCCAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp ACAAAATGCTGGGATGTAGACTTTTGGCACATTGTGGAAGTAGGAGAACTATTAAAAACCACTTTGGCTTaGGCTGTTCAACAAATCAGG +
Preference number: 5 (lower is better)
Translates to: TKCWDVDFWHIVEVGELLKTTLA*AVQQIR
Trigger: CCTGATTTGTTGAACAGCCAAAGCCAAAGTGGTTTT...TAATAGTTCTCCTACTTCCACAATGTGCCAAAAGTCTACATCCCAGCATTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS-3UTR CAA 90 bp ACAAAATGCTGGGATGTAGACTTTTGGCACATTGTGGAAGTAGGAGAACTATTAGATTCCTGTGCAATTTaGCAGTTTCTGAACAAATGC +
Preference number: 5 (lower is better)
Translates to: TKCWDVDFWHIVEVGELLDSCAI*QFLNKC
Trigger: GCATTTGTTCAGAAACTGCAAAATTGCACAGGAATC...TAATAGTTCTCCTACTTCCACAATGTGCCAAAAGTCTACATCCCAGCATTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 72 bp GTGGTTCTTGGTGTTGCCGGCCATCGAAGAGACAGGTaGCGGCGTGTGATGAGGAGGGGTCGGACTCGAGCC +
Preference number: 6 (lower is better)
Translates to: VVLGVAGHRRDR*RRVMRRGRTRA
Trigger: GGCTCGAGTCCGACCCCTCCTCATCACACGCCGCCACCTGTCTCTTCGATGGCCGGCAACACCAAGAACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CAA 90 bp TTGCTCTTCCCATCATTGGAGGGAGTGCGGCTGCGCTTGCCTGGCTaGCTGTCTGACCCTGGACCTGATCCACTGCTAGCACCTGTGCCG +
Preference number: 6 (lower is better)
Translates to: LLFPSLEGVRLRLPG*LSDPGPDPLLAPVP
Trigger: CGGCACAGGTGCTAGCAGTGGATCAGGTCCAGGGTCAGACAGCAAGCCAGGCAAGCGCAGCCGCACTCCCTCCAATGATGGGAAGAGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS TCA 72 bp GGGGGAGTGCTACACTGGCTTGGAGCTGGGGTGATATaGGGTGTATCCAGCGCGTCAGCGGTCATGCTGACG +
Preference number: 6 (lower is better)
Translates to: GGVLHWLGAGVI*GVSSASAVMLT
Trigger: CGTCAGCATGACCGCTGACGCGCTGGATACACCTCATATCACCCCAGCTCCAAGCCAGTGTAGCACTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS GCA 72 bp TGCTCTTCCCATCATTGGAGGGAGTGCGGCTGCGCTTaGCTGGCTTGCTGTCTGACCCTGGACCTGATCCAC +
Preference number: 6 (lower is better)
Translates to: CSSHHWRECGCA*LACCLTLDLIH
Trigger: GTGGATCAGGTCCAGGGTCAGACAGCAAGCCAGGCAAGCGCAGCCGCACTCCCTCCAATGATGGGAAGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CAA 72 bp CCATCATTGGAGGGAGTGCGGCTGCGCTTGCCTGGCTaGCTGTCTGACCCTGGACCTGATCCACTGCTAGCA +
Preference number: 6 (lower is better)
Translates to: PSLEGVRLRLPG*LSDPGPDPLLA
Trigger: TGCTAGCAGTGGATCAGGTCCAGGGTCAGACAGCAAGCCAGGCAAGCGCAGCCGCACTCCCTCCAATGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CAA 90 bp CCCGGAAAGGTGTTGGTTGGTGTAGTGGTACCACTCATTGGGTTGTaGCCTGTGGTCATGCCATACCCTGGGCTGCTAGCCGGGGGCAGG +
Preference number: 6 (lower is better)
Translates to: PGKVLVGVVVPLIGL*PVVMPYPGLLAGGR
Trigger: CCTGCCCCCGGCTAGCAGCCCAGGGTATGGCATGACCACAGGCAACAACCCAATGAGTGGTACCACTACACCAACCAACACCTTTCCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS GCA 72 bp TATCCTTGCTCTTCCCATCATTGGAGGGAGTGCGGCTaGGCTTGCCTGGCTTGCTGTCTGACCCTGGACCTG +
Preference number: 6 (lower is better)
Translates to: YPCSSHHWRECG*ACLACCLTLDL
Trigger: CAGGTCCAGGGTCAGACAGCAAGCCAGGCAAGCGCAGCCGCACTCCCTCCAATGATGGGAAGAGCAAGGATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 72 bp GTACGTTGCTGGGGGAGTGCTACACTGGCTTGGAGCTaGGGTGATATGAGGTGTATCCAGCGCGTCAGCGGT +
Preference number: 6 (lower is better)
Translates to: VRCWGSATLAWS*GDMRCIQRVSG
Trigger: ACCGCTGACGCGCTGGATACACCTCATATCACCCCAGCTCCAAGCCAGTGTAGCACTCCCCCAGCAACGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 72 bp CTGTGGGTACGTTGCTGGGGGAGTGCTACACTGGCTTaGAGCTGGGGTGATATGAGGTGTATCCAGCGCGTC +
Preference number: 6 (lower is better)
Translates to: LWVRCWGSATLA*SWGDMRCIQRV
Trigger: GACGCGCTGGATACACCTCATATCACCCCAGCTCCAAGCCAGTGTAGCACTCCCCCAGCAACGTACCCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CAA 90 bp GACTTCCCCTCAGTGTCTGCCTTCTTCCGCTTTGGAGGCTTATCCTaGCTCTTCCCATCATTGGAGGGAGTGCGGCTGCGCTTGCCTGGC +
Preference number: 6 (lower is better)
Translates to: DFPSVSAFFRFGGLS*LFPSLEGVRLRLPG
Trigger: GCCAGGCAAGCGCAGCCGCACTCCCTCCAATGATGGGAAGAGCAAGGATAAGCCTCCAAAGCGGAAGAAGGCAGACACTGAGGGGAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CAA 90 bp TCTGCCTTCTTCCGCTTTGGAGGCTTATCCTTGCTCTTCCCATCATaGGAGGGAGTGCGGCTGCGCTTGCCTGGCTTGCTGTCTGACCCT +
Preference number: 6 (lower is better)
Translates to: SAFFRFGGLSLLFPS*EGVRLRLPGLLSDP
Trigger: AGGGTCAGACAGCAAGCCAGGCAAGCGCAGCCGCACTCCCTCCAATGATGGGAAGAGCAAGGATAAGCCTCCAAAGCGGAAGAAGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 72 bp TCCGCTTTGGAGGCTTATCCTTGCTCTTCCCATCATTaGAGGGAGTGCGGCTGCGCTTGCCTGGCTTGCTGT +
Preference number: 6 (lower is better)
Translates to: SALEAYPCSSHH*RECGCACLACC
Trigger: ACAGCAAGCCAGGCAAGCGCAGCCGCACTCCCTCCAATGATGGGAAGAGCAAGGATAAGCCTCCAAAGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS GCA 72 bp GCTGGCGACTTACTGTGGCTGGGAGAACCCCGTTCGTaGTTTGGAGTGGAACCACTGATAAGTGGAGAGCCA +
Preference number: 6 (lower is better)
Translates to: AGDLLWLGEPRS*FGVEPLISGEP
Trigger: TGGCTCTCCACTTATCAGTGGTTCCACTCCAAAGCACGAACGGGGTTCTCCCAGCCACAGTAAGTCGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 72 bp TGTCTGAACTGGACAGTCGGACCATCCTCTGAATACTaGGCTGGGGGTGAGACACTGGCTGTGGGTACGTTG +
Preference number: 6 (lower is better)
Translates to: CLNWTVGPSSEY*AGGETLAVGTL
Trigger: CAACGTACCCACAGCCAGTGTCTCACCCCCAGCCCAGTATTCAGAGGATGGTCCGACTGTCCAGTTCAGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CAA 72 bp GGTGGGACTCTTGACGACTTCTTCTTCTTGGCCTTGTaGCTCCCCGAGCACATTTCCATCCGGGGTGATCCG +
Preference number: 6 (lower is better)
Translates to: GGTLDDFFFLAL*LPEHISIRGDP
Trigger: CGGATCACCCCGGATGGAAATGTGCTCGGGGAGCAACAAGGCCAAGAAGAAGAAGTCGTCAAGAGTCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CAA 72 bp TCAGTGTCTGCCTTCTTCCGCTTTGGAGGCTTATCCTaGCTCTTCCCATCATTGGAGGGAGTGCGGCTGCGC +
Preference number: 6 (lower is better)
Translates to: SVSAFFRFGGLS*LFPSLEGVRLR
Trigger: GCGCAGCCGCACTCCCTCCAATGATGGGAAGAGCAAGGATAAGCCTCCAAAGCGGAAGAAGGCAGACACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CAA 90 bp GGTTTGTCAGGTGGGACTCTTGACGACTTCTTCTTCTTGGCCTTGTaGCTCCCCGAGCACATTTCCATCCGGGGTGATCCGGAAGAGGAG +
Preference number: 6 (lower is better)
Translates to: GLSGGTLDDFFFLAL*LPEHISIRGDPEEE
Trigger: CTCCTCTTCCGGATCACCCCGGATGGAAATGTGCTCGGGGAGCAACAAGGCCAAGAAGAAGAAGTCGTCAAGAGTCCCACCTGACAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CAA 90 bp TGGTGCTTGGGTTTGTCAGGTGGGACTCTTGACGACTTCTTCTTCTaGGCCTTGTTGCTCCCCGAGCACATTTCCATCCGGGGTGATCCG +
Preference number: 6 (lower is better)
Translates to: WCLGLSGGTLDDFFF*ALLLPEHISIRGDP
Trigger: CGGATCACCCCGGATGGAAATGTGCTCGGGGAGCAACAAGGCCAAGAAGAAGAAGTCGTCAAGAGTCCCACCTGACAAACCCAAGCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CAA 90 bp AACTGTGAGATGGGGACTTCCCCTCAGTGTCTGCCTTCTTCCGCTTaGGAGGCTTATCCTTGCTCTTCCCATCATTGGAGGGAGTGCGGC +
Preference number: 6 (lower is better)
Translates to: NCEMGTSPQCLPSSA*EAYPCSSHHWRECG
Trigger: GCCGCACTCCCTCCAATGATGGGAAGAGCAAGGATAAGCCTCCAAAGCGGAAGAAGGCAGACACTGAGGGGAAGTCCCCATCTCACAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 72 bp ACTCATTGGGTTGTTGCCTGTGGTCATGCCATACCCTaGGCTGCTAGCCGGGGGCAGGTTCTTTTTCACCAT +
Preference number: 6 (lower is better)
Translates to: THWVVACGHAIP*AASRGQVLFHH
Trigger: ATGGTGAAAAAGAACCTGCCCCCGGCTAGCAGCCCAGGGTATGGCATGACCACAGGCAACAACCCAATGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 72 bp TGGGGACTTCCCCTCAGTGTCTGCCTTCTTCCGCTTTaGAGGCTTATCCTTGCTCTTCCCATCATTGGAGGG +
Preference number: 6 (lower is better)
Translates to: WGLPLSVCLLPL*RLILALPIIGG
Trigger: CCCTCCAATGATGGGAAGAGCAAGGATAAGCCTCCAAAGCGGAAGAAGGCAGACACTGAGGGGAAGTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CAA 72 bp GTGTTGGTTGGTGTAGTGGTACCACTCATTGGGTTGTaGCCTGTGGTCATGCCATACCCTGGGCTGCTAGCC +
Preference number: 6 (lower is better)
Translates to: VLVGVVVPLIGL*PVVMPYPGLLA
Trigger: GGCTAGCAGCCCAGGGTATGGCATGACCACAGGCAACAACCCAATGAGTGGTACCACTACACCAACCAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CAA 72 bp GCCCAGAACTTGAGGAATCTCGAACAGGGGTGCCAATaGGTGGGCAGTCATCACTCGTGCTGGGAAGCTTTG +
Preference number: 6 (lower is better)
Translates to: AQNLRNLEQGCQ*VGSHHSCWEAL
Trigger: CAAAGCTTCCCAGCACGAGTGATGACTGCCCACCAATTGGCACCCCTGTTCGAGATTCCTCAAGTTCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CAA 72 bp TCTCCACCACTTTCTCCAGGTTTCTGTAGCGTCACTTaGGCTTTGATGCTCGGGGAGCCTCCGTCGTGCTTG +
Preference number: 6 (lower is better)
Translates to: SPPLSPGFCSVT*ALMLGEPPSCL
Trigger: CAAGCACGACGGAGGCTCCCCGAGCATCAAAGCCAAAGTGACGCTACAGAAACCTGGAGAAAGTGGTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CAA 90 bp TTGGGTTTGTCAGGTGGGACTCTTGACGACTTCTTCTTCTTGGCCTaGTTGCTCCCCGAGCACATTTCCATCCGGGGTGATCCGGAAGAG +
Preference number: 6 (lower is better)
Translates to: LGLSGGTLDDFFFLA*LLPEHISIRGDPEE
Trigger: CTCTTCCGGATCACCCCGGATGGAAATGTGCTCGGGGAGCAACAAGGCCAAGAAGAAGAAGTCGTCAAGAGTCCCACCTGACAAACCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CAA 90 bp CTGAGCCCATCTCCACCACTTTCTCCAGGTTTCTGTAGCGTCACTTaGGCTTTGATGCTCGGGGAGCCTCCGTCGTGCTTGCTGATAATG +
Preference number: 6 (lower is better)
Translates to: LSPSPPLSPGFCSVT*ALMLGEPPSCLLIM
Trigger: CATTATCAGCAAGCACGACGGAGGCTCCCCGAGCATCAAAGCCAAAGTGACGCTACAGAAACCTGGAGAAAGTGGTGGAGATGGGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS GCA 72 bp GAGAATGCCCAGAACTTGAGGAATCTCGAACAGGGGTaGCAATTGGTGGGCAGTCATCACTCGTGCTGGGAA +
Preference number: 6 (lower is better)
Translates to: ENAQNLRNLEQG*QLVGSHHSCWE
Trigger: TTCCCAGCACGAGTGATGACTGCCCACCAATTGGCACCCCTGTTCGAGATTCCTCAAGTTCTGGGCATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 72 bp CGGAAAGGTGTTGGTTGGTGTAGTGGTACCACTCATTaGGTTGTTGCCTGTGGTCATGCCATACCCTGGGCT +
Preference number: 6 (lower is better)
Translates to: RKGVGWCSGTTH*VVACGHAIPWA
Trigger: AGCCCAGGGTATGGCATGACCACAGGCAACAACCCAATGAGTGGTACCACTACACCAACCAACACCTTTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 72 bp GTTTGTCAGGTGGGACTCTTGACGACTTCTTCTTCTTaGCCTTGTTGCTCCCCGAGCACATTTCCATCCGGG +
Preference number: 6 (lower is better)
Translates to: VCQVGLLTTSSS*PCCSPSTFPSG
Trigger: CCCGGATGGAAATGTGCTCGGGGAGCAACAAGGCCAAGAAGAAGAAGTCGTCAAGAGTCCCACCTGACAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 72 bp ACTGCCTGGGGATTTGGACCCACCCGTGCTGGTAGGTaGGGTGAAAGGTCTATTAGAAGAACTGTGAGATGG +
Preference number: 6 (lower is better)
Translates to: TAWGFGPTRAGR*GERSIRRTVRW
Trigger: CCATCTCACAGTTCTTCTAATAGACCTTTCACCCCACCTACCAGCACGGGTGGGTCCAAATCCCCAGGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 72 bp CATTCTGTGGTGTATATGCTGGCGACTTACTGTGGCTaGGAGAACCCCGTTCGTGCTTTGGAGTGGAACCAC +
Preference number: 6 (lower is better)
Translates to: HSVVYMLATYCG*ENPVRALEWNH
Trigger: GTGGTTCCACTCCAAAGCACGAACGGGGTTCTCCCAGCCACAGTAAGTCGCCAGCATATACACCACAGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CAA 72 bp TCAGGTGGGACTCTTGACGACTTCTTCTTCTTGGCCTaGTTGCTCCCCGAGCACATTTCCATCCGGGGTGAT +
Preference number: 6 (lower is better)
Translates to: SGGTLDDFFFLA*LLPEHISIRGD
Trigger: ATCACCCCGGATGGAAATGTGCTCGGGGAGCAACAAGGCCAAGAAGAAGAAGTCGTCAAGAGTCCCACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CAA 72 bp CTTCAGTCTGGTGCTTGGGTTTGTCAGGTGGGACTCTaGACGACTTCTTCTTCTTGGCCTTGTTGCTCCCCG +
Preference number: 6 (lower is better)
Translates to: LQSGAWVCQVGL*TTSSSWPCCSP
Trigger: CGGGGAGCAACAAGGCCAAGAAGAAGAAGTCGTCAAGAGTCCCACCTGACAAACCCAAGCACCAGACTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CAA 72 bp CCACTTTCTCCAGGTTTCTGTAGCGTCACTTTGGCTTaGATGCTCGGGGAGCCTCCGTCGTGCTTGCTGATA +
Preference number: 6 (lower is better)
Translates to: PLSPGFCSVTLA*MLGEPPSCLLI
Trigger: TATCAGCAAGCACGACGGAGGCTCCCCGAGCATCAAAGCCAAAGTGACGCTACAGAAACCTGGAGAAAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS TCA 72 bp ACAAGCTCTGGACAGCTCACAGGATTCTCCCCATGGTaGGCCACTTTGACATCACAAAGCTGTCCTGCAGGA +
Preference number: 6 (lower is better)
Translates to: TSSGQLTGFSPW*ATLTSQSCPAG
Trigger: TCCTGCAGGACAGCTTTGTGATGTCAAAGTGGCTCACCATGGGGAGAATCCTGTGAGCTGTCCAGAGCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018304.7
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS TCA 72 bp ATGGGATGGTTAGAAGAATTTGTGCTTGCGCCCATCTaGCTGTCTATTGGATCCTCACCCCCAGGCCCACTG +
Preference number: 6 (lower is better)
Translates to: MGWLEEFVLAPI*LSIGSSPPGPL
Trigger: CAGTGGGCCTGGGGGTGAGGATCCAATAGACAGTCAGATGGGCGCAAGCACAAATTCTTCTAACCATCCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS GCA 72 bp GAACAGGGGTGCCAATTGGTGGGCAGTCATCACTCGTaGTGGGAAGCTTTGAAGCTTCTTCGGCAATATCTG +
Preference number: 6 (lower is better)
Translates to: EQGCQLVGSHHS*WEALKLLRQYL
Trigger: CAGATATTGCCGAAGAAGCTTCAAAGCTTCCCAGCACGAGTGATGACTGCCCACCAATTGGCACCCCTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 72 bp CGACTTACTGTGGCTGGGAGAACCCCGTTCGTGCTTTaGAGTGGAACCACTGATAAGTGGAGAGCCATAGTT +
Preference number: 6 (lower is better)
Translates to: RLTVAGRTPFVL*SGTTDKWRAIV
Trigger: AACTATGGCTCTCCACTTATCAGTGGTTCCACTCCAAAGCACGAACGGGGTTCTCCCAGCCACAGTAAGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 72 bp CTCACTTTCACTGTCCACATTCTGTGGTGTATATGCTaGCGACTTACTGTGGCTGGGAGAACCCCGTTCGTG +
Preference number: 6 (lower is better)
Translates to: LTFTVHILWCIC*RLTVAGRTPFV
Trigger: CACGAACGGGGTTCTCCCAGCCACAGTAAGTCGCCAGCATATACACCACAGAATGTGGACAGTGAAAGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 72 bp TGTACTCTGGAAGTGGTCGGATACCATCCTCTGAGCTaGGACTGTTCTGGTAGGATCTCTCTGCTATGGAGG +
Preference number: 6 (lower is better)
Translates to: CTLEVVGYHPLS*DCSGRISLLWR
Trigger: CCTCCATAGCAGAGAGATCCTACCAGAACAGTCCCAGCTCAGAGGATGGTATCCGACCACTTCCAGAGTACA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CAA 72 bp AAGGTGTTGGTTGGTGTAGTGGTACCACTCATTGGGTaGTTGCCTGTGGTCATGCCATACCCTGGGCTGCTA +
Preference number: 6 (lower is better)
Translates to: KVLVGVVVPLIG*LPVVMPYPGLL
Trigger: TAGCAGCCCAGGGTATGGCATGACCACAGGCAACAACCCAATGAGTGGTACCACTACACCAACCAACACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CAA 72 bp TTATCTTTAAGAAGGTTCATGAGCATCGGGTGGTTCTaGGTGTTGCCGGCCATCGAAGAGACAGGTGGCGGC +
Preference number: 6 (lower is better)
Translates to: LSLRRFMSIGWF*VLPAIEETGGG
Trigger: GCCGCCACCTGTCTCTTCGATGGCCGGCAACACCAAGAACCACCCGATGCTCATGAACCTTCTTAAAGATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CAA 72 bp CAGAATCAAAGAGGGCACTCTGAGAATGCCCAGAACTaGAGGAATCTCGAACAGGGGTGCCAATTGGTGGGC +
Preference number: 6 (lower is better)
Translates to: QNQRGHSENAQN*RNLEQGCQLVG
Trigger: GCCCACCAATTGGCACCCCTGTTCGAGATTCCTCAAGTTCTGGGCATTCTCAGAGTGCCCTCTTTGATTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CAA 90 bp GGAAATCGTCTTCAGTCTGGTGCTTGGGTTTGTCAGGTGGGACTCTaGACGACTTCTTCTTCTTGGCCTTGTTGCTCCCCGAGCACATTT +
Preference number: 6 (lower is better)
Translates to: GNRLQSGAWVCQVGL*TTSSSWPCCSPSTF
Trigger: AAATGTGCTCGGGGAGCAACAAGGCCAAGAAGAAGAAGTCGTCAAGAGTCCCACCTGACAAACCCAAGCACCAGACTGAAGACGATTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CAA 90 bp TCTGAGAATGCCCAGAACTTGAGGAATCTCGAACAGGGGTGCCAATaGGTGGGCAGTCATCACTCGTGCTGGGAAGCTTTGAAGCTTCTT +
Preference number: 6 (lower is better)
Translates to: SENAQNLRNLEQGCQ*VGSHHSCWEALKLL
Trigger: AAGAAGCTTCAAAGCTTCCCAGCACGAGTGATGACTGCCCACCAATTGGCACCCCTGTTCGAGATTCCTCAAGTTCTGGGCATTCTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS TCA 72 bp GCCTTCTGCAATGTCTCCAAACAGCTGACCAAATGCTaGTGCCCTCCAGAACTCATTACGACCCTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: AFCNVSKQLTKC*CPPELITTLFS
Trigger: GGAGAAGAGGGTCGTAATGAGTTCTGGAGGGCATCAGCATTTGGTCAGCTGTTTGGAGACATTGCAGAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018304.7
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS TCA 72 bp CCTGTGATTTGCAACAAACTGGTAAGAATTGGGTTCTaGGACACCTTGCTGAAGTCCTCCCCATGGCCCACC +
Preference number: 6 (lower is better)
Translates to: PVICNKLVRIGF*DTLLKSSPWPT
Trigger: GGTGGGCCATGGGGAGGACTTCAGCAAGGTGTCTCAGAACCCAATTCTTACCAGTTTGTTGCAAATCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS TCA 72 bp GTCAGCGGTCATGCTGACGTCAAACATAGGGTTCTGTaGGTCGACATCCATGGAAAAGAGCTCCCTCTGGAA +
Preference number: 6 (lower is better)
Translates to: VSGHADVKHRVL*VDIHGKELPLE
Trigger: TTCCAGAGGGAGCTCTTTTCCATGGATGTCGACTCACAGAACCCTATGTTTGACGTCAGCATGACCGCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS GCA 72 bp CACCATGTCTTCAACTGTCTCTGCAATGAGAGACAGTaGTGGGGTGTCAGCCTGTATGGTTTCAGCCTTCCT +
Preference number: 6 (lower is better)
Translates to: HHVFNCLCNERQ*WGVSLYGFSLP
Trigger: AGGAAGGCTGAAACCATACAGGCTGACACCCCAGCACTGTCTCTCATTGCAGAGACAGTTGAAGACATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018304.7
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS GCA 72 bp AGAAGAACTGTGAGATGGGGACTTCCCCTCAGTGTCTaGCTTCTTCCGCTTTGGAGGCTTATCCTTGCTCTT +
Preference number: 6 (lower is better)
Translates to: RRTVRWGLPLSV*LLPLWRLILAL
Trigger: AAGAGCAAGGATAAGCCTCCAAAGCGGAAGAAGGCAGACACTGAGGGGAAGTCCCCATCTCACAGTTCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 72 bp GCAGGGTTATCTTTAAGAAGGTTCATGAGCATCGGGTaGTTCTTGGTGTTGCCGGCCATCGAAGAGACAGGT +
Preference number: 6 (lower is better)
Translates to: AGLSLRRFMSIG*FLVLPAIEETG
Trigger: ACCTGTCTCTTCGATGGCCGGCAACACCAAGAACCACCCGATGCTCATGAACCTTCTTAAAGATAACCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 72 bp ATGGAAAAGAGCTCCCTCTGGAAATCGTCTTCAGTCTaGTGCTTGGGTTTGTCAGGTGGGACTCTTGACGAC +
Preference number: 6 (lower is better)
Translates to: MEKSSLWKSSSV*CLGLSGGTLDD
Trigger: GTCGTCAAGAGTCCCACCTGACAAACCCAAGCACCAGACTGAAGACGATTTCCAGAGGGAGCTCTTTTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 72 bp GAATATCAGTTACATCTGGGCCAATGCTGTCTGAACTaGACAGTCGGACCATCCTCTGAATACTGGGCTGGG +
Preference number: 6 (lower is better)
Translates to: EYQLHLGQCCLN*TVGPSSEYWAG
Trigger: CCCAGCCCAGTATTCAGAGGATGGTCCGACTGTCCAGTTCAGACAGCATTGGCCCAGATGTAACTGATATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 72 bp CAGGGGTGCCAATTGGTGGGCAGTCATCACTCGTGCTaGGAAGCTTTGAAGCTTCTTCGGCAATATCTGAAA +
Preference number: 6 (lower is better)
Translates to: QGCQLVGSHHSC*EALKLLRQYLK
Trigger: TTTCAGATATTGCCGAAGAAGCTTCAAAGCTTCCCAGCACGAGTGATGACTGCCCACCAATTGGCACCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 72 bp GAGGCAAGCTTATCTGAGCCTCCGGGAGGCCTTGAATaGGAAGGGGATATGTTTGGCTTACTTATAGAAGGG +
Preference number: 6 (lower is better)
Translates to: EASLSEPPGGLE*EGDMFGLLIEG
Trigger: CCCTTCTATAAGTAAGCCAAACATATCCCCTTCCCATTCAAGGCCTCCCGGAGGCTCAGATAAGCTTGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 72 bp CTGAGCTGGGACTGTTCTGGTAGGATCTCTCTGCTATaGAGGAGCCTGACTCACTTTCACTGTCCACATTCT +
Preference number: 6 (lower is better)
Translates to: LSWDCSGRISLL*RSLTHFHCPHS
Trigger: AGAATGTGGACAGTGAAAGTGAGTCAGGCTCCTCCATAGCAGAGAGATCCTACCAGAACAGTCCCAGCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CAA 90 bp GAAAGACATCAGAATCAAAGAGGGCACTCTGAGAATGCCCAGAACTaGAGGAATCTCGAACAGGGGTGCCAATTGGTGGGCAGTCATCAC +
Preference number: 6 (lower is better)
Translates to: ERHQNQRGHSENAQN*RNLEQGCQLVGSHH
Trigger: GTGATGACTGCCCACCAATTGGCACCCCTGTTCGAGATTCCTCAAGTTCTGGGCATTCTCAGAGTGCCCTCTTTGATTCTGATGTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CAA 90 bp CCATCTCCACCACTTTCTCCAGGTTTCTGTAGCGTCACTTTGGCTTaGATGCTCGGGGAGCCTCCGTCGTGCTTGCTGATAATGATTTTT +
Preference number: 6 (lower is better)
Translates to: PSPPLSPGFCSVTLA*MLGEPPSCLLIMIF
Trigger: AAAAATCATTATCAGCAAGCACGACGGAGGCTCCCCGAGCATCAAAGCCAAAGTGACGCTACAGAAACCTGGAGAAAGTGGTGGAGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS TCA 72 bp GCAGGCTCTGACCATCAGGAAGAGGAGCATCTTTATTaGGAAAATAGCAGTGCTGCTGACCTGGAAGAGCAG +
Preference number: 6 (lower is better)
Translates to: AGSDHQEEEHLY*ENSSAADLEEQ
Trigger: CTGCTCTTCCAGGTCAGCAGCACTGCTATTTTCTCAATAAAGATGCTCCTCTTCCTGATGGTCAGAGCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018304.7
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS TCA 72 bp TCTTTCCCTAATTCTCCAGTGGTCAGTAAAGGACTCTaGCTCCCACTGTGGTGCTCCATCAGATCTGCAGCA +
Preference number: 6 (lower is better)
Translates to: SFPNSPVVSKGL*LPLWCSIRSAA
Trigger: TGCTGCAGATCTGATGGAGCACCACAGTGGGAGTCAGAGTCCTTTACTGACCACTGGAGAATTAGGGAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS TCA 72 bp CTTATAGAAGGGTTCATAAGGGAGGATGGCTTGCCTTaGGGTTTCATCTTGGTACTGCTGGACCCACTGCTC +
Preference number: 6 (lower is better)
Translates to: LIEGFIREDGLP*GFILVLLDPLL
Trigger: GAGCAGTGGGTCCAGCAGTACCAAGATGAAACCTCAAGGCAAGCCATCCTCCCTTATGAACCCTTCTATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS GCA 72 bp CTGATCATATTCAAGATAAGAGGAACTCGGCCAGGGTaGTGGAAGGTGATTTTGCTGACCAGTGTTCCCTGC +
Preference number: 6 (lower is better)
Translates to: LIIFKIRGTRPG*WKVILLTSVPC
Trigger: GCAGGGAACACTGGTCAGCAAAATCACCTTCCAGCACCCTGGCCGAGTTCCTCTTATCTTGAATATGATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018304.7
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS GCA 72 bp TTTGGAGGACATGGGATGGTTAGAAGAATTTGTGCTTaGGCCCATCTGACTGTCTATTGGATCCTCACCCCC +
Preference number: 6 (lower is better)
Translates to: FGGHGMVRRICA*AHLTVYWILTP
Trigger: GGGGGTGAGGATCCAATAGACAGTCAGATGGGCGCAAGCACAAATTCTTCTAACCATCCCATGTCCTCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 72 bp CCCGTTCCCTGTGATTTGCAACAAACTGGTAAGAATTaGGTTCTGAGACACCTTGCTGAAGTCCTCCCCATG +
Preference number: 6 (lower is better)
Translates to: PVPCDLQQTGKN*VLRHLAEVLPM
Trigger: CATGGGGAGGACTTCAGCAAGGTGTCTCAGAACCCAATTCTTACCAGTTTGTTGCAAATCACAGGGAACGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CAA 72 bp TTGGCACTAGTGACTGCGGAGAAAGAAGGGGTCCATTaGTTGTCAGCTGGGTGTGACCCCATAATTAATGGG +
Preference number: 6 (lower is better)
Translates to: LALVTAEKEGVH*LSAGCDPIING
Trigger: CCCATTAATTATGGGGTCACACCCAGCTGACAACAAATGGACCCCTTCTTTCTCCGCAGTCACTAGTGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000018304.7
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS CAA 90 bp GTTTGGCTTACTTATAGAAGGGTTCATAAGGGAGGATGGCTTGCCTaGAGGTTTCATCTTGGTACTGCTGGACCCACTGCTCAGTCCATG +
Preference number: 6 (lower is better)
Translates to: VWLTYRRVHKGGWLA*RFHLGTAGPTAQSM
Trigger: CATGGACTGAGCAGTGGGTCCAGCAGTACCAAGATGAAACCTCAAGGCAAGCCATCCTCCCTTATGAACCCTTCTATAAGTAAGCCAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CAA 90 bp CTTTTCTCACGTTTGCTCTGGAACTCCCCTCCTGACGTGTTATGTTaGGAGGACATGGGATGGTTAGAAGAATTTGTGCTTGCGCCCATC +
Preference number: 6 (lower is better)
Translates to: LFSRLLWNSPPDVLC*EDMGWLEEFVLAPI
Trigger: GATGGGCGCAAGCACAAATTCTTCTAACCATCCCATGTCCTCCAAACATAACACGTCAGGAGGGGAGTTCCAGAGCAAACGTGAGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 72 bp CGCACAAGCTTAATGGTTTCACTCCAAGGTCTGTTCTaGTTAAATTTTGCATGGAGCCGTTCCAGGAGGGAG +
Preference number: 6 (lower is better)
Translates to: RTSLMVSLQGLF*LNFAWSRSRRE
Trigger: CTCCCTCCTGGAACGGCTCCATGCAAAATTTAACCAGAACAGACCTTGGAGTGAAACCATTAAGCTTGTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018304.7
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS CCA 72 bp GTTTCACTCCAAGGTCTGTTCTGGTTAAATTTTGCATaGAGCCGTTCCAGGAGGGAGCTCATCTTACTCAGC +
Preference number: 6 (lower is better)
Translates to: VSLQGLFWLNFA*SRSRRELILLS
Trigger: GCTGAGTAAGATGAGCTCCCTCCTGGAACGGCTCCATGCAAAATTTAACCAGAACAGACCTTGGAGTGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS CAA 72 bp AAGTCCTCCCCATGGCCCACCGACTCATGCCGATCTTaGATGCTCATGCTCATATTAAACAAGGTGGTAATG +
Preference number: 6 (lower is better)
Translates to: KSSPWPTDSCRS*MLMLILNKVVM
Trigger: CATTACCACCTTGTTTAATATGAGCATGAGCATCAAAGATCGGCATGAGTCGGTGGGCCATGGGGAGGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CAA 90 bp GGCTGGGGAAATTTCAAGAAGAAACACGCAGGAAGATCAACACTGTaGGCACTAGTGACTGCGGAGAAAGAAGGGGTCCATTTGTTGTCA +
Preference number: 6 (lower is better)
Translates to: GWGNFKKKHAGRSTL*ALVTAEKEGVHLLS
Trigger: TGACAACAAATGGACCCCTTCTTTCTCCGCAGTCACTAGTGCCAACAGTGTTGATCTTCCTGCGTGTTTCTTCTTGAAATTTCCCCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000018304.7
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS CAA 90 bp CAGGGGTGCCAATTGGTGGGCAGTCATCACTCGTGCTGGGAAGCTTaGAAGCTTCTTCGGCAATATCTGAAAGAATATCAGTTACATCTG +
Preference number: 6 (lower is better)
Translates to: QGCQLVGSHHSCWEA*KLLRQYLKEYQLHL
Trigger: CAGATGTAACTGATATTCTTTCAGATATTGCCGAAGAAGCTTCAAAGCTTCCCAGCACGAGTGATGACTGCCCACCAATTGGCACCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CAA 90 bp CTGGATCCAGAAGACCCTTGGCTAGCATACATACTGCCACTGAGCTaGGAACTTGATGAGCCTTCAGATTTACTGCTTTTCACCTTGCCT +
Preference number: 6 (lower is better)
Translates to: LDPEDPWLAYILPLS*ELDEPSDLLLFTLP
Trigger: AGGCAAGGTGAAAAGCAGTAAATCTGAAGGCTCATCAAGTTCCAAGCTCAGTGGCAGTATGTATGCTAGCCAAGGGTCTTCTGGATCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CAA 90 bp TTAGTGCATCTGACAGCCCCTTGTAGAGTTTACAGCTCACATGTGTaGAGTCTTGCACATCCATCACCACACACACAAGGGAGTCATTCA +
Preference number: 6 (lower is better)
Translates to: LVHLTAPCRVYSSHV*SLAHPSPHTQGSHS
Trigger: TGAATGACTCCCTTGTGTGTGTGGTGATGGATGTGCAAGACTCAACACATGTGAGCTGTAAACTCTACAAGGGGCTGTCAGATGCACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018304.7
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS CAA 90 bp CCAGAAGCAGAGACCTTGGATTTGTCTTTATCACTTTTCTCACGTTaGCTCTGGAACTCCCCTCCTGACGTGTTATGTTTGGAGGACATG +
Preference number: 6 (lower is better)
Translates to: PEAETLDLSLSLFSR*LWNSPPDVLCLEDM
Trigger: CATGTCCTCCAAACATAACACGTCAGGAGGGGAGTTCCAGAGCAAACGTGAGAAAAGTGATAAAGACAAATCCAAGGTCTCTGCTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS TCA 72 bp ACTGTTCTGGTAGGATCTCTCTGCTATGGAGGAGCCTaGCTCACTTTCACTGTCCACATTCTGTGGTGTATA +
Preference number: 6 (lower is better)
Translates to: TVLVGSLCYGGA*LTFTVHILWCI
Trigger: TATACACCACAGAATGTGGACAGTGAAAGTGAGTCAGGCTCCTCCATAGCAGAGAGATCCTACCAGAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS GCA 72 bp GGTAGGAGAATCACTATTGGGGCTTCCAGCAGCATCTaGAATAAGGTCAGCTGGATCAGTGTATGGATTTTC +
Preference number: 6 (lower is better)
Translates to: GRRITIGASSSI*NKVSWISVWIF
Trigger: GAAAATCCATACACTGATCCAGCTGACCTTATTGCAGATGCTGCTGGAAGCCCCAATAGTGATTCTCCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 72 bp GATGAATTTTTGGACTGGCTGGATCCAGAAGACCCTTaGCTAGCATACATACTGCCACTGAGCTTGGAACTT +
Preference number: 6 (lower is better)
Translates to: DEFLDWLDPEDP*LAYILPLSLEL
Trigger: AAGTTCCAAGCTCAGTGGCAGTATGTATGCTAGCCAAGGGTCTTCTGGATCCAGCCAGTCCAAAAATTCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS TCA 72 bp AAGGTGATTTTGCTGACCAGTGTTCCCTGCAGGCTCTaGCCATCAGGAAGAGGAGCATCTTTATTGAGAAAA +
Preference number: 6 (lower is better)
Translates to: KVILLTSVPCRL*PSGRGASLLRK
Trigger: TTTTCTCAATAAAGATGCTCCTCTTCCTGATGGTCAGAGCCTGCAGGGAACACTGGTCAGCAAAATCACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018304.7
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS GCA 72 bp AAGAAATGGGGGATTTCGACCAGTTCTCTGGCTTCATaGTGTGAGACTTCTTCTTGTCTCTGTCTTTGTCTC +
Preference number: 6 (lower is better)
Translates to: KKWGISTSSLAS*CETSSCLCLCL
Trigger: GAGACAAAGACAGAGACAAGAAGAAGTCTCACAGCATGAAGCCAGAGAACTGGTCGAAATCCCCCATTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS GCA 72 bp AATGGTTTCACTCCAAGGTCTGTTCTGGTTAAATTTTaGATGGAGCCGTTCCAGGAGGGAGCTCATCTTACT +
Preference number: 6 (lower is better)
Translates to: NGFTPRSVLVKF*MEPFQEGAHLT
Trigger: AGTAAGATGAGCTCCCTCCTGGAACGGCTCCATGCAAAATTTAACCAGAACAGACCTTGGAGTGAAACCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS CCA 72 bp GTTTGGCTTACTTATAGAAGGGTTCATAAGGGAGGATaGCTTGCCTTGAGGTTTCATCTTGGTACTGCTGGA +
Preference number: 6 (lower is better)
Translates to: VWLTYRRVHKGG*LALRFHLGTAG
Trigger: TCCAGCAGTACCAAGATGAAACCTCAAGGCAAGCCATCCTCCCTTATGAACCCTTCTATAAGTAAGCCAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CCA 72 bp AGGAAGGCTTCTTATTCCTACTGGGAGATTTCCCTTTaGAACTGCCATGTTGATTCTGAGAGGATGACATGG +
Preference number: 6 (lower is better)
Translates to: RKASYSYWEISL*NCHVDSERMTW
Trigger: CCATGTCATCCTCTCAGAATCAACATGGCAGTTCCAAAGGGAAATCTCCCAGTAGGAATAAGAAGCCTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CAA 72 bp GGGTGTGACCCCATAATTAATGGGGCAATTGGGAGTTaGTACATAGCAGAGGTTCCTTCAATTGTCACTGAG +
Preference number: 6 (lower is better)
Translates to: GCDPIINGAIGS*YIAEVPSIVTE
Trigger: CTCAGTGACAATTGAAGGAACCTCTGCTATGTACAAACTCCCAATTGCCCCATTAATTATGGGGTCACACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000018304.7
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS CAA 72 bp AATTTCAAGAAGAAACACGCAGGAAGATCAACACTGTaGGCACTAGTGACTGCGGAGAAAGAAGGGGTCCAT +
Preference number: 6 (lower is better)
Translates to: NFKKKHAGRSTL*ALVTAEKEGVH
Trigger: ATGGACCCCTTCTTTCTCCGCAGTCACTAGTGCCAACAGTGTTGATCTTCCTGCGTGTTTCTTCTTGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018304.7
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS CAA 72 bp CAATTGGTGGGCAGTCATCACTCGTGCTGGGAAGCTTaGAAGCTTCTTCGGCAATATCTGAAAGAATATCAG +
Preference number: 6 (lower is better)
Translates to: QLVGSHHSCWEA*KLLRQYLKEYQ
Trigger: CTGATATTCTTTCAGATATTGCCGAAGAAGCTTCAAAGCTTCCCAGCACGAGTGATGACTGCCCACCAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CAA 72 bp GAAGACCCTTGGCTAGCATACATACTGCCACTGAGCTaGGAACTTGATGAGCCTTCAGATTTACTGCTTTTC +
Preference number: 6 (lower is better)
Translates to: EDPWLAYILPLS*ELDEPSDLLLF
Trigger: GAAAAGCAGTAAATCTGAAGGCTCATCAAGTTCCAAGCTCAGTGGCAGTATGTATGCTAGCCAAGGGTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CAA 90 bp TTGTCAGCTGGGTGTGACCCCATAATTAATGGGGCAATTGGGAGTTaGTACATAGCAGAGGTTCCTTCAATTGTCACTGAGGCATTCATT +
Preference number: 6 (lower is better)
Translates to: LSAGCDPIINGAIGS*YIAEVPSIVTEAFI
Trigger: AATGAATGCCTCAGTGACAATTGAAGGAACCTCTGCTATGTACAAACTCCCAATTGCCCCATTAATTATGGGGTCACACCCAGCTGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000018304.7
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS GCA 72 bp CAATATCTGAAAGAATATCAGTTACATCTGGGCCAATaGTGTCTGAACTGGACAGTCGGACCATCCTCTGAA +
Preference number: 6 (lower is better)
Translates to: QYLKEYQLHLGQ*CLNWTVGPSSE
Trigger: TTCAGAGGATGGTCCGACTGTCCAGTTCAGACAGCATTGGCCCAGATGTAACTGATATTCTTTCAGATATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS CAA 72 bp GAGACCTTGGATTTGTCTTTATCACTTTTCTCACGTTaGCTCTGGAACTCCCCTCCTGACGTGTTATGTTTG +
Preference number: 6 (lower is better)
Translates to: ETLDLSLSLFSR*LWNSPPDVLCL
Trigger: CAAACATAACACGTCAGGAGGGGAGTTCCAGAGCAAACGTGAGAAAAGTGATAAAGACAAATCCAAGGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS TCA 72 bp CAGGAATGGACATACATCTTTGAACAACTTTGGCAATaGAGTCGTCTGTACAGATTAGTGCATCTGACAGCC +
Preference number: 6 (lower is better)
Translates to: QEWTYIFEQLWQ*SRLYRLVHLTA
Trigger: GGCTGTCAGATGCACTAATCTGTACAGACGACTTCATTGCCAAAGTTGTTCAAAGATGTATGTCCATTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018304.7
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS CCA 72 bp CTGTCTGGCTATAGATTCCAAACGATCAGTCATTGCTaGCAAAGATGTTACTTTGAGAGCCTTCTGCAATGT +
Preference number: 6 (lower is better)
Translates to: LSGYRFQTISHC*QRCYFESLLQC
Trigger: ACATTGCAGAAGGCTCTCAAAGTAACATCTTTGCCAGCAATGACTGATCGTTTGGAATCTATAGCCAGACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018304.7
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS CAA 90 bp TTCTTCTTGTCTCTGTCTTTGTCTCTGACTTTCTTCTTTTCCTTTTaGTGCTTCTTATGCTTCTCAGTGCTGTACTCTGGAAGTGGTCGG +
Preference number: 6 (lower is better)
Translates to: FFLSLSLSLTFFFSF*CFLCFSVLYSGSGR
Trigger: CCGACCACTTCCAGAGTACAGCACTGAGAAGCATAAGAAGCACAAAAAGGAAAAGAAGAAAGTCAGAGACAAAGACAGAGACAAGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018304.7
ENSMUST00000107545.9
CDS TCA 72 bp ATTTCATATTCATTAAATGACCCCCACTCCGCGGGGTaGGATAACCAACACTTCCATGAAGAATCTTATCCA +
Preference number: 6 (lower is better)
Translates to: ISYSLNDPHSAG*DNQHFHEESYP
Trigger: TGGATAAGATTCTTCATGGAAGTGTTGGTTATCTCACCCCGCGGAGTGGGGGTCATTTAATGAATATGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000018304.7
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS GCA 72 bp ATTCTGTCTGGCTATAGATTCCAAACGATCAGTCATTaGTGGCAAAGATGTTACTTTGAGAGCCTTCTGCAA +
Preference number: 6 (lower is better)
Translates to: ILSGYRFQTISH*WQRCYFESLLQ
Trigger: TTGCAGAAGGCTCTCAAAGTAACATCTTTGCCAGCAATGACTGATCGTTTGGAATCTATAGCCAGACAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018304.7
ENSMUST00000092735.12
ENSMUST00000107545.9
CDS CCA 72 bp TTGCAGTTTCTGAACAAATGCTTTAGATACTGGAATTaGCTGGGGAAATTTCAAGAAGAAACACGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: LQFLNKCFRYWN*LGKFQEETRRK
Trigger: CTTCCTGCGTGTTTCTTCTTGAAATTTCCCCAGCCAATTCCAGTATCTAAAGCATTTGTTCAGAAACTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018304.7
ENSMUST00000092735.12
ENSMUST00000107545.9