Pregenerated sensors for ME1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032418Ensembl transcript IDs: ENSMUST00000034989.15, ENSMUST00000185374.2
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTCTGGGAACCACTGTCTGGCATCTGACTCCCTTGTCTCAGAGGTaGGTTCCCAGGGCCCCGTCTCAAGGACCCTCCTGCAGCCCTTCT | + |
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Preference number: 1 (lower is better) Translates to: CLGTTVWHLTPLSQR*VPRAPSQGPSCSPS Trigger: AGAAGGGCTGCAGGAGGGTCCTTGAGACGGGGCCCTGGGAACCCACCTCTGAGACAAGGGAGTCAGATGCCAGACAGTGGTTCCCAGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| 3UTR TCA 90 bp | ATCTTCATGGAGCCTGAGCTTGTCTGGGAACCACTGTCTGGCATCTaGCTCCCTTGTCTCAGAGGTGGGTTCCCAGGGCCCCGTCTCAAG | + |
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Preference number: 1 (lower is better) Translates to: IFMEPELVWEPLSGI*LPCLRGGFPGPRLK Trigger: CTTGAGACGGGGCCCTGGGAACCCACCTCTGAGACAAGGGAGTCAGATGCCAGACAGTGGTTCCCAGACAAGCTCAGGCTCCATGAAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| 3UTR GCA 90 bp | GCTACACTAACAAAAACACCCGAGTATCTCAGCAGGGCCAGGGGTTaGTCAGAGATGAGAAAGGGTGTTTCTATGGAGTGTTTGGGAACG | + |
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Preference number: 1 (lower is better) Translates to: ATLTKTPEYLSRARG*SEMRKGVSMECLGT Trigger: CGTTCCCAAACACTCCATAGAAACACCCTTTCTCATCTCTGAGCAACCCCTGGCCCTGCTGAGATACTCGGGTGTTTTTGTTAGTGTAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| 3UTR TCA 90 bp | GCTACGCAGGGTACTGTAAACAGCAGTGAGCTTTCTCAGAGGTGTTaGGTCAGGTGTACAAAGAGAACAAAGCTAACGGAGGCCTGGAAT | + |
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Preference number: 1 (lower is better) Translates to: ATQGTVNSSELSQRC*VRCTKRTKLTEAWN Trigger: ATTCCAGGCCTCCGTTAGCTTTGTTCTCTTTGTACACCTGACTCAACACCTCTGAGAAAGCTCACTGCTGTTTACAGTACCCTGCGTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAGAGGTGGGTTCCCAGGGCCCCGTCTCAAGGACCCTCCTGCAGCCCTTCTCGAAAGGGTGTTTCTATaGAGTGTTTGGGAACGAGAG | + |
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Preference number: 2 (lower is better) Translates to: LRGGFPGPRLKDPPAALLERVFL*SVWERE Trigger: CTCTCGTTCCCAAACACTCCATAGAAACACCCTTTC...GAGAAGGGCTGCAGGAGGGTCCTTGAGACGGGGCCCTGGGAACCCACCTCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGCTGCCCGCCGCAAACCCACACAGGCTTTAAAGCAACTTCAAAGTCAGGAGAGCAGGGCCAGGGGTTaGTCAGAGATGAGAAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: RAARRKPTQALKQLQSQESRARG*SEMRKG Trigger: ACCCTTTCTCATCTCTGAGCAACCCCTGGCCCTGCT...CTCCTGACTTTGAAGTTGCTTTAAAGCCTGTGTGGGTTTGCGGCGGGCAGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGCTGCCCGCCGCAAACCCACACAGGCTTTAAAGCAACTTCAAAGTCAGGAGGAGCCTGAGCTTGTCTaGGAACCACTGTCTGGCATC | + |
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Preference number: 2 (lower is better) Translates to: RAARRKPTQALKQLQSQEEPELV*EPLSGI Trigger: GATGCCAGACAGTGGTTCCCAGACAAGCTCAGGCTC...CTCCTGACTTTGAAGTTGCTTTAAAGCCTGTGTGGGTTTGCGGCGGGCAGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| 3UTR-3UTR TCA 90 bp | TCACTGTACAGAGCTGCCCGCCGCAAACCCACACAGGCTTTAAAGCAACTTCAACCACTGTCTGGCATCTaGCTCCCTTGTCTCAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: SLYRAARRKPTQALKQLQPLSGI*LPCLRG Trigger: ACCTCTGAGACAAGGGAGTCAGATGCCAGACAGTGG...TTGAAGTTGCTTTAAAGCCTGTGTGGGTTTGCGGCGGGCAGCTCTGTACAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGCTGCCCGCCGCAAACCCACACAGGCTTTAAAGCAACTTCAAAGTCAGGAGCTTCCTACATATCAGTaGGGACTTTCTCAGCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: RAARRKPTQALKQLQSQELPTYQ*GLSQQQ Trigger: CTGCTGCTGAGAAAGTCCTCACTGATATGTAGGAAG...CTCCTGACTTTGAAGTTGCTTTAAAGCCTGTGTGGGTTTGCGGCGGGCAGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| 3UTR-3UTR TCA 90 bp | TCACTGTACAGAGCTGCCCGCCGCAAACCCACACAGGCTTTAAAGCAACTTCAAGGGGTTGCTCAGAGATaGGAAAGGGTGTTTCTATGG | + |
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Preference number: 2 (lower is better) Translates to: SLYRAARRKPTQALKQLQGVAQR*ERVFLW Trigger: CCATAGAAACACCCTTTCTCATCTCTGAGCAACCCC...TTGAAGTTGCTTTAAAGCCTGTGTGGGTTTGCGGCGGGCAGCTCTGTACAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| 3UTR-3UTR TCA 90 bp | TCACTGTACAGAGCTGCCCGCCGCAAACCCACACAGGCTTTAAAGCAACTTCAACTTCCTACATATCAGTaGGGACTTTCTCAGCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: SLYRAARRKPTQALKQLQLPTYQ*GLSQQQ Trigger: CTGCTGCTGAGAAAGTCCTCACTGATATGTAGGAAG...TTGAAGTTGCTTTAAAGCCTGTGTGGGTTTGCGGCGGGCAGCTCTGTACAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| 3UTR-3UTR TCA 90 bp | CTCAAGGACCCTCCTGCAGCCCTTCTCACTGCCCAGGCTACACTAACAAAAACACTTTCTCAGAGGTGTTaGGTCAGGTGTACAAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: LKDPPAALLTAQATLTKTLSQRC*VRCTKR Trigger: TCTCTTTGTACACCTGACTCAACACCTCTGAGAAAG...TGTTTTTGTTAGTGTAGCCTGGGCAGTGAGAAGGGCTGCAGGAGGGTCCTTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAAGGACCCTCCTGCAGCCCTTCTCACTGCCCAGGCTACACTAACAAAAACAGAAAGGGTGTTTCTATaGAGTGTTTGGGAACGAGAG | + |
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Preference number: 2 (lower is better) Translates to: LKDPPAALLTAQATLTKTERVFL*SVWERE Trigger: CTCTCGTTCCCAAACACTCCATAGAAACACCCTTTC...TGTTTTTGTTAGTGTAGCCTGGGCAGTGAGAAGGGCTGCAGGAGGGTCCTTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| 3UTR-3UTR GCA 90 bp | ATGTTCTTGAACCTGAGCTTAGGAGTTAAGGCTGTTTCTAGTCATGCCATTATCTCTCAAGGACCCTCCTaGAGCCCTTCTCACTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: MFLNLSLGVKAVSSHAIISQGPS*SPSHCP Trigger: TGGGCAGTGAGAAGGGCTGCAGGAGGGTCCTTGAGA...GATAATGGCATGACTAGAAACAGCCTTAACTCCTAAGCTCAGGTTCAAGAACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTTCTTGAACCTGAGCTTAGGAGTTAAGGCTGTTTCTAGTCATGCCATTATCGAGCCTGAGCTTGTCTaGGAACCACTGTCTGGCATC | + |
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Preference number: 2 (lower is better) Translates to: MFLNLSLGVKAVSSHAIIEPELV*EPLSGI Trigger: GATGCCAGACAGTGGTTCCCAGACAAGCTCAGGCTC...GATAATGGCATGACTAGAAACAGCCTTAACTCCTAAGCTCAGGTTCAAGAACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTTCTTGAACCTGAGCTTAGGAGTTAAGGCTGTTTCTAGTCATGCCATTATCCTTTCTCAGAGGTGTTaGGTCAGGTGTACAAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: MFLNLSLGVKAVSSHAIILSQRC*VRCTKR Trigger: TCTCTTTGTACACCTGACTCAACACCTCTGAGAAAG...GATAATGGCATGACTAGAAACAGCCTTAACTCCTAAGCTCAGGTTCAAGAACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGTTAAGGCTGTTTCTAGTCATGCCATTATCAACGTGTCCAGTAAATTAATAAAGCTAACGGAGGCCTaGAATAAAAGTCCTGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: GVKAVSSHAIINVSSKLIKLTEA*NKSPEK Trigger: CTTCTCAGGACTTTTATTCCAGGCCTCCGTTAGCTT...TATTAATTTACTGGACACGTTGATAATGGCATGACTAGAAACAGCCTTAACTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| 3UTR CAA 90 bp | GAATCTTTCTCAAATAACTACACTGAAGAAACCGTTAGTCACAAGTaGTCATTAGGAAGTCTGTACCCTTTTAGCTCACACCTGAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: ESFSNNYTEETVSHK*SLGSLYPFSSHLKA Trigger: AGCTTTCAGGTGTGAGCTAAAAGGGTACAGACTTCCTAATGACAACTTGTGACTAACGGTTTCTTCAGTGTAGTTATTTGAGAAAGATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| 3UTR TCA 72 bp | GAGCCTGAGCTTGTCTGGGAACCACTGTCTGGCATCTaGCTCCCTTGTCTCAGAGGTGGGTTCCCAGGGCCC | + |
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Preference number: 3 (lower is better) Translates to: EPELVWEPLSGI*LPCLRGGFPGP Trigger: GGGCCCTGGGAACCCACCTCTGAGACAAGGGAGTCAGATGCCAGACAGTGGTTCCCAGACAAGCTCAGGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| 3UTR GCA 72 bp | AGGTGGGTTCCCAGGGCCCCGTCTCAAGGACCCTCCTaGAGCCCTTCTCACTGCCCAGGCTACACTAACAAA | + |
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Preference number: 3 (lower is better) Translates to: RWVPRAPSQGPS*SPSHCPGYTNK Trigger: TTTGTTAGTGTAGCCTGGGCAGTGAGAAGGGCTGCAGGAGGGTCCTTGAGACGGGGCCCTGGGAACCCACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| 3UTR-3UTR CAA 90 bp | TCAAGGAGCTCACTGTACAGAGCTGCCCGCCGCAAACCCACACAGGCTTTAAAGTGGCATCTGACTCCCTaGTCTCAGAGGTGGGTTCCC | + |
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Preference number: 3 (lower is better) Translates to: SRSSLYRAARRKPTQALKWHLTP*SQRWVP Trigger: GGGAACCCACCTCTGAGACAAGGGAGTCAGATGCCA...CTTTAAAGCCTGTGTGGGTTTGCGGCGGGCAGCTCTGTACAGTGAGCTCCTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| 3UTR GCA 72 bp | GCCCCGTCTCAAGGACCCTCCTGCAGCCCTTCTCACTaGCCAGGCTACACTAACAAAAACACCCGAGTATCT | + |
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Preference number: 3 (lower is better) Translates to: APSQGPSCSPSH*PGYTNKNTRVS Trigger: AGATACTCGGGTGTTTTTGTTAGTGTAGCCTGGGCAGTGAGAAGGGCTGCAGGAGGGTCCTTGAGACGGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| 3UTR-3UTR CAA 90 bp | TCAAGGAGCTCACTGTACAGAGCTGCCCGCCGCAAACCCACACAGGCTTTAAAGTCATGGAGCCTGAGCTaGTCTGGGAACCACTGTCTG | + |
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Preference number: 3 (lower is better) Translates to: SRSSLYRAARRKPTQALKSWSLS*SGNHCL Trigger: CAGACAGTGGTTCCCAGACAAGCTCAGGCTCCATGA...CTTTAAAGCCTGTGTGGGTTTGCGGCGGGCAGCTCTGTACAGTGAGCTCCTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| 3UTR-3UTR CAA 90 bp | TCAAGGAGCTCACTGTACAGAGCTGCCCGCCGCAAACCCACACAGGCTTTAAAGATACACAGAATGTTCTaGAACCTGAGCTTAGGAGTT | + |
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Preference number: 3 (lower is better) Translates to: SRSSLYRAARRKPTQALKIHRMF*NLSLGV Trigger: AACTCCTAAGCTCAGGTTCAAGAACATTCTGTGTAT...CTTTAAAGCCTGTGTGGGTTTGCGGCGGGCAGCTCTGTACAGTGAGCTCCTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| 3UTR-3UTR CAA 90 bp | CAAAGTCAGGAGTCTCTAGATACACAGAATGTTCTTGAACCTGAGCTTAGGAGTTCATGGAGCCTGAGCTaGTCTGGGAACCACTGTCTG | + |
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Preference number: 3 (lower is better) Translates to: QSQESLDTQNVLEPELRSSWSLS*SGNHCL Trigger: CAGACAGTGGTTCCCAGACAAGCTCAGGCTCCATGA...ACTCCTAAGCTCAGGTTCAAGAACATTCTGTGTATCTAGAGACTCCTGACTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS-3UTR GCA 90 bp | CTCAGAGGTGGGTTCCCAGGGCCCCGTCTCAAGGACCCTCCTGCAGCCCTTCTCTCTTGGCTTCCGGAATaGCAAACTGTACTGCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: LRGGFPGPRLKDPPAALLSWLPE*QTVLLA Trigger: TGCCAGCAGTACAGTTTGGCATTCCGGAAGCCAAGA...GAGAAGGGCTGCAGGAGGGTCCTTGAGACGGGGCCCTGGGAACCCACCTCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| 3UTR CAA 72 bp | GCTTGTCTGGGAACCACTGTCTGGCATCTGACTCCCTaGTCTCAGAGGTGGGTTCCCAGGGCCCCGTCTCAA | + |
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Preference number: 4 (lower is better) Translates to: ACLGTTVWHLTP*SQRWVPRAPSQ Trigger: TTGAGACGGGGCCCTGGGAACCCACCTCTGAGACAAGGGAGTCAGATGCCAGACAGTGGTTCCCAGACAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS-3UTR GCA 90 bp | CTCAGAGGTGGGTTCCCAGGGCCCCGTCTCAAGGACCCTCCTGCAGCCCTTCTCACACGTAGGAATTGTTaGCTTGGCCAGGAAACAGAG | + |
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Preference number: 4 (lower is better) Translates to: LRGGFPGPRLKDPPAALLTRRNC*LGQETE Trigger: CTCTGTTTCCTGGCCAAGGCAACAATTCCTACGTGT...GAGAAGGGCTGCAGGAGGGTCCTTGAGACGGGGCCCTGGGAACCCACCTCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS-3UTR GCA 90 bp | CTCAGAGGTGGGTTCCCAGGGCCCCGTCTCAAGGACCCTCCTGCAGCCCTTCTCTATTTTCTGGACTTCTaGAGGCCACGGATAACAATC | + |
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Preference number: 4 (lower is better) Translates to: LRGGFPGPRLKDPPAALLYFLDF*RPRITI Trigger: GATTGTTATCCGTGGCCTGCAGAAGTCCAGAAAATA...GAGAAGGGCTGCAGGAGGGTCCTTGAGACGGGGCCCTGGGAACCCACCTCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS-3UTR GCA 90 bp | CTCAAGGACCCTCCTGCAGCCCTTCTCACTGCCCAGGCTACACTAACAAAAACAGTTCACCCCTCCACATaGCGTGTACAGGGCCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: LKDPPAALLTAQATLTKTVHPST*RVQGQF Trigger: AAACTGGCCCTGTACACGGCATGTGGAGGGGTGAAC...TGTTTTTGTTAGTGTAGCCTGGGCAGTGAGAAGGGCTGCAGGAGGGTCCTTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS-3UTR GCA 90 bp | CTCAAGGACCCTCCTGCAGCCCTTCTCACTGCCCAGGCTACACTAACAAAAACAGGTTATTCGAAGAGCTaGAAGGAGACCCGCAACCGC | + |
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Preference number: 4 (lower is better) Translates to: LKDPPAALLTAQATLTKTGYSKS*KETRNR Trigger: GCGGTTGCGGGTCTCCTTGCAGCTCTTCGAATAACC...TGTTTTTGTTAGTGTAGCCTGGGCAGTGAGAAGGGCTGCAGGAGGGTCCTTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS-3UTR CCA 90 bp | AAGGACCCTCCTGCAGCCCTTCTCACTGCCCAGGCTACACTAACAAAAACACCCCAAAAGGACTGCCGCTaGCAAAGATTGCACGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: KDPPAALLTAQATLTKTPQKDCR*QRLHVP Trigger: AGGGACGTGCAATCTTTGCCAGCGGCAGTCCTTTTG...GGGTGTTTTTGTTAGTGTAGCCTGGGCAGTGAGAAGGGCTGCAGGAGGGTCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS-3UTR TCA 90 bp | AAGGACCCTCCTGCAGCCCTTCTCACTGCCCAGGCTACACTAACAAAAACACCCGGCGGCAACAATCCATaGATGTTCAACTGCTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: KDPPAALLTAQATLTKTPGGNNP*MFNCCL Trigger: GAGACAGCAGTTGAACATTCATGGATTGTTGCCGCC...GGGTGTTTTTGTTAGTGTAGCCTGGGCAGTGAGAAGGGCTGCAGGAGGGTCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS-3UTR GCA 90 bp | AAGGACCCTCCTGCAGCCCTTCTCACTGCCCAGGCTACACTAACAAAAACACCCGAAAGCACCACCAATTaGAGCAACTCCTATGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: KDPPAALLTAQATLTKTPESTTN*SNSYEG Trigger: GCCCTCATAGGAGTTGCTGCAATTGGTGGTGCTTTC...GGGTGTTTTTGTTAGTGTAGCCTGGGCAGTGAGAAGGGCTGCAGGAGGGTCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS-3UTR GCA 90 bp | TCAAGGAGCTCACTGTACAGAGCTGCCCGCCGCAAACCCACACAGGCTTTAAAGCTGGATCAAAAGGACTaGCGCTGGCAAAGATTGCAC | + |
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Preference number: 4 (lower is better) Translates to: SRSSLYRAARRKPTQALKLDQKD*RWQRLH Trigger: GTGCAATCTTTGCCAGCGGCAGTCCTTTTGATCCAG...CTTTAAAGCCTGTGTGGGTTTGCGGCGGGCAGCTCTGTACAGTGAGCTCCTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS-3UTR CCA 90 bp | AAGGACCCTCCTGCAGCCCTTCTCACTGCCCAGGCTACACTAACAAAAACACCCATCTGGGAGAGTGACTaGATCAAAAGGACTGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: KDPPAALLTAQATLTKTPIWESD*IKRTAA Trigger: AGCGGCAGTCCTTTTGATCCAGTCACTCTCCCAGAT...GGGTGTTTTTGTTAGTGTAGCCTGGGCAGTGAGAAGGGCTGCAGGAGGGTCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS-3UTR TCA 90 bp | CTCAAGGACCCTCCTGCAGCCCTTCTCACTGCCCAGGCTACACTAACAAAAACAGGCGGCAACAATCCATaGATGTTCAACTGCTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: LKDPPAALLTAQATLTKTGGNNP*MFNCCL Trigger: GAGACAGCAGTTGAACATTCATGGATTGTTGCCGCC...TGTTTTTGTTAGTGTAGCCTGGGCAGTGAGAAGGGCTGCAGGAGGGTCCTTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS-3UTR TCA 90 bp | ATGTTCTTGAACCTGAGCTTAGGAGTTAAGGCTGTTTCTAGTCATGCCATTATCCATACTCAGGGCCTCTaGCTCGCCGGTGCCGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: MFLNLSLGVKAVSSHAIIHTQGL*LAGAAA Trigger: GGCTGCGGCACCGGCGAGTCAGAGGCCCTGAGTATG...GATAATGGCATGACTAGAAACAGCCTTAACTCCTAAGCTCAGGTTCAAGAACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS-3UTR GCA 90 bp | CTCAAGGACCCTCCTGCAGCCCTTCTCACTGCCCAGGCTACACTAACAAAAACAGTTTACCCACAGGGATaGCCATCCCATTACAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: LKDPPAALLTAQATLTKTVYPQG*PSHYSQ Trigger: TTGGCTGTAATGGGATGGGCATCCCTGTGGGTAAAC...TGTTTTTGTTAGTGTAGCCTGGGCAGTGAGAAGGGCTGCAGGAGGGTCCTTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS-3UTR CCA 90 bp | AGAGCTGCCCGCCGCAAACCCACACAGGCTTTAAAGCAACTTCAAAGTCAGGAGATCTGGGAGAGTGACTaGATCAAAAGGACTGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: RAARRKPTQALKQLQSQEIWESD*IKRTAA Trigger: AGCGGCAGTCCTTTTGATCCAGTCACTCTCCCAGAT...CTCCTGACTTTGAAGTTGCTTTAAAGCCTGTGTGGGTTTGCGGCGGGCAGCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS-3UTR TCA 90 bp | CTCAAGGACCCTCCTGCAGCCCTTCTCACTGCCCAGGCTACACTAACAAAAACATGGAACAGCACTGTCTaGTCAGAGAGCTTGTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: LKDPPAALLTAQATLTKTWNSTV*SESLFL Trigger: CAAGAACAAGCTCTCTGATCAGACAGTGCTGTTCCA...TGTTTTTGTTAGTGTAGCCTGGGCAGTGAGAAGGGCTGCAGGAGGGTCCTTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS-3UTR TCA 90 bp | TCAAGGAGCTCACTGTACAGAGCTGCCCGCCGCAAACCCACACAGGCTTTAAAGTTATCTGACACTTGCTaGGATATGACCTCAGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: SRSSLYRAARRKPTQALKLSDTC*DMTSAV Trigger: CACTGCTGAGGTCATATCTCAGCAAGTGTCAGATAA...CTTTAAAGCCTGTGTGGGTTTGCGGCGGGCAGCTCTGTACAGTGAGCTCCTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS-3UTR GCA 90 bp | TCACTGTACAGAGCTGCCCGCCGCAAACCCACACAGGCTTTAAAGCAACTTCAAGAAAGCACCACCAATTaGAGCAACTCCTATGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: SLYRAARRKPTQALKQLQESTTN*SNSYEG Trigger: GCCCTCATAGGAGTTGCTGCAATTGGTGGTGCTTTC...TTGAAGTTGCTTTAAAGCCTGTGTGGGTTTGCGGCGGGCAGCTCTGTACAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS-3UTR CCA 90 bp | TCAAGGAGCTCACTGTACAGAGCTGCCCGCCGCAAACCCACACAGGCTTTAAAGAATAAAGAGGCCTCTTaGCTTCCGGAATGCCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: SRSSLYRAARRKPTQALKNKEAS*LPECQT Trigger: AGTTTGGCATTCCGGAAGCCAAGAGGCCTCTTTATT...CTTTAAAGCCTGTGTGGGTTTGCGGCGGGCAGCTCTGTACAGTGAGCTCCTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR GCA 90 bp | GTGGGTCTTCCATTAGCTTCCTACATATCAGTGAGGACTTTCTCAGCAGCAGGTCTTGTAGCACTGCTCTaGAGAGCACTCCGCTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VGLPLASYISVRTFSAAGLVALL*RALRFA Trigger: AGCAAAGCGGAGTGCTCTGCAGAGCAGTGCTACAAG...ACCTGCTGCTGAGAAAGTCCTCACTGATATGTAGGAAGCTAATGGAAGACCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCTGCCCGCCGCAAACCCACACAGGCTTTAAAGCAACTTCAAAGTCAGGAGATTATTCTAAGGACCTaGAGCTCCTGGCTGATGATG | + |
|
Preference number: 4 (lower is better) Translates to: RAARRKPTQALKQLQSQEIILRT*SSWLMM Trigger: CATCATCAGCCAGGAGCTCCAGGTCCTTAGAATAAT...CTCCTGACTTTGAAGTTGCTTTAAAGCCTGTGTGGGTTTGCGGCGGGCAGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR CCA 90 bp | GTGGGTCTTCCATTAGCTTCCTACATATCAGTGAGGACTTTCTCAGCAGCAGGTCAAAAGGACTGCCGCTaGCAAAGATTGCACGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VGLPLASYISVRTFSAAGQKDCR*QRLHVP Trigger: AGGGACGTGCAATCTTTGCCAGCGGCAGTCCTTTTG...ACCTGCTGCTGAGAAAGTCCTCACTGATATGTAGGAAGCTAATGGAAGACCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR CCA 90 bp | AAGGACCCTCCTGCAGCCCTTCTCACTGCCCAGGCTACACTAACAAAAACACCCACGAAACGCCTCGAATaGTATTCAAAGGAGGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: KDPPAALLTAQATLTKTPTKRLE*YSKEDR Trigger: TCTATCCTCCTTTGAATACCATTCGAGGCGTTTCGT...GGGTGTTTTTGTTAGTGTAGCCTGGGCAGTGAGAAGGGCTGCAGGAGGGTCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| 3UTR CAA 72 bp | AACAAAAACACCCGAGTATCTCAGCAGGGCCAGGGGTaGCTCAGAGATGAGAAAGGGTGTTTCTATGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: NKNTRVSQQGQG*LRDEKGCFYGV Trigger: CACTCCATAGAAACACCCTTTCTCATCTCTGAGCAACCCCTGGCCCTGCTGAGATACTCGGGTGTTTTTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR TCA 90 bp | TCACTGTACAGAGCTGCCCGCCGCAAACCCACACAGGCTTTAAAGCAACTTCAATTATCTGACACTTGCTaGGATATGACCTCAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLYRAARRKPTQALKQLQLSDTC*DMTSAV Trigger: CACTGCTGAGGTCATATCTCAGCAAGTGTCAGATAA...TTGAAGTTGCTTTAAAGCCTGTGTGGGTTTGCGGCGGGCAGCTCTGTACAGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR GCA 90 bp | GTGGGTCTTCCATTAGCTTCCTACATATCAGTGAGGACTTTCTCAGCAGCAGGTGTTTACCCACAGGGATaGCCATCCCATTACAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VGLPLASYISVRTFSAAGVYPQG*PSHYSQ Trigger: TTGGCTGTAATGGGATGGGCATCCCTGTGGGTAAAC...ACCTGCTGCTGAGAAAGTCCTCACTGATATGTAGGAAGCTAATGGAAGACCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR GCA 90 bp | CTCAAGGACCCTCCTGCAGCCCTTCTCACTGCCCAGGCTACACTAACAAAAACAGTTCAGGAGACGAAATaGATTCCGATTGGCAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: LKDPPAALLTAQATLTKTVQETK*IPIGKI Trigger: GATTTTGCCAATCGGAATGCATTTCGTCTCCTGAAC...TGTTTTTGTTAGTGTAGCCTGGGCAGTGAGAAGGGCTGCAGGAGGGTCCTTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR GCA 90 bp | GTGGGTCTTCCATTAGCTTCCTACATATCAGTGAGGACTTTCTCAGCAGCAGGTCTGGATCAAAAGGACTaGCGCTGGCAAAGATTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VGLPLASYISVRTFSAAGLDQKD*RWQRLH Trigger: GTGCAATCTTTGCCAGCGGCAGTCCTTTTGATCCAG...ACCTGCTGCTGAGAAAGTCCTCACTGATATGTAGGAAGCTAATGGAAGACCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR TCA 90 bp | GTGGGTCTTCCATTAGCTTCCTACATATCAGTGAGGACTTTCTCAGCAGCAGGTTGGAACAGCACTGTCTaGTCAGAGAGCTTGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VGLPLASYISVRTFSAAGWNSTV*SESLFL Trigger: CAAGAACAAGCTCTCTGATCAGACAGTGCTGTTCCA...ACCTGCTGCTGAGAAAGTCCTCACTGATATGTAGGAAGCTAATGGAAGACCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR GCA 90 bp | ATTAGCTTCCTACATATCAGTGAGGACTTTCTCAGCAGCAGGTACAGTAGCTTTGGTTATTCGAAGAGCTaGAAGGAGACCCGCAACCGC | + |
|
Preference number: 4 (lower is better) Translates to: ISFLHISEDFLSSRYSSFGYSKS*KETRNR Trigger: GCGGTTGCGGGTCTCCTTGCAGCTCTTCGAATAACC...AAAGCTACTGTACCTGCTGCTGAGAAAGTCCTCACTGATATGTAGGAAGCTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR GCA 90 bp | TCAAGGAGCTCACTGTACAGAGCTGCCCGCCGCAAACCCACACAGGCTTTAAAGTTGCACAATCTTTACTaGAATTTTCAACGAAACGCC | + |
|
Preference number: 4 (lower is better) Translates to: SRSSLYRAARRKPTQALKLHNLY*NFQRNA Trigger: GGCGTTTCGTTGAAAATTGCAGTAAAGATTGTGCAA...CTTTAAAGCCTGTGTGGGTTTGCGGCGGGCAGCTCTGTACAGTGAGCTCCTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR CCA 90 bp | TCACTGTACAGAGCTGCCCGCCGCAAACCCACACAGGCTTTAAAGCAACTTCAAACGAAACGCCTCGAATaGTATTCAAAGGAGGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLYRAARRKPTQALKQLQTKRLE*YSKEDR Trigger: TCTATCCTCCTTTGAATACCATTCGAGGCGTTTCGT...TTGAAGTTGCTTTAAAGCCTGTGTGGGTTTGCGGCGGGCAGCTCTGTACAGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR TCA 90 bp | CTCAAGGACCCTCCTGCAGCCCTTCTCACTGCCCAGGCTACACTAACAAAAACAGTTGGTTTTATCTTTTaGACAATGGCTTCCAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: LKDPPAALLTAQATLTKTVGFIF*TMASRF Trigger: GAATCTGGAAGCCATTGTTCAAAAGATAAAACCAAC...TGTTTTTGTTAGTGTAGCCTGGGCAGTGAGAAGGGCTGCAGGAGGGTCCTTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR TCA 90 bp | ATTAGCTTCCTACATATCAGTGAGGACTTTCTCAGCAGCAGGTACAGTAGCTTTGTCCATCTGGGAGAGTaGCTGGATCAAAAGGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: ISFLHISEDFLSSRYSSFVHLGE*LDQKDC Trigger: GCAGTCCTTTTGATCCAGTCACTCTCCCAGATGGAC...AAAGCTACTGTACCTGCTGCTGAGAAAGTCCTCACTGATATGTAGGAAGCTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR GCA 90 bp | CAAAGTCAGGAGTCTCTAGATACACAGAATGTTCTTGAACCTGAGCTTAGGAGTCTCCCAAGCCAAGGATaGGCTCTCCATCAGTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: QSQESLDTQNVLEPELRSLPSQG*ALHQLP Trigger: TGGTAACTGATGGAGAGCGCATCCTTGGCTTGGGAG...ACTCCTAAGCTCAGGTTCAAGAACATTCTGTGTATCTAGAGACTCCTGACTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR GCA 90 bp | AAGAGAACAAAGCTAACGGAGGCCTGGAATAAAAGTCCTGAGAAGATTTTTCTCGTTCACCCCTCCACATaGCGTGTACAGGGCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KRTKLTEAWNKSPEKIFLVHPST*RVQGQF Trigger: AAACTGGCCCTGTACACGGCATGTGGAGGGGTGAAC...GAGAAAAATCTTCTCAGGACTTTTATTCCAGGCCTCCGTTAGCTTTGTTCTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR GCA 90 bp | ATTAGCTTCCTACATATCAGTGAGGACTTTCTCAGCAGCAGGTACAGTAGCTTTCTTGTAGCACTGCTCTaGAGAGCACTCCGCTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ISFLHISEDFLSSRYSSFLVALL*RALRFA Trigger: AGCAAAGCGGAGTGCTCTGCAGAGCAGTGCTACAAG...AAAGCTACTGTACCTGCTGCTGAGAAAGTCCTCACTGATATGTAGGAAGCTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR GCA 90 bp | CTCAAGGACCCTCCTGCAGCCCTTCTCACTGCCCAGGCTACACTAACAAAAACATTGCACAATCTTTACTaGAATTTTCAACGAAACGCC | + |
|
Preference number: 4 (lower is better) Translates to: LKDPPAALLTAQATLTKTLHNLY*NFQRNA Trigger: GGCGTTTCGTTGAAAATTGCAGTAAAGATTGTGCAA...TGTTTTTGTTAGTGTAGCCTGGGCAGTGAGAAGGGCTGCAGGAGGGTCCTTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR CCA 90 bp | CTCAAGGACCCTCCTGCAGCCCTTCTCACTGCCCAGGCTACACTAACAAAAACAGTTCAGGATAAACAGTaGCCATCTTTTCTTTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: LKDPPAALLTAQATLTKTVQDKQ*PSFLCM Trigger: CATACAAAGAAAAGATGGCCACTGTTTATCCTGAAC...TGTTTTTGTTAGTGTAGCCTGGGCAGTGAGAAGGGCTGCAGGAGGGTCCTTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR TCA 90 bp | TCACTGTACAGAGCTGCCCGCCGCAAACCCACACAGGCTTTAAAGCAACTTCAAGTTGGTTTTATCTTTTaGACAATGGCTTCCAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: SLYRAARRKPTQALKQLQVGFIF*TMASRF Trigger: GAATCTGGAAGCCATTGTTCAAAAGATAAAACCAAC...TTGAAGTTGCTTTAAAGCCTGTGTGGGTTTGCGGCGGGCAGCTCTGTACAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR TCA 90 bp | ATGTTCTTGAACCTGAGCTTAGGAGTTAAGGCTGTTTCTAGTCATGCCATTATCGTCCATCTGGGAGAGTaGCTGGATCAAAAGGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: MFLNLSLGVKAVSSHAIIVHLGE*LDQKDC Trigger: GCAGTCCTTTTGATCCAGTCACTCTCCCAGATGGAC...GATAATGGCATGACTAGAAACAGCCTTAACTCCTAAGCTCAGGTTCAAGAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR CCA 90 bp | CTCAAGGACCCTCCTGCAGCCCTTCTCACTGCCCAGGCTACACTAACAAAAACATCCTATGAGGGCAGTTaGTTTTATCTTTTGAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: LKDPPAALLTAQATLTKTSYEGS*FYLLNN Trigger: ATTGTTCAAAAGATAAAACCAACTGCCCTCATAGGA...TGTTTTTGTTAGTGTAGCCTGGGCAGTGAGAAGGGCTGCAGGAGGGTCCTTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCTGCCCGCCGCAAACCCACACAGGCTTTAAAGCAACTTCAAAGTCAGGAGTCCTATGAGGGCAGTTaGTTTTATCTTTTGAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: RAARRKPTQALKQLQSQESYEGS*FYLLNN Trigger: ATTGTTCAAAAGATAAAACCAACTGCCCTCATAGGA...CTCCTGACTTTGAAGTTGCTTTAAAGCCTGTGTGGGTTTGCGGCGGGCAGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR CCA 90 bp | TCACTGTACAGAGCTGCCCGCCGCAAACCCACACAGGCTTTAAAGCAACTTCAAGTTCAGGATAAACAGTaGCCATCTTTTCTTTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: SLYRAARRKPTQALKQLQVQDKQ*PSFLCM Trigger: CATACAAAGAAAAGATGGCCACTGTTTATCCTGAAC...TTGAAGTTGCTTTAAAGCCTGTGTGGGTTTGCGGCGGGCAGCTCTGTACAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR GCA 90 bp | AAGAGAACAAAGCTAACGGAGGCCTGGAATAAAAGTCCTGAGAAGATTTTTCTCTCTTGGCTTCCGGAATaGCAAACTGTACTGCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KRTKLTEAWNKSPEKIFLSWLPE*QTVLLA Trigger: TGCCAGCAGTACAGTTTGGCATTCCGGAAGCCAAGA...GAGAAAAATCTTCTCAGGACTTTTATTCCAGGCCTCCGTTAGCTTTGTTCTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR GCA 90 bp | GTGGGTCTTCCATTAGCTTCCTACATATCAGTGAGGACTTTCTCAGCAGCAGGTAGAACTGAAGCAATGTaGCCTTTGTCATGGATACTA | + |
|
Preference number: 4 (lower is better) Translates to: VGLPLASYISVRTFSAAGRTEAM*PLSWIL Trigger: TAGTATCCATGACAAAGGGCACATTGCTTCAGTTCT...ACCTGCTGCTGAGAAAGTCCTCACTGATATGTAGGAAGCTAATGGAAGACCCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR CCA 90 bp | CAAAGTCAGGAGTCTCTAGATACACAGAATGTTCTTGAACCTGAGCTTAGGAGTAGCACTCCGCTTTGCTaGTCGGATTACTCAAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QSQESLDTQNVLEPELRSSTPLC*SDYSKQ Trigger: TTGCTTTGAGTAATCCGACCAGCAAAGCGGAGTGCT...ACTCCTAAGCTCAGGTTCAAGAACATTCTGTGTATCTAGAGACTCCTGACTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGTCAGGAGTCTCTAGATACACAGAATGTTCTTGAACCTGAGCTTAGGAGTTTTCAACATCAGACATaGGCACGCTGTAGAAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QSQESLDTQNVLEPELRSFQHQT*ARCRRA Trigger: AGCTCTTCTACAGCGTGCTCATGTCTGATGTTGAAA...ACTCCTAAGCTCAGGTTCAAGAACATTCTGTGTATCTAGAGACTCCTGACTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR GCA 90 bp | AAGAGAACAAAGCTAACGGAGGCCTGGAATAAAAGTCCTGAGAAGATTTTTCTCACACGTAGGAATTGTTaGCTTGGCCAGGAAACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KRTKLTEAWNKSPEKIFLTRRNC*LGQETE Trigger: CTCTGTTTCCTGGCCAAGGCAACAATTCCTACGTGT...GAGAAAAATCTTCTCAGGACTTTTATTCCAGGCCTCCGTTAGCTTTGTTCTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR CCA 90 bp | ATTAGCTTCCTACATATCAGTGAGGACTTTCTCAGCAGCAGGTACAGTAGCTTTATTATTCTAAGGACCTaGAGCTCCTGGCTGATGATG | + |
|
Preference number: 4 (lower is better) Translates to: ISFLHISEDFLSSRYSSFIILRT*SSWLMM Trigger: CATCATCAGCCAGGAGCTCCAGGTCCTTAGAATAAT...AAAGCTACTGTACCTGCTGCTGAGAAAGTCCTCACTGATATGTAGGAAGCTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR CCA 90 bp | CAAAGTCAGGAGTCTCTAGATACACAGAATGTTCTTGAACCTGAGCTTAGGAGTAATAAAGAGGCCTCTTaGCTTCCGGAATGCCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: QSQESLDTQNVLEPELRSNKEAS*LPECQT Trigger: AGTTTGGCATTCCGGAAGCCAAGAGGCCTCTTTATT...ACTCCTAAGCTCAGGTTCAAGAACATTCTGTGTATCTAGAGACTCCTGACTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR CCA 90 bp | AAGAGAACAAAGCTAACGGAGGCCTGGAATAAAAGTCCTGAGAAGATTTTTCTCAGCACTCCGCTTTGCTaGTCGGATTACTCAAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KRTKLTEAWNKSPEKIFLSTPLC*SDYSKQ Trigger: TTGCTTTGAGTAATCCGACCAGCAAAGCGGAGTGCT...GAGAAAAATCTTCTCAGGACTTTTATTCCAGGCCTCCGTTAGCTTTGTTCTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR TCA 90 bp | ATGTTCTTGAACCTGAGCTTAGGAGTTAAGGCTGTTTCTAGTCATGCCATTATCTTTCAACATCAGACATaGGCACGCTGTAGAAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: MFLNLSLGVKAVSSHAIIFQHQT*ARCRRA Trigger: AGCTCTTCTACAGCGTGCTCATGTCTGATGTTGAAA...GATAATGGCATGACTAGAAACAGCCTTAACTCCTAAGCTCAGGTTCAAGAACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR GCA 90 bp | ATGTTCTTGAACCTGAGCTTAGGAGTTAAGGCTGTTTCTAGTCATGCCATTATCGTTCAGGAGACGAAATaGATTCCGATTGGCAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: MFLNLSLGVKAVSSHAIIVQETK*IPIGKI Trigger: GATTTTGCCAATCGGAATGCATTTCGTCTCCTGAAC...GATAATGGCATGACTAGAAACAGCCTTAACTCCTAAGCTCAGGTTCAAGAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR GCA 90 bp | ATGTTCTTGAACCTGAGCTTAGGAGTTAAGGCTGTTTCTAGTCATGCCATTATCTATTTTCTGGACTTCTaGAGGCCACGGATAACAATC | + |
|
Preference number: 4 (lower is better) Translates to: MFLNLSLGVKAVSSHAIIYFLDF*RPRITI Trigger: GATTGTTATCCGTGGCCTGCAGAAGTCCAGAAAATA...GATAATGGCATGACTAGAAACAGCCTTAACTCCTAAGCTCAGGTTCAAGAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR CCA 90 bp | ATTAGCTTCCTACATATCAGTGAGGACTTTCTCAGCAGCAGGTACAGTAGCTTTTTAGTGCTGTACATCTaGGAGGAGACAAATTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ISFLHISEDFLSSRYSSFLVLYI*EETNSS Trigger: AGAAGAATTTGTCTCCTCCCAGATGTACAGCACTAA...AAAGCTACTGTACCTGCTGCTGAGAAAGTCCTCACTGATATGTAGGAAGCTAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR GCA 90 bp | AAGAGAACAAAGCTAACGGAGGCCTGGAATAAAAGTCCTGAGAAGATTTTTCTCAGAACTGAAGCAATGTaGCCTTTGTCATGGATACTA | + |
|
Preference number: 4 (lower is better) Translates to: KRTKLTEAWNKSPEKIFLRTEAM*PLSWIL Trigger: TAGTATCCATGACAAAGGGCACATTGCTTCAGTTCT...GAGAAAAATCTTCTCAGGACTTTTATTCCAGGCCTCCGTTAGCTTTGTTCTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR CCA 90 bp | AAGAGAACAAAGCTAACGGAGGCCTGGAATAAAAGTCCTGAGAAGATTTTTCTCATGTGCCCTTTGTCATaGATACTAATAAAGAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KRTKLTEAWNKSPEKIFLMCPLS*ILIKRP Trigger: AGGCCTCTTTATTAGTATCCATGACAAAGGGCACAT...GAGAAAAATCTTCTCAGGACTTTTATTCCAGGCCTCCGTTAGCTTTGTTCTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR CCA 90 bp | AAGAGAACAAAGCTAACGGAGGCCTGGAATAAAAGTCCTGAGAAGATTTTTCTCTTAGTGCTGTACATCTaGGAGGAGACAAATTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KRTKLTEAWNKSPEKIFLLVLYI*EETNSS Trigger: AGAAGAATTTGTCTCCTCCCAGATGTACAGCACTAA...GAGAAAAATCTTCTCAGGACTTTTATTCCAGGCCTCCGTTAGCTTTGTTCTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR CAA 90 bp | CTCAGAGGTGGGTTCCCAGGGCCCCGTCTCAAGGACCCTCCTGCAGCCCTTCTCGCAGAGCACTCCGCTTaGCTGGTCGGATTACTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LRGGFPGPRLKDPPAALLAEHSA*LVGLLK Trigger: TTTGAGTAATCCGACCAGCAAAGCGGAGTGCTCTGC...GAGAAGGGCTGCAGGAGGGTCCTTGAGACGGGGCCCTGGGAACCCACCTCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS CCA 90 bp | GTTGCCTTGGCCAGGAAACAGAGTCCGTCCATCTGGGAGAGTGACTaGATCAAAAGGACTGCCGCTGGCAAAGATTGCACGTCCCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: VALARKQSPSIWESD*IKRTAAGKDCTSLG Trigger: ACCAAGGGACGTGCAATCTTTGCCAGCGGCAGTCCTTTTGATCCAGTCACTCTCCCAGATGGACGGACTCTGTTTCCTGGCCAAGGCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
||
| CDS-3UTR CAA 90 bp | CTCAGAGGTGGGTTCCCAGGGCCCCGTCTCAAGGACCCTCCTGCAGCCCTTCTCTACTTGTTTCGATACTaGTTCAGGAGACGAAATGCA | + |
|
Preference number: 5 (lower is better) Translates to: LRGGFPGPRLKDPPAALLYLFRY*FRRRNA Trigger: TGCATTTCGTCTCCTGAACAAGTATCGAAACAAGTA...GAGAAGGGCTGCAGGAGGGTCCTTGAGACGGGGCCCTGGGAACCCACCTCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS-3UTR CAA 90 bp | CTCAGAGGTGGGTTCCCAGGGCCCCGTCTCAAGGACCCTCCTGCAGCCCTTCTCAAGGCAGCCATATCCTaGAGAATTTGTTCAGTGAAA | + |
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Preference number: 5 (lower is better) Translates to: LRGGFPGPRLKDPPAALLKAAIS*RICSVK Trigger: TTTCACTGAACAAATTCTCAAGGATATGGCTGCCTT...GAGAAGGGCTGCAGGAGGGTCCTTGAGACGGGGCCCTGGGAACCCACCTCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS GCA 90 bp | CCCTTTGTCATGGATACTAATAAAGAGGCCTCTTGGCTTCCGGAATaGCAAACTGTACTGCTGGCATGCGAGGCCCACGGTGGGGGTGTA | + |
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Preference number: 5 (lower is better) Translates to: PFVMDTNKEASWLPE*QTVLLACEAHGGGV Trigger: TACACCCCCACCGTGGGCCTCGCATGCCAGCAGTACAGTTTGGCATTCCGGAAGCCAAGAGGCCTCTTTATTAGTATCCATGACAAAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS GCA 90 bp | AACTCATCCAGGAAGGCGTCATACTCAGGGCCTCTGACTCGCCGGTaGCGCAGCCCGATGTACAGTGGATCCTTAAGTAACTCCTCATTT | + |
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Preference number: 5 (lower is better) Translates to: NSSRKASYSGPLTRR*RSPMYSGSLSNSSF Trigger: AAATGAGGAGTTACTTAAGGATCCACTGTACATCGGGCTGCGGCACCGGCGAGTCAGAGGCCCTGAGTATGACGCCTTCCTGGATGAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS-3UTR CAA 90 bp | AAGGACCCTCCTGCAGCCCTTCTCACTGCCCAGGCTACACTAACAAAAACACCCGCAGAGCACTCCGCTTaGCTGGTCGGATTACTCAAA | + |
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Preference number: 5 (lower is better) Translates to: KDPPAALLTAQATLTKTPAEHSA*LVGLLK Trigger: TTTGAGTAATCCGACCAGCAAAGCGGAGTGCTCTGC...GGGTGTTTTTGTTAGTGTAGCCTGGGCAGTGAGAAGGGCTGCAGGAGGGTCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS-3UTR CAA 90 bp | AAGGACCCTCCTGCAGCCCTTCTCACTGCCCAGGCTACACTAACAAAAACACCCGTAGGAATTGTTGCCTaGGCCAGGAAACAGAGTCCG | + |
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Preference number: 5 (lower is better) Translates to: KDPPAALLTAQATLTKTPVGIVA*ARKQSP Trigger: CGGACTCTGTTTCCTGGCCAAGGCAACAATTCCTAC...GGGTGTTTTTGTTAGTGTAGCCTGGGCAGTGAGAAGGGCTGCAGGAGGGTCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS TCA 90 bp | AATTGTTGCCTTGGCCAGGAAACAGAGTCCGTCCATCTGGGAGAGTaGCTGGATCAAAAGGACTGCCGCTGGCAAAGATTGCACGTCCCT | + |
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Preference number: 5 (lower is better) Translates to: NCCLGQETESVHLGE*LDQKDCRWQRLHVP Trigger: AGGGACGTGCAATCTTTGCCAGCGGCAGTCCTTTTGATCCAGTCACTCTCCCAGATGGACGGACTCTGTTTCCTGGCCAAGGCAACAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS CCA 90 bp | CACGTAGGAATTGTTGCCTTGGCCAGGAAACAGAGTCCGTCCATCTaGGAGAGTGACTGGATCAAAAGGACTGCCGCTGGCAAAGATTGC | + |
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Preference number: 5 (lower is better) Translates to: HVGIVALARKQSPSI*ESDWIKRTAAGKDC Trigger: GCAATCTTTGCCAGCGGCAGTCCTTTTGATCCAGTCACTCTCCCAGATGGACGGACTCTGTTTCCTGGCCAAGGCAACAATTCCTACGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS-3UTR CAA 90 bp | TCACTGTACAGAGCTGCCCGCCGCAAACCCACACAGGCTTTAAAGCAACTTCAAATGATGGGCCGCTCGTaGAAGGCAGCCATATCCTTG | + |
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Preference number: 5 (lower is better) Translates to: SLYRAARRKPTQALKQLQMMGRS*KAAISL Trigger: CAAGGATATGGCTGCCTTCAACGAGCGGCCCATCAT...TTGAAGTTGCTTTAAAGCCTGTGTGGGTTTGCGGCGGGCAGCTCTGTACAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS GCA 90 bp | GCTGGCAAAGATTGCACGTCCCTTGGTCACCTTGTAGCACTGCTCTaGAGAGCACTCCGCTTTGCTGGTCGGATTACTCAAAGCAAAGAT | + |
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Preference number: 5 (lower is better) Translates to: AGKDCTSLGHLVALL*RALRFAGRITQSKD Trigger: ATCTTTGCTTTGAGTAATCCGACCAGCAAAGCGGAGTGCTCTGCAGAGCAGTGCTACAAGGTGACCAAGGGACGTGCAATCTTTGCCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS-3UTR CAA 90 bp | TCACTGTACAGAGCTGCCCGCCGCAAACCCACACAGGCTTTAAAGCAACTTCAAGTAGGAATTGTTGCCTaGGCCAGGAAACAGAGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: SLYRAARRKPTQALKQLQVGIVA*ARKQSP Trigger: CGGACTCTGTTTCCTGGCCAAGGCAACAATTCCTAC...TTGAAGTTGCTTTAAAGCCTGTGTGGGTTTGCGGCGGGCAGCTCTGTACAGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS-3UTR CAA 90 bp | AAGGACCCTCCTGCAGCCCTTCTCACTGCCCAGGCTACACTAACAAAAACACCCTCAGAGAGCTTGTTCTaGGTTATTCGAAGAGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: KDPPAALLTAQATLTKTPSESLF*VIRRAA Trigger: TGCAGCTCTTCGAATAACCAAGAACAAGCTCTCTGA...GGGTGTTTTTGTTAGTGTAGCCTGGGCAGTGAGAAGGGCTGCAGGAGGGTCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS-3UTR CAA 90 bp | AGAGCTGCCCGCCGCAAACCCACACAGGCTTTAAAGCAACTTCAAAGTCAGGAGTCAGAGAGCTTGTTCTaGGTTATTCGAAGAGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RAARRKPTQALKQLQSQESESLF*VIRRAA Trigger: TGCAGCTCTTCGAATAACCAAGAACAAGCTCTCTGA...CTCCTGACTTTGAAGTTGCTTTAAAGCCTGTGTGGGTTTGCGGCGGGCAGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS-3UTR CAA 90 bp | AAGGACCCTCCTGCAGCCCTTCTCACTGCCCAGGCTACACTAACAAAAACACCCGTGGCCATCTTTTCTTaGTATGCATCTTGCACAATC | + |
|
Preference number: 5 (lower is better) Translates to: KDPPAALLTAQATLTKTPVAIFS*YASCTI Trigger: GATTGTGCAAGATGCATACAAAGAAAAGATGGCCAC...GGGTGTTTTTGTTAGTGTAGCCTGGGCAGTGAGAAGGGCTGCAGGAGGGTCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS-3UTR CAA 90 bp | AGAGCTGCCCGCCGCAAACCCACACAGGCTTTAAAGCAACTTCAAAGTCAGGAGTACTTGTTTCGATACTaGTTCAGGAGACGAAATGCA | + |
|
Preference number: 5 (lower is better) Translates to: RAARRKPTQALKQLQSQEYLFRY*FRRRNA Trigger: TGCATTTCGTCTCCTGAACAAGTATCGAAACAAGTA...CTCCTGACTTTGAAGTTGCTTTAAAGCCTGTGTGGGTTTGCGGCGGGCAGCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS-3UTR CAA 90 bp | ATTAGCTTCCTACATATCAGTGAGGACTTTCTCAGCAGCAGGTACAGTAGCTTTATGATGGGCCGCTCGTaGAAGGCAGCCATATCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ISFLHISEDFLSSRYSSFMMGRS*KAAISL Trigger: CAAGGATATGGCTGCCTTCAACGAGCGGCCCATCAT...AAAGCTACTGTACCTGCTGCTGAGAAAGTCCTCACTGATATGTAGGAAGCTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS GCA 90 bp | ATCTTCAAACTGAATAAGGCAATTCATGCCATATTTGGAAGACGCTaGCTCCATGAACTCATCCAGGAAGGCGTCATACTCAGGGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: IFKLNKAIHAIFGRR*LHELIQEGVILRAS Trigger: AGAGGCCCTGAGTATGACGCCTTCCTGGATGAGTTCATGGAGGCAGCGTCTTCCAAATATGGCATGAATTGCCTTATTCAGTTTGAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS-3UTR CAA 90 bp | GTGGGTCTTCCATTAGCTTCCTACATATCAGTGAGGACTTTCTCAGCAGCAGGTGAAGCAATGTGCCCTTaGTCATGGATACTAATAAAG | + |
|
Preference number: 5 (lower is better) Translates to: VGLPLASYISVRTFSAAGEAMCP*SWILIK Trigger: CTTTATTAGTATCCATGACAAAGGGCACATTGCTTC...ACCTGCTGCTGAGAAAGTCCTCACTGATATGTAGGAAGCTAATGGAAGACCCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS-3UTR CAA 90 bp | GTGGGTCTTCCATTAGCTTCCTACATATCAGTGAGGACTTTCTCAGCAGCAGGTAAGGCAGCCATATCCTaGAGAATTTGTTCAGTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: VGLPLASYISVRTFSAAGKAAIS*RICSVK Trigger: TTTCACTGAACAAATTCTCAAGGATATGGCTGCCTT...ACCTGCTGCTGAGAAAGTCCTCACTGATATGTAGGAAGCTAATGGAAGACCCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS CCA 90 bp | CATCTTGCACAATCTTTACTGCAATTTTCAACGAAACGCCTCGAATaGTATTCAAAGGAGGATAGAGCCGGCCTTCTTGCAGGTGTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: HLAQSLLQFSTKRLE*YSKEDRAGLLAGVY Trigger: ATAAACACCTGCAAGAAGGCCGGCTCTATCCTCCTTTGAATACCATTCGAGGCGTTTCGTTGAAAATTGCAGTAAAGATTGTGCAAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS-3UTR CAA 90 bp | ATTAGCTTCCTACATATCAGTGAGGACTTTCTCAGCAGCAGGTACAGTAGCTTTGAAGCAATGTGCCCTTaGTCATGGATACTAATAAAG | + |
|
Preference number: 5 (lower is better) Translates to: ISFLHISEDFLSSRYSSFEAMCP*SWILIK Trigger: CTTTATTAGTATCCATGACAAAGGGCACATTGCTTC...AAAGCTACTGTACCTGCTGCTGAGAAAGTCCTCACTGATATGTAGGAAGCTAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS-3UTR CAA 90 bp | AAGAGAACAAAGCTAACGGAGGCCTGGAATAAAAGTCCTGAGAAGATTTTTCTCAACAGACGCTGTTCCTaGAATATCATCGTTAAATGT | + |
|
Preference number: 5 (lower is better) Translates to: KRTKLTEAWNKSPEKIFLNRRCS*NIIVKC Trigger: ACATTTAACGATGATATTCAAGGAACAGCGTCTGTT...GAGAAAAATCTTCTCAGGACTTTTATTCCAGGCCTCCGTTAGCTTTGTTCTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS-3UTR CAA 90 bp | GGAGTTAAGGCTGTTTCTAGTCATGCCATTATCAACGTGTCCAGTAAATTAATAGTGGCCATCTTTTCTTaGTATGCATCTTGCACAATC | + |
|
Preference number: 5 (lower is better) Translates to: GVKAVSSHAIINVSSKLIVAIFS*YASCTI Trigger: GATTGTGCAAGATGCATACAAAGAAAAGATGGCCAC...TATTAATTTACTGGACACGTTGATAATGGCATGACTAGAAACAGCCTTAACTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS GCA 90 bp | GTTAAATGTGCAATACTTGTTTCGATACTTGTTCAGGAGACGAAATaGATTCCGATTGGCAAAATCTTCAAACTGAATAAGGCAATTCAT | + |
|
Preference number: 5 (lower is better) Translates to: VKCAILVSILVQETK*IPIGKIFKLNKAIH Trigger: ATGAATTGCCTTATTCAGTTTGAAGATTTTGCCAATCGGAATGCATTTCGTCTCCTGAACAAGTATCGAAACAAGTATTGCACATTTAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS GCA 72 bp | TCTTGGCTTCCGGAATGCCAAACTGTACTGCTGGCATaGGAGGCCCACGGTGGGGGTGTAAACAATAGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: SWLPECQTVLLA*EAHGGGVNNRH Trigger: ATGCCTATTGTTTACACCCCCACCGTGGGCCTCGCATGCCAGCAGTACAGTTTGGCATTCCGGAAGCCAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS CCA 72 bp | GCCAGGAAACAGAGTCCGTCCATCTGGGAGAGTGACTaGATCAAAAGGACTGCCGCTGGCAAAGATTGCACG | + |
|
Preference number: 6 (lower is better) Translates to: ARKQSPSIWESD*IKRTAAGKDCT Trigger: CGTGCAATCTTTGCCAGCGGCAGTCCTTTTGATCCAGTCACTCTCCCAGATGGACGGACTCTGTTTCCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS CCA 72 bp | ATTGTTGCCTTGGCCAGGAAACAGAGTCCGTCCATCTaGGAGAGTGACTGGATCAAAAGGACTGCCGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: IVALARKQSPSI*ESDWIKRTAAG Trigger: GCCAGCGGCAGTCCTTTTGATCCAGTCACTCTCCCAGATGGACGGACTCTGTTTCCTGGCCAAGGCAACAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS TCA 72 bp | CTTGGCCAGGAAACAGAGTCCGTCCATCTGGGAGAGTaGCTGGATCAAAAGGACTGCCGCTGGCAAAGATTG | + |
|
Preference number: 6 (lower is better) Translates to: LGQETESVHLGE*LDQKDCRWQRL Trigger: CAATCTTTGCCAGCGGCAGTCCTTTTGATCCAGTCACTCTCCCAGATGGACGGACTCTGTTTCCTGGCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS GCA 72 bp | GATTGCACGTCCCTTGGTCACCTTGTAGCACTGCTCTaGAGAGCACTCCGCTTTGCTGGTCGGATTACTCAA | + |
|
Preference number: 6 (lower is better) Translates to: DCTSLGHLVALL*RALRFAGRITQ Trigger: TTGAGTAATCCGACCAGCAAAGCGGAGTGCTCTGCAGAGCAGTGCTACAAGGTGACCAAGGGACGTGCAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS CAA 72 bp | GGGCCGCTCGTTGAAGGCAGCCATATCCTTGAGAATTaGTTCAGTGAAAGCACCACCAATTGCAGCAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: GPLVEGSHILEN*FSESTTNCSNS Trigger: GGAGTTGCTGCAATTGGTGGTGCTTTCACTGAACAAATTCTCAAGGATATGGCTGCCTTCAACGAGCGGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS CCA 72 bp | GTGCCCTTTGTCATGGATACTAATAAAGAGGCCTCTTaGCTTCCGGAATGCCAAACTGTACTGCTGGCATGC | + |
|
Preference number: 6 (lower is better) Translates to: VPFVMDTNKEAS*LPECQTVLLAC Trigger: GCATGCCAGCAGTACAGTTTGGCATTCCGGAAGCCAAGAGGCCTCTTTATTAGTATCCATGACAAAGGGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS CAA 90 bp | AAAGATGATGGGCCGCTCGTTGAAGGCAGCCATATCCTTGAGAATTaGTTCAGTGAAAGCACCACCAATTGCAGCAACTCCTATGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: KDDGPLVEGSHILEN*FSESTTNCSNSYEG Trigger: GCCCTCATAGGAGTTGCTGCAATTGGTGGTGCTTTCACTGAACAAATTCTCAAGGATATGGCTGCCTTCAACGAGCGGCCCATCATCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS TCA 72 bp | AGCTCCTGGCTGATGATGCAGGGCGGCAACAATCCATaGATGTTCAACTGCTGTCTCTCTTCCAGAGTAAAA | + |
|
Preference number: 6 (lower is better) Translates to: SSWLMMQGGNNP*MFNCCLSSRVK Trigger: TTTTACTCTGGAAGAGAGACAGCAGTTGAACATTCATGGATTGTTGCCGCCCTGCATCATCAGCCAGGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS GCA 72 bp | CTGAATAAGGCAATTCATGCCATATTTGGAAGACGCTaGCTCCATGAACTCATCCAGGAAGGCGTCATACTC | + |
|
Preference number: 6 (lower is better) Translates to: LNKAIHAIFGRR*LHELIQEGVIL Trigger: GAGTATGACGCCTTCCTGGATGAGTTCATGGAGGCAGCGTCTTCCAAATATGGCATGAATTGCCTTATTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS CAA 72 bp | AAGATGATGGGCCGCTCGTTGAAGGCAGCCATATCCTaGAGAATTTGTTCAGTGAAAGCACCACCAATTGCA | + |
|
Preference number: 6 (lower is better) Translates to: KMMGRSLKAAIS*RICSVKAPPIA Trigger: TGCAATTGGTGGTGCTTTCACTGAACAAATTCTCAAGGATATGGCTGCCTTCAACGAGCGGCCCATCATCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS CCA 72 bp | TTCAGTCGTTCGAAATTCTTAATTATTCTAAGGACCTaGAGCTCCTGGCTGATGATGCAGGGCGGCAACAAT | + |
|
Preference number: 6 (lower is better) Translates to: FSRSKFLIILRT*SSWLMMQGGNN Trigger: ATTGTTGCCGCCCTGCATCATCAGCCAGGAGCTCCAGGTCCTTAGAATAATTAAGAATTTCGAACGACTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS CCA 72 bp | CAATCTTTACTGCAATTTTCAACGAAACGCCTCGAATaGTATTCAAAGGAGGATAGAGCCGGCCTTCTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: QSLLQFSTKRLE*YSKEDRAGLLA Trigger: TGCAAGAAGGCCGGCTCTATCCTCCTTTGAATACCATTCGAGGCGTTTCGTTGAAAATTGCAGTAAAGATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS CAA 90 bp | ACCACCAATTGCAGCAACTCCTATGAGGGCAGTTGGTTTTATCTTTaGAACAATGGCTTCCAGATTCTTCATTTCTTCATGTTCATGGGC | + |
|
Preference number: 6 (lower is better) Translates to: TTNCSNSYEGSWFYL*NNGFQILHFFMFMG Trigger: GCCCATGAACATGAAGAAATGAAGAATCTGGAAGCCATTGTTCAAAAGATAAAACCAACTGCCCTCATAGGAGTTGCTGCAATTGGTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS GCA 72 bp | ATCCTTGAGAATTTGTTCAGTGAAAGCACCACCAATTaGAGCAACTCCTATGAGGGCAGTTGGTTTTATCTT | + |
|
Preference number: 6 (lower is better) Translates to: ILENLFSESTTN*SNSYEGSWFYL Trigger: AAGATAAAACCAACTGCCCTCATAGGAGTTGCTGCAATTGGTGGTGCTTTCACTGAACAAATTCTCAAGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS CAA 90 bp | ATAATTAGTGCTGTACATCTGGGAGGAGACAAATTCTTCTTTGTTTaGGGGTTCAGGATAAACAGTGGCCATCTTTTCTTTGTATGCATC | + |
|
Preference number: 6 (lower is better) Translates to: IISAVHLGGDKFFFV*GFRINSGHLFFVCI Trigger: GATGCATACAAAGAAAAGATGGCCACTGTTTATCCTGAACCCCAAAACAAAGAAGAATTTGTCTCCTCCCAGATGTACAGCACTAATTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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| CDS CAA 72 bp | ATATCATCGTTAAATGTGCAATACTTGTTTCGATACTaGTTCAGGAGACGAAATGCATTCCGATTGGCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: ISSLNVQYLFRY*FRRRNAFRLAK Trigger: TTTTGCCAATCGGAATGCATTTCGTCTCCTGAACAAGTATCGAAACAAGTATTGCACATTTAACGATGATAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034989.15 ENSMUST00000185374.2 |
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