Pregenerated sensors for MECR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028910Ensembl transcript IDs: ENSMUST00000030742.11, ENSMUST00000137321.3
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TCCACTCGGGAAGTTAAGGGTTTATTAGGGAGCCTAGAGTTGGTCCCCCACCCTGCAGTCTGGGAAGGCTaGGGTTCTCATGGAGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: STREVKGLLGSLELVPHPAVWEG*GSHGGA Trigger: GGCCCCTCCATGAGAACCCCAGCCTTCCCAGACTGC...AGGGTGGGGGACCAACTCTAGGCTCCCTAATAAACCCTTAACTTCCCGAGTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| 3UTR-3UTR GCA 90 bp | GAAGTTAAGGGTTTATTAGGGAGCCTAGAGTTGGTCCCCCACCCTCCTGGTAGGCAGTCTTGCCTCTCCTaGTTTCCTCCTGGTCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: EVKGLLGSLELVPHPPGRQSCLS*FPPGPL Trigger: CAGAGGACCAGGAGGAAAGCAGGAGAGGCAAGACTG...CCTACCAGGAGGGTGGGGGACCAACTCTAGGCTCCCTAATAAACCCTTAACTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| 3UTR-3UTR TCA 90 bp | TCCACTCGGGAAGTTAAGGGTTTATTAGGGAGCCTAGAGTTGGTCCCCCACCCTAAGAGACAATATGGGTaGGGCAGTCTGGGAAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: STREVKGLLGSLELVPHPKRQYG*GSLGRL Trigger: CAGCCTTCCCAGACTGCCTCACCCATATTGTCTCTT...AGGGTGGGGGACCAACTCTAGGCTCCCTAATAAACCCTTAACTTCCCGAGTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| 3UTR CCA 72 bp | GGAAGAGACAATATGGGTGAGGCAGTCTGGGAAGGCTaGGGTTCTCATGGAGGGGCCAGCAGACAGCCAGTC | + |
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Preference number: 3 (lower is better) Translates to: GRDNMGEAVWEG*GSHGGASRQPV Trigger: GACTGGCTGTCTGCTGGCCCCTCCATGAGAACCCCAGCCTTCCCAGACTGCCTCACCCATATTGTCTCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| CDS-3UTR CCA 90 bp | GCTGGGGTTCTCATGGAGGGGCCAGCAGACAGCCAGTCTTGCCTCTCCTGCTTTCGGAGTAGGAGGATGTaGTCCGGCCGTGGCGGTACC | + |
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Preference number: 4 (lower is better) Translates to: AGVLMEGPADSQSCLSCFRSRRM*SGRGGT Trigger: GGTACCGCCACGGCCGGACCACATCCTCCTACTCCG...AAAGCAGGAGAGGCAAGACTGGCTGTCTGCTGGCCCCTCCATGAGAACCCCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| CDS-3UTR TCA 90 bp | AGGCTGGGGTTCTCATGGAGGGGCCAGCAGACAGCCAGTCTTGCCTCTCCTGCTTCCCACCAACACAGTTaGGAGCCAATCGGGGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: RLGFSWRGQQTASLASPASHQHS*EPIGAA Trigger: CGCTGCCCCGATTGGCTCTCAACTGTGTTGGTGGGA...AGCAGGAGAGGCAAGACTGGCTGTCTGCTGGCCCCTCCATGAGAACCCCAGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| CDS-3UTR CCA 90 bp | AGGCTGGGGTTCTCATGGAGGGGCCAGCAGACAGCCAGTCTTGCCTCTCCTGCTTCAGCTGGACGACCTTaGCTGGATCCCCATGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: RLGFSWRGQQTASLASPASAGRP*LDPHGC Trigger: GCAACCATGGGGATCCAGCCAAGGTCGTCCAGCTGA...AGCAGGAGAGGCAAGACTGGCTGTCTGCTGGCCCCTCCATGAGAACCCCAGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| 3UTR CAA 72 bp | TGGGGTTCTCATGGAGGGGCCAGCAGACAGCCAGTCTaGCCTCTCCTGCTTTCCTCCTGGTCCTCTGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: WGSHGGASRQPV*PLLLSSWSSGA Trigger: TGCTCCAGAGGACCAGGAGGAAAGCAGGAGAGGCAAGACTGGCTGTCTGCTGGCCCCTCCATGAGAACCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| CDS-3UTR TCA 90 bp | GGGTTCTCATGGAGGGGCCAGCAGACAGCCAGTCTTGCCTCTCCTGCTTTCCTCAGGGCTGAGGCGATCTaGATGACTGCTTGGCCCACT | + |
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Preference number: 4 (lower is better) Translates to: GFSWRGQQTASLASPAFLRAEAI*MTAWPT Trigger: AGTGGGCCAAGCAGTCATTCAGATCGCCTCAGCCCT...GAGGAAAGCAGGAGAGGCAAGACTGGCTGTCTGCTGGCCCCTCCATGAGAACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| CDS-3UTR TCA 90 bp | GAAGTTAAGGGTTTATTAGGGAGCCTAGAGTTGGTCCCCCACCCTCCTGGTAGGAGGCTGTGCAGGGGTTaGCACCTAGGGTGGCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: EVKGLLGSLELVPHPPGRRLCRG*HLGWQR Trigger: GCGCTGCCACCCTAGGTGTCAACCCCTGCACAGCCT...CCTACCAGGAGGGTGGGGGACCAACTCTAGGCTCCCTAATAAACCCTTAACTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| CDS-3UTR GCA 90 bp | GCTGGGGTTCTCATGGAGGGGCCAGCAGACAGCCAGTCTTGCCTCTCCTGCTTTTGGATTGATAGGGGCTaGCAGCATCCTCACGTGGAC | + |
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Preference number: 4 (lower is better) Translates to: AGVLMEGPADSQSCLSCFWIDRG*QHPHVD Trigger: GTCCACGTGAGGATGCTGGCAGCCCCTATCAATCCA...AAAGCAGGAGAGGCAAGACTGGCTGTCTGCTGGCCCCTCCATGAGAACCCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| CDS-3UTR CCA 90 bp | GCTGGGGTTCTCATGGAGGGGCCAGCAGACAGCCAGTCTTGCCTCTCCTGCTTTCTGGTAGCCCTGCAGTaGAACCTCAGAACAGGATGG | + |
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Preference number: 4 (lower is better) Translates to: AGVLMEGPADSQSCLSCFLVALQ*NLRTGW Trigger: CCATCCTGTTCTGAGGTTCCACTGCAGGGCTACCAG...AAAGCAGGAGAGGCAAGACTGGCTGTCTGCTGGCCCCTCCATGAGAACCCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| CDS-3UTR TCA 90 bp | GCTGGGGTTCTCATGGAGGGGCCAGCAGACAGCCAGTCTTGCCTCTCCTGCTTTATCCTTCCACAGCAGTaGGCTCCAGGTTCTTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: AGVLMEGPADSQSCLSCFILPQQ*APGSSA Trigger: AGCTGAAGAACCTGGAGCTCACTGCTGTGGAAGGAT...AAAGCAGGAGAGGCAAGACTGGCTGTCTGCTGGCCCCTCCATGAGAACCCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| CDS-3UTR CCA 90 bp | AGGCTGGGGTTCTCATGGAGGGGCCAGCAGACAGCCAGTCTTGCCTCTCCTGCTTGGTTCTTCTTCCACTaGGACAACCAAAAGCCCCGA | + |
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Preference number: 4 (lower is better) Translates to: RLGFSWRGQQTASLASPAWFFFH*DNQKPR Trigger: TCGGGGCTTTTGGTTGTCCCAGTGGAAGAAGAACCA...AGCAGGAGAGGCAAGACTGGCTGTCTGCTGGCCCCTCCATGAGAACCCCAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| CDS-3UTR TCA 90 bp | GAAGTTAAGGGTTTATTAGGGAGCCTAGAGTTGGTCCCCCACCCTCCTGGTAGGCTGAGGCGATCTGAATaGCTGCTTGGCCCACTCCAC | + |
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Preference number: 4 (lower is better) Translates to: EVKGLLGSLELVPHPPGRLRRSE*LLGPLH Trigger: GTGGAGTGGGCCAAGCAGTCATTCAGATCGCCTCAG...CCTACCAGGAGGGTGGGGGACCAACTCTAGGCTCCCTAATAAACCCTTAACTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| CDS-3UTR GCA 90 bp | CTGGGGTTCTCATGGAGGGGCCAGCAGACAGCCAGTCTTGCCTCTCCTGCTTTCCACTCCACTGTTGGATaGATTCTGGATGACAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: LGFSWRGQQTASLASPAFHSTVG*ILDDRV Trigger: GACTCTGTCATCCAGAATGCATCCAACAGTGGAGTG...GAAAGCAGGAGAGGCAAGACTGGCTGTCTGCTGGCCCCTCCATGAGAACCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| CDS-3UTR CCA 90 bp | CGGGAAGTTAAGGGTTTATTAGGGAGCCTAGAGTTGGTCCCCCACCCTCCTGGTTCCAGGTTCTTCAGCTaGACGACCTTGGCTGGATCC | + |
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Preference number: 4 (lower is better) Translates to: REVKGLLGSLELVPHPPGSRFFS*TTLAGS Trigger: GGATCCAGCCAAGGTCGTCCAGCTGAAGAACCTGGA...ACCAGGAGGGTGGGGGACCAACTCTAGGCTCCCTAATAAACCCTTAACTTCCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| CDS-3UTR CCA 90 bp | TCCACTCGGGAAGTTAAGGGTTTATTAGGGAGCCTAGAGTTGGTCCCCCACCCTAGGGTGGCAGCGCTCTaGAGAGGAATGTCCTTAGGG | + |
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Preference number: 4 (lower is better) Translates to: STREVKGLLGSLELVPHPRVAAL*RGMSLG Trigger: CCCTAAGGACATTCCTCTCCAGAGCGCTGCCACCCT...AGGGTGGGGGACCAACTCTAGGCTCCCTAATAAACCCTTAACTTCCCGAGTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| CDS-3UTR CCA 90 bp | CGGGAAGTTAAGGGTTTATTAGGGAGCCTAGAGTTGGTCCCCCACCCTCCTGGTCAAACCCGCATTTGCTaGGATCACCCAATCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: REVKGLLGSLELVPHPPGQTRIC*DHPISW Trigger: CCAGGAGATTGGGTGATCCCAGCAAATGCGGGTTTG...ACCAGGAGGGTGGGGGACCAACTCTAGGCTCCCTAATAAACCCTTAACTTCCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| CDS-3UTR CCA 90 bp | CGGGAAGTTAAGGGTTTATTAGGGAGCCTAGAGTTGGTCCCCCACCCTCCTGGTCTGTTGGATGCATTCTaGATGACAGAGTCCCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: REVKGLLGSLELVPHPPGLLDAF*MTESPG Trigger: GCCAGGGGACTCTGTCATCCAGAATGCATCCAACAG...ACCAGGAGGGTGGGGGACCAACTCTAGGCTCCCTAATAAACCCTTAACTTCCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| CDS-3UTR CCA 90 bp | CTGGGGTTCTCATGGAGGGGCCAGCAGACAGCCAGTCTTGCCTCTCCTGCTTTCCTCCTTGAACTCATCTaGACTGTGGTTCTTCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: LGFSWRGQQTASLASPAFLLELI*TVVLLP Trigger: TGGAAGAAGAACCACAGTCCAGATGAGTTCAAGGAG...GAAAGCAGGAGAGGCAAGACTGGCTGTCTGCTGGCCCCTCCATGAGAACCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| CDS-3UTR GCA 90 bp | TCCACTCGGGAAGTTAAGGGTTTATTAGGGAGCCTAGAGTTGGTCCCCCACCCTATCTCCTGGCTTCAATaGAGACACACTGCTGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: STREVKGLLGSLELVPHPISWLQ*RHTAAH Trigger: GTGGGCAGCAGTGTGTCTGCATTGAAGCCAGGAGAT...AGGGTGGGGGACCAACTCTAGGCTCCCTAATAAACCCTTAACTTCCCGAGTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| CDS-3UTR CCA 90 bp | TCCACTCGGGAAGTTAAGGGTTTATTAGGGAGCCTAGAGTTGGTCCCCCACCCTGATGACAGAGTCCCCTaGCTGCAGCTGTTCAAAGTC | + |
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Preference number: 4 (lower is better) Translates to: STREVKGLLGSLELVPHPDDRVP*LQLFKV Trigger: GACTTTGAACAGCTGCAGCCAGGGGACTCTGTCATC...AGGGTGGGGGACCAACTCTAGGCTCCCTAATAAACCCTTAACTTCCCGAGTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| CDS-3UTR CCA 90 bp | CGGGAAGTTAAGGGTTTATTAGGGAGCCTAGAGTTGGTCCCCCACCCTCCTGGTCTGTTACAGGCTGTTTaGCCATTCCCCCATAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: REVKGLLGSLELVPHPPGLLQAV*PFPHRS Trigger: TGACCTATGGGGGAATGGCCAAACAGCCTGTAACAG...ACCAGGAGGGTGGGGGACCAACTCTAGGCTCCCTAATAAACCCTTAACTTCCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| CDS-3UTR TCA 90 bp | TACTCTTCATCCTCCACTCGGGAAGTTAAGGGTTTATTAGGGAGCCTAGAGTTGTCAGTGCTTCCTCACTaGACACCGCCTCAGTCCGCC | + |
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Preference number: 4 (lower is better) Translates to: YSSSSTREVKGLLGSLELSVLPH*TPPQSA Trigger: GGCGGACTGAGGCGGTGTTCAGTGAGGAAGCACTGA...CAACTCTAGGCTCCCTAATAAACCCTTAACTTCCCGAGTGGAGGATGAAGAGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| CDS-3UTR GCA 90 bp | TACTCTTCATCCTCCACTCGGGAAGTTAAGGGTTTATTAGGGAGCCTAGAGTTGCCCACCGCTATCACCTaGCCAACGCCTTCGTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: YSSSSTREVKGLLGSLELPTAIT*PTPSFP Trigger: AGGGAACGAAGGCGTTGGGCAGGTGATAGCGGTGGG...CAACTCTAGGCTCCCTAATAAACCCTTAACTTCCCGAGTGGAGGATGAAGAGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| CDS-3UTR CCA 90 bp | GAAGTTAAGGGTTTATTAGGGAGCCTAGAGTTGGTCCCCCACCCTCCTGGTAGGACACAAAAGGCTTCATaGAGGCTTCCAAAGCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: EVKGLLGSLELVPHPPGRTQKAS*RLPKPA Trigger: AGCAGGCTTTGGAAGCCTCCATGAAGCCTTTTGTGT...CCTACCAGGAGGGTGGGGGACCAACTCTAGGCTCCCTAATAAACCCTTAACTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| CDS-3UTR TCA 90 bp | TACTCTTCATCCTCCACTCGGGAAGTTAAGGGTTTATTAGGGAGCCTAGAGTTGTGGATGCATTCTGGATaGCAGAGTCCCCTGGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: YSSSSTREVKGLLGSLELWMHSG*QSPLAA Trigger: TGCAGCCAGGGGACTCTGTCATCCAGAATGCATCCA...CAACTCTAGGCTCCCTAATAAACCCTTAACTTCCCGAGTGGAGGATGAAGAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| CDS-3UTR TCA 90 bp | TCCACTCGGGAAGTTAAGGGTTTATTAGGGAGCCTAGAGTTGGTCCCCCACCCTTTAGCTCTTCCTCTGTaGGGACATAATCAGCTCCTA | + |
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Preference number: 4 (lower is better) Translates to: STREVKGLLGSLELVPHPLALPL*GHNQLL Trigger: TAGGAGCTGATTATGTCCTCACAGAGGAAGAGCTAA...AGGGTGGGGGACCAACTCTAGGCTCCCTAATAAACCCTTAACTTCCCGAGTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| CDS-3UTR GCA 90 bp | TACTCTTCATCCTCCACTCGGGAAGTTAAGGGTTTATTAGGGAGCCTAGAGTTGACAGAGTCCCCTGGCTaGAGCTGTTCAAAGTCCACC | + |
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Preference number: 4 (lower is better) Translates to: YSSSSTREVKGLLGSLELTESPG*SCSKST Trigger: GGTGGACTTTGAACAGCTGCAGCCAGGGGACTCTGT...CAACTCTAGGCTCCCTAATAAACCCTTAACTTCCCGAGTGGAGGATGAAGAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| CDS-3UTR CCA 90 bp | TACTCTTCATCCTCCACTCGGGAAGTTAAGGGTTTATTAGGGAGCCTAGAGTTGCTGGACGACCTTGGCTaGATCCCCATGGTTGCCATA | + |
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Preference number: 4 (lower is better) Translates to: YSSSSTREVKGLLGSLELLDDLG*IPMVAI Trigger: TATGGCAACCATGGGGATCCAGCCAAGGTCGTCCAG...CAACTCTAGGCTCCCTAATAAACCCTTAACTTCCCGAGTGGAGGATGAAGAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| CDS-3UTR CCA 90 bp | TACTCTTCATCCTCCACTCGGGAAGTTAAGGGTTTATTAGGGAGCCTAGAGTTGCAACAGCAGGCAGCTTaGGAAGGAGGCCATAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: YSSSSTREVKGLLGSLELQQQAA*EGGHSS Trigger: GGAACTATGGCCTCCTTCCCAAGCTGCCTGCTGTTG...CAACTCTAGGCTCCCTAATAAACCCTTAACTTCCCGAGTGGAGGATGAAGAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| 3UTR CAA 72 bp | ACTCGGGAAGTTAAGGGTTTATTAGGGAGCCTAGAGTaGGTCCCCCACCCTCCTGGTAGGAAGAGACAATAT | + |
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Preference number: 4 (lower is better) Translates to: TREVKGLLGSLE*VPHPPGRKRQY Trigger: ATATTGTCTCTTCCTACCAGGAGGGTGGGGGACCAACTCTAGGCTCCCTAATAAACCCTTAACTTCCCGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| CDS-3UTR CCA 90 bp | GAAGTTAAGGGTTTATTAGGGAGCCTAGAGTTGGTCCCCCACCCTCCTGGTAGGCATATTTATGTCAGATaGATTGATAGGGGCTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: EVKGLLGSLELVPHPPGRHIYVR*IDRGCQ Trigger: CTGGCAGCCCCTATCAATCCATCTGACATAAATATG...CCTACCAGGAGGGTGGGGGACCAACTCTAGGCTCCCTAATAAACCCTTAACTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| CDS CCA 90 bp | GCGCCCGCACCCGTGACGGCTCAGAGAGAGCGGAGTAGGAGGATGTaGTCCGGCCGTGGCGGTACCAAGCCTCGAGGAGACCCGCAAGCT | + |
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Preference number: 5 (lower is better) Translates to: APAPVTAQRERSRRM*SGRGGTKPRGDPQA Trigger: AGCTTGCGGGTCTCCTCGAGGCTTGGTACCGCCACGGCCGGACCACATCCTCCTACTCCGCTCTCTCTGAGCCGTCACGGGTGCGGGCGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030742.11 ENSMUST00000137321.3 |
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| CDS TCA 90 bp | CTTGGCTGGATCCCCATGGTTGCCATAGACCAGCGCCCGCACCCGTaGCGGCTCAGAGAGAGCGGAGTAGGAGGATGTGGTCCGGCCGTG | + |
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Preference number: 5 (lower is better) Translates to: LGWIPMVAIDQRPHP*RLRESGVGGCGPAV Trigger: CACGGCCGGACCACATCCTCCTACTCCGCTCTCTCTGAGCCGTCACGGGTGCGGGCGCTGGTCTATGGCAACCATGGGGATCCAGCCAAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030742.11 ENSMUST00000137321.3 |
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| CDS GCA 90 bp | GCTCCAGGTTCTTCAGCTGGACGACCTTGGCTGGATCCCCATGGTTaGCATAGACCAGCGCCCGCACCCGTGACGGCTCAGAGAGAGCGG | + |
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Preference number: 5 (lower is better) Translates to: APGSSAGRPWLDPHG*HRPAPAPVTAQRER Trigger: CCGCTCTCTCTGAGCCGTCACGGGTGCGGGCGCTGGTCTATGGCAACCATGGGGATCCAGCCAAGGTCGTCCAGCTGAAGAACCTGGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| CDS TCA 90 bp | GGGCTGCCAGCATCCTCACGTGGACGTCAGATCCTTCCACAGCAGTaGGCTCCAGGTTCTTCAGCTGGACGACCTTGGCTGGATCCCCAT | + |
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Preference number: 5 (lower is better) Translates to: GLPASSRGRQILPQQ*APGSSAGRPWLDPH Trigger: ATGGGGATCCAGCCAAGGTCGTCCAGCTGAAGAACCTGGAGCTCACTGCTGTGGAAGGATCTGACGTCCACGTGAGGATGCTGGCAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| CDS GCA 90 bp | TCTCCTGGCTTCAATGCAGACACACTGCTGCCCACCGCTATCACCTaGCCAACGCCTTCGTTCCCTCCAACAGCAGGCAGCTTGGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: SPGFNADTLLPTAIT*PTPSFPPTAGSLGR Trigger: CCTTCCCAAGCTGCCTGCTGTTGGAGGGAACGAAGGCGTTGGGCAGGTGATAGCGGTGGGCAGCAGTGTGTCTGCATTGAAGCCAGGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030742.11 ENSMUST00000137321.3 |
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| CDS CCA 90 bp | CCGCCAGGTTCCCAAACCCGCATTTGCTGGGATCACCCAATCTCCTaGCTTCAATGCAGACACACTGCTGCCCACCGCTATCACCTGCCC | + |
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Preference number: 5 (lower is better) Translates to: PPGSQTRICWDHPIS*LQCRHTAAHRYHLP Trigger: GGGCAGGTGATAGCGGTGGGCAGCAGTGTGTCTGCATTGAAGCCAGGAGATTGGGTGATCCCAGCAAATGCGGGTTTGGGAACCTGGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030742.11 ENSMUST00000137321.3 |
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| CDS CCA 90 bp | TTCCAAAGCCTGCTGGTAGCCCTGCAGTGGAACCTCAGAACAGGATaGGGCTGTGAGCCGGCCTTGGCGGATGAGGTTGCAGAGAGTGAG | + |
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Preference number: 5 (lower is better) Translates to: FQSLLVALQWNLRTG*GCEPALADEVAESE Trigger: CTCACTCTCTGCAACCTCATCCGCCAAGGCCGGCTCACAGCCCCATCCTGTTCTGAGGTTCCACTGCAGGGCTACCAGCAGGCTTTGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| CDS-3UTR CAA 90 bp | AGGCTGGGGTTCTCATGGAGGGGCCAGCAGACAGCCAGTCTTGCCTCTCCTGCTGATCTGAATGACTGCTaGGCCCACTCCACTGTTGGA | + |
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Preference number: 5 (lower is better) Translates to: RLGFSWRGQQTASLASPADLNDC*AHSTVG Trigger: TCCAACAGTGGAGTGGGCCAAGCAGTCATTCAGATC...AGCAGGAGAGGCAAGACTGGCTGTCTGCTGGCCCCTCCATGAGAACCCCAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| CDS GCA 90 bp | TTGCTGGGATCACCCAATCTCCTGGCTTCAATGCAGACACACTGCTaGCCACCGCTATCACCTGCCCAACGCCTTCGTTCCCTCCAACAG | + |
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Preference number: 5 (lower is better) Translates to: LLGSPNLLASMQTHC*PPLSPAQRLRSLQQ Trigger: CTGTTGGAGGGAACGAAGGCGTTGGGCAGGTGATAGCGGTGGGCAGCAGTGTGTCTGCATTGAAGCCAGGAGATTGGGTGATCCCAGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030742.11 ENSMUST00000137321.3 |
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| CDS GCA 90 bp | TCCCAAACCCGCATTTGCTGGGATCACCCAATCTCCTGGCTTCAATaGAGACACACTGCTGCCCACCGCTATCACCTGCCCAACGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: SQTRICWDHPISWLQ*RHTAAHRYHLPNAF Trigger: GAAGGCGTTGGGCAGGTGATAGCGGTGGGCAGCAGTGTGTCTGCATTGAAGCCAGGAGATTGGGTGATCCCAGCAAATGCGGGTTTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030742.11 ENSMUST00000137321.3 |
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| CDS GCA 90 bp | GGTGGCAGCGCTCTGGAGAGGAATGTCCTTAGGGATTCCAATCAGTaGTTCCTCACTGAACACCGCCTCAGTCCGCCAGGTTCCCAAACC | + |
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Preference number: 5 (lower is better) Translates to: GGSALERNVLRDSNQ*FLTEHRLSPPGSQT Trigger: GGTTTGGGAACCTGGCGGACTGAGGCGGTGTTCAGTGAGGAAGCACTGATTGGAATCCCTAAGGACATTCCTCTCCAGAGCGCTGCCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030742.11 ENSMUST00000137321.3 |
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| CDS CCA 90 bp | CCCTGCAGTGGAACCTCAGAACAGGATGGGGCTGTGAGCCGGCCTTaGCGGATGAGGTTGCAGAGAGTGAGAATCAGCTCCTTGAACTCA | + |
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Preference number: 5 (lower is better) Translates to: PCSGTSEQDGAVSRP*RMRLQRVRISSLNS Trigger: TGAGTTCAAGGAGCTGATTCTCACTCTCTGCAACCTCATCCGCCAAGGCCGGCTCACAGCCCCATCCTGTTCTGAGGTTCCACTGCAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| CDS-3UTR CAA 90 bp | CTGGGGTTCTCATGGAGGGGCCAGCAGACAGCCAGTCTTGCCTCTCCTGCTTTCCTGTCTCGGACAACGTaGATGGTCTTTAGGCGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LGFSWRGQQTASLASPAFLSRTT*MVFRRR Trigger: CCTTCGCCTAAAGACCATCAACGTTGTCCGAGACAG...GAAAGCAGGAGAGGCAAGACTGGCTGTCTGCTGGCCCCTCCATGAGAACCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
||
| CDS GCA 90 bp | CATTTGCTGGGATCACCCAATCTCCTGGCTTCAATGCAGACACACTaGTGCCCACCGCTATCACCTGCCCAACGCCTTCGTTCCCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: HLLGSPNLLASMQTH*CPPLSPAQRLRSLQ Trigger: TTGGAGGGAACGAAGGCGTTGGGCAGGTGATAGCGGTGGGCAGCAGTGTGTCTGCATTGAAGCCAGGAGATTGGGTGATCCCAGCAAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030742.11 ENSMUST00000137321.3 |
||
| CDS-3UTR CAA 90 bp | CGGGAAGTTAAGGGTTTATTAGGGAGCCTAGAGTTGGTCCCCCACCCTCCTGGTTTCCCACCAACACAGTaGAGAGCCAATCGGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: REVKGLLGSLELVPHPPGFPPTQ*RANRGS Trigger: GCTGCCCCGATTGGCTCTCAACTGTGTTGGTGGGAA...ACCAGGAGGGTGGGGGACCAACTCTAGGCTCCCTAATAAACCCTTAACTTCCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
||
| CDS-3UTR CAA 90 bp | TCCACTCGGGAAGTTAAGGGTTTATTAGGGAGCCTAGAGTTGGTCCCCCACCCTTTCAGCTGGACGACCTaGGCTGGATCCCCATGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: STREVKGLLGSLELVPHPFSWTT*AGSPWL Trigger: CAACCATGGGGATCCAGCCAAGGTCGTCCAGCTGAA...AGGGTGGGGGACCAACTCTAGGCTCCCTAATAAACCCTTAACTTCCCGAGTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
||
| CDS TCA 90 bp | TCTCGGACAACGTTGATGGTCTTTAGGCGAAGGGCTGAGGCGATCTaGATGACTGCTTGGCCCACTCCACTGTTGGATGCATTCTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: SRTTLMVFRRRAEAI*MTAWPTPLLDAFWM Trigger: CATCCAGAATGCATCCAACAGTGGAGTGGGCCAAGCAGTCATTCAGATCGCCTCAGCCCTTCGCCTAAAGACCATCAACGTTGTCCGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030742.11 ENSMUST00000137321.3 |
||
| CDS-3UTR CAA 90 bp | GAAGTTAAGGGTTTATTAGGGAGCCTAGAGTTGGTCCCCCACCCTCCTGGTAGGTGGCCCACTCCACTGTaGGATGCATTCTGGATGACA | + |
|
Preference number: 5 (lower is better) Translates to: EVKGLLGSLELVPHPPGRWPTPL*DAFWMT Trigger: TGTCATCCAGAATGCATCCAACAGTGGAGTGGGCCA...CCTACCAGGAGGGTGGGGGACCAACTCTAGGCTCCCTAATAAACCCTTAACTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
||
| CDS-3UTR CAA 90 bp | TCCACTCGGGAAGTTAAGGGTTTATTAGGGAGCCTAGAGTTGGTCCCCCACCCTCTGTCAGTTAGCTTCTaGATGTCGGGTCTGTCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: STREVKGLLGSLELVPHPLSVSF*MSGLSR Trigger: CCGAGACAGACCCGACATCAAGAAGCTAACTGACAG...AGGGTGGGGGACCAACTCTAGGCTCCCTAATAAACCCTTAACTTCCCGAGTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
||
| CDS CCA 90 bp | ATATTTATGTCAGATGGATTGATAGGGGCTGCCAGCATCCTCACGTaGACGTCAGATCCTTCCACAGCAGTGAGCTCCAGGTTCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: IFMSDGLIGAASILT*TSDPSTAVSSRFFS Trigger: GCTGAAGAACCTGGAGCTCACTGCTGTGGAAGGATCTGACGTCCACGTGAGGATGCTGGCAGCCCCTATCAATCCATCTGACATAAATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030742.11 ENSMUST00000137321.3 |
||
| CDS CCA 90 bp | CTTGGGAAGGAGGCCATAGTTCCCTTGGATCATATTTATGTCAGATaGATTGATAGGGGCTGCCAGCATCCTCACGTGGACGTCAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: LGKEAIVPLDHIYVR*IDRGCQHPHVDVRS Trigger: GGATCTGACGTCCACGTGAGGATGCTGGCAGCCCCTATCAATCCATCTGACATAAATATGATCCAAGGGAACTATGGCCTCCTTCCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030742.11 ENSMUST00000137321.3 |
||
| CDS-3UTR CAA 90 bp | TACTCTTCATCCTCCACTCGGGAAGTTAAGGGTTTATTAGGGAGCCTAGAGTTGCCTTGGCGGATGAGGTaGCAGAGAGTGAGAATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: YSSSSTREVKGLLGSLELPWRMR*QRVRIS Trigger: GCTGATTCTCACTCTCTGCAACCTCATCCGCCAAGG...CAACTCTAGGCTCCCTAATAAACCCTTAACTTCCCGAGTGGAGGATGAAGAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
||
| CDS-3UTR CAA 90 bp | TCCACTCGGGAAGTTAAGGGTTTATTAGGGAGCCTAGAGTTGGTCCCCCACCCTGAGGCCATAGTTCCCTaGGATCATATTTATGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: STREVKGLLGSLELVPHPEAIVP*DHIYVR Trigger: TCTGACATAAATATGATCCAAGGGAACTATGGCCTC...AGGGTGGGGGACCAACTCTAGGCTCCCTAATAAACCCTTAACTTCCCGAGTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
||
| CDS-3UTR CAA 90 bp | TACTCTTCATCCTCCACTCGGGAAGTTAAGGGTTTATTAGGGAGCCTAGAGTTGTTTATGTCAGATGGATaGATAGGGGCTGCCAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: YSSSSTREVKGLLGSLELFMSDG*IGAASI Trigger: GATGCTGGCAGCCCCTATCAATCCATCTGACATAAA...CAACTCTAGGCTCCCTAATAAACCCTTAACTTCCCGAGTGGAGGATGAAGAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
||
| CDS TCA 72 bp | CCGTGGCGGTACCAAGCCTCGAGGAGACCCGCAAGCTaGGGTGCCCGGGCTCGCGCCCCTGTCACTCGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PWRYQASRRPAS*GARARAPVTRW Trigger: CCAGCGAGTGACAGGGGCGCGAGCCCGGGCACCTCAGCTTGCGGGTCTCCTCGAGGCTTGGTACCGCCACGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030742.11 ENSMUST00000137321.3 |
||
| CDS GCA 72 bp | GCGGTACCAAGCCTCGAGGAGACCCGCAAGCTGAGGTaGCCGGGCTCGCGCCCCTGTCACTCGCTGGCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: AVPSLEETRKLR*PGSRPCHSLAD Trigger: GTCAGCCAGCGAGTGACAGGGGCGCGAGCCCGGGCACCTCAGCTTGCGGGTCTCCTCGAGGCTTGGTACCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030742.11 ENSMUST00000137321.3 |
||
| CDS CCA 72 bp | CCCGTGACGGCTCAGAGAGAGCGGAGTAGGAGGATGTaGTCCGGCCGTGGCGGTACCAAGCCTCGAGGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: PVTAQRERSRRM*SGRGGTKPRGD Trigger: GTCTCCTCGAGGCTTGGTACCGCCACGGCCGGACCACATCCTCCTACTCCGCTCTCTCTGAGCCGTCACGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030742.11 ENSMUST00000137321.3 |
||
| CDS GCA 72 bp | CTCCAGCATGGACGACCTTGGCTGGATCCCCATGGTTaGCATAGACCAGCGCCCGCACCCGTGACGGCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: LQHGRPWLDPHG*HRPAPAPVTAQ Trigger: CTGAGCCGTCACGGGTGCGGGCGCTGGTCTATGGCAACCATGGGGATCCAGCCAAGGTCGTCCATGCTGGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137321.3 |
||
| CDS GCA 72 bp | TCTTCAGCTGGACGACCTTGGCTGGATCCCCATGGTTaGCATAGACCAGCGCCCGCACCCGTGACGGCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: SSAGRPWLDPHG*HRPAPAPVTAQ Trigger: CTGAGCCGTCACGGGTGCGGGCGCTGGTCTATGGCAACCATGGGGATCCAGCCAAGGTCGTCCAGCTGAAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
||
| CDS TCA 72 bp | ATCCCCATGGTTGCCATAGACCAGCGCCCGCACCCGTaGCGGCTCAGAGAGAGCGGAGTAGGAGGATGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: IPMVAIDQRPHP*RLRESGVGGCG Trigger: ACCACATCCTCCTACTCCGCTCTCTCTGAGCCGTCACGGGTGCGGGCGCTGGTCTATGGCAACCATGGGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030742.11 ENSMUST00000137321.3 |
||
| CDS CCA 72 bp | CTGCTGGTAGCCCTGCAGTGGAACCTCAGAACAGGATaGGGCTGTGAGCCGGCCTTGGCGGATGAGGTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LLVALQWNLRTG*GCEPALADEVA Trigger: TGCAACCTCATCCGCCAAGGCCGGCTCACAGCCCCATCCTGTTCTGAGGTTCCACTGCAGGGCTACCAGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
||
| CDS CCA 72 bp | AGTGAGCTCCAGGTTCTTCAGCTGGACGACCTTGGCTaGATCCCCATGGTTGCCATAGACCAGCGCCCGCAC | + |
|
Preference number: 6 (lower is better) Translates to: SELQVLQLDDLG*IPMVAIDQRPH Trigger: GTGCGGGCGCTGGTCTATGGCAACCATGGGGATCCAGCCAAGGTCGTCCAGCTGAAGAACCTGGAGCTCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
||
| CDS CCA 72 bp | TTACAGGCTGTTTGGCCATTCCCCCATAGGTCACCATaGTTCCTCCGGGCGCTAGGTGCCGGAGCAGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LQAVWPFPHRSP*FLRALGAGAAL Trigger: CAGAGCTGCTCCGGCACCTAGCGCCCGGAGGAACCATGGTGACCTATGGGGGAATGGCCAAACAGCCTGTAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
||
| CDS CCA 72 bp | GCCAGTTCCTGTAACTCCAGCATGGACGACCTTGGCTaGATCCCCATGGTTGCCATAGACCAGCGCCCGCAC | + |
|
Preference number: 6 (lower is better) Translates to: ASSCNSSMDDLG*IPMVAIDQRPH Trigger: GTGCGGGCGCTGGTCTATGGCAACCATGGGGATCCAGCCAAGGTCGTCCATGCTGGAGTTACAGGAACTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137321.3 |
||
| CDS GCA 72 bp | TTCAATGCAGACACACTGCTGCCCACCGCTATCACCTaGCCAACGCCTTCGTTCCCTCCAACAGCAGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FNADTLLPTAIT*PTPSFPPTAGS Trigger: GCTGCCTGCTGTTGGAGGGAACGAAGGCGTTGGGCAGGTGATAGCGGTGGGCAGCAGTGTGTCTGCATTGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030742.11 ENSMUST00000137321.3 |
||
| CDS CCA 72 bp | GGAACCTCAGAACAGGATGGGGCTGTGAGCCGGCCTTaGCGGATGAGGTTGCAGAGAGTGAGAATCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GTSEQDGAVSRP*RMRLQRVRISS Trigger: GGAGCTGATTCTCACTCTCTGCAACCTCATCCGCCAAGGCCGGCTCACAGCCCCATCCTGTTCTGAGGTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
||
| CDS CAA 90 bp | GCCCTGCAGTGGAACCTCAGAACAGGATGGGGCTGTGAGCCGGCCTaGGCGGATGAGGTTGCAGAGAGTGAGAATCAGCTCCTTGAACTC | + |
|
Preference number: 6 (lower is better) Translates to: ALQWNLRTGWGCEPA*ADEVAESENQLLEL Trigger: GAGTTCAAGGAGCTGATTCTCACTCTCTGCAACCTCATCCGCCAAGGCCGGCTCACAGCCCCATCCTGTTCTGAGGTTCCACTGCAGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
||
| CDS TCA 72 bp | GCATCCTCACGTGGACGTCAGATCCTTCCACAGCAGTaGGCTCCAGGTTCTTCAGCTGGACGACCTTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ASSRGRQILPQQ*APGSSAGRPWL Trigger: CAGCCAAGGTCGTCCAGCTGAAGAACCTGGAGCTCACTGCTGTGGAAGGATCTGACGTCCACGTGAGGATGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
||
| CDS GCA 72 bp | TCACCCAATCTCCTGGCTTCAATGCAGACACACTGCTaGCCACCGCTATCACCTGCCCAACGCCTTCGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SPNLLASMQTHC*PPLSPAQRLRS Trigger: GGAACGAAGGCGTTGGGCAGGTGATAGCGGTGGGCAGCAGTGTGTCTGCATTGAAGCCAGGAGATTGGGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030742.11 ENSMUST00000137321.3 |
||
| CDS GCA 72 bp | GGATCACCCAATCTCCTGGCTTCAATGCAGACACACTaGTGCCCACCGCTATCACCTGCCCAACGCCTTCGT | + |
|
Preference number: 6 (lower is better) Translates to: GSPNLLASMQTH*CPPLSPAQRLR Trigger: ACGAAGGCGTTGGGCAGGTGATAGCGGTGGGCAGCAGTGTGTCTGCATTGAAGCCAGGAGATTGGGTGATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030742.11 ENSMUST00000137321.3 |
||
| CDS GCA 72 bp | CGCATTTGCTGGGATCACCCAATCTCCTGGCTTCAATaGAGACACACTGCTGCCCACCGCTATCACCTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RICWDHPISWLQ*RHTAAHRYHLP Trigger: GGGCAGGTGATAGCGGTGGGCAGCAGTGTGTCTGCATTGAAGCCAGGAGATTGGGTGATCCCAGCAAATGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030742.11 ENSMUST00000137321.3 |
||
| CDS GCA 72 bp | CACCGCCTCAGTCCGCCAGGTTCCCAAACCCGCATTTaGTGGGATCACCCAATCTCCTGGCTTCAATGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: HRLSPPGSQTRI*WDHPISWLQCR Trigger: TCTGCATTGAAGCCAGGAGATTGGGTGATCCCAGCAAATGCGGGTTTGGGAACCTGGCGGACTGAGGCGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030742.11 ENSMUST00000137321.3 |
||
| CDS CCA 72 bp | CGCCTCAGTCCGCCAGGTTCCCAAACCCGCATTTGCTaGGATCACCCAATCTCCTGGCTTCAATGCAGACAC | + |
|
Preference number: 6 (lower is better) Translates to: RLSPPGSQTRIC*DHPISWLQCRH Trigger: GTGTCTGCATTGAAGCCAGGAGATTGGGTGATCCCAGCAAATGCGGGTTTGGGAACCTGGCGGACTGAGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030742.11 ENSMUST00000137321.3 |
||
| CDS CAA 72 bp | ACACCGCCTCAGTCCGCCAGGTTCCCAAACCCGCATTaGCTGGGATCACCCAATCTCCTGGCTTCAATGCAG | + |
|
Preference number: 6 (lower is better) Translates to: TPPQSARFPNPH*LGSPNLLASMQ Trigger: CTGCATTGAAGCCAGGAGATTGGGTGATCCCAGCAAATGCGGGTTTGGGAACCTGGCGGACTGAGGCGGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030742.11 ENSMUST00000137321.3 |
||
| CDS CAA 72 bp | TGGAACCTCAGAACAGGATGGGGCTGTGAGCCGGCCTaGGCGGATGAGGTTGCAGAGAGTGAGAATCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: WNLRTGWGCEPA*ADEVAESENQL Trigger: GAGCTGATTCTCACTCTCTGCAACCTCATCCGCCAAGGCCGGCTCACAGCCCCATCCTGTTCTGAGGTTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
||
| CDS CAA 90 bp | ACCTCAGAACAGGATGGGGCTGTGAGCCGGCCTTGGCGGATGAGGTaGCAGAGAGTGAGAATCAGCTCCTTGAACTCATCTGGACTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: TSEQDGAVSRPWRMR*QRVRISSLNSSGLW Trigger: CCACAGTCCAGATGAGTTCAAGGAGCTGATTCTCACTCTCTGCAACCTCATCCGCCAAGGCCGGCTCACAGCCCCATCCTGTTCTGAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
||
| CDS CCA 72 bp | TCAGATGGATTGATAGGGGCTGCCAGCATCCTCACGTaGACGTCAGATCCTTCCACAGCAGTGAGCTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SDGLIGAASILT*TSDPSTAVSSR Trigger: CCTGGAGCTCACTGCTGTGGAAGGATCTGACGTCCACGTGAGGATGCTGGCAGCCCCTATCAATCCATCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030742.11 ENSMUST00000137321.3 |
||
| CDS CCA 72 bp | GCTGTGCAGGGGTTGACACCTAGGGTGGCAGCGCTCTaGAGAGGAATGTCCTTAGGGATTCCAATCAGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: AVQGLTPRVAAL*RGMSLGIPISA Trigger: AGCACTGATTGGAATCCCTAAGGACATTCCTCTCCAGAGCGCTGCCACCCTAGGTGTCAACCCCTGCACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030742.11 ENSMUST00000137321.3 |
||
| CDS CAA 72 bp | CAGGATGGGGCTGTGAGCCGGCCTTGGCGGATGAGGTaGCAGAGAGTGAGAATCAGCTCCTTGAACTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: QDGAVSRPWRMR*QRVRISSLNSS Trigger: AGATGAGTTCAAGGAGCTGATTCTCACTCTCTGCAACCTCATCCGCCAAGGCCGGCTCACAGCCCCATCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
||
| CDS TCA 72 bp | CTGCTTGGCCCACTCCACTGTTGGATGCATTCTGGATaGCAGAGTCCCCTGGCTGCAGCTGTTCAAAGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LLGPLHCWMHSG*QSPLAAAVQSP Trigger: TGGACTTTGAACAGCTGCAGCCAGGGGACTCTGTCATCCAGAATGCATCCAACAGTGGAGTGGGCCAAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030742.11 ENSMUST00000137321.3 |
||
| CDS GCA 72 bp | GCTCTGGAGAGGAATGTCCTTAGGGATTCCAATCAGTaGTTCCTCACTGAACACCGCCTCAGTCCGCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: ALERNVLRDSNQ*FLTEHRLSPPG Trigger: ACCTGGCGGACTGAGGCGGTGTTCAGTGAGGAAGCACTGATTGGAATCCCTAAGGACATTCCTCTCCAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030742.11 ENSMUST00000137321.3 |
||
| CDS GCA 72 bp | GATCTGAATGACTGCTTGGCCCACTCCACTGTTGGATaGATTCTGGATGACAGAGTCCCCTGGCTGCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: DLNDCLAHSTVG*ILDDRVPWLQL Trigger: CAGCTGCAGCCAGGGGACTCTGTCATCCAGAATGCATCCAACAGTGGAGTGGGCCAAGCAGTCATTCAGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030742.11 ENSMUST00000137321.3 |
||
| CDS CCA 72 bp | TCCCAAACCCGCATTTGCTGGGATCACCCAATCTCCTaGCTTCAATGCAGACACACTGCTGCCCACCGCTAT | + |
|
Preference number: 6 (lower is better) Translates to: SQTRICWDHPIS*LQCRHTAAHRY Trigger: ATAGCGGTGGGCAGCAGTGTGTCTGCATTGAAGCCAGGAGATTGGGTGATCCCAGCAAATGCGGGTTTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030742.11 ENSMUST00000137321.3 |
||
| CDS CAA 90 bp | TTCCCACCAACACAGTTGAGAGCCAATCGGGGCAGCGGCAGGTCCTaGAAGATGGTTTTTGTCTCGGGCATCCTTAGCTCTTCCTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: FPPTQLRANRGSGRS*KMVFVSGILSSSSV Trigger: CACAGAGGAAGAGCTAAGGATGCCCGAGACAAAAACCATCTTCAAGGACCTGCCGCTGCCCCGATTGGCTCTCAACTGTGTTGGTGGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
||
| CDS TCA 72 bp | ACGTTGATGGTCTTTAGGCGAAGGGCTGAGGCGATCTaGATGACTGCTTGGCCCACTCCACTGTTGGATGCA | + |
|
Preference number: 6 (lower is better) Translates to: TLMVFRRRAEAI*MTAWPTPLLDA Trigger: TGCATCCAACAGTGGAGTGGGCCAAGCAGTCATTCAGATCGCCTCAGCCCTTCGCCTAAAGACCATCAACGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030742.11 ENSMUST00000137321.3 |
||
| CDS CCA 72 bp | ATGACTGCTTGGCCCACTCCACTGTTGGATGCATTCTaGATGACAGAGTCCCCTGGCTGCAGCTGTTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: MTAWPTPLLDAF*MTESPGCSCSK Trigger: CTTTGAACAGCTGCAGCCAGGGGACTCTGTCATCCAGAATGCATCCAACAGTGGAGTGGGCCAAGCAGTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030742.11 ENSMUST00000137321.3 |
||
| CDS CAA 72 bp | ACACAGTTGAGAGCCAATCGGGGCAGCGGCAGGTCCTaGAAGATGGTTTTTGTCTCGGGCATCCTTAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: TQLRANRGSGRS*KMVFVSGILSS Trigger: AGAGCTAAGGATGCCCGAGACAAAAACCATCTTCAAGGACCTGCCGCTGCCCCGATTGGCTCTCAACTGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
||
| CDS CCA 72 bp | GTTCTTCAGCCTTCTAGCAGCTCTCAGAGTTCTGTGTaGAACACAAGGACCAGACTTCCGGTCCTCAGCACT | + |
|
Preference number: 6 (lower is better) Translates to: VLQPSSSSQSSV*NTRTRLPVLST Trigger: AGTGCTGAGGACCGGAAGTCTGGTCCTTGTGTTCCACACAGAACTCTGAGAGCTGCTAGAAGGCTGAAGAAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137321.3 |
||
| CDS CCA 72 bp | GAGGCCATAGTTCCCTTGGATCATATTTATGTCAGATaGATTGATAGGGGCTGCCAGCATCCTCACGTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: EAIVPLDHIYVR*IDRGCQHPHVD Trigger: GTCCACGTGAGGATGCTGGCAGCCCCTATCAATCCATCTGACATAAATATGATCCAAGGGAACTATGGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030742.11 ENSMUST00000137321.3 |
||
| CDS CAA 72 bp | TCAGCTCCTAGATCCTTCAGTCTGTCAGTTAGCTTCTaGATGTCGGGTCTGTCTCGGACAACGTTGATGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SAPRSFSLSVSF*MSGLSRTTLMV Trigger: GACCATCAACGTTGTCCGAGACAGACCCGACATCAAGAAGCTAACTGACAGACTGAAGGATCTAGGAGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
||
| CDS GCA 72 bp | TTGGATCATATTTATGTCAGATGGATTGATAGGGGCTaGCAGCATCCTCACGTGGACGTCAGATCCTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LDHIYVRWIDRG*QHPHVDVRSFH Trigger: GTGGAAGGATCTGACGTCCACGTGAGGATGCTGGCAGCCCCTATCAATCCATCTGACATAAATATGATCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030742.11 ENSMUST00000137321.3 |
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| CDS CCA 72 bp | TCCTTGAACTCATCTGGACTGTGGTTCTTCTTCCACTaGGACAACCAAAAGCCCCGAAGTTTGAGGTCCTTA | + |
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Preference number: 6 (lower is better) Translates to: SLNSSGLWFFFH*DNQKPRSLRSL Trigger: TAAGGACCTCAAACTTCGGGGCTTTTGGTTGTCCCAGTGGAAGAAGAACCACAGTCCAGATGAGTTCAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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| CDS TCA 72 bp | TGGTTTTTGTCTCGGGCATCCTTAGCTCTTCCTCTGTaGGGACATAATCAGCTCCTAGATCCTTCAGTCTGT | + |
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Preference number: 6 (lower is better) Translates to: WFLSRASLALPL*GHNQLLDPSVC Trigger: ACAGACTGAAGGATCTAGGAGCTGATTATGTCCTCACAGAGGAAGAGCTAAGGATGCCCGAGACAAAAACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030742.11 |
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