Pregenerated sensors for MEA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002768Ensembl transcript IDs: ENSMUST00000002845.8, ENSMUST00000232732.2, ENSMUST00000232762.2, ENSMUST00000233032.2, ENSMUST00000233385.2, ENSMUST00000233430.2, ENSMUST00000233491.2, ENSMUST00000233612.2, ENSMUST00000233644.2
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTAAGGTGGGCTGGGCTTGGGCCGATGTCCCCATATGTACAGAACTaGATAAAGTGGGTCTCTGAGAGGTCTGAGTCGCCTTGGTGTGAA | + |
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Preference number: 1 (lower is better) Translates to: LRWAGLGPMSPYVQN*IKWVSERSESPWCE Trigger: TTCACACCAAGGCGACTCAGACCTCTCAGAGACCCACTTTATTCAGTTCTGTACATATGGGGACATCGGCCCAAGCCCAGCCCACCTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002845.8 ENSMUST00000233430.2 |
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| 3UTR TCA 90 bp | TGTGGCTTCTGGCTGTGTACACAGGGTGCTTTATTCTCCACAGAGTaGTACATGCTAAGGTGGGCTGGGCTTGGGCCGATGTCCCCATAT | + |
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Preference number: 1 (lower is better) Translates to: CGFWLCTQGALFSTE*YMLRWAGLGPMSPY Trigger: ATATGGGGACATCGGCCCAAGCCCAGCCCACCTTAGCATGTATCACTCTGTGGAGAATAAAGCACCCTGTGTACACAGCCAGAAGCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002845.8 |
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| 3UTR CCA 90 bp | TGCTTTATTCTCCACAGAGTGATACATGCTAAGGTGGGCTGGGCTTaGGCCGATGTCCCCATATGTACAGAACTGAATAAAGTGGGTCTC | + |
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Preference number: 1 (lower is better) Translates to: CFILHRVIHAKVGWA*ADVPICTELNKVGL Trigger: GAGACCCACTTTATTCAGTTCTGTACATATGGGGACATCGGCCCAAGCCCAGCCCACCTTAGCATGTATCACTCTGTGGAGAATAAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002845.8 ENSMUST00000233430.2 |
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| 3UTR CCA 90 bp | ACAGGGTGCTTTATTCTCCACAGAGTGATACATGCTAAGGTGGGCTaGGCTTGGGCCGATGTCCCCATATGTACAGAACTGAATAAAGTG | + |
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Preference number: 1 (lower is better) Translates to: TGCFILHRVIHAKVG*AWADVPICTELNKV Trigger: CACTTTATTCAGTTCTGTACATATGGGGACATCGGCCCAAGCCCAGCCCACCTTAGCATGTATCACTCTGTGGAGAATAAAGCACCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002845.8 ENSMUST00000233430.2 |
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| 3UTR-3UTR CAA 90 bp | AGTGGGTCTCTGAGAGGTCTGAGTCGCCTTGGTGTGAAAGGGACATGGGAAGGATGTGCTGGTCCTGACTaGGAATGTAGGGAGGTAAGG | + |
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Preference number: 3 (lower is better) Translates to: SGSLRGLSRLGVKGTWEGCAGPD*ECREVR Trigger: CCTTACCTCCCTACATTCCAAGTCAGGACCAGCACA...TCCTTCCCATGTCCCTTTCACACCAAGGCGACTCAGACCTCTCAGAGACCCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
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| 3UTR TCA 72 bp | TGGCTGTGTACACAGGGTGCTTTATTCTCCACAGAGTaGTACATGCTAAGGTGGGCTGGGCTTGGGCCGATG | + |
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Preference number: 3 (lower is better) Translates to: WLCTQGALFSTE*YMLRWAGLGPM Trigger: CATCGGCCCAAGCCCAGCCCACCTTAGCATGTATCACTCTGTGGAGAATAAAGCACCCTGTGTACACAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002845.8 ENSMUST00000233430.2 |
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| 3UTR-3UTR CAA 90 bp | GCTAAGGTGGGCTGGGCTTGGGCCGATGTCCCCATATGTACAGAACTGAATAAATGTGCTGGTCCTGACTaGGAATGTAGGGAGGTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: AKVGWAWADVPICTELNKCAGPD*ECREVR Trigger: CCTTACCTCCCTACATTCCAAGTCAGGACCAGCACA...TTTATTCAGTTCTGTACATATGGGGACATCGGCCCAAGCCCAGCCCACCTTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002845.8 ENSMUST00000233430.2 |
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| 3UTR CCA 72 bp | CTCCACAGAGTGATACATGCTAAGGTGGGCTGGGCTTaGGCCGATGTCCCCATATGTACAGAACTGAATAAA | + |
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Preference number: 3 (lower is better) Translates to: LHRVIHAKVGWA*ADVPICTELNK Trigger: TTTATTCAGTTCTGTACATATGGGGACATCGGCCCAAGCCCAGCCCACCTTAGCATGTATCACTCTGTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002845.8 ENSMUST00000233430.2 |
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| 3UTR CCA 72 bp | TTTATTCTCCACAGAGTGATACATGCTAAGGTGGGCTaGGCTTGGGCCGATGTCCCCATATGTACAGAACTG | + |
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Preference number: 3 (lower is better) Translates to: FILHRVIHAKVG*AWADVPICTEL Trigger: CAGTTCTGTACATATGGGGACATCGGCCCAAGCCCAGCCCACCTTAGCATGTATCACTCTGTGGAGAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002845.8 ENSMUST00000233430.2 |
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| CDS-3UTR GCA 90 bp | AGTGGGTCTCTGAGAGGTCTGAGTCGCCTTGGTGTGAAAGGGACATGGGAAGGACAGGCAGGGGATGCCTaGCGGGCTTGGAGGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SGSLRGLSRLGVKGTWEGQAGDA*RAWRAF Trigger: GAAAGCCCTCCAAGCCCGGCAGGCATCCCCTGCCTG...TCCTTCCCATGTCCCTTTCACACCAAGGCGACTCAGACCTCTCAGAGACCCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
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| CDS-3UTR TCA 90 bp | GACATGGGAAGGAGGAGGCTGTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCCGGAGGGTCTGGCAGATaGAGCCCCAGGGCCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: DMGRRRLLRPELLVLCWSGGSGR*SPRAWI Trigger: GATCCAGGCCCTGGGGCTTCATCTGCCAGACCCTCC...GGACCAGCACAGGACTAACAACTCTGGTCTTAACAGCCTCCTCCTTCCCATGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
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| CDS-3UTR TCA 90 bp | GGGAAGGAGGAGGCTGTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCCTGACTGGAGGGTCTGGCAGATaGAGCCCCAGGGCCTGGATC | + |
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Preference number: 4 (lower is better) Translates to: GKEEAVKTRVVSPVLVLTGGSGR*SPRAWI Trigger: GATCCAGGCCCTGGGGCTTCATCTGCCAGACCCTCC...AGTCAGGACCAGCACAGGACTAACAACTCTGGTCTTAACAGCCTCCTCCTTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
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| CDS-3UTR TCA 90 bp | CATGGGAAGGAGGAGGCTGTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCCTGGGAGGGTCTGGCAGATaGAGCCCCAGGGCCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: HGKEEAVKTRVVSPVLVLGGSGR*SPRAWI Trigger: GATCCAGGCCCTGGGGCTTCATCTGCCAGACCCTCC...CAGGACCAGCACAGGACTAACAACTCTGGTCTTAACAGCCTCCTCCTTCCCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
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| CDS-3UTR GCA 90 bp | GACATGGGAAGGAGGAGGCTGTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCCCAGGCAGGGGATGCCTaGCGGGCTTGGAGGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: DMGRRRLLRPELLVLCWSQAGDA*RAWRAF Trigger: GAAAGCCCTCCAAGCCCGGCAGGCATCCCCTGCCTG...GGACCAGCACAGGACTAACAACTCTGGTCTTAACAGCCTCCTCCTTCCCATGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
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| CDS-3UTR GCA 90 bp | GGGAAGGAGGAGGCTGTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCCTGACTCAGGCAGGGGATGCCTaGCGGGCTTGGAGGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GKEEAVKTRVVSPVLVLTQAGDA*RAWRAF Trigger: GAAAGCCCTCCAAGCCCGGCAGGCATCCCCTGCCTG...AGTCAGGACCAGCACAGGACTAACAACTCTGGTCTTAACAGCCTCCTCCTTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
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| CDS-3UTR GCA 90 bp | GGACATGGGAAGGAGGAGGCTGTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCCAGGCAGGGGATGCCTaGCGGGCTTGGAGGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GHGKEEAVKTRVVSPVLVQAGDA*RAWRAF Trigger: GAAAGCCCTCCAAGCCCGGCAGGCATCCCCTGCCTG...GACCAGCACAGGACTAACAACTCTGGTCTTAACAGCCTCCTCCTTCCCATGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
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| CDS-3UTR GCA 90 bp | GACATGGGAAGGAGGAGGCTGTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCCGGCAGGAACCCCTGGTaGAGGCAGGCTTACTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DMGRRRLLRPELLVLCWSGRNPW*RQAYSS Trigger: GCTGGAGTAAGCCTGCCTGCACCAGGGGTTCCTGCC...GGACCAGCACAGGACTAACAACTCTGGTCTTAACAGCCTCCTCCTTCCCATGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
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| CDS-3UTR GCA 90 bp | GGACATGGGAAGGAGGAGGCTGTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCGGCAGGAACCCCTGGTaGAGGCAGGCTTACTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: GHGKEEAVKTRVVSPVLVGRNPW*RQAYSS Trigger: GCTGGAGTAAGCCTGCCTGCACCAGGGGTTCCTGCC...GACCAGCACAGGACTAACAACTCTGGTCTTAACAGCCTCCTCCTTCCCATGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
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| CDS-3UTR TCA 90 bp | GAGGAGGCTGTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCCTGACTTGGAATGGAGGGTCTGGCAGATaGAGCCCCAGGGCCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: EEAVKTRVVSPVLVLTWNGGSGR*SPRAWI Trigger: GATCCAGGCCCTGGGGCTTCATCTGCCAGACCCTCC...ATTCCAAGTCAGGACCAGCACAGGACTAACAACTCTGGTCTTAACAGCCTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
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| CDS-3UTR TCA 90 bp | CACAGAGTGATACATGCTAAGGTGGGCTGGGCTTGGGCCGATGTCCCCATATGTACCACATCTTCCCACTaGGCGTCCGAGATCTCCCGA | + |
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Preference number: 4 (lower is better) Translates to: HRVIHAKVGWAWADVPICTTSSH*ASEISR Trigger: TCGGGAGATCTCGGACGCTCAGTGGGAAGATGTGGT...ACATATGGGGACATCGGCCCAAGCCCAGCCCACCTTAGCATGTATCACTCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002845.8 ENSMUST00000233430.2 |
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| CDS-3UTR TCA 90 bp | AGTGGGTCTCTGAGAGGTCTGAGTCGCCTTGGTGTGAAAGGGACATGGGAAGGACCTTCTGTAGGACCCTaGTGTGGCCCTAAGTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: SGSLRGLSRLGVKGTWEGPSVGP*CGPKSS Trigger: TGAGGACTTAGGGCCACATCAGGGTCCTACAGAAGG...TCCTTCCCATGTCCCTTTCACACCAAGGCGACTCAGACCTCTCAGAGACCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
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| CDS-3UTR TCA 90 bp | CATGGGAAGGAGGAGGCTGTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCCTGACCACATCTTCCCACTaGGCGTCCGAGATCTCCCGA | + |
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Preference number: 4 (lower is better) Translates to: HGKEEAVKTRVVSPVLVLTTSSH*ASEISR Trigger: TCGGGAGATCTCGGACGCTCAGTGGGAAGATGTGGT...CAGGACCAGCACAGGACTAACAACTCTGGTCTTAACAGCCTCCTCCTTCCCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
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| CDS-3UTR TCA 90 bp | GGGAAGGAGGAGGCTGTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCCTGACTACCACATCTTCCCACTaGGCGTCCGAGATCTCCCGA | + |
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Preference number: 4 (lower is better) Translates to: GKEEAVKTRVVSPVLVLTTTSSH*ASEISR Trigger: TCGGGAGATCTCGGACGCTCAGTGGGAAGATGTGGT...AGTCAGGACCAGCACAGGACTAACAACTCTGGTCTTAACAGCCTCCTCCTTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
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| CDS-3UTR GCA 90 bp | GAGGAGGCTGTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCCTGACTTGGAATGGCAGGAACCCCTGGTaGAGGCAGGCTTACTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: EEAVKTRVVSPVLVLTWNGRNPW*RQAYSS Trigger: GCTGGAGTAAGCCTGCCTGCACCAGGGGTTCCTGCC...ATTCCAAGTCAGGACCAGCACAGGACTAACAACTCTGGTCTTAACAGCCTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
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| CDS-3UTR GCA 90 bp | GCTGTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCCTGACTTGGAATGTAGGGGGCAGGAACCCCTGGTaGAGGCAGGCTTACTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: AVKTRVVSPVLVLTWNVGGRNPW*RQAYSS Trigger: GCTGGAGTAAGCCTGCCTGCACCAGGGGTTCCTGCC...CCCTACATTCCAAGTCAGGACCAGCACAGGACTAACAACTCTGGTCTTAACAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
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| CDS-3UTR CCA 90 bp | GGGAAGGAGGAGGCTGTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCCTGACTGATGCCTGCCGGGCTTaGAGGGCTTTCTGTACCACA | + |
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Preference number: 4 (lower is better) Translates to: GKEEAVKTRVVSPVLVLTDACRA*RAFCTT Trigger: TGTGGTACAGAAAGCCCTCCAAGCCCGGCAGGCATC...AGTCAGGACCAGCACAGGACTAACAACTCTGGTCTTAACAGCCTCCTCCTTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
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| CDS-3UTR TCA 90 bp | GACATGGGAAGGAGGAGGCTGTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCCCCTTCTGTAGGACCCTaGTGTGGCCCTAAGTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: DMGRRRLLRPELLVLCWSPSVGP*CGPKSS Trigger: TGAGGACTTAGGGCCACATCAGGGTCCTACAGAAGG...GGACCAGCACAGGACTAACAACTCTGGTCTTAACAGCCTCCTCCTTCCCATGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
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| CDS-3UTR GCA 90 bp | AGTGGGTCTCTGAGAGGTCTGAGTCGCCTTGGTGTGAAAGGGACATGGGAAGGAGCTCCTGTTTCCTCCTaGTCTTCCTCGGGTTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: SGSLRGLSRLGVKGTWEGAPVSS*SSSGSS Trigger: TGAAGAACCCGAGGAAGAGCAGGAGGAAACAGGAGC...TCCTTCCCATGTCCCTTTCACACCAAGGCGACTCAGACCTCTCAGAGACCCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
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| CDS-3UTR CCA 90 bp | AGTGGGTCTCTGAGAGGTCTGAGTCGCCTTGGTGTGAAAGGGACATGGGAAGGAAGTCCTCAGTCTGATTaGGGAAGATACGCTCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: SGSLRGLSRLGVKGTWEGSPQSD*GRYAQG Trigger: GCCCTGAGCGTATCTTCCCCAATCAGACTGAGGACT...TCCTTCCCATGTCCCTTTCACACCAAGGCGACTCAGACCTCTCAGAGACCCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
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| CDS-3UTR TCA 90 bp | AAGGTGGGCTGGGCTTGGGCCGATGTCCCCATATGTACAGAACTGAATAAAGTGCCTTCTGTAGGACCCTaGTGTGGCCCTAAGTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: KVGWAWADVPICTELNKVPSVGP*CGPKSS Trigger: TGAGGACTTAGGGCCACATCAGGGTCCTACAGAAGG...CACTTTATTCAGTTCTGTACATATGGGGACATCGGCCCAAGCCCAGCCCACCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002845.8 ENSMUST00000233430.2 |
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| CDS-3UTR TCA 90 bp | CATGGGAAGGAGGAGGCTGTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCCTGTCTTGTTCAGGGTCTTaGTTGAGGGGCTGGTACGAG | + |
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Preference number: 4 (lower is better) Translates to: HGKEEAVKTRVVSPVLVLSCSGS*LRGWYE Trigger: CTCGTACCAGCCCCTCAATCAAGACCCTGAACAAGA...CAGGACCAGCACAGGACTAACAACTCTGGTCTTAACAGCCTCCTCCTTCCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
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| CDS-3UTR TCA 90 bp | GAGGAGGCTGTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCCTGACTTGGAATACCACATCTTCCCACTaGGCGTCCGAGATCTCCCGA | + |
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Preference number: 4 (lower is better) Translates to: EEAVKTRVVSPVLVLTWNTTSSH*ASEISR Trigger: TCGGGAGATCTCGGACGCTCAGTGGGAAGATGTGGT...ATTCCAAGTCAGGACCAGCACAGGACTAACAACTCTGGTCTTAACAGCCTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
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| CDS-3UTR GCA 90 bp | GGACATGGGAAGGAGGAGGCTGTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCCCTCGGGTTCTTCACTaGTCCAATCCCCAGTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: GHGKEEAVKTRVVSPVLVPRVLH*SNPQFL Trigger: AAGGAACTGGGGATTGGAGCAGTGAAGAACCCGAGG...GACCAGCACAGGACTAACAACTCTGGTCTTAACAGCCTCCTCCTTCCCATGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
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| CDS-3UTR GCA 90 bp | GGGAAGGAGGAGGCTGTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCCTGACTCCTCGGGTTCTTCACTaGTCCAATCCCCAGTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: GKEEAVKTRVVSPVLVLTPRVLH*SNPQFL Trigger: AAGGAACTGGGGATTGGAGCAGTGAAGAACCCGAGG...AGTCAGGACCAGCACAGGACTAACAACTCTGGTCTTAACAGCCTCCTCCTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
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| CDS-3UTR GCA 90 bp | AGTGGGTCTCTGAGAGGTCTGAGTCGCCTTGGTGTGAAAGGGACATGGGAAGGATCCTTCACCCACTGGTaGCAATTCCACCTCTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: SGSLRGLSRLGVKGTWEGSFTHW*QFHLFL Trigger: CAAGAAGAGGTGGAATTGGCACCAGTGGGTGAAGGA...TCCTTCCCATGTCCCTTTCACACCAAGGCGACTCAGACCTCTCAGAGACCCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
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| CDS-3UTR CCA 90 bp | AGTGGGTCTCTGAGAGGTCTGAGTCGCCTTGGTGTGAAAGGGACATGGGAAGGAATCCTCACTCTCCAATaGAGGGTCTGGCAGATGAAG | + |
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Preference number: 4 (lower is better) Translates to: SGSLRGLSRLGVKGTWEGILTLQ*RVWQMK Trigger: CTTCATCTGCCAGACCCTCCATTGGAGAGTGAGGAT...TCCTTCCCATGTCCCTTTCACACCAAGGCGACTCAGACCTCTCAGAGACCCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
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| CDS-3UTR CCA 90 bp | GAGGAGGCTGTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCCTGACTTGGAATGATGCCTGCCGGGCTTaGAGGGCTTTCTGTACCACA | + |
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Preference number: 4 (lower is better) Translates to: EEAVKTRVVSPVLVLTWNDACRA*RAFCTT Trigger: TGTGGTACAGAAAGCCCTCCAAGCCCGGCAGGCATC...ATTCCAAGTCAGGACCAGCACAGGACTAACAACTCTGGTCTTAACAGCCTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
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| CDS-3UTR TCA 90 bp | GCTGTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCCTGACTTGGAATGTAGGGCCTTCTGTAGGACCCTaGTGTGGCCCTAAGTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: AVKTRVVSPVLVLTWNVGPSVGP*CGPKSS Trigger: TGAGGACTTAGGGCCACATCAGGGTCCTACAGAAGG...CCCTACATTCCAAGTCAGGACCAGCACAGGACTAACAACTCTGGTCTTAACAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
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| CDS-3UTR GCA 90 bp | TGCTTTATTCTCCACAGAGTGATACATGCTAAGGTGGGCTGGGCTTGGGCCGATCCTCGGGTTCTTCACTaGTCCAATCCCCAGTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: CFILHRVIHAKVGWAWADPRVLH*SNPQFL Trigger: AAGGAACTGGGGATTGGAGCAGTGAAGAACCCGAGG...ATCGGCCCAAGCCCAGCCCACCTTAGCATGTATCACTCTGTGGAGAATAAAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002845.8 ENSMUST00000233430.2 |
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| CDS-3UTR GCA 90 bp | GGGAAGGAGGAGGCTGTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCCTGACTTCCTTCACCCACTGGTaGCAATTCCACCTCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GKEEAVKTRVVSPVLVLTSFTHW*QFHLFL Trigger: CAAGAAGAGGTGGAATTGGCACCAGTGGGTGAAGGA...AGTCAGGACCAGCACAGGACTAACAACTCTGGTCTTAACAGCCTCCTCCTTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
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| CDS-3UTR CCA 90 bp | GCTAAGGTGGGCTGGGCTTGGGCCGATGTCCCCATATGTACAGAACTGAATAAAAGTCCTCAGTCTGATTaGGGAAGATACGCTCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AKVGWAWADVPICTELNKSPQSD*GRYAQG Trigger: GCCCTGAGCGTATCTTCCCCAATCAGACTGAGGACT...TTTATTCAGTTCTGTACATATGGGGACATCGGCCCAAGCCCAGCCCACCTTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002845.8 ENSMUST00000233430.2 |
||
| CDS-3UTR CCA 90 bp | GGGAAGGAGGAGGCTGTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCCTGACTATCCTCACTCTCCAATaGAGGGTCTGGCAGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GKEEAVKTRVVSPVLVLTILTLQ*RVWQMK Trigger: CTTCATCTGCCAGACCCTCCATTGGAGAGTGAGGAT...AGTCAGGACCAGCACAGGACTAACAACTCTGGTCTTAACAGCCTCCTCCTTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
||
| CDS-3UTR CCA 90 bp | GGACATGGGAAGGAGGAGGCTGTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCATCCTCACTCTCCAATaGAGGGTCTGGCAGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GHGKEEAVKTRVVSPVLVILTLQ*RVWQMK Trigger: CTTCATCTGCCAGACCCTCCATTGGAGAGTGAGGAT...GACCAGCACAGGACTAACAACTCTGGTCTTAACAGCCTCCTCCTTCCCATGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
||
| CDS-3UTR GCA 90 bp | GCTGTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCCTGACTTGGAATGTAGGGCCTCGGGTTCTTCACTaGTCCAATCCCCAGTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AVKTRVVSPVLVLTWNVGPRVLH*SNPQFL Trigger: AAGGAACTGGGGATTGGAGCAGTGAAGAACCCGAGG...CCCTACATTCCAAGTCAGGACCAGCACAGGACTAACAACTCTGGTCTTAACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
||
| CDS-3UTR CCA 90 bp | GTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCCTGACTTGGAATGTAGGGAGGAGTCCTCAGTCTGATTaGGGAAGATACGCTCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VKTRVVSPVLVLTWNVGRSPQSD*GRYAQG Trigger: GCCCTGAGCGTATCTTCCCCAATCAGACTGAGGACT...CCTCCCTACATTCCAAGTCAGGACCAGCACAGGACTAACAACTCTGGTCTTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
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| CDS-3UTR CCA 90 bp | GCTGTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCCTGACTTGGAATGTAGGGAGTCCTCAGTCTGATTaGGGAAGATACGCTCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AVKTRVVSPVLVLTWNVGSPQSD*GRYAQG Trigger: GCCCTGAGCGTATCTTCCCCAATCAGACTGAGGACT...CCCTACATTCCAAGTCAGGACCAGCACAGGACTAACAACTCTGGTCTTAACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
||
| CDS-3UTR GCA 90 bp | GAGGAGGCTGTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCCTGACTTGGAATTCCTTCACCCACTGGTaGCAATTCCACCTCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EEAVKTRVVSPVLVLTWNSFTHW*QFHLFL Trigger: CAAGAAGAGGTGGAATTGGCACCAGTGGGTGAAGGA...ATTCCAAGTCAGGACCAGCACAGGACTAACAACTCTGGTCTTAACAGCCTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
||
| CDS-3UTR CCA 90 bp | GAGGAGGCTGTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCCTGACTTGGAATTTCTCCTTCACCCACTaGTGCCAATTCCACCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EEAVKTRVVSPVLVLTWNFSFTH*CQFHLF Trigger: GAAGAGGTGGAATTGGCACCAGTGGGTGAAGGAGAA...ATTCCAAGTCAGGACCAGCACAGGACTAACAACTCTGGTCTTAACAGCCTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
||
| CDS-3UTR CCA 90 bp | GTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCCTGACTTGGAATGTAGGGAGGATCCTCACTCTCCAATaGAGGGTCTGGCAGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VKTRVVSPVLVLTWNVGRILTLQ*RVWQMK Trigger: CTTCATCTGCCAGACCCTCCATTGGAGAGTGAGGAT...CCTCCCTACATTCCAAGTCAGGACCAGCACAGGACTAACAACTCTGGTCTTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
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| CDS-3UTR GCA 90 bp | CTGGCTGTGTACACAGGGTGCTTTATTCTCCACAGAGTGATACATGCTAAGGTGTCCTTCACCCACTGGTaGCAATTCCACCTCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LAVYTGCFILHRVIHAKVSFTHW*QFHLFL Trigger: CAAGAAGAGGTGGAATTGGCACCAGTGGGTGAAGGA...CACCTTAGCATGTATCACTCTGTGGAGAATAAAGCACCCTGTGTACACAGCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002845.8 |
||
| CDS TCA 90 bp | GATGCCTGCCGGGCTTGGAGGGCTTTCTGTACCACATCTTCCCACTaGGCGTCCGAGATCTCCCGAGCCCAGGCAGGAACCCCTGGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: DACRAWRAFCTTSSH*ASEISRAQAGTPGA Trigger: TGCACCAGGGGTTCCTGCCTGGGCTCGGGAGATCTCGGACGCTCAGTGGGAAGATGTGGTACAGAAAGCCCTCCAAGCCCGGCAGGCATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233385.2 ENSMUST00000233430.2 ENSMUST00000233491.2 ENSMUST00000233612.2 |
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| CDS GCA 90 bp | CCACTGAGCGTCCGAGATCTCCCGAGCCCAGGCAGGAACCCCTGGTaGAGGCAGGCTTACTCCAGCCATCGTCCTTTTCACCAGCTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: PLSVRDLPSPGRNPW*RQAYSSHRPFHQLY Trigger: GTAGAGCTGGTGAAAAGGACGATGGCTGGAGTAAGCCTGCCTGCACCAGGGGTTCCTGCCTGGGCTCGGGAGATCTCGGACGCTCAGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233385.2 ENSMUST00000233430.2 ENSMUST00000233491.2 ENSMUST00000233612.2 |
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| CDS-3UTR CAA 90 bp | AGTGGGTCTCTGAGAGGTCTGAGTCGCCTTGGTGTGAAAGGGACATGGGAAGGAGGATGCCTGCCGGGCTaGGAGGGCTTTCTGTACCAC | + |
|
Preference number: 5 (lower is better) Translates to: SGSLRGLSRLGVKGTWEGGCLPG*EGFLYH Trigger: GTGGTACAGAAAGCCCTCCAAGCCCGGCAGGCATCC...TCCTTCCCATGTCCCTTTCACACCAAGGCGACTCAGACCTCTCAGAGACCCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
||
| CDS-3UTR CAA 90 bp | GGACATGGGAAGGAGGAGGCTGTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCGGATGCCTGCCGGGCTaGGAGGGCTTTCTGTACCAC | + |
|
Preference number: 5 (lower is better) Translates to: GHGKEEAVKTRVVSPVLVGCLPG*EGFLYH Trigger: GTGGTACAGAAAGCCCTCCAAGCCCGGCAGGCATCC...GACCAGCACAGGACTAACAACTCTGGTCTTAACAGCCTCCTCCTTCCCATGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
||
| CDS GCA 90 bp | CTCTACATGTTCTGGGTCCATGGGGATAGAGCTGTGGCTGCTCAATaGGGCGGCTCCCTCCTCATCTTCATCCTCACTCTCCAATGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LYMFWVHGDRAVAAQ*GGSLLIFILTLQWR Trigger: CCTCCATTGGAGAGTGAGGATGAAGATGAGGAGGGAGCCGCCGCATTGAGCAGCCACAGCTCTATCCCCATGGACCCAGAACATGTAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233385.2 ENSMUST00000233430.2 ENSMUST00000233491.2 ENSMUST00000233612.2 |
||
| CDS-3UTR CAA 90 bp | AGTGGGTCTCTGAGAGGTCTGAGTCGCCTTGGTGTGAAAGGGACATGGGAAGGAGGCCTGGATCCGATCTaGGATGTCAGCAGCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: SGSLRGLSRLGVKGTWEGGLDPI*DVSSSI Trigger: GATGGAGCTGCTGACATCCAAGATCGGATCCAGGCC...TCCTTCCCATGTCCCTTTCACACCAAGGCGACTCAGACCTCTCAGAGACCCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
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| CDS GCA 90 bp | TGTTTTTGTACCTGGGTCCATGGGGATAGAGCTGTGGCTGCTCAATaGGGCGGCTCCCTCCTCATCTTCATCCTCACTCTCCAATGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CFCTWVHGDRAVAAQ*GGSLLIFILTLQWR Trigger: CCTCCATTGGAGAGTGAGGATGAAGATGAGGAGGGAGCCGCCGCATTGAGCAGCCACAGCTCTATCCCCATGGACCCAGGTACAAAAACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233032.2 |
||
| CDS-3UTR CAA 90 bp | GACATGGGAAGGAGGAGGCTGTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCCGGCCTGGATCCGATCTaGGATGTCAGCAGCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: DMGRRRLLRPELLVLCWSGLDPI*DVSSSI Trigger: GATGGAGCTGCTGACATCCAAGATCGGATCCAGGCC...GGACCAGCACAGGACTAACAACTCTGGTCTTAACAGCCTCCTCCTTCCCATGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
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| CDS-3UTR CAA 90 bp | GTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCCTGACTTGGAATGTAGGGAGGGGATGCCTGCCGGGCTaGGAGGGCTTTCTGTACCAC | + |
|
Preference number: 5 (lower is better) Translates to: VKTRVVSPVLVLTWNVGRGCLPG*EGFLYH Trigger: GTGGTACAGAAAGCCCTCCAAGCCCGGCAGGCATCC...CCTCCCTACATTCCAAGTCAGGACCAGCACAGGACTAACAACTCTGGTCTTAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
||
| CDS-3UTR CAA 90 bp | GCTGTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCCTGACTTGGAATGTAGGGGGATGCCTGCCGGGCTaGGAGGGCTTTCTGTACCAC | + |
|
Preference number: 5 (lower is better) Translates to: AVKTRVVSPVLVLTWNVGGCLPG*EGFLYH Trigger: GTGGTACAGAAAGCCCTCCAAGCCCGGCAGGCATCC...CCCTACATTCCAAGTCAGGACCAGCACAGGACTAACAACTCTGGTCTTAACAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
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| CDS-3UTR CAA 90 bp | CTGGCTGTGTACACAGGGTGCTTTATTCTCCACAGAGTGATACATGCTAAGGTGGGATGCCTGCCGGGCTaGGAGGGCTTTCTGTACCAC | + |
|
Preference number: 5 (lower is better) Translates to: LAVYTGCFILHRVIHAKVGCLPG*EGFLYH Trigger: GTGGTACAGAAAGCCCTCCAAGCCCGGCAGGCATCC...CACCTTAGCATGTATCACTCTGTGGAGAATAAAGCACCCTGTGTACACAGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002845.8 |
||
| CDS-3UTR CAA 90 bp | AGTGGGTCTCTGAGAGGTCTGAGTCGCCTTGGTGTGAAAGGGACATGGGAAGGATTCTTGTTCAGGGTCTaGATTGAGGGGCTGGTACGA | + |
|
Preference number: 5 (lower is better) Translates to: SGSLRGLSRLGVKGTWEGFLFRV*IEGLVR Trigger: TCGTACCAGCCCCTCAATCAAGACCCTGAACAAGAA...TCCTTCCCATGTCCCTTTCACACCAAGGCGACTCAGACCTCTCAGAGACCCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
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| CDS-3UTR CAA 90 bp | GCTGTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCCTGACTTGGAATGTAGGGGGCCTGGATCCGATCTaGGATGTCAGCAGCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: AVKTRVVSPVLVLTWNVGGLDPI*DVSSSI Trigger: GATGGAGCTGCTGACATCCAAGATCGGATCCAGGCC...CCCTACATTCCAAGTCAGGACCAGCACAGGACTAACAACTCTGGTCTTAACAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
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| CDS-3UTR CAA 90 bp | GAGGAGGCTGTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCCTGACTTGGAATGGCCTGGATCCGATCTaGGATGTCAGCAGCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: EEAVKTRVVSPVLVLTWNGLDPI*DVSSSI Trigger: GATGGAGCTGCTGACATCCAAGATCGGATCCAGGCC...ATTCCAAGTCAGGACCAGCACAGGACTAACAACTCTGGTCTTAACAGCCTCCTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
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| CDS-3UTR CAA 90 bp | CATGGGAAGGAGGAGGCTGTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCCTGTTCTTGTTCAGGGTCTaGATTGAGGGGCTGGTACGA | + |
|
Preference number: 5 (lower is better) Translates to: HGKEEAVKTRVVSPVLVLFLFRV*IEGLVR Trigger: TCGTACCAGCCCCTCAATCAAGACCCTGAACAAGAA...CAGGACCAGCACAGGACTAACAACTCTGGTCTTAACAGCCTCCTCCTTCCCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
||
| CDS-3UTR CAA 90 bp | GGACATGGGAAGGAGGAGGCTGTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCTTCTTGTTCAGGGTCTaGATTGAGGGGCTGGTACGA | + |
|
Preference number: 5 (lower is better) Translates to: GHGKEEAVKTRVVSPVLVFLFRV*IEGLVR Trigger: TCGTACCAGCCCCTCAATCAAGACCCTGAACAAGAA...GACCAGCACAGGACTAACAACTCTGGTCTTAACAGCCTCCTCCTTCCCATGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
||
| CDS-3UTR CAA 90 bp | GTTAAGACCAGAGTTGTTAGTCCTGTGCTGGTCCTGACTTGGAATGTAGGGAGGTTCTTGTTCAGGGTCTaGATTGAGGGGCTGGTACGA | + |
|
Preference number: 5 (lower is better) Translates to: VKTRVVSPVLVLTWNVGRFLFRV*IEGLVR Trigger: TCGTACCAGCCCCTCAATCAAGACCCTGAACAAGAA...CCTCCCTACATTCCAAGTCAGGACCAGCACAGGACTAACAACTCTGGTCTTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233430.2 ENSMUST00000233612.2 |
||
| CDS-3UTR CAA 90 bp | AAGGTGGGCTGGGCTTGGGCCGATGTCCCCATATGTACAGAACTGAATAAAGTGCAATTCCACCTCTTCTaGTTCAGGGTCTTGATTGAG | + |
|
Preference number: 5 (lower is better) Translates to: KVGWAWADVPICTELNKVQFHLF*FRVLIE Trigger: CTCAATCAAGACCCTGAACAAGAAGAGGTGGAATTG...CACTTTATTCAGTTCTGTACATATGGGGACATCGGCCCAAGCCCAGCCCACCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002845.8 ENSMUST00000233430.2 |
||
| CDS TCA 72 bp | CGGGCTTGGAGGGCTTTCTGTACCACATCTTCCCACTaGGCGTCCGAGATCTCCCGAGCCCAGGCAGGAACC | + |
|
Preference number: 6 (lower is better) Translates to: RAWRAFCTTSSH*ASEISRAQAGT Trigger: GGTTCCTGCCTGGGCTCGGGAGATCTCGGACGCTCAGTGGGAAGATGTGGTACAGAAAGCCCTCCAAGCCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233385.2 ENSMUST00000233430.2 ENSMUST00000233491.2 ENSMUST00000233612.2 |
||
| CDS GCA 72 bp | ACCTGGGTCCATGGGGATAGAGCTGTGGCTGCTCAATaGGGCGGCTCCCTCCTCATCTTCATCCTCACTCTC | + |
|
Preference number: 6 (lower is better) Translates to: TWVHGDRAVAAQ*GGSLLIFILTL Trigger: GAGAGTGAGGATGAAGATGAGGAGGGAGCCGCCGCATTGAGCAGCCACAGCTCTATCCCCATGGACCCAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233032.2 |
||
| CDS GCA 72 bp | TTCTGGGTCCATGGGGATAGAGCTGTGGCTGCTCAATaGGGCGGCTCCCTCCTCATCTTCATCCTCACTCTC | + |
|
Preference number: 6 (lower is better) Translates to: FWVHGDRAVAAQ*GGSLLIFILTL Trigger: GAGAGTGAGGATGAAGATGAGGAGGGAGCCGCCGCATTGAGCAGCCACAGCTCTATCCCCATGGACCCAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233385.2 ENSMUST00000233430.2 ENSMUST00000233491.2 ENSMUST00000233612.2 |
||
| CDS CAA 90 bp | TCCTTCACCCACTGGTGCCAATTCCACCTCTTCTTGTTCAGGGTCTaGATTGAGGGGCTGGTACGAGTAGCCTGCTGGGCCTGCTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: SFTHWCQFHLFLFRV*IEGLVRVACWACSC Trigger: ACAGGAGCAGGCCCAGCAGGCTACTCGTACCAGCCCCTCAATCAAGACCCTGAACAAGAAGAGGTGGAATTGGCACCAGTGGGTGAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233032.2 ENSMUST00000233385.2 ENSMUST00000233430.2 ENSMUST00000233491.2 ENSMUST00000233612.2 |
||
| CDS CCA 72 bp | AGCTCTACATGTTCTGGGTCCATGGGGATAGAGCTGTaGCTGCTCAATGCGGCGGCTCCCTCCTCATCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSTCSGSMGIEL*LLNAAAPSSSS Trigger: TGAAGATGAGGAGGGAGCCGCCGCATTGAGCAGCCACAGCTCTATCCCCATGGACCCAGAACATGTAGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233385.2 ENSMUST00000233430.2 ENSMUST00000233491.2 ENSMUST00000233612.2 |
||
| CDS CAA 72 bp | CACTGGTGCCAATTCCACCTCTTCTTGTTCAGGGTCTaGATTGAGGGGCTGGTACGAGTAGCCTGCTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: HWCQFHLFLFRV*IEGLVRVACWA Trigger: GGCCCAGCAGGCTACTCGTACCAGCCCCTCAATCAAGACCCTGAACAAGAAGAGGTGGAATTGGCACCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233032.2 ENSMUST00000233385.2 ENSMUST00000233430.2 ENSMUST00000233491.2 ENSMUST00000233612.2 ENSMUST00000233644.2 |
||
| CDS CCA 72 bp | GTTGTTTTTGTACCTGGGTCCATGGGGATAGAGCTGTaGCTGCTCAATGCGGCGGCTCCCTCCTCATCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: VVFVPGSMGIEL*LLNAAAPSSSS Trigger: TGAAGATGAGGAGGGAGCCGCCGCATTGAGCAGCCACAGCTCTATCCCCATGGACCCAGGTACAAAAACAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233032.2 |
||
| CDS CAA 90 bp | AGCTCCATCTTCTCCTTCACCCACTGGTGCCAATTCCACCTCTTCTaGTTCAGGGTCTTGATTGAGGGGCTGGTACGAGTAGCCTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SSIFSFTHWCQFHLF*FRVLIEGLVRVACW Trigger: CCAGCAGGCTACTCGTACCAGCCCCTCAATCAAGACCCTGAACAAGAAGAGGTGGAATTGGCACCAGTGGGTGAAGGAGAAGATGGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233032.2 ENSMUST00000233385.2 ENSMUST00000233430.2 ENSMUST00000233491.2 ENSMUST00000233612.2 |
||
| CDS CAA 72 bp | TTCTCCTTCACCCACTGGTGCCAATTCCACCTCTTCTaGTTCAGGGTCTTGATTGAGGGGCTGGTACGAGTA | + |
|
Preference number: 6 (lower is better) Translates to: FSFTHWCQFHLF*FRVLIEGLVRV Trigger: TACTCGTACCAGCCCCTCAATCAAGACCCTGAACAAGAAGAGGTGGAATTGGCACCAGTGGGTGAAGGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000002845.8 ENSMUST00000232732.2 ENSMUST00000232762.2 ENSMUST00000233032.2 ENSMUST00000233385.2 ENSMUST00000233430.2 ENSMUST00000233491.2 ENSMUST00000233612.2 |
||