Pregenerated sensors for MEAF6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028863Ensembl transcript IDs: ENSMUST00000055213.11, ENSMUST00000106171.9, ENSMUST00000154689.8, ENSMUST00000184118.2, ENSMUST00000184205.8
Found 143 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGAGGGTTCCAGGGTTGGGATACTAGCATCCACACTGGGCTGAGCTaGCCAGGTGACTGCAAAGTGGCCATCCACGGCCACTCACTGAGG | + |
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Preference number: 1 (lower is better) Translates to: RGFQGWDTSIHTGLS*PGDCKVAIHGHSLR Trigger: CCTCAGTGAGTGGCCGTGGATGGCCACTTTGCAGTCACCTGGGCAGCTCAGCCCAGTGTGGATGCTAGTATCCCAACCCTGGAACCCTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR GCA 90 bp | GGTTGGGATACTAGCATCCACACTGGGCTGAGCTGCCCAGGTGACTaGAAAGTGGCCATCCACGGCCACTCACTGAGGACAGCCAAGGAC | + |
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Preference number: 1 (lower is better) Translates to: GWDTSIHTGLSCPGD*KVAIHGHSLRTAKD Trigger: GTCCTTGGCTGTCCTCAGTGAGTGGCCGTGGATGGCCACTTTGCAGTCACCTGGGCAGCTCAGCCCAGTGTGGATGCTAGTATCCCAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR CCA 90 bp | TGTGTTCCAAGCCCAACACCGAGGCATACCCGAGGGTTCCAGGGTTaGGATACTAGCATCCACACTGGGCTGAGCTGCCCAGGTGACTGC | + |
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Preference number: 1 (lower is better) Translates to: CVPSPTPRHTRGFQG*DTSIHTGLSCPGDC Trigger: GCAGTCACCTGGGCAGCTCAGCCCAGTGTGGATGCTAGTATCCCAACCCTGGAACCCTCGGGTATGCCTCGGTGTTGGGCTTGGAACACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR CCA 90 bp | AGTCTCTTAACACAGTGGCCTCCAGCAGGCTCCCAATCAACAGCCTaGACTCTGTGTTCCAAGCCCAACACCGAGGCATACCCGAGGGTT | + |
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Preference number: 1 (lower is better) Translates to: SLLTQWPPAGSQSTA*TLCSKPNTEAYPRV Trigger: AACCCTCGGGTATGCCTCGGTGTTGGGCTTGGAACACAGAGTCCAGGCTGTTGATTGGGAGCCTGCTGGAGGCCACTGTGTTAAGAGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR GCA 90 bp | ACCCACTTTGAACACTGGGTTAGACCAGCATATCCTGCACTACACTaGTGTACCCTCCCCTCACACTCTTCCATGCAAGGGCGTGTGTGC | + |
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Preference number: 1 (lower is better) Translates to: THFEHWVRPAYPALH*CTLPSHSSMQGRVC Trigger: GCACACACGCCCTTGCATGGAAGAGTGTGAGGGGAGGGTACAGCAGTGTAGTGCAGGATATGCTGGTCTAACCCAGTGTTCAAAGTGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR GCA 90 bp | GAACTACATAGGGTTGAGGCCCAAAGTGGAAACACATCCAAGATCTaGTCTTTTCCTTCCACATCCCCAGCCCTTTCCCTCGGACACCCC | + |
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Preference number: 1 (lower is better) Translates to: ELHRVEAQSGNTSKI*SFPSTSPALSLGHP Trigger: GGGGTGTCCGAGGGAAAGGGCTGGGGATGTGGAAGGAAAAGAGCAGATCTTGGATGTGTTTCCACTTTGGGCCTCAACCCTATGTAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR TCA 90 bp | GGCAGGCCAGGCTCCTGTGAGGATCTCACTCTACTCGGTGGGAACTaGGGTTCAGTAATTCTAGGCTTTTCCACTGGCTTGGCGATTTTT | + |
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Preference number: 1 (lower is better) Translates to: GRPGSCEDLTLLGGN*GSVILGFSTGLAIF Trigger: AAAAATCGCCAAGCCAGTGGAAAAGCCTAGAATTACTGAACCTCAGTTCCCACCGAGTAGAGTGAGATCCTCACAGGAGCCTGGCCTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR TCA 90 bp | ACCCCCACCATCGCACCCTGCTTCCTTTCAGACCCACAGTACGACTaGCTCCATAGAACAGTGCTCAGAATGAACCTGTGCTTCAAATCC | + |
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Preference number: 1 (lower is better) Translates to: TPTIAPCFLSDPQYD*LHRTVLRMNLCFKS Trigger: GGATTTGAAGCACAGGTTCATTCTGAGCACTGTTCTATGGAGTCAGTCGTACTGTGGGTCTGAAAGGAAGCAGGGTGCGATGGTGGGGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR CCA 90 bp | AAGTGTTTCCTGAAAGCAAACATTACAAACTCAAGTGTGGAGAAATaGTTTAACCTGTGCGGCCGTAGAACCCTTTCTCCCGGGGCCCCA | + |
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Preference number: 1 (lower is better) Translates to: KCFLKANITNSSVEK*FNLCGRRTLSPGAP Trigger: TGGGGCCCCGGGAGAAAGGGTTCTACGGCCGCACAGGTTAAACCATTTCTCCACACTTGAGTTTGTAATGTTTGCTTTCAGGAAACACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR TCA 90 bp | CTTCTAAAAGCCACTTTAGTTTCAGTTATGAATATCGACACCACATaGAACAGACGATCAGATGTGTCATCAGGAAGGTACAGGCATCAC | + |
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Preference number: 1 (lower is better) Translates to: LLKATLVSVMNIDTT*NRRSDVSSGRYRHH Trigger: GTGATGCCTGTACCTTCCTGATGACACATCTGATCGTCTGTTTCATGTGGTGTCGATATTCATAACTGAAACTAAAGTGGCTTTTAGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055213.11 ENSMUST00000154689.8 |
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| 3UTR TCA 90 bp | TACCCAGAAATAGGGAAAGCAAGTAATTTATCAAAGCCTGAGTACTaGTGTCCAGTTTACGGGAAAACTAGAAGACCCAATCAATGGCCA | + |
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Preference number: 1 (lower is better) Translates to: YPEIGKASNLSKPEY*CPVYGKTRRPNQWP Trigger: TGGCCATTGATTGGGTCTTCTAGTTTTCCCGTAAACTGGACATCAGTACTCAGGCTTTGATAAATTACTTGCTTTCCCTATTTCTGGGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTGCGGCCGTAGAACCCTTTCTCCCGGGGCCCCAAGGCTCCGGAGACCTGGGGTGTGCTGCCACTCCTaGCTCAGGAGTTGGCTAACT | + |
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Preference number: 2 (lower is better) Translates to: LCGRRTLSPGAPRLRRPGVCCHS*LRSWLT Trigger: AGTTAGCCAACTCCTGAGTCAGGAGTGGCAGCACAC...CCCAGGTCTCCGGAGCCTTGGGGCCCCGGGAGAAAGGGTTCTACGGCCGCACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR CAA 90 bp | CAGCAGCTAATGTGCTGTCCGTCCCCACCCCCACGTGCCTTTCCTTaGTCCTTCCGAGGGACAGGAGGGTCACTGGAATCAGCTGTTGCT | + |
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Preference number: 2 (lower is better) Translates to: QQLMCCPSPPPRAFP*SFRGTGGSLESAVA Trigger: AGCAACAGCTGATTCCAGTGACCCTCCTGTCCCTCGGAAGGACAAAGGAAAGGCACGTGGGGGTGGGGACGGACAGCACATTAGCTGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAGGTGTGTGCACTTCTCGATGGGGGCGGGGGTGTCACAGATGGAGCTGGTGGGAAGCTTCACAGCCTaGAAGCTTCTGCCAGCAAGT | + |
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Preference number: 2 (lower is better) Translates to: QRCVHFSMGAGVSQMELVGSFTA*KLLPAS Trigger: ACTTGCTGGCAGAAGCTTCCAGGCTGTGAAGCTTCC...CACCAGCTCCATCTGTGACACCCCCGCCCCCATCGAGAAGTGCACACACCTCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000154689.8 ENSMUST00000184205.8 |
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| 3UTR-3UTR TCA 90 bp | GACATGCTACTGCATAACACACCTTTAGGGACTGGGAGGGAACTCAGTGGTAGGGCATCCACACTGGGCTaGGCTGCCCAGGTGACTGCA | + |
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Preference number: 2 (lower is better) Translates to: DMLLHNTPLGTGRELSGRASTLG*AAQVTA Trigger: TGCAGTCACCTGGGCAGCTCAGCCCAGTGTGGATGC...CCTACCACTGAGTTCCCTCCCAGTCCCTAAAGGTGTGTTATGCAGTAGCATGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR CAA 90 bp | TTCCTTTGTCCTTCCGAGGGACAGGAGGGTCACTGGAATCAGCTGTaGCTTCTCACCCCGCTCCAACACAGGCCAGGTAATAACAGCCTA | + |
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Preference number: 2 (lower is better) Translates to: FLCPSEGQEGHWNQL*LLTPLQHRPGNNSL Trigger: TAGGCTGTTATTACCTGGCCTGTGTTGGAGCGGGGTGAGAAGCAACAGCTGATTCCAGTGACCCTCCTGTCCCTCGGAAGGACAAAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR-3UTR GCA 90 bp | CATCCAAGATCTGCTCTTTTCCTTCCACATCCCCAGCCCTTTCCCTCGGACACCCTCCTGCACCAGCAGTaGTGGGACACTGACTGTAAA | + |
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Preference number: 2 (lower is better) Translates to: HPRSALFLPHPQPFPSDTLLHQQ*WDTDCK Trigger: TTTACAGTCAGTGTCCCAGCACTGCTGGTGCAGGAG...GGTGTCCGAGGGAAAGGGCTGGGGATGTGGAAGGAAAAGAGCAGATCTTGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR-3UTR TCA 90 bp | AGGTCAGAGGGGAAGCTTCACAGCCTGGAAGCTTCTGCCAGCAAGTCTTCTAATGGACATTTGTGGCTGTaGGGTCAGAGGGGAAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: RSEGKLHSLEASASKSSNGHLWL*GQRGSF Trigger: GAAGCTTCCCCTCTGACCTCACAGCCACAAATGTCC...ATTAGAAGACTTGCTGGCAGAAGCTTCCAGGCTGTGAAGCTTCCCCTCTGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000184118.2 ENSMUST00000184205.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGGACTGGGACGGAGGACAGGTCTTCCCGCTGTTCTACTAATGATGACGACATTTACAGCCTCCATCTaGAATGGACCTTGGGTTCTA | + |
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Preference number: 2 (lower is better) Translates to: QGLGRRTGLPAVLLMMTTFTASI*NGPWVL Trigger: TAGAACCCAAGGTCCATTGCAGATGGAGGCTGTAAA...TGTCGTCATCATTAGTAGAACAGCGGGAAGACCTGTCCTCCGTCCCAGTCCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154689.8 ENSMUST00000184205.8 |
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| 3UTR-3UTR TCA 90 bp | GACATGCTACTGCATAACACACCTTTAGGGACTGGGAGGGAACTCAGTGGTAGGTCTCTCCCTTCCCCCTaGAGAAATCAAGAAGCCAAA | + |
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Preference number: 2 (lower is better) Translates to: DMLLHNTPLGTGRELSGRSLPSP*RNQEAK Trigger: TTTGGCTTCTTGATTTCTTCAGGGGGAAGGGAGAGA...CCTACCACTGAGTTCCCTCCCAGTCCCTAAAGGTGTGTTATGCAGTAGCATGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGCATATCCTGCACTACACTGCTGTACCCTCCCCTCACACTCTTCCATGCAATTTACAGCCTCCATCTaGAATGGACCTTGGGTTCTA | + |
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Preference number: 2 (lower is better) Translates to: PAYPALHCCTLPSHSSMQFTASI*NGPWVL Trigger: TAGAACCCAAGGTCCATTGCAGATGGAGGCTGTAAA...TTGCATGGAAGAGTGTGAGGGGAGGGTACAGCAGTGTAGTGCAGGATATGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR-3UTR TCA 90 bp | GACGATCAGATGTGTCATCAGGAAGGTACAGGCATCACAAAATGTCCCAAAAGAGGACATTTGTGGCTGTaGGGTCAGAGGGGAAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: DDQMCHQEGTGITKCPKRGHLWL*GQRGSF Trigger: GAAGCTTCCCCTCTGACCTCACAGCCACAAATGTCC...TCTTTTGGGACATTTTGTGATGCCTGTACCTTCCTGATGACACATCTGATCGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGATGTTTTTGAGTCGCACACTTTCCTCAGCGTTAAGGATGAAGCAATAAAAGCTGAGCTGCCCAGGTaGCTGCAAAGTGGCCATCCA | + |
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Preference number: 2 (lower is better) Translates to: PDVFESHTFLSVKDEAIKAELPR*LQSGHP Trigger: TGGATGGCCACTTTGCAGTCACCTGGGCAGCTCAGC...TTTTATTGCTTCATCCTTAACGCTGAGGAAAGTGTGCGACTCAAAAACATCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGCCCAAAGTGGAAACACATCCAAGATCTGCTCTTTTCCTTCCACATCCCCAAATGCCTTAGTGATTTaGAATCAGGCAGAGGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: EAQSGNTSKICSFPSTSPNALVI*NQAEVA Trigger: TGCCACCTCTGCCTGATTCCAAATCACTAAGGCATT...TGGGGATGTGGAAGGAAAAGAGCAGATCTTGGATGTGTTTCCACTTTGGGCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGATGTTTTTGAGTCGCACACTTTCCTCAGCGTTAAGGATGAAGCAATAAAATCTTACCCCTCAGCCTaGTCCAGTGCTATATGCTCA | + |
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Preference number: 2 (lower is better) Translates to: PDVFESHTFLSVKDEAIKSYPSA*SSAICS Trigger: TGAGCATATAGCACTGGATCAGGCTGAGGGGTAAGA...TTTTATTGCTTCATCCTTAACGCTGAGGAAAGTGTGCGACTCAAAAACATCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCAAACATTACAAACTCAAGTGTGGAGAAATGGTTTAACCTGTGCGGCCGTAGCTTTTCCACTGGCTTaGCGATTTTTAGAGCAGTAT | + |
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Preference number: 2 (lower is better) Translates to: KQTLQTQVWRNGLTCAAVAFPLA*RFLEQY Trigger: ATACTGCTCTAAAAATCGCCAAGCCAGTGGAAAAGC...TACGGCCGCACAGGTTAAACCATTTCTCCACACTTGAGTTTGTAATGTTTGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR CAA 90 bp | TTATGTGTATTACACAACATATCCAAAGTGAGGAACTACATAGGGTaGAGGCCCAAAGTGGAAACACATCCAAGATCTGCTCTTTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: LCVLHNISKVRNYIG*RPKVETHPRSALFL Trigger: AAGGAAAAGAGCAGATCTTGGATGTGTTTCCACTTTGGGCCTCAACCCTATGTAGTTCCTCACTTTGGATATGTTGTGTAATACACATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR-3UTR GCA 90 bp | CCTTCTAAAAGCCACTTTAGTTTCAGTTATGAATATCGACACCACATGAAACAGTTTACAGCCTCCATCTaGAATGGACCTTGGGTTCTA | + |
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Preference number: 2 (lower is better) Translates to: PSKSHFSFSYEYRHHMKQFTASI*NGPWVL Trigger: TAGAACCCAAGGTCCATTGCAGATGGAGGCTGTAAA...CTGTTTCATGTGGTGTCGATATTCATAACTGAAACTAAAGTGGCTTTTAGAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055213.11 ENSMUST00000154689.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCAAACATTACAAACTCAAGTGTGGAGAAATGGTTTAACCTGTGCGGCCGTAAGTTGTAAGCCAACTTaGTTGATAAAGTCAGTGTCA | + |
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Preference number: 2 (lower is better) Translates to: KQTLQTQVWRNGLTCAAVSCKPT*LIKSVS Trigger: TGACACTGACTTTATCAACCAAGTTGGCTTACAACT...TACGGCCGCACAGGTTAAACCATTTCTCCACACTTGAGTTTGTAATGTTTGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR CCA 72 bp | CACACTAGCCTTGTCCCAGTGCAGACTCCAACTCTGTaGGCCGGTCCCGCTCCCCACCTCCTCCTGCACCAG | + |
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Preference number: 3 (lower is better) Translates to: HTSLVPVQTPTL*AGPAPHLLLHQ Trigger: CTGGTGCAGGAGGAGGTGGGGAGCGGGACCGGCCCACAGAGTTGGAGTCTGCACTGGGACAAGGCTAGTGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR GCA 72 bp | GCCGGTCCCGCTCCCCACCTCCTCCTGCACCAGCAGTaGTGGGACACTGACTGTAAACAGAGTGACCCCTTC | + |
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Preference number: 3 (lower is better) Translates to: AGPAPHLLLHQQ*WDTDCKQSDPF Trigger: GAAGGGGTCACTCTGTTTACAGTCAGTGTCCCAGCACTGCTGGTGCAGGAGGAGGTGGGGAGCGGGACCGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR GCA 72 bp | GCAGCAGCTAATGTGCTGTCCGTCCCCACCCCCACGTaGCTTTCCTTTGTCCTTCCGAGGGACAGGAGGGTC | + |
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Preference number: 3 (lower is better) Translates to: AAANVLSVPTPT*LSFVLPRDRRV Trigger: GACCCTCCTGTCCCTCGGAAGGACAAAGGAAAGGCACGTGGGGGTGGGGACGGACAGCACATTAGCTGCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR GCA 72 bp | AGTGTAGTTCTTGGCCCCACACTAGCCTTGTCCCAGTaGAGACTCCAACTCTGTGGGCCGGTCCCGCTCCCC | + |
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Preference number: 3 (lower is better) Translates to: SVVLGPTLALSQ*RLQLCGPVPLP Trigger: GGGGAGCGGGACCGGCCCACAGAGTTGGAGTCTGCACTGGGACAAGGCTAGTGTGGGGCCAAGAACTACACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR CCA 72 bp | AACCCTTTCTCCCGGGGCCCCAAGGCTCCGGAGACCTaGGGCCTCACTGGGTCAGAACAGCAGCTTCGAAAA | + |
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Preference number: 3 (lower is better) Translates to: NPFSRGPKAPET*GLTGSEQQLRK Trigger: TTTTCGAAGCTGCTGTTCTGACCCAGTGAGGCCCCAGGTCTCCGGAGCCTTGGGGCCCCGGGAGAAAGGGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR GCA 72 bp | CAGGGTTGGGATACTAGCATCCACACTGGGCTGAGCTaGCCAGGTGACTGCAAAGTGGCCATCCACGGCCAC | + |
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Preference number: 3 (lower is better) Translates to: QGWDTSIHTGLS*PGDCKVAIHGH Trigger: GTGGCCGTGGATGGCCACTTTGCAGTCACCTGGGCAGCTCAGCCCAGTGTGGATGCTAGTATCCCAACCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR CCA 72 bp | AGCCCAACACCGAGGCATACCCGAGGGTTCCAGGGTTaGGATACTAGCATCCACACTGGGCTGAGCTGCCCA | + |
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Preference number: 3 (lower is better) Translates to: SPTPRHTRGFQG*DTSIHTGLSCP Trigger: TGGGCAGCTCAGCCCAGTGTGGATGCTAGTATCCCAACCCTGGAACCCTCGGGTATGCCTCGGTGTTGGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR TCA 72 bp | GGTTCCAGGGTTGGGATACTAGCATCCACACTGGGCTaGGCTGCCCAGGTGACTGCAAAGTGGCCATCCACG | + |
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Preference number: 3 (lower is better) Translates to: GSRVGILASTLG*AAQVTAKWPST Trigger: CGTGGATGGCCACTTTGCAGTCACCTGGGCAGCTCAGCCCAGTGTGGATGCTAGTATCCCAACCCTGGAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR GCA 72 bp | ACTAGCATCCACACTGGGCTGAGCTGCCCAGGTGACTaGAAAGTGGCCATCCACGGCCACTCACTGAGGACA | + |
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Preference number: 3 (lower is better) Translates to: TSIHTGLSCPGD*KVAIHGHSLRT Trigger: TGTCCTCAGTGAGTGGCCGTGGATGGCCACTTTGCAGTCACCTGGGCAGCTCAGCCCAGTGTGGATGCTAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR GCA 72 bp | ACCCTCCCCTCACACTCTTCCATGCAAGGGCGTGTGTaGGTATACACACACCCACACACCCACACAGAGCCT | + |
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Preference number: 3 (lower is better) Translates to: TLPSHSSMQGRV*VYTHPHTHTEP Trigger: AGGCTCTGTGTGGGTGTGTGGGTGTGTGTATACGCACACACGCCCTTGCATGGAAGAGTGTGAGGGGAGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR CCA 72 bp | ACACAGTGGCCTCCAGCAGGCTCCCAATCAACAGCCTaGACTCTGTGTTCCAAGCCCAACACCGAGGCATAC | + |
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Preference number: 3 (lower is better) Translates to: TQWPPAGSQSTA*TLCSKPNTEAY Trigger: GTATGCCTCGGTGTTGGGCTTGGAACACAGAGTCCAGGCTGTTGATTGGGAGCCTGCTGGAGGCCACTGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR CCA 72 bp | CCGCTCCAACACAGGCCAGGTAATAACAGCCTAGGCTaGCCTCGAACTCCTCTGCTTCCACTTCCCAAGTGC | + |
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Preference number: 3 (lower is better) Translates to: PLQHRPGNNSLG*PRTPLLPLPKC Trigger: GCACTTGGGAAGTGGAAGCAGAGGAGTTCGAGGCCAGCCTAGGCTGTTATTACCTGGCCTGTGTTGGAGCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR GCA 72 bp | CTTCCGAGGGACAGGAGGGTCACTGGAATCAGCTGTTaGTTCTCACCCCGCTCCAACACAGGCCAGGTAATA | + |
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Preference number: 3 (lower is better) Translates to: LPRDRRVTGISC*FSPRSNTGQVI Trigger: TATTACCTGGCCTGTGTTGGAGCGGGGTGAGAAGCAACAGCTGATTCCAGTGACCCTCCTGTCCCTCGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR TCA 72 bp | CAAAGACCCAGGCGTCAGAGAGGACAGGCAAGGCCCTaGATCTTACCCCTCAGCCTGATCCAGTGCTATATG | + |
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Preference number: 3 (lower is better) Translates to: QRPRRQRGQARP*ILPLSLIQCYM Trigger: CATATAGCACTGGATCAGGCTGAGGGGTAAGATTCAGGGCCTTGCCTGTCCTCTCTGACGCCTGGGTCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR GCA 72 bp | GAACACTGGGTTAGACCAGCATATCCTGCACTACACTaGTGTACCCTCCCCTCACACTCTTCCATGCAAGGG | + |
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Preference number: 3 (lower is better) Translates to: EHWVRPAYPALH*CTLPSHSSMQG Trigger: CCCTTGCATGGAAGAGTGTGAGGGGAGGGTACAGCAGTGTAGTGCAGGATATGCTGGTCTAACCCAGTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR CCA 72 bp | CTGGGTCAGAACAGCAGCTTCGAAAAGTGTAGTTCTTaGCCCCACACTAGCCTTGTCCCAGTGCAGACTCCA | + |
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Preference number: 3 (lower is better) Translates to: LGQNSSFEKCSS*PHTSLVPVQTP Trigger: TGGAGTCTGCACTGGGACAAGGCTAGTGTGGGGCCAAGAACTACACTTTTCGAAGCTGCTGTTCTGACCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR CCA 72 bp | CTGATCCAGTGCTATATGCTCAGTCTCTTAACACAGTaGCCTCCAGCAGGCTCCCAATCAACAGCCTGGACT | + |
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Preference number: 3 (lower is better) Translates to: LIQCYMLSLLTQ*PPAGSQSTAWT Trigger: AGTCCAGGCTGTTGATTGGGAGCCTGCTGGAGGCCACTGTGTTAAGAGACTGAGCATATAGCACTGGATCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR-3UTR CAA 90 bp | CATCCAAGATCTGCTCTTTTCCTTCCACATCCCCAGCCCTTTCCCTCGGACACCTCTTATAGGGAGGACTaGTCACTACAGTTAGGTCAG | + |
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Preference number: 3 (lower is better) Translates to: HPRSALFLPHPQPFPSDTSYRED*SLQLGQ Trigger: CTGACCTAACTGTAGTGACAAGTCCTCCCTATAAGA...GGTGTCCGAGGGAAAGGGCTGGGGATGTGGAAGGAAAAGAGCAGATCTTGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
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| 3UTR-3UTR CAA 90 bp | AGCATGGACCACAACGGCCCAAGTCTCCTACAAAGACCCAGGCGTCAGAGAGGAGTGCTGTTTAGCTTCTaGTTCCTCCCACATAAAACT | + |
|
Preference number: 3 (lower is better) Translates to: SMDHNGPSLLQRPRRQRGVLFSF*FLPHKT Trigger: AGTTTTATGTGGGAGGAACAAGAAGCTAAACAGCAC...TCCTCTCTGACGCCTGGGTCTTTGTAGGAGACTTGGGCCGTTGTGGTCCATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
||
| 3UTR TCA 72 bp | ATCGCACCCTGCTTCCTTTCAGACCCACAGTACGACTaGCTCCATAGAACAGTGCTCAGAATGAACCTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: IAPCFLSDPQYD*LHRTVLRMNLC Trigger: GCACAGGTTCATTCTGAGCACTGTTCTATGGAGTCAGTCGTACTGTGGGTCTGAAAGGAAGCAGGGTGCGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
||
| 3UTR GCA 72 bp | AGAGCCCTTCAGAGCCACACACCACCGGCTTACAAGTaGAGGCTCCTTAGCGTTTGTTTCCTTTATACTTCC | + |
|
Preference number: 3 (lower is better) Translates to: RALQSHTPPAYK*RLLSVCFLYTS Trigger: GGAAGTATAAAGGAAACAAACGCTAAGGAGCCTGCACTTGTAAGCCGGTGGTGTGTGGCTCTGAAGGGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
||
| 3UTR CCA 72 bp | CTTCAAATCCTGAAGCTGACCAGGCAGATCCAGACCTaGATCACCCACTTTGAACACTGGGTTAGACCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LQILKLTRQIQT*ITHFEHWVRPA Trigger: TGCTGGTCTAACCCAGTGTTCAAAGTGGGTGATCCAGGTCTGGATCTGCCTGGTCAGCTTCAGGATTTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
||
| 3UTR TCA 72 bp | GGAAAGCGTCTCGGGTTTGGGTTTAGAAGGAGCACATaGGAAGGGCGAGCCAGGGAGATTTTATTCCTACAA | + |
|
Preference number: 3 (lower is better) Translates to: GKRLGFGFRRST*EGRAREILFLQ Trigger: TTGTAGGAATAAAATCTCCCTGGCTCGCCCTTCTCATGTGCTCCTTCTAAACCCAAACCCGAGACGCTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
||
| 3UTR TCA 72 bp | CACAGTACGACTGACTCCATAGAACAGTGCTCAGAATaGACCTGTGCTTCAAATCCTGAAGCTGACCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: HSTTDSIEQCSE*TCASNPEADQA Trigger: TGCCTGGTCAGCTTCAGGATTTGAAGCACAGGTTCATTCTGAGCACTGTTCTATGGAGTCAGTCGTACTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
||
| 3UTR CCA 72 bp | ACTGACTGTAAACAGAGTGACCCCTTCCTCAGTCCTTaGAATAGTACACTTGATAGTCCCATGAAGCGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: TDCKQSDPFLSP*NSTLDSPMKRC Trigger: GCAGCGCTTCATGGGACTATCAAGTGTACTATTCCAAGGACTGAGGAAGGGGTCACTCTGTTTACAGTCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
||
| 3UTR CCA 72 bp | CTGAAAGCAAACATTACAAACTCAAGTGTGGAGAAATaGTTTAACCTGTGCGGCCGTAGAACCCTTTCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LKANITNSSVEK*FNLCGRRTLSP Trigger: GGGAGAAAGGGTTCTACGGCCGCACAGGTTAAACCATTTCTCCACACTTGAGTTTGTAATGTTTGCTTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
||
| 3UTR TCA 72 bp | TATTCAGACTGCCTTCCTTCTACCAGAACATCAGCCTaGATAGATCTGCGAGTGTGCAAATGCCTTAGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: YSDCLPSTRTSA*IDLRVCKCLSD Trigger: ATCACTAAGGCATTTGCACACTCGCAGATCTATTCAGGCTGATGTTCTGGTAGAAGGAAGGCAGTCTGAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
||
| 3UTR-3UTR CAA 90 bp | CACATGAAACAGACGATCAGATGTGTCATCAGGAAGGTACAGGCATCACAAAATCATCTGCAATGGACCTaGGGTTCTACTTTCAGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: HMKQTIRCVIRKVQASQNHLQWT*GSTFSL Trigger: TAAGCTGAAAGTAGAACCCAAGGTCCATTGCAGATG...ATTTTGTGATGCCTGTACCTTCCTGATGACACATCTGATCGTCTGTTTCATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055213.11 ENSMUST00000154689.8 |
||
| 3UTR TCA 72 bp | GCCACTTTAGTTTCAGTTATGAATATCGACACCACATaGAACAGACGATCAGATGTGTCATCAGGAAGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: ATLVSVMNIDTT*NRRSDVSSGRY Trigger: GTACCTTCCTGATGACACATCTGATCGTCTGTTTCATGTGGTGTCGATATTCATAACTGAAACTAAAGTGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055213.11 ENSMUST00000154689.8 |
||
| 3UTR TCA 72 bp | AAAAGAAATTCTCCCACAGGCATGATAGTAGTAAAATaGAGAGGAAAGCGTCTCGGGTTTGGGTTTAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: KRNSPTGMIVVK*RGKRLGFGFRR Trigger: CCTTCTAAACCCAAACCCGAGACGCTTTCCTCTTCATTTTACTACTATCATGCCTGTGGGAGAATTTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
||
| 3UTR CCA 72 bp | CACTCACTCCTTCCTTCGATGAGTTGTAAGCCAACTTaGTTGATAAAGTCAGTGTCAGCATTTATTGGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: HSLLPSMSCKPT*LIKSVSAFIGV Trigger: AACTCCAATAAATGCTGACACTGACTTTATCAACCAAGTTGGCTTACAACTCATCGAAGGAAGGAGTGAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
||
| 3UTR TCA 72 bp | ATAGGGAAAGCAAGTAATTTATCAAAGCCTGAGTACTaGTGTCCAGTTTACGGGAAAACTAGAAGACCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: IGKASNLSKPEY*CPVYGKTRRPN Trigger: ATTGGGTCTTCTAGTTTTCCCGTAAACTGGACATCAGTACTCAGGCTTTGATAAATTACTTGCTTTCCCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
||
| CDS-3UTR CCA 90 bp | AGAAATGCACAGTTAGCCACCCGCAGGGACTGGGACGGAGGACAGGTCTTCCCGCTCCCGCCGGGTGTCTaGGATCTGCGGCGGCGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: RNAQLATRRDWDGGQVFPLPPGV*DLRRRR Trigger: ACGGCGCCGCCGCAGATCCCAGACACCCGGCGGGAG...CGGGAAGACCTGTCCTCCGTCCCAGTCCCTGCGGGTGGCTAACTGTGCATTTCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154689.8 ENSMUST00000184205.8 |
||
| CDS-3UTR CCA 90 bp | GGGACATTTGTGGCTGTGAGGTCAGAGGGGAAGCTTCACAGCCTGGAAGCTTCTCTCCCGCCGGGTGTCTaGGATCTGCGGCGGCGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GTFVAVRSEGKLHSLEASLPPGV*DLRRRR Trigger: ACGGCGCCGCCGCAGATCCCAGACACCCGGCGGGAG...AGAAGCTTCCAGGCTGTGAAGCTTCCCCTCTGACCTCACAGCCACAAATGTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154689.8 ENSMUST00000184205.8 |
||
| CDS-3UTR TCA 90 bp | CACCCGCAGGGACTGGGACGGAGGACAGGTCTTCCCGCTGTTCTACTAATGATGGCTGTGGTGGCTTCCTaGGGAGGTGGAAGAGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: HPQGLGRRTGLPAVLLMMAVVAS*GGGRGG Trigger: GCCGCCTCTTCCACCTCCTCAGGAAGCCACCACAGC...CATCATTAGTAGAACAGCGGGAAGACCTGTCCTCCGTCCCAGTCCCTGCGGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154689.8 ENSMUST00000184205.8 |
||
| CDS-3UTR TCA 90 bp | CAGCTTAACACAGAATCAGAGGTGTGTGCACTTCTCGATGGGGGCGGGGGTGTCGCTGTGGTGGCTTCCTaGGGAGGTGGAAGAGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: QLNTESEVCALLDGGGGVAVVAS*GGGRGG Trigger: GCCGCCTCTTCCACCTCCTCAGGAAGCCACCACAGC...GACACCCCCGCCCCCATCGAGAAGTGCACACACCTCTGATTCTGTGTTAAGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000154689.8 ENSMUST00000184205.8 |
||
| CDS-3UTR TCA 90 bp | GGGACATTTGTGGCTGTGAGGTCAGAGGGGAAGCTTCACAGCCTGGAAGCTTCTGCTGTGGTGGCTTCCTaGGGAGGTGGAAGAGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GTFVAVRSEGKLHSLEASAVVAS*GGGRGG Trigger: GCCGCCTCTTCCACCTCCTCAGGAAGCCACCACAGC...AGAAGCTTCCAGGCTGTGAAGCTTCCCCTCTGACCTCACAGCCACAAATGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106171.9 ENSMUST00000154689.8 ENSMUST00000184118.2 ENSMUST00000184205.8 |
||
| CDS-3UTR CCA 90 bp | AGAAATGCACAGTTAGCCACCCGCAGGGACTGGGACGGAGGACAGGTCTTCCCGGGCTTCCTGAGGAGGTaGAAGAGGCGGCTTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RNAQLATRRDWDGGQVFPGFLRR*KRRLSE Trigger: CTCAGAAAGCCGCCTCTTCCACCTCCTCAGGAAGCC...CGGGAAGACCTGTCCTCCGTCCCAGTCCCTGCGGGTGGCTAACTGTGCATTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154689.8 ENSMUST00000184205.8 |
||
| 3UTR CAA 72 bp | ATGTGCTGTCCGTCCCCACCCCCACGTGCCTTTCCTTaGTCCTTCCGAGGGACAGGAGGGTCACTGGAATCA | + |
|
Preference number: 4 (lower is better) Translates to: MCCPSPPPRAFP*SFRGTGGSLES Trigger: TGATTCCAGTGACCCTCCTGTCCCTCGGAAGGACAAAGGAAAGGCACGTGGGGGTGGGGACGGACAGCACAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
||
| CDS-3UTR TCA 90 bp | GGGACATTTGTGGCTGTGAGGTCAGAGGGGAAGCTTCACAGCCTGGAAGCTTCTGCCGTTCGGCCTCCTTaGACTTCCGGTTCCTCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: GTFVAVRSEGKLHSLEASAVRPP*TSGSSG Trigger: ACCGGAGGAACCGGAAGTTCAAGGAGGCCGAACGGC...AGAAGCTTCCAGGCTGTGAAGCTTCCCCTCTGACCTCACAGCCACAAATGTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106171.9 ENSMUST00000154689.8 ENSMUST00000184118.2 ENSMUST00000184205.8 |
||
| CDS-3UTR TCA 90 bp | CACCCGCAGGGACTGGGACGGAGGACAGGTCTTCCCGCTGTTCTACTAATGATGGTTCCCTCTTTTCGATaGGCTGGTCCTGAACCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HPQGLGRRTGLPAVLLMMVPSFR*AGPEPL Trigger: CAGGGGTTCAGGACCAGCTCATCGAAAAGAGGGAAC...CATCATTAGTAGAACAGCGGGAAGACCTGTCCTCCGTCCCAGTCCCTGCGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000154689.8 ENSMUST00000184205.8 |
||
| 3UTR CAA 72 bp | CCTTCCGAGGGACAGGAGGGTCACTGGAATCAGCTGTaGCTTCTCACCCCGCTCCAACACAGGCCAGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: PSEGQEGHWNQL*LLTPLQHRPGN Trigger: ATTACCTGGCCTGTGTTGGAGCGGGGTGAGAAGCAACAGCTGATTCCAGTGACCCTCCTGTCCCTCGGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
||
| CDS-3UTR TCA 90 bp | AGGTCAGAGGGGAAGCTTCACAGCCTGGAAGCTTCTGCCAGCAAGTCTTCTAATGCCGTTCGGCCTCCTTaGACTTCCGGTTCCTCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: RSEGKLHSLEASASKSSNAVRPP*TSGSSG Trigger: ACCGGAGGAACCGGAAGTTCAAGGAGGCCGAACGGC...ATTAGAAGACTTGCTGGCAGAAGCTTCCAGGCTGTGAAGCTTCCCCTCTGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184118.2 ENSMUST00000184205.8 |
||
| CDS-3UTR TCA 90 bp | GGGACATTTGTGGCTGTGAGGTCAGAGGGGAAGCTTCACAGCCTGGAAGCTTCTAGCAGCCGACGTGACTaGGGATTTGCTGAAGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GTFVAVRSEGKLHSLEASSSRRD*GFAEEP Trigger: CGGCTCTTCAGCAAATCCTCAGTCACGTCGGCTGCT...AGAAGCTTCCAGGCTGTGAAGCTTCCCCTCTGACCTCACAGCCACAAATGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106171.9 ENSMUST00000154689.8 ENSMUST00000184118.2 ENSMUST00000184205.8 |
||
| CDS-3UTR TCA 90 bp | AGGGACATTTGTGGCTGTGAGGTCAGAGGGGAAGCTTCACAGCCTGGAAGCTTCTCGATGAGCTGGTCCTaGACCCCTGCCAAGGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: RDICGCEVRGEASQPGSFSMSWS*TPAKAL Trigger: AAGTGCCTTGGCAGGGGTTCAGGACCAGCTCATCGA...GAAGCTTCCAGGCTGTGAAGCTTCCCCTCTGACCTCACAGCCACAAATGTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000106171.9 ENSMUST00000154689.8 ENSMUST00000184118.2 ENSMUST00000184205.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGACTGGGACGGAGGACAGGTCTTCCCGCTGTTCTACTAATGATGACGACATCGATGAGCTGGTCCTaGACCCCTGCCAAGGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: QGLGRRTGLPAVLLMMTTSMSWS*TPAKAL Trigger: AAGTGCCTTGGCAGGGGTTCAGGACCAGCTCATCGA...TGTCGTCATCATTAGTAGAACAGCGGGAAGACCTGTCCTCCGTCCCAGTCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154689.8 ENSMUST00000184205.8 |
||
| CDS-3UTR TCA 90 bp | AGCATGGACCACAACGGCCCAAGTCTCCTACAAAGACCCAGGCGTCAGAGAGGAGTTCCCTCTTTTCGATaGGCTGGTCCTGAACCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SMDHNGPSLLQRPRRQRGVPSFR*AGPEPL Trigger: CAGGGGTTCAGGACCAGCTCATCGAAAAGAGGGAAC...TCCTCTCTGACGCCTGGGTCTTTGTAGGAGACTTGGGCCGTTGTGGTCCATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
||
| CDS-3UTR TCA 90 bp | GGGACATTTGTGGCTGTGAGGTCAGAGGGGAAGCTTCACAGCCTGGAAGCTTCTGAAGAGGCGGCTTTCTaGGGTTTCACTCCCTGGACG | + |
|
Preference number: 4 (lower is better) Translates to: GTFVAVRSEGKLHSLEASEEAAF*GFTPWT Trigger: CGTCCAGGGAGTGAAACCTCAGAAAGCCGCCTCTTC...AGAAGCTTCCAGGCTGTGAAGCTTCCCCTCTGACCTCACAGCCACAAATGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106171.9 ENSMUST00000154689.8 ENSMUST00000184118.2 ENSMUST00000184205.8 |
||
| CDS-3UTR TCA 90 bp | AGGGACATTTGTGGCTGTGAGGTCAGAGGGGAAGCTTCACAGCCTGGAAGCTTCGAAGAGGCGGCTTTCTaGGGTTTCACTCCCTGGACG | + |
|
Preference number: 4 (lower is better) Translates to: RDICGCEVRGEASQPGSFEEAAF*GFTPWT Trigger: CGTCCAGGGAGTGAAACCTCAGAAAGCCGCCTCTTC...GAAGCTTCCAGGCTGTGAAGCTTCCCCTCTGACCTCACAGCCACAAATGTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106171.9 ENSMUST00000154689.8 ENSMUST00000184118.2 ENSMUST00000184205.8 |
||
| CDS-3UTR TCA 90 bp | TCAGAGGGGAAGCTTCACAGCCTGGAAGCTTCTGCCAGCAAGTCTTCTAATAGTGCTGTGGTGGCTTCCTaGGGAGGTGGAAGAGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SEGKLHSLEASASKSSNSAVVAS*GGGRGG Trigger: GCCGCCTCTTCCACCTCCTCAGGAAGCCACCACAGC...ACTATTAGAAGACTTGCTGGCAGAAGCTTCCAGGCTGTGAAGCTTCCCCTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184118.2 ENSMUST00000184205.8 |
||
| CDS-3UTR GCA 90 bp | GGGACATTTGTGGCTGTGAGGTCAGAGGGGAAGCTTCACAGCCTGGAAGCTTCTGTTTCCGCCAGCTCCTaGTTCCGCTTAACCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GTFVAVRSEGKLHSLEASVSASS*FRLTSS Trigger: CGAGCTGGTTAAGCGGAAGCAGGAGCTGGCGGAAAC...AGAAGCTTCCAGGCTGTGAAGCTTCCCCTCTGACCTCACAGCCACAAATGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154689.8 ENSMUST00000184205.8 |
||
| CDS-3UTR CCA 90 bp | AGAGAATGGCAGATATTTACAGCCTCCATCTGCAATGGACCTTGGGTTCTACTTCTCCCGCCGGGTGTCTaGGATCTGCGGCGGCGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: REWQIFTASICNGPWVLLLPPGV*DLRRRR Trigger: ACGGCGCCGCCGCAGATCCCAGACACCCGGCGGGAG...AAGTAGAACCCAAGGTCCATTGCAGATGGAGGCTGTAAATATCTGCCATTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055213.11 ENSMUST00000154689.8 |
||
| CDS-3UTR CCA 90 bp | GGGACATTTGTGGCTGTGAGGTCAGAGGGGAAGCTTCACAGCCTGGAAGCTTCTGGCTTCCTGAGGAGGTaGAAGAGGCGGCTTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GTFVAVRSEGKLHSLEASGFLRR*KRRLSE Trigger: CTCAGAAAGCCGCCTCTTCCACCTCCTCAGGAAGCC...AGAAGCTTCCAGGCTGTGAAGCTTCCCCTCTGACCTCACAGCCACAAATGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106171.9 ENSMUST00000154689.8 ENSMUST00000184118.2 ENSMUST00000184205.8 |
||
| CDS-3UTR CCA 90 bp | AGGGACATTTGTGGCTGTGAGGTCAGAGGGGAAGCTTCACAGCCTGGAAGCTTCGGCTTCCTGAGGAGGTaGAAGAGGCGGCTTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RDICGCEVRGEASQPGSFGFLRR*KRRLSE Trigger: CTCAGAAAGCCGCCTCTTCCACCTCCTCAGGAAGCC...GAAGCTTCCAGGCTGTGAAGCTTCCCCTCTGACCTCACAGCCACAAATGTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106171.9 ENSMUST00000154689.8 ENSMUST00000184118.2 ENSMUST00000184205.8 |
||
| 3UTR CAA 72 bp | GCTTCGAAAAGTGTAGTTCTTGGCCCCACACTAGCCTaGTCCCAGTGCAGACTCCAACTCTGTGGGCCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ASKSVVLGPTLA*SQCRLQLCGPV Trigger: GACCGGCCCACAGAGTTGGAGTCTGCACTGGGACAAGGCTAGTGTGGGGCCAAGAACTACACTTTTCGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
||
| CDS-3UTR TCA 90 bp | TCAGAGGGGAAGCTTCACAGCCTGGAAGCTTCTGCCAGCAAGTCTTCTAATAGTGCCGTTCGGCCTCCTTaGACTTCCGGTTCCTCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SEGKLHSLEASASKSSNSAVRPP*TSGSSG Trigger: ACCGGAGGAACCGGAAGTTCAAGGAGGCCGAACGGC...ACTATTAGAAGACTTGCTGGCAGAAGCTTCCAGGCTGTGAAGCTTCCCCTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184118.2 ENSMUST00000184205.8 |
||
| CDS-3UTR TCA 90 bp | CCAGCATATCCTGCACTACACTGCTGTACCCTCCCCTCACACTCTTCCATGCAATCGATGAGCTGGTCCTaGACCCCTGCCAAGGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: PAYPALHCCTLPSHSSMQSMSWS*TPAKAL Trigger: AAGTGCCTTGGCAGGGGTTCAGGACCAGCTCATCGA...TTGCATGGAAGAGTGTGAGGGGAGGGTACAGCAGTGTAGTGCAGGATATGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
||
| CDS-3UTR TCA 90 bp | AGGGACATTTGTGGCTGTGAGGTCAGAGGGGAAGCTTCACAGCCTGGAAGCTTCGTTCCCTCTTTTCGATaGGCTGGTCCTGAACCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RDICGCEVRGEASQPGSFVPSFR*AGPEPL Trigger: CAGGGGTTCAGGACCAGCTCATCGAAAAGAGGGAAC...GAAGCTTCCAGGCTGTGAAGCTTCCCCTCTGACCTCACAGCCACAAATGTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000106171.9 ENSMUST00000154689.8 ENSMUST00000184118.2 ENSMUST00000184205.8 |
||
| CDS-3UTR TCA 90 bp | TCGACACCACATGAAACAGACGATCAGATGTGTCATCAGGAAGGTACAGGCATCGCCGTTCGGCCTCCTTaGACTTCCGGTTCCTCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: STPHETDDQMCHQEGTGIAVRPP*TSGSSG Trigger: ACCGGAGGAACCGGAAGTTCAAGGAGGCCGAACGGC...GATGCCTGTACCTTCCTGATGACACATCTGATCGTCTGTTTCATGTGGTGTCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055213.11 ENSMUST00000154689.8 |
||
| CDS-3UTR TCA 90 bp | TACTTTCAGCTTAACACAGAATCAGAGGTGTGTGCACTTCTCGATGGGGGCGGGAGCAGCCGACGTGACTaGGGATTTGCTGAAGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: YFQLNTESEVCALLDGGGSSRRD*GFAEEP Trigger: CGGCTCTTCAGCAAATCCTCAGTCACGTCGGCTGCT...CCCGCCCCCATCGAGAAGTGCACACACCTCTGATTCTGTGTTAAGCTGAAAGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055213.11 ENSMUST00000154689.8 ENSMUST00000184205.8 |
||
| CDS-3UTR TCA 90 bp | AGGTCAGAGGGGAAGCTTCACAGCCTGGAAGCTTCTGCCAGCAAGTCTTCTAATAGCAGCCGACGTGACTaGGGATTTGCTGAAGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RSEGKLHSLEASASKSSNSSRRD*GFAEEP Trigger: CGGCTCTTCAGCAAATCCTCAGTCACGTCGGCTGCT...ATTAGAAGACTTGCTGGCAGAAGCTTCCAGGCTGTGAAGCTTCCCCTCTGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184118.2 ENSMUST00000184205.8 |
||
| CDS-3UTR CCA 90 bp | GGGACATTTGTGGCTGTGAGGTCAGAGGGGAAGCTTCACAGCCTGGAAGCTTCTTTTTTGTGGCTGCTGTaGTGGCTTCCTGAGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GTFVAVRSEGKLHSLEASFLWLL*WLPEEV Trigger: CACCTCCTCAGGAAGCCACCACAGCAGCCACAAAAA...AGAAGCTTCCAGGCTGTGAAGCTTCCCCTCTGACCTCACAGCCACAAATGTCCC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000106171.9 ENSMUST00000154689.8 ENSMUST00000184118.2 ENSMUST00000184205.8 |
||
| 3UTR CAA 72 bp | GTAGTGGACACAGAAGTTACCACAAAAGGCTGTGTCTaGTCTTACACCTACCAGCGGCCAAGGGCGAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: VVDTEVTTKGCV*SYTYQRPRASA Trigger: AGCGCTCGCCCTTGGCCGCTGGTAGGTGTAAGACAAGACACAGCCTTTTGTGGTAACTTCTGTGTCCACTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
||
| CDS-3UTR TCA 90 bp | AGAGAATGGCAGATATTTACAGCCTCCATCTGCAATGGACCTTGGGTTCTACTTGCTGTGGTGGCTTCCTaGGGAGGTGGAAGAGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: REWQIFTASICNGPWVLLAVVAS*GGGRGG Trigger: GCCGCCTCTTCCACCTCCTCAGGAAGCCACCACAGC...AAGTAGAACCCAAGGTCCATTGCAGATGGAGGCTGTAAATATCTGCCATTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055213.11 ENSMUST00000154689.8 |
||
| CDS-3UTR CCA 90 bp | GGGACATTTGTGGCTGTGAGGTCAGAGGGGAAGCTTCACAGCCTGGAAGCTTCTTTCCGTCCCACTTCCTaGTTCCCTCTTTTCGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: GTFVAVRSEGKLHSLEASFRPTS*FPLFDE Trigger: CTCATCGAAAAGAGGGAACCAGGAAGTGGGACGGAA...AGAAGCTTCCAGGCTGTGAAGCTTCCCCTCTGACCTCACAGCCACAAATGTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000106171.9 ENSMUST00000154689.8 ENSMUST00000184118.2 ENSMUST00000184205.8 |
||
| CDS-3UTR CCA 90 bp | TTTCAGCTTAACACAGAATCAGAGGTGTGTGCACTTCTCGATGGGGGCGGGGGTTTTTTGTGGCTGCTGTaGTGGCTTCCTGAGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FQLNTESEVCALLDGGGGFLWLL*WLPEEV Trigger: CACCTCCTCAGGAAGCCACCACAGCAGCCACAAAAA...ACCCCCGCCCCCATCGAGAAGTGCACACACCTCTGATTCTGTGTTAAGCTGAAA 53% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000055213.11 ENSMUST00000154689.8 ENSMUST00000184205.8 |
||
| CDS-3UTR TCA 90 bp | TCAGAGGGGAAGCTTCACAGCCTGGAAGCTTCTGCCAGCAAGTCTTCTAATAGTGTTCCCTCTTTTCGATaGGCTGGTCCTGAACCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SEGKLHSLEASASKSSNSVPSFR*AGPEPL Trigger: CAGGGGTTCAGGACCAGCTCATCGAAAAGAGGGAAC...ACTATTAGAAGACTTGCTGGCAGAAGCTTCCAGGCTGTGAAGCTTCCCCTCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000184118.2 ENSMUST00000184205.8 |
||
| CDS-3UTR CCA 90 bp | TCGACACCACATGAAACAGACGATCAGATGTGTCATCAGGAAGGTACAGGCATCGGCTTCCTGAGGAGGTaGAAGAGGCGGCTTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: STPHETDDQMCHQEGTGIGFLRR*KRRLSE Trigger: CTCAGAAAGCCGCCTCTTCCACCTCCTCAGGAAGCC...GATGCCTGTACCTTCCTGATGACACATCTGATCGTCTGTTTCATGTGGTGTCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055213.11 ENSMUST00000154689.8 |
||
| CDS-3UTR CCA 90 bp | AGGTCAGAGGGGAAGCTTCACAGCCTGGAAGCTTCTGCCAGCAAGTCTTCTAATTTTTTGTGGCTGCTGTaGTGGCTTCCTGAGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RSEGKLHSLEASASKSSNFLWLL*WLPEEV Trigger: CACCTCCTCAGGAAGCCACCACAGCAGCCACAAAAA...ATTAGAAGACTTGCTGGCAGAAGCTTCCAGGCTGTGAAGCTTCCCCTCTGACCT 52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000184118.2 ENSMUST00000184205.8 |
||
| CDS-3UTR TCA 90 bp | CTGGAAGCTTCTGCCAGCAAGTCTTCTAATAGTCAGCTCGGGGCTTTTTGTTTATCGATGAGCTGGTCCTaGACCCCTGCCAAGGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: LEASASKSSNSQLGAFCLSMSWS*TPAKAL Trigger: AAGTGCCTTGGCAGGGGTTCAGGACCAGCTCATCGA...TAAACAAAAAGCCCCGAGCTGACTATTAGAAGACTTGCTGGCAGAAGCTTCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000184118.2 ENSMUST00000184205.8 |
||
| CDS-3UTR CCA 90 bp | AGGTCAGAGGGGAAGCTTCACAGCCTGGAAGCTTCTGCCAGCAAGTCTTCTAATTTCCGTCCCACTTCCTaGTTCCCTCTTTTCGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: RSEGKLHSLEASASKSSNFRPTS*FPLFDE Trigger: CTCATCGAAAAGAGGGAACCAGGAAGTGGGACGGAA...ATTAGAAGACTTGCTGGCAGAAGCTTCCAGGCTGTGAAGCTTCCCCTCTGACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000184118.2 ENSMUST00000184205.8 |
||
| CDS-3UTR TCA 90 bp | CTGGGACGGAGGACAGGTCTTCCCGCTGTTCTACTAATGATGACGACAGCAGCGCTATTGGAGTTCTTTTaGTTGGTCAAATACCGATCC | + |
|
Preference number: 4 (lower is better) Translates to: LGRRTGLPAVLLMMTTAALLEFF*LVKYRS Trigger: GGATCGGTATTTGACCAATCAAAAGAACTCCAATAG...CGCTGCTGTCGTCATCATTAGTAGAACAGCGGGAAGACCTGTCCTCCGTCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154689.8 ENSMUST00000184205.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCCAAAGCCAAAGATCAGGAAACCATCCAAGAAAATGGGAGTCTGTTTAAGGCCGTTCGGCCTCCTTaGACTTCCGGTTCCTCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: KAKAKDQETIQENGSLFKAVRPP*TSGSSG Trigger: ACCGGAGGAACCGGAAGTTCAAGGAGGCCGAACGGC...CTTAAACAGACTCCCATTTTCTTGGATGGTTTCCTGATCTTTGGCTTTGGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
||
| CDS-3UTR TCA 90 bp | AAACAAGAGAATGGCAGATATTTACAGCCTCCATCTGCAATGGACCTTGGGTTCTCGATGAGCTGGTCCTaGACCCCTGCCAAGGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: KQENGRYLQPPSAMDLGFSMSWS*TPAKAL Trigger: AAGTGCCTTGGCAGGGGTTCAGGACCAGCTCATCGA...GAACCCAAGGTCCATTGCAGATGGAGGCTGTAAATATCTGCCATTCTCTTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055213.11 ENSMUST00000154689.8 |
||
| CDS-3UTR TCA 90 bp | AGAGAATGGCAGATATTTACAGCCTCCATCTGCAATGGACCTTGGGTTCTACTTGAAGAGGCGGCTTTCTaGGGTTTCACTCCCTGGACG | + |
|
Preference number: 4 (lower is better) Translates to: REWQIFTASICNGPWVLLEEAAF*GFTPWT Trigger: CGTCCAGGGAGTGAAACCTCAGAAAGCCGCCTCTTC...AAGTAGAACCCAAGGTCCATTGCAGATGGAGGCTGTAAATATCTGCCATTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055213.11 ENSMUST00000154689.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAGGGGAAGCTTCACAGCCTGGAAGCTTCTGCCAGCAAGTCTTCTAATAGTTTCCGTCCCACTTCCTaGTTCCCTCTTTTCGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: SEGKLHSLEASASKSSNSFRPTS*FPLFDE Trigger: CTCATCGAAAAGAGGGAACCAGGAAGTGGGACGGAA...ACTATTAGAAGACTTGCTGGCAGAAGCTTCCAGGCTGTGAAGCTTCCCCTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000184118.2 ENSMUST00000184205.8 |
||
| CDS-3UTR CCA 90 bp | CAGACGATCAGATGTGTCATCAGGAAGGTACAGGCATCACAAAATGTCCCAAAAGGCTTCCTGAGGAGGTaGAAGAGGCGGCTTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QTIRCVIRKVQASQNVPKGFLRR*KRRLSE Trigger: CTCAGAAAGCCGCCTCTTCCACCTCCTCAGGAAGCC...TTTTGGGACATTTTGTGATGCCTGTACCTTCCTGATGACACATCTGATCGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055213.11 ENSMUST00000154689.8 |
||
| CDS-3UTR TCA 90 bp | AGGGACATTTGTGGCTGTGAGGTCAGAGGGGAAGCTTCACAGCCTGGAAGCTTCCTATTGGAGTTCTTTTaGTTGGTCAAATACCGATCC | + |
|
Preference number: 4 (lower is better) Translates to: RDICGCEVRGEASQPGSFLLEFF*LVKYRS Trigger: GGATCGGTATTTGACCAATCAAAAGAACTCCAATAG...GAAGCTTCCAGGCTGTGAAGCTTCCCCTCTGACCTCACAGCCACAAATGTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000106171.9 ENSMUST00000154689.8 ENSMUST00000184118.2 ENSMUST00000184205.8 |
||
| CDS-3UTR TCA 90 bp | AAGCAAACATTACAAACTCAAGTGTGGAGAAATGGTTTAACCTGTGCGGCCGTAAGCAGCCGACGTGACTaGGGATTTGCTGAAGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: KQTLQTQVWRNGLTCAAVSSRRD*GFAEEP Trigger: CGGCTCTTCAGCAAATCCTCAGTCACGTCGGCTGCT...TACGGCCGCACAGGTTAAACCATTTCTCCACACTTGAGTTTGTAATGTTTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
||
| CDS-3UTR TCA 90 bp | ACAAAACAAGAGAATGGCAGATATTTACAGCCTCCATCTGCAATGGACCTTGGGGTTCCCTCTTTTCGATaGGCTGGTCCTGAACCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TKQENGRYLQPPSAMDLGVPSFR*AGPEPL Trigger: CAGGGGTTCAGGACCAGCTCATCGAAAAGAGGGAAC...CCCAAGGTCCATTGCAGATGGAGGCTGTAAATATCTGCCATTCTCTTGTTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000055213.11 ENSMUST00000154689.8 |
||
| CDS-3UTR TCA 90 bp | ACGATCAGATGTGTCATCAGGAAGGTACAGGCATCACAAAATGTCCCAAAAGAAGAAGAGGCGGCTTTCTaGGGTTTCACTCCCTGGACG | + |
|
Preference number: 4 (lower is better) Translates to: TIRCVIRKVQASQNVPKEEEAAF*GFTPWT Trigger: CGTCCAGGGAGTGAAACCTCAGAAAGCCGCCTCTTC...TTCTTTTGGGACATTTTGTGATGCCTGTACCTTCCTGATGACACATCTGATCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055213.11 ENSMUST00000154689.8 |
||
| CDS-3UTR GCA 90 bp | AACAAAACAAGAGAATGGCAGATATTTACAGCCTCCATCTGCAATGGACCTTGGGTTTCCGCCAGCTCCTaGTTCCGCTTAACCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: NKTREWQIFTASICNGPWVSASS*FRLTSS Trigger: CGAGCTGGTTAAGCGGAAGCAGGAGCTGGCGGAAAC...CCAAGGTCCATTGCAGATGGAGGCTGTAAATATCTGCCATTCTCTTGTTTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055213.11 ENSMUST00000154689.8 |
||
| 3UTR CAA 72 bp | GTAGGGACTGCTGGCTGGCTGCACCGAAAGGCAATCTaGTCCACTAAGAATAAAGTTCCTCTGTGTAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VGTAGWLHRKAI*STKNKVPLCKQ Trigger: TTGCTTACACAGAGGAACTTTATTCTTAGTGGACAAGATTGCCTTTCGGTGCAGCCAGCCAGCAGTCCCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
||
| CDS-3UTR TCA 90 bp | TTTCAGCTTAACACAGAATCAGAGGTGTGTGCACTTCTCGATGGGGGCGGGGGTCTATTGGAGTTCTTTTaGTTGGTCAAATACCGATCC | + |
|
Preference number: 4 (lower is better) Translates to: FQLNTESEVCALLDGGGGLLEFF*LVKYRS Trigger: GGATCGGTATTTGACCAATCAAAAGAACTCCAATAG...ACCCCCGCCCCCATCGAGAAGTGCACACACCTCTGATTCTGTGTTAAGCTGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000055213.11 ENSMUST00000154689.8 ENSMUST00000184205.8 |
||
| CDS-3UTR CCA 90 bp | AGGGACATTTGTGGCTGTGAGGTCAGAGGGGAAGCTTCACAGCCTGGAAGCTTCGGTCGTTTTTGCTATTaGAGTTCTTTTGATTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RDICGCEVRGEASQPGSFGRFCY*SSFDWS Trigger: TGACCAATCAAAAGAACTCCAATAGCAAAAACGACC...GAAGCTTCCAGGCTGTGAAGCTTCCCCTCTGACCTCACAGCCACAAATGTCCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000106171.9 ENSMUST00000154689.8 ENSMUST00000184118.2 ENSMUST00000184205.8 |
||
| CDS-3UTR CCA 90 bp | AGAGAATGGCAGATATTTACAGCCTCCATCTGCAATGGACCTTGGGTTCTACTTTTTTTGTGGCTGCTGTaGTGGCTTCCTGAGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: REWQIFTASICNGPWVLLFLWLL*WLPEEV Trigger: CACCTCCTCAGGAAGCCACCACAGCAGCCACAAAAA...AAGTAGAACCCAAGGTCCATTGCAGATGGAGGCTGTAAATATCTGCCATTCTCT 48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000055213.11 ENSMUST00000154689.8 |
||
| CDS-3UTR CCA 90 bp | CAGACGATCAGATGTGTCATCAGGAAGGTACAGGCATCACAAAATGTCCCAAAATTTTTGTGGCTGCTGTaGTGGCTTCCTGAGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QTIRCVIRKVQASQNVPKFLWLL*WLPEEV Trigger: CACCTCCTCAGGAAGCCACCACAGCAGCCACAAAAA...TTTTGGGACATTTTGTGATGCCTGTACCTTCCTGATGACACATCTGATCGTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000055213.11 ENSMUST00000154689.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGAATGGCAGATATTTACAGCCTCCATCTGCAATGGACCTTGGGTTCTACTTTCCGTCCCACTTCCTaGTTCCCTCTTTTCGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: KRMADIYSLHLQWTLGSTFRPTS*FPLFDE Trigger: CTCATCGAAAAGAGGGAACCAGGAAGTGGGACGGAA...AGTAGAACCCAAGGTCCATTGCAGATGGAGGCTGTAAATATCTGCCATTCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055213.11 ENSMUST00000154689.8 |
||
| CDS-3UTR GCA 90 bp | TCGACACCACATGAAACAGACGATCAGATGTGTCATCAGGAAGGTACAGGCATCTTCAGATCAATCCTGTaGCGGTTTTTATTCTTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: STPHETDDQMCHQEGTGIFRSIL*RFLFFR Trigger: ACGGAAGAATAAAAACCGGCACAGGATTGATCTGAA...GATGCCTGTACCTTCCTGATGACACATCTGATCGTCTGTTTCATGTGGTGTCGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
||
| CDS-3UTR TCA 90 bp | CTGGAAGCTTCTGCCAGCAAGTCTTCTAATAGTCAGCTCGGGGCTTTTTGTTTACTATTGGAGTTCTTTTaGTTGGTCAAATACCGATCC | + |
|
Preference number: 4 (lower is better) Translates to: LEASASKSSNSQLGAFCLLLEFF*LVKYRS Trigger: GGATCGGTATTTGACCAATCAAAAGAACTCCAATAG...TAAACAAAAAGCCCCGAGCTGACTATTAGAAGACTTGCTGGCAGAAGCTTCCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000184118.2 ENSMUST00000184205.8 |
||
| 3UTR CAA 72 bp | TCACTCCTTCCTTCGATGAGTTGTAAGCCAACTTGGTaGATAAAGTCAGTGTCAGCATTTATTGGAGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLLPSMSCKPTW*IKSVSAFIGVG Trigger: ACCAACTCCAATAAATGCTGACACTGACTTTATCAACCAAGTTGGCTTACAACTCATCGAAGGAAGGAGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
||
| CDS-3UTR CCA 90 bp | AAACAAGAGAATGGCAGATATTTACAGCCTCCATCTGCAATGGACCTTGGGTTCGGTCGTTTTTGCTATTaGAGTTCTTTTGATTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KQENGRYLQPPSAMDLGFGRFCY*SSFDWS Trigger: TGACCAATCAAAAGAACTCCAATAGCAAAAACGACC...GAACCCAAGGTCCATTGCAGATGGAGGCTGTAAATATCTGCCATTCTCTTGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055213.11 ENSMUST00000154689.8 |
||
| CDS-3UTR TCA 90 bp | CACTTTAGTTTCAGTTATGAATATCGACACCACATGAAACAGACGATCAGATGTCTATTGGAGTTCTTTTaGTTGGTCAAATACCGATCC | + |
|
Preference number: 4 (lower is better) Translates to: HFSFSYEYRHHMKQTIRCLLEFF*LVKYRS Trigger: GGATCGGTATTTGACCAATCAAAAGAACTCCAATAG...ACATCTGATCGTCTGTTTCATGTGGTGTCGATATTCATAACTGAAACTAAAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055213.11 ENSMUST00000154689.8 |
||
| CDS-3UTR CAA 90 bp | ATCAGAGGTGTGTGCACTTCTCGATGGGGGCGGGGGTGTCACAGATGGAGCTGGAGCCGTTCGGCCTCCTaGAACTTCCGGTTCCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: IRGVCTSRWGRGCHRWSWSRSAS*NFRFLR Trigger: CCGGAGGAACCGGAAGTTCAAGGAGGCCGAACGGCT...CCAGCTCCATCTGTGACACCCCCGCCCCCATCGAGAAGTGCACACACCTCTGAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000154689.8 ENSMUST00000184205.8 |
||
| CDS-3UTR CAA 90 bp | AGGGACATTTGTGGCTGTGAGGTCAGAGGGGAAGCTTCACAGCCTGGAAGCTTCAGCCGTTCGGCCTCCTaGAACTTCCGGTTCCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RDICGCEVRGEASQPGSFSRSAS*NFRFLR Trigger: CCGGAGGAACCGGAAGTTCAAGGAGGCCGAACGGCT...GAAGCTTCCAGGCTGTGAAGCTTCCCCTCTGACCTCACAGCCACAAATGTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106171.9 ENSMUST00000154689.8 ENSMUST00000184118.2 ENSMUST00000184205.8 |
||
| CDS TCA 90 bp | CTTTCCGTCCCACTTCCTGGTTCCCTCTTTTCGATGAGCTGGTCCTaGACCCCTGCCAAGGCACTTACTGCAGCAGCCGACGTGACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LSVPLPGSLFSMSWS*TPAKALTAAADVTE Trigger: CTCAGTCACGTCGGCTGCTGCAGTAAGTGCCTTGGCAGGGGTTCAGGACCAGCTCATCGAAAAGAGGGAACCAGGAAGTGGGACGGAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000055213.11 ENSMUST00000106171.9 ENSMUST00000154689.8 ENSMUST00000184118.2 ENSMUST00000184205.8 |
||
| CDS-3UTR CAA 90 bp | CAGCTTAACACAGAATCAGAGGTGTGTGCACTTCTCGATGGGGGCGGGGGTGTCGACGTGACTGAGGATTaGCTGAAGAGCCGTTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QLNTESEVCALLDGGGGVDVTED*LKSRSA Trigger: GGCCGAACGGCTCTTCAGCAAATCCTCAGTCACGTC...GACACCCCCGCCCCCATCGAGAAGTGCACACACCTCTGATTCTGTGTTAAGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000154689.8 ENSMUST00000184205.8 |
||
| CDS-3UTR CAA 90 bp | AGGGACATTTGTGGCTGTGAGGTCAGAGGGGAAGCTTCACAGCCTGGAAGCTTCGACGTGACTGAGGATTaGCTGAAGAGCCGTTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RDICGCEVRGEASQPGSFDVTED*LKSRSA Trigger: GGCCGAACGGCTCTTCAGCAAATCCTCAGTCACGTC...GAAGCTTCCAGGCTGTGAAGCTTCCCCTCTGACCTCACAGCCACAAATGTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106171.9 ENSMUST00000154689.8 ENSMUST00000184118.2 ENSMUST00000184205.8 |
||
| CDS-3UTR CAA 90 bp | CCAGCATATCCTGCACTACACTGCTGTACCCTCCCCTCACACTCTTCCATGCAAGACGTGACTGAGGATTaGCTGAAGAGCCGTTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PAYPALHCCTLPSHSSMQDVTED*LKSRSA Trigger: GGCCGAACGGCTCTTCAGCAAATCCTCAGTCACGTC...TTGCATGGAAGAGTGTGAGGGGAGGGTACAGCAGTGTAGTGCAGGATATGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154689.8 |
||
| CDS-3UTR CAA 90 bp | AGGTCAGAGGGGAAGCTTCACAGCCTGGAAGCTTCTGCCAGCAAGTCTTCTAATGACGTGACTGAGGATTaGCTGAAGAGCCGTTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RSEGKLHSLEASASKSSNDVTED*LKSRSA Trigger: GGCCGAACGGCTCTTCAGCAAATCCTCAGTCACGTC...ATTAGAAGACTTGCTGGCAGAAGCTTCCAGGCTGTGAAGCTTCCCCTCTGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184118.2 ENSMUST00000184205.8 |
||
| CDS-3UTR CAA 90 bp | TCGACACCACATGAAACAGACGATCAGATGTGTCATCAGGAAGGTACAGGCATCGACGTGACTGAGGATTaGCTGAAGAGCCGTTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: STPHETDDQMCHQEGTGIDVTED*LKSRSA Trigger: GGCCGAACGGCTCTTCAGCAAATCCTCAGTCACGTC...GATGCCTGTACCTTCCTGATGACACATCTGATCGTCTGTTTCATGTGGTGTCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055213.11 ENSMUST00000154689.8 |
||
| CDS-3UTR CAA 90 bp | AGGTCAGAGGGGAAGCTTCACAGCCTGGAAGCTTCTGCCAGCAAGTCTTCTAATTCTGTCTCTCCAAGTTaGCAAGTGTTTCCGCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RSEGKLHSLEASASKSSNSVSPS*QVFPPA Trigger: AGCTGGCGGAAACACTTGCAAACTTGGAGAGACAGA...ATTAGAAGACTTGCTGGCAGAAGCTTCCAGGCTGTGAAGCTTCCCCTCTGACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184205.8 |
||
| CDS-3UTR CAA 90 bp | CATGAAACAGACGATCAGATGTGTCATCAGGAAGGTACAGGCATCACAAAATGTAGCCGTTCGGCCTCCTaGAACTTCCGGTTCCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: HETDDQMCHQEGTGITKCSRSAS*NFRFLR Trigger: CCGGAGGAACCGGAAGTTCAAGGAGGCCGAACGGCT...ACATTTTGTGATGCCTGTACCTTCCTGATGACACATCTGATCGTCTGTTTCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055213.11 ENSMUST00000154689.8 |
||
| CDS-3UTR CAA 90 bp | AGGGACATTTGTGGCTGTGAGGTCAGAGGGGAAGCTTCACAGCCTGGAAGCTTCGCTATTGGAGTTCTTTaGATTGGTCAAATACCGATC | + |
|
Preference number: 5 (lower is better) Translates to: RDICGCEVRGEASQPGSFAIGVL*IGQIPI Trigger: GATCGGTATTTGACCAATCAAAAGAACTCCAATAGC...GAAGCTTCCAGGCTGTGAAGCTTCCCCTCTGACCTCACAGCCACAAATGTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106171.9 ENSMUST00000154689.8 ENSMUST00000184118.2 ENSMUST00000184205.8 |
||
| CDS-3UTR CAA 90 bp | TTTCAGCTTAACACAGAATCAGAGGTGTGTGCACTTCTCGATGGGGGCGGGGGTGCTATTGGAGTTCTTTaGATTGGTCAAATACCGATC | + |
|
Preference number: 5 (lower is better) Translates to: FQLNTESEVCALLDGGGGAIGVL*IGQIPI Trigger: GATCGGTATTTGACCAATCAAAAGAACTCCAATAGC...ACCCCCGCCCCCATCGAGAAGTGCACACACCTCTGATTCTGTGTTAAGCTGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000055213.11 ENSMUST00000154689.8 ENSMUST00000184205.8 |
||
| CDS-3UTR CAA 90 bp | CCTTCTAAAAGCCACTTTAGTTTCAGTTATGAATATCGACACCACATGAAACAGTCTGTCTCTCCAAGTTaGCAAGTGTTTCCGCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PSKSHFSFSYEYRHHMKQSVSPS*QVFPPA Trigger: AGCTGGCGGAAACACTTGCAAACTTGGAGAGACAGA...CTGTTTCATGTGGTGTCGATATTCATAACTGAAACTAAAGTGGCTTTTAGAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055213.11 ENSMUST00000154689.8 |
||
| CDS-3UTR CAA 90 bp | CACTTTAGTTTCAGTTATGAATATCGACACCACATGAAACAGACGATCAGATGTTCTGTCTCTCCAAGTTaGCAAGTGTTTCCGCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: HFSFSYEYRHHMKQTIRCSVSPS*QVFPPA Trigger: AGCTGGCGGAAACACTTGCAAACTTGGAGAGACAGA...ACATCTGATCGTCTGTTTCATGTGGTGTCGATATTCATAACTGAAACTAAAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055213.11 ENSMUST00000154689.8 |
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| CDS CCA 72 bp | CCGCTTAACCAGCTCGGCCAGCTCCCGCCGGGTGTCTaGGATCTGCGGCGGCGCCGTCTTGTTGTGCATCGC | + |
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Preference number: 6 (lower is better) Translates to: PLNQLGQLPPGV*DLRRRRLVVHR Trigger: GCGATGCACAACAAGACGGCGCCGCCGCAGATCCCAGACACCCGGCGGGAGCTGGCCGAGCTGGTTAAGCGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055213.11 ENSMUST00000154689.8 ENSMUST00000184205.8 |
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| CDS GCA 72 bp | TGTCTCTCCAAGTTTGCAAGTGTTTCCGCCAGCTCCTaGTTCCGCTTAACCAGCTCGGCCAGCTCCCGCCGG | + |
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Preference number: 6 (lower is better) Translates to: CLSKFASVSASS*FRLTSSASSRR Trigger: CCGGCGGGAGCTGGCCGAGCTGGTTAAGCGGAAGCAGGAGCTGGCGGAAACACTTGCAAACTTGGAGAGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055213.11 ENSMUST00000154689.8 ENSMUST00000184205.8 |
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| CDS CAA 90 bp | ACCCCTGCCAAGGCACTTACTGCAGCAGCCGACGTGACTGAGGATTaGCTGAAGAGCCGTTCGGCCTCCTTGAACTTCCGGTTCCTCCGG | + |
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Preference number: 6 (lower is better) Translates to: TPAKALTAAADVTED*LKSRSASLNFRFLR Trigger: CCGGAGGAACCGGAAGTTCAAGGAGGCCGAACGGCTCTTCAGCAAATCCTCAGTCACGTCGGCTGCTGCAGTAAGTGCCTTGGCAGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055213.11 ENSMUST00000106171.9 ENSMUST00000154689.8 ENSMUST00000184118.2 ENSMUST00000184205.8 |
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| CDS TCA 72 bp | CCACTTCCTGGTTCCCTCTTTTCGATGAGCTGGTCCTaGACCCCTGCCAAGGCACTTACTGCAGCAGCCGAC | + |
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Preference number: 6 (lower is better) Translates to: PLPGSLFSMSWS*TPAKALTAAAD Trigger: GTCGGCTGCTGCAGTAAGTGCCTTGGCAGGGGTTCAGGACCAGCTCATCGAAAAGAGGGAACCAGGAAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000055213.11 ENSMUST00000106171.9 ENSMUST00000154689.8 ENSMUST00000184118.2 ENSMUST00000184205.8 |
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| CDS TCA 72 bp | CGCTTTCCGTCCCACTTCCTGGTTCCCTCTTTTCGATaGGCTGGTCCTGAACCCCTGCCAAGGCACTTACTG | + |
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Preference number: 6 (lower is better) Translates to: RFPSHFLVPSFR*AGPEPLPRHLL Trigger: CAGTAAGTGCCTTGGCAGGGGTTCAGGACCAGCTCATCGAAAAGAGGGAACCAGGAAGTGGGACGGAAAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000055213.11 ENSMUST00000106171.9 ENSMUST00000154689.8 ENSMUST00000184118.2 ENSMUST00000184205.8 |
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| CDS CAA 72 bp | AAGGCACTTACTGCAGCAGCCGACGTGACTGAGGATTaGCTGAAGAGCCGTTCGGCCTCCTTGAACTTCCGG | + |
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Preference number: 6 (lower is better) Translates to: KALTAAADVTED*LKSRSASLNFR Trigger: CCGGAAGTTCAAGGAGGCCGAACGGCTCTTCAGCAAATCCTCAGTCACGTCGGCTGCTGCAGTAAGTGCCTT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055213.11 ENSMUST00000106171.9 ENSMUST00000154689.8 ENSMUST00000184118.2 ENSMUST00000184205.8 |
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| CDS GCA 72 bp | TTAACTTCAGATCAATCTCAAAGTCATAATCAAACATaGCAGACGGGCTGTGCCGGTTTTTATTCTTCCGTT | + |
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Preference number: 6 (lower is better) Translates to: LTSDQSQSHNQT*QTGCAGFYSSV Trigger: AACGGAAGAATAAAAACCGGCACAGCCCGTCTGGCATGTTTGATTATGACTTTGAGATTGATCTGAAGTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106171.9 |
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