Pregenerated sensors for MDM2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020184Ensembl transcript IDs: ENSMUST00000020408.16, ENSMUST00000105263.9, ENSMUST00000155285.8
Found 192 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGCGCACGCGCGCGTGTGTGTGCGTGCATaGGTGCATCCATTTGAAGATCAGGGAACAACTTTGTGGAACTGG | + |
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Preference number: 1 (lower is better) Translates to: VCVCVCAHARVCVRA*VHPFEDQGTTLWNW Trigger: CCAGTTCCACAAAGTTGTTCCCTGATCTTCAAATGGATGCACGCATGCACGCACACACACGCGCGCGTGCGCACACACACACACACACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
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| 3UTR TCA 90 bp | TCCTGTCTGATAGACTGTGACCCGATAGACCTCATCATCCTCATCTaGGAGCTCGTGCCCTTCGTCACTCAGGCTGTAATCTTCCGAGTC | + |
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Preference number: 1 (lower is better) Translates to: SCLIDCDPIDLIILI*ELVPFVTQAVIFRV Trigger: GACTCGGAAGATTACAGCCTGAGTGACGAAGGGCACGAGCTCTCAGATGAGGATGATGAGGTCTATCGGGTCACAGTCTATCAGACAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
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| 3UTR GCA 90 bp | GGGGTTCCAAGGATCAAATGTGTGTCAGTGGGTGTACACAGCAGGTaGCTTTACTGGCTGAGTCTTCTCTGCAGCCCACAACTCACACAT | + |
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Preference number: 1 (lower is better) Translates to: GVPRIKCVSVGVHSR*LYWLSLLCSPQLTH Trigger: ATGTGTGAGTTGTGGGCTGCAGAGAAGACTCAGCCAGTAAAGGCACCTGCTGTGTACACCCACTGACACACATTTGATCCTTGGAACCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
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| 3UTR CCA 90 bp | GTGAACAATGCAGCCATTTTTAGGCCGCCCCTGGCAGATCACACATaGTTCGATGGCATTCAGGGAGAAGCTAGATTCCACACTCTCGTC | + |
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Preference number: 1 (lower is better) Translates to: VNNAAIFRPPLADHT*FDGIQGEARFHTLV Trigger: GACGAGAGTGTGGAATCTAGCTTCTCCCTGAATGCCATCGAACCATGTGTGATCTGCCAGGGGCGGCCTAAAAATGGCTGCATTGTTCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
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| 3UTR CCA 90 bp | CCTTCAACTCTTTCACGCTTTCTTGGCTGCTATAAACAATGCTGCTaGAAGTCGATGGTTGGGAATAGTCGTCACTCTCCTGGGACAGGG | + |
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Preference number: 1 (lower is better) Translates to: PSTLSRFLGCYKQCC*KSMVGNSRHSPGTG Trigger: CCCTGTCCCAGGAGAGTGACGACTATTCCCAACCATCGACTTCCAGCAGCATTGTTTATAGCAGCCAAGAAAGCGTGAAAGAGTTGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
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| 3UTR TCA 90 bp | CTCCTTCAAAAGAGTCTGTATCGCTTTCTCCTGTCTGATAGACTGTaGCCCGATAGACCTCATCATCCTCATCTGAGAGCTCGTGCCCTT | + |
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Preference number: 1 (lower is better) Translates to: LLQKSLYRFLLSDRL*PDRPHHPHLRARAL Trigger: AAGGGCACGAGCTCTCAGATGAGGATGATGAGGTCTATCGGGTCACAGTCTATCAGACAGGAGAAAGCGATACAGACTCTTTTGAAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
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| 3UTR GCA 90 bp | CCTTATCGTCTGGAAGCCAGTTCTCACGAAGGGTCCAGCATCTTTTaGAGTGTGATGGAAGGGGAGGATTCATTTCATTGCATGAGGTAC | + |
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Preference number: 1 (lower is better) Translates to: PYRLEASSHEGSSIF*SVMEGEDSFHCMRY Trigger: GTACCTCATGCAATGAAATGAATCCTCCCCTTCCATCACACTGCAAAAGATGCTGGACCCTTCGTGAGAACTGGCTTCCAGACGATAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
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| 3UTR GCA 90 bp | CCTCCTTCAACTCTTTCACGCTTTCTTGGCTGCTATAAACAATGCTaGTGGAAGTCGATGGTTGGGAATAGTCGTCACTCTCCTGGGACA | + |
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Preference number: 1 (lower is better) Translates to: PPSTLSRFLGCYKQC*WKSMVGNSRHSPGT Trigger: TGTCCCAGGAGAGTGACGACTATTCCCAACCATCGACTTCCAGCAGCATTGTTTATAGCAGCCAAGAAAGCGTGAAAGAGTTGAAGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
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| 3UTR GCA 90 bp | TTTCCTCCTTCAACTCTTTCACGCTTTCTTGGCTGCTATAAACAATaGTGCTGGAAGTCGATGGTTGGGAATAGTCGTCACTCTCCTGGG | + |
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Preference number: 1 (lower is better) Translates to: FPPSTLSRFLGCYKQ*CWKSMVGNSRHSPG Trigger: CCCAGGAGAGTGACGACTATTCCCAACCATCGACTTCCAGCAGCATTGTTTATAGCAGCCAAGAAAGCGTGAAAGAGTTGAAGGAGGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
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| 3UTR GCA 90 bp | CTTTGTCCTGCGTTTCCTCCTTCAACTCTTTCACGCTTTCTTGGCTaGTATAAACAATGCTGCTGGAAGTCGATGGTTGGGAATAGTCGT | + |
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Preference number: 1 (lower is better) Translates to: LCPAFPPSTLSRFLG*YKQCCWKSMVGNSR Trigger: ACGACTATTCCCAACCATCGACTTCCAGCAGCATTGTTTATAGCAGCCAAGAAAGCGTGAAAGAGTTGAAGGAGGAAACGCAGGACAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
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| 3UTR CCA 90 bp | AGGATCAAATGTGTGTCAGTGGGTGTACACAGCAGGTGCCTTTACTaGCTGAGTCTTCTCTGCAGCCCACAACTCACACATTTTAGATTA | + |
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Preference number: 1 (lower is better) Translates to: RIKCVSVGVHSRCLY*LSLLCSPQLTHFRL Trigger: TAATCTAAAATGTGTGAGTTGTGGGCTGCAGAGAAGACTCAGCCAGTAAAGGCACCTGCTGTGTACACCCACTGACACACATTTGATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
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| 3UTR GCA 90 bp | TCAGTGGGTGTACACAGCAGGTGCCTTTACTGGCTGAGTCTTCTCTaGAGCCCACAACTCACACATTTTAGATTACTACAGTTTCAGAAT | + |
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Preference number: 1 (lower is better) Translates to: SVGVHSRCLYWLSLL*SPQLTHFRLLQFQN Trigger: ATTCTGAAACTGTAGTAATCTAAAATGTGTGAGTTGTGGGCTGCAGAGAAGACTCAGCCAGTAAAGGCACCTGCTGTGTACACCCACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
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| 3UTR GCA 90 bp | TCCAGCATCTTTTGCAGTGTGATGGAAGGGGAGGATTCATTTCATTaGATGAGGTACACTTCCAATAGTCAGCTAAGGAAATCTCAGGAT | + |
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Preference number: 1 (lower is better) Translates to: SSIFCSVMEGEDSFH*MRYTSNSQLRKSQD Trigger: ATCCTGAGATTTCCTTAGCTGACTATTGGAAGTGTACCTCATGCAATGAAATGAATCCTCCCCTTCCATCACACTGCAAAAGATGCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
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| 3UTR TCA 90 bp | TATTCAAATGCTGTCACGTGGGAGGAGTGTTCTTGTTCTTGTCTCTaGAGCTTTAACGCAACATTAATACAAAGCTATCCTTCGCTTCCT | + |
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Preference number: 1 (lower is better) Translates to: YSNAVTWEECSCSCL*SFNATLIQSYPSLP Trigger: AGGAAGCGAAGGATAGCTTTGTATTAATGTTGCGTTAAAGCTTCAGAGACAAGAACAAGAACACTCCTCCCACGTGACAGCATTTGAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
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| 3UTR-3UTR CCA 90 bp | GGGACTGAAGCTGCCCAGGCTGCCGCACCCACCGCCTCCTATTCAAATGCTGTCGCGAGGGCGTCTCTGTaGACTCGCTGCTGCTGCTGC | + |
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Preference number: 2 (lower is better) Translates to: GTEAAQAAAPTASYSNAVARASL*TRCCCC Trigger: GCAGCAGCAGCAGCGAGTCCACAGAGACGCCCTCGC...GACAGCATTTGAATAGGAGGCGGTGGGTGCGGCAGCCTGGGCAGCTTCAGTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
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| 3UTR-3UTR GCA 90 bp | GGGACTGAAGCTGCCCAGGCTGCCGCACCCACCGCCTCCTATTCAAATGCTGTCAGGTCCACCATCATCTaGAGGAGATGGAAAGGACTT | + |
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Preference number: 2 (lower is better) Translates to: GTEAAQAAAPTASYSNAVRSTII*RRWKGL Trigger: AAGTCCTTTCCATCTCCTGCAGATGATGGTGGACCT...GACAGCATTTGAATAGGAGGCGGTGGGTGCGGCAGCCTGGGCAGCTTCAGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
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| 3UTR-3UTR GCA 90 bp | CCCACCGCCTCCTATTCAAATGCTGTCACGTGGGAGGAGTGTTCTTGTTCTTGTTGCTGCTACTGCTGCTaGTGCCGCCGCTGCACATCT | + |
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Preference number: 2 (lower is better) Translates to: PTASYSNAVTWEECSCSCCCYCC*CRRCTS Trigger: AGATGTGCAGCGGCGGCAGCAGCAGCAGTAGCAGCA...ACAAGAACAAGAACACTCCTCCCACGTGACAGCATTTGAATAGGAGGCGGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
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| 3UTR CAA 90 bp | CACGCTTTCTTGGCTGCTATAAACAATGCTGCTGGAAGTCGATGGTaGGGAATAGTCGTCACTCTCCTGGGACAGGGGCGTCTGTTCGGC | + |
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Preference number: 2 (lower is better) Translates to: HAFLAAINNAAGSRW*GIVVTLLGQGRLFG Trigger: GCCGAACAGACGCCCCTGTCCCAGGAGAGTGACGACTATTCCCAACCATCGACTTCCAGCAGCATTGTTTATAGCAGCCAAGAAAGCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
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| 3UTR-3UTR TCA 90 bp | CCACCGCCTCCTATTCAAATGCTGTCACGTGGGAGGAGTGTTCTTGTTCTTGTCGGTGCCTTTACTGGCTaGGTCTTCTCTGCAGCCCAC | + |
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Preference number: 2 (lower is better) Translates to: PPPPIQMLSRGRSVLVLVGAFTG*VFSAAH Trigger: GTGGGCTGCAGAGAAGACTCAGCCAGTAAAGGCACC...GACAAGAACAAGAACACTCCTCCCACGTGACAGCATTTGAATAGGAGGCGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
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| 3UTR-3UTR CCA 90 bp | AAATCGGGACTGAAGCTGCCCAGGCTGCCGCACCCACCGCCTCCTATTCAAATGGTCCTCCTCAGCACATaGCTCTTTAGCATCATTCTC | + |
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Preference number: 2 (lower is better) Translates to: KSGLKLPRLPHPPPPIQMVLLST*LFSIIL Trigger: GAGAATGATGCTAAAGAGCCATGTGCTGAGGAGGAC...CATTTGAATAGGAGGCGGTGGGTGCGGCAGCCTGGGCAGCTTCAGTCCCGATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
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| 3UTR-3UTR TCA 90 bp | AAAAGGCGCTTCTACCAGCCTCAGGCTTTTCAACCTGGGACAAACTGCAACACTATTGTAAATCGGGACTaGAGCTGCCCAGGCTGCCGC | + |
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Preference number: 2 (lower is better) Translates to: KRRFYQPQAFQPGTNCNTIVNRD*SCPGCR Trigger: GCGGCAGCCTGGGCAGCTTCAGTCCCGATTTACAAT...AGTGTTGCAGTTTGTCCCAGGTTGAAAAGCCTGAGGCTGGTAGAAGCGCCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
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| 3UTR-3UTR GCA 90 bp | AAAAGGCGCTTCTACCAGCCTCAGGCTTTTCAACCTGGGACAAACTGCAACACTTCTCTGTGGACTCGCTaGTGCTGCTGCTACTGCTGC | + |
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Preference number: 2 (lower is better) Translates to: KRRFYQPQAFQPGTNCNTSLWTR*CCCYCC Trigger: GCAGCAGTAGCAGCAGCAGCAGCGAGTCCACAGAGA...AGTGTTGCAGTTTGTCCCAGGTTGAAAAGCCTGAGGCTGGTAGAAGCGCCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
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| 3UTR-3UTR TCA 90 bp | GGGACTGAAGCTGCCCAGGCTGCCGCACCCACCGCCTCCTATTCAAATGCTGTCCCTATGACAAAAAGCTaGAAATGCTGGAAAATAAGG | + |
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Preference number: 2 (lower is better) Translates to: GTEAAQAAAPTASYSNAVPMTKS*KCWKIR Trigger: CCTTATTTTCCAGCATTTTCAGCTTTTTGTCATAGG...GACAGCATTTGAATAGGAGGCGGTGGGTGCGGCAGCCTGGGCAGCTTCAGTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
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| 3UTR-3UTR TCA 90 bp | AAATCGGGACTGAAGCTGCCCAGGCTGCCGCACCCACCGCCTCCTATTCAAATGCTGATTCAGTCTTTCTaGATGGGCTGGTTTCTAAAC | + |
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Preference number: 2 (lower is better) Translates to: KSGLKLPRLPHPPPPIQMLIQSF*MGWFLN Trigger: GTTTAGAAACCAGCCCATTCAGAAAGACTGAATCAG...CATTTGAATAGGAGGCGGTGGGTGCGGCAGCCTGGGCAGCTTCAGTCCCGATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
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| 3UTR-3UTR TCA 90 bp | AAAAGGCGCTTCTACCAGCCTCAGGCTTTTCAACCTGGGACAAACTGCAACACTCTCATCATCCTCATCTaGGAGCTCGTGCCCTTCGTC | + |
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Preference number: 2 (lower is better) Translates to: KRRFYQPQAFQPGTNCNTLIILI*ELVPFV Trigger: GACGAAGGGCACGAGCTCTCAGATGAGGATGATGAG...AGTGTTGCAGTTTGTCCCAGGTTGAAAAGCCTGAGGCTGGTAGAAGCGCCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
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| 3UTR-3UTR GCA 90 bp | CCACCGCCTCCTATTCAAATGCTGTCACGTGGGAGGAGTGTTCTTGTTCTTGTCCAACCTGGGACAAACTaGAACACTTGTGCCACACCC | + |
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Preference number: 2 (lower is better) Translates to: PPPPIQMLSRGRSVLVLVQPGTN*NTCATP Trigger: GGGTGTGGCACAAGTGTTGCAGTTTGTCCCAGGTTG...GACAAGAACAAGAACACTCCTCCCACGTGACAGCATTTGAATAGGAGGCGGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
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| 3UTR-3UTR GCA 90 bp | AGTACTTCTGTAGCCCTTGATGAGGAAGGTCCACCATCATCTGCAGGAGATGGATCATCTGAGAGCTCGTaGCCTTCGTCACTCAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: STSVALDEEGPPSSAGDGSSESS*PSSLRL Trigger: CAGCCTGAGTGACGAAGGGCACGAGCTCTCAGATGA...TCCATCTCCTGCAGATGATGGTGGACCTTCCTCATCAAGGGCTACAGAAGTACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTGGGGGTTCCAAGGATCAAATGTGTGTCAGTGGGTGTACACAGCAGGTGCCTTTCCCCTTATCGTCTaGAAGCCAGTTCTCACGAAG | + |
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Preference number: 2 (lower is better) Translates to: SWGFQGSNVCQWVYTAGAFPLIV*KPVLTK Trigger: CTTCGTGAGAACTGGCTTCCAGACGATAAGGGGAAA...GGCACCTGCTGTGTACACCCACTGACACACATTTGATCCTTGGAACCCCCAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
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| 3UTR-3UTR GCA 90 bp | CCACCGCCTCCTATTCAAATGCTGTCACGTGGGAGGAGTGTTCTTGTTCTTGTCTGGCTGAGTCTTCTCTaGAGCCCACAACTCACACAT | + |
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Preference number: 2 (lower is better) Translates to: PPPPIQMLSRGRSVLVLVWLSLL*SPQLTH Trigger: ATGTGTGAGTTGTGGGCTGCAGAGAAGACTCAGCCA...GACAAGAACAAGAACACTCCTCCCACGTGACAGCATTTGAATAGGAGGCGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
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| 3UTR-3UTR CCA 90 bp | CCACCGCCTCCTATTCAAATGCTGTCACGTGGGAGGAGTGTTCTTGTTCTTGTCTGGCTGTCTGCACACTaGGCAGGGCTTGTTTCTTTT | + |
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Preference number: 2 (lower is better) Translates to: PPPPIQMLSRGRSVLVLVWLSAH*AGLVSF Trigger: AAAAGAAACAAGCCCTGCCCAGTGTGCAGACAGCCA...GACAAGAACAAGAACACTCCTCCCACGTGACAGCATTTGAATAGGAGGCGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
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| 3UTR-3UTR TCA 90 bp | ACGGAGCTGAGGCAAAAAGGCGCTTCTACCAGCCTCAGGCTTTTCAACCTGGGAATGCGTGCATCCATTTaGAGATCAGGGAACAACTTT | + |
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Preference number: 2 (lower is better) Translates to: TELRQKGASTSLRLFNLGMRASI*RSGNNF Trigger: AAAGTTGTTCCCTGATCTTCAAATGGATGCACGCAT...TCCCAGGTTGAAAAGCCTGAGGCTGGTAGAAGCGCCTTTTTGCCTCAGCTCCGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGTACTTTATTGTAAATCGGGACTGAAGCTGCCCAGGCTGCCGCACCCACCGAAACTGATCAGAAACTaGATCCTGATCCAGGCAATC | + |
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Preference number: 2 (lower is better) Translates to: KVLYCKSGLKLPRLPHPPKLIRN*ILIQAI Trigger: GATTGCCTGGATCAGGATTCAGTTTCTGATCAGTTT...CGGTGGGTGCGGCAGCCTGGGCAGCTTCAGTCCCGATTTACAATAAAGTACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGTACTTTATTGTAAATCGGGACTGAAGCTGCCCAGGCTGCCGCACCCACCGAGCAGGTCAGCTAGTTaGAGTAAGTTAGCACAATCA | + |
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Preference number: 2 (lower is better) Translates to: KVLYCKSGLKLPRLPHPPSRSAS*SKLAQS Trigger: TGATTGTGCTAACTTACTTCAACTAGCTGACCTGCT...CGGTGGGTGCGGCAGCCTGGGCAGCTTCAGTCCCGATTTACAATAAAGTACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
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| 3UTR-3UTR GCA 90 bp | GGCAAAAAGGCGCTTCTACCAGCCTCAGGCTTTTCAACCTGGGACAAACTGCAAAGGTCCACCATCATCTaGAGGAGATGGAAAGGACTT | + |
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Preference number: 2 (lower is better) Translates to: GKKALLPASGFSTWDKLQRSTII*RRWKGL Trigger: AAGTCCTTTCCATCTCCTGCAGATGATGGTGGACCT...TTGCAGTTTGTCCCAGGTTGAAAAGCCTGAGGCTGGTAGAAGCGCCTTTTTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
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| 3UTR-3UTR GCA 90 bp | CCCACCGCCTCCTATTCAAATGCTGTCACGTGGGAGGAGTGTTCTTGTTCTTGTGTGTGTGTGCGTGCATaGGTGCATCCATTTGAAGAT | + |
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Preference number: 2 (lower is better) Translates to: PTASYSNAVTWEECSCSCVCVRA*VHPFED Trigger: ATCTTCAAATGGATGCACGCATGCACGCACACACAC...ACAAGAACAAGAACACTCCTCCCACGTGACAGCATTTGAATAGGAGGCGGTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
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| 3UTR-3UTR GCA 90 bp | TGTACACAGCAGGTGCCTTTACTGGCTGAGTCTTCTCTGCAGCCCACAACTCACGGCTGCTATAAACAATaGTGCTGGAAGTCGATGGTT | + |
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Preference number: 2 (lower is better) Translates to: CTQQVPLLAESSLQPTTHGCYKQ*CWKSMV Trigger: AACCATCGACTTCCAGCAGCATTGTTTATAGCAGCC...GTGAGTTGTGGGCTGCAGAGAAGACTCAGCCAGTAAAGGCACCTGCTGTGTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAAAAAGGCGCTTCTACCAGCCTCAGGCTTTTCAACCTGGGACAAACTGCAAACAACTTTGTGGAACTaGTTCACTCTTCCTGGGGGT | + |
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Preference number: 2 (lower is better) Translates to: GKKALLPASGFSTWDKLQTTLWN*FTLPGG Trigger: ACCCCCAGGAAGAGTGAACCAGTTCCACAAAGTTGT...TTGCAGTTTGTCCCAGGTTGAAAAGCCTGAGGCTGGTAGAAGCGCCTTTTTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
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| 3UTR CAA 90 bp | TGTGTGCGTGCATGCGTGCATCCATTTGAAGATCAGGGAACAACTTaGTGGAACTGGTTCACTCTTCCTGGGGGTTCCAAGGATCAAATG | + |
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Preference number: 2 (lower is better) Translates to: CVRACVHPFEDQGTT*WNWFTLPGGSKDQM Trigger: CATTTGATCCTTGGAACCCCCAGGAAGAGTGAACCAGTTCCACAAAGTTGTTCCCTGATCTTCAAATGGATGCACGCATGCACGCACACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
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| 3UTR CAA 90 bp | CCCTTATCGTCTGGAAGCCAGTTCTCACGAAGGGTCCAGCATCTTTaGCAGTGTGATGGAAGGGGAGGATTCATTTCATTGCATGAGGTA | + |
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Preference number: 2 (lower is better) Translates to: PLSSGSQFSRRVQHL*QCDGRGGFISLHEV Trigger: TACCTCATGCAATGAAATGAATCCTCCCCTTCCATCACACTGCAAAAGATGCTGGACCCTTCGTGAGAACTGGCTTCCAGACGATAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
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| 3UTR-3UTR TCA 90 bp | TGTACACAGCAGGTGCCTTTACTGGCTGAGTCTTCTCTGCAGCCCACAACTCACGGAAGAGGCCTATTATaGACCAGGAGATTAATCTAC | + |
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Preference number: 2 (lower is better) Translates to: CTQQVPLLAESSLQPTTHGRGLL*TRRLIY Trigger: GTAGATTAATCTCCTGGTTCATAATAGGCCTCTTCC...GTGAGTTGTGGGCTGCAGAGAAGACTCAGCCAGTAAAGGCACCTGCTGTGTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
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| 3UTR-3UTR TCA 90 bp | CCCACCGCCTCCTATTCAAATGCTGTCACGTGGGAGGAGTGTTCTTGTTCTTGTTCAGAAACTGAATCCTaGTCCAGGCAATCACCAGAA | + |
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Preference number: 2 (lower is better) Translates to: PTASYSNAVTWEECSCSCSETES*SRQSPE Trigger: TTCTGGTGATTGCCTGGATCAGGATTCAGTTTCTGA...ACAAGAACAAGAACACTCCTCCCACGTGACAGCATTTGAATAGGAGGCGGTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
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| 3UTR-3UTR TCA 90 bp | AGTACTTCTGTAGCCCTTGATGAGGAAGGTCCACCATCATCTGCAGGAGATGGAGCATCTTTTGCAGTGTaGTGGAAGGGGAGGATTCAT | + |
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Preference number: 2 (lower is better) Translates to: STSVALDEEGPPSSAGDGASFAV*WKGRIH Trigger: ATGAATCCTCCCCTTCCATCACACTGCAAAAGATGC...TCCATCTCCTGCAGATGATGGTGGACCTTCCTCATCAAGGGCTACAGAAGTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
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| 3UTR-3UTR GCA 90 bp | TACATACCACCAGATGCAATTCATGCCTTTAAAACTGTGTGTGTGTGTGTGTGTCTGTGGACTCGCTGCTaGTGCTGCTACTGCTGCTGC | + |
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Preference number: 2 (lower is better) Translates to: YIPPDAIHAFKTVCVCVCLWTRC*CCYCCC Trigger: GCAGCAGCAGTAGCAGCAGCAGCAGCGAGTCCACAG...ACACACACACACACACACAGTTTTAAAGGCATGAATTGCATCTGGTGGTATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAAAAAGGCGCTTCTACCAGCCTCAGGCTTTTCAACCTGGGACAAACTGCAACAGGGAACAACTTTGTaGAACTGGTTCACTCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: GKKALLPASGFSTWDKLQQGTTL*NWFTLP Trigger: AGGAAGAGTGAACCAGTTCCACAAAGTTGTTCCCTG...TTGCAGTTTGTCCCAGGTTGAAAAGCCTGAGGCTGGTAGAAGCGCCTTTTTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
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| 3UTR-3UTR CCA 90 bp | CACAAGGTACTTTATTGTAAATCGGGACTGAAGCTGCCCAGGCTGCCGCACCCAGTTAGCACAATCATTTaGATTGGCTGTCTGCACACT | + |
|
Preference number: 2 (lower is better) Translates to: HKVLYCKSGLKLPRLPHPVSTII*IGCLHT Trigger: AGTGTGCAGACAGCCAATCCAAATGATTGTGCTAAC...TGGGTGCGGCAGCCTGGGCAGCTTCAGTCCCGATTTACAATAAAGTACCTTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGAAAGGACTTCTCACATACACTTCCAAAGTCCTTCCAAGCGGAGATTATTTAGGTGCCTTTACTGGCTaGGTCTTCTCTGCAGCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: WKGLLTYTSKVLPSGDYLGAFTG*VFSAAH Trigger: GTGGGCTGCAGAGAAGACTCAGCCAGTAAAGGCACC...TAAATAATCTCCGCTTGGAAGGACTTTGGAAGTGTATGTGAGAAGTCCTTTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| 3UTR-3UTR TCA 90 bp | CCACCGCCTCCTATTCAAATGCTGTCACGTGGGAGGAGTGTTCTTGTTCTTGTCATGCGTGCATCCATTTaGAGATCAGGGAACAACTTT | + |
|
Preference number: 2 (lower is better) Translates to: PPPPIQMLSRGRSVLVLVMRASI*RSGNNF Trigger: AAAGTTGTTCCCTGATCTTCAAATGGATGCACGCAT...GACAAGAACAAGAACACTCCTCCCACGTGACAGCATTTGAATAGGAGGCGGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGGTACTTTATTGTAAATCGGGACTGAAGCTGCCCAGGCTGCCGCACCCACCGCCTATGACAAAAAGCTaGAAATGCTGGAAAATAAGG | + |
|
Preference number: 2 (lower is better) Translates to: KVLYCKSGLKLPRLPHPPPMTKS*KCWKIR Trigger: CCTTATTTTCCAGCATTTTCAGCTTTTTGTCATAGG...CGGTGGGTGCGGCAGCCTGGGCAGCTTCAGTCCCGATTTACAATAAAGTACCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| 3UTR-3UTR CCA 90 bp | CACAAGGTACTTTATTGTAAATCGGGACTGAAGCTGCCCAGGCTGCCGCACCCATATAAACAATGCTGCTaGAAGTCGATGGTTGGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: HKVLYCKSGLKLPRLPHPYKQCC*KSMVGN Trigger: ATTCCCAACCATCGACTTCCAGCAGCATTGTTTATA...TGGGTGCGGCAGCCTGGGCAGCTTCAGTCCCGATTTACAATAAAGTACCTTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
||
| 3UTR CAA 90 bp | CTCGTCTTTGTCCTGCGTTTCCTCCTTCAACTCTTTCACGCTTTCTaGGCTGCTATAAACAATGCTGCTGGAAGTCGATGGTTGGGAATA | + |
|
Preference number: 2 (lower is better) Translates to: LVFVLRFLLQLFHAF*AAINNAAGSRWLGI Trigger: TATTCCCAACCATCGACTTCCAGCAGCATTGTTTATAGCAGCCAAGAAAGCGTGAAAGAGTTGAAGGAGGAAACGCAGGACAAAGACGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
||
| 3UTR-3UTR TCA 90 bp | ACAGTTTTATGTTTTCTATACTTAGACGTGACCCTTCAATCAAAGGGAAGAGGCGGTGCCTTTACTGGCTaGGTCTTCTCTGCAGCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: TVLCFLYLDVTLQSKGRGGAFTG*VFSAAH Trigger: GTGGGCTGCAGAGAAGACTCAGCCAGTAAAGGCACC...GCCTCTTCCCTTTGATTGAAGGGTCACGTCTAAGTATAGAAAACATAAAACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| 3UTR-3UTR TCA 90 bp | CACAAGGTACTTTATTGTAAATCGGGACTGAAGCTGCCCAGGCTGCCGCACCCACCTATGACAAAAAGCTaGAAATGCTGGAAAATAAGG | + |
|
Preference number: 2 (lower is better) Translates to: HKVLYCKSGLKLPRLPHPPMTKS*KCWKIR Trigger: CCTTATTTTCCAGCATTTTCAGCTTTTTGTCATAGG...TGGGTGCGGCAGCCTGGGCAGCTTCAGTCCCGATTTACAATAAAGTACCTTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| 3UTR-3UTR TCA 90 bp | AGTACTTCTGTAGCCCTTGATGAGGAAGGTCCACCATCATCTGCAGGAGATGGAGGAAGAGGCCTATTATaGACCAGGAGATTAATCTAC | + |
|
Preference number: 2 (lower is better) Translates to: STSVALDEEGPPSSAGDGGRGLL*TRRLIY Trigger: GTAGATTAATCTCCTGGTTCATAATAGGCCTCTTCC...TCCATCTCCTGCAGATGATGGTGGACCTTCCTCATCAAGGGCTACAGAAGTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| 3UTR-3UTR TCA 90 bp | AATGGGCTGGTTTCTAAACCTAGCCTAAGTACAGGCCTGAAACATAGGCAACCATGCACACGTGAAACATaGCATGAGGTGTCCAGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: NGLVSKPSLSTGLKHRQPCTRET*HEVSSL Trigger: AAGACTGGACACCTCATGTCATGTTTCACGTGTGCA...TGGTTGCCTATGTTTCAGGCCTGTACTTAGGCTAGGTTTAGAAACCAGCCCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
||
| 3UTR-3UTR GCA 90 bp | AATGGGCTGGTTTCTAAACCTAGCCTAAGTACAGGCCTGAAACATAGGCAACCATCTCTGTCAGCTTTTTaGCATCAGGCACATCCAAGC | + |
|
Preference number: 2 (lower is better) Translates to: NGLVSKPSLSTGLKHRQPSLSAF*HQAHPS Trigger: GCTTGGATGTGCCTGATGGCAAAAAGCTGACAGAGA...TGGTTGCCTATGTTTCAGGCCTGTACTTAGGCTAGGTTTAGAAACCAGCCCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
||
| 3UTR-3UTR GCA 90 bp | AATGGGCTGGTTTCTAAACCTAGCCTAAGTACAGGCCTGAAACATAGGCAACCACTCTCGTCTTTGTCCTaGGTTTCCTCCTTCAACTCT | + |
|
Preference number: 2 (lower is better) Translates to: NGLVSKPSLSTGLKHRQPLSSLS*VSSFNS Trigger: AGAGTTGAAGGAGGAAACGCAGGACAAAGACGAGAG...TGGTTGCCTATGTTTCAGGCCTGTACTTAGGCTAGGTTTAGAAACCAGCCCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
||
| 3UTR-3UTR TCA 90 bp | CCACCGCCTCCTATTCAAATGCTGTCACGTGGGAGGAGTGTTCTTGTTCTTGTCCGAGTCATCTTAGAATaGGTTCACTTTATCCATGTT | + |
|
Preference number: 2 (lower is better) Translates to: PPPPIQMLSRGRSVLVLVRVILE*VHFIHV Trigger: AACATGGATAAAGTGAACTCATTCTAAGATGACTCG...GACAAGAACAAGAACACTCCTCCCACGTGACAGCATTTGAATAGGAGGCGGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| 3UTR-3UTR TCA 90 bp | TTATGTTTTCTATACTTAGACGTGACCCTTCAATCAAAGGGAAGAGGCCTATTAATTGTAAATCGGGACTaGAGCTGCCCAGGCTGCCGC | + |
|
Preference number: 2 (lower is better) Translates to: LCFLYLDVTLQSKGRGLLIVNRD*SCPGCR Trigger: GCGGCAGCCTGGGCAGCTTCAGTCCCGATTTACAAT...TAATAGGCCTCTTCCCTTTGATTGAAGGGTCACGTCTAAGTATAGAAAACATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| 3UTR-3UTR GCA 90 bp | GATGAGGAAGGTCCACCATCATCTGCAGGAGATGGAAAGGACTTCTCACATACAAAACTGCAACACTTGTaGCACACCCCTATGACAAAA | + |
|
Preference number: 2 (lower is better) Translates to: DEEGPPSSAGDGKDFSHTKLQHL*HTPMTK Trigger: TTTTGTCATAGGGGTGTGGCACAAGTGTTGCAGTTT...TGTATGTGAGAAGTCCTTTCCATCTCCTGCAGATGATGGTGGACCTTCCTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| 3UTR-3UTR TCA 90 bp | CCGCCTCCTATTCAAATGCTGTCACGTGGGAGGAGTGTTCTTGTTCTTGTCTCTACTTTATCCATGTTCTaGTTCAGTCTTTCTGAATGG | + |
|
Preference number: 2 (lower is better) Translates to: PPPIQMLSRGRSVLVLVSTLSMF*FSLSEW Trigger: CCATTCAGAAAGACTGAATCAGAACATGGATAAAGT...AGAGACAAGAACAAGAACACTCCTCCCACGTGACAGCATTTGAATAGGAGGCGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| 3UTR-3UTR TCA 90 bp | AAAAGGCGCTTCTACCAGCCTCAGGCTTTTCAACCTGGGACAAACTGCAACACTACTTTATCCATGTTCTaGTTCAGTCTTTCTGAATGG | + |
|
Preference number: 2 (lower is better) Translates to: KRRFYQPQAFQPGTNCNTTLSMF*FSLSEW Trigger: CCATTCAGAAAGACTGAATCAGAACATGGATAAAGT...AGTGTTGCAGTTTGTCCCAGGTTGAAAAGCCTGAGGCTGGTAGAAGCGCCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| 3UTR-3UTR TCA 90 bp | AAAAGGCGCTTCTACCAGCCTCAGGCTTTTCAACCTGGGACAAACTGCAACACTCGAGTCATCTTAGAATaGGTTCACTTTATCCATGTT | + |
|
Preference number: 2 (lower is better) Translates to: KRRFYQPQAFQPGTNCNTRVILE*VHFIHV Trigger: AACATGGATAAAGTGAACTCATTCTAAGATGACTCG...AGTGTTGCAGTTTGTCCCAGGTTGAAAAGCCTGAGGCTGGTAGAAGCGCCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| 3UTR-3UTR TCA 90 bp | GATGAGGAAGGTCCACCATCATCTGCAGGAGATGGAAAGGACTTCTCACATACACGAGTCATCTTAGAATaGGTTCACTTTATCCATGTT | + |
|
Preference number: 2 (lower is better) Translates to: DEEGPPSSAGDGKDFSHTRVILE*VHFIHV Trigger: AACATGGATAAAGTGAACTCATTCTAAGATGACTCG...TGTATGTGAGAAGTCCTTTCCATCTCCTGCAGATGATGGTGGACCTTCCTCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| 3UTR-3UTR GCA 90 bp | GTTTTCACTTACATACCACCAGATGCAATTCATGCCTTTAAAACTGTGTGTGTGTGGCTGAGTCTTCTCTaGAGCCCACAACTCACACAT | + |
|
Preference number: 2 (lower is better) Translates to: VFTYIPPDAIHAFKTVCVWLSLL*SPQLTH Trigger: ATGTGTGAGTTGTGGGCTGCAGAGAAGACTCAGCCA...CACACACACAGTTTTAAAGGCATGAATTGCATCTGGTGGTATGTAAGTGAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTATGTTTTCTATACTTAGACGTGACCCTTCAATCAAAGGGAAGAGGCCTATTCAACCTGGGACAAACTaGAACACTTGTGCCACACCC | + |
|
Preference number: 2 (lower is better) Translates to: FMFSILRRDPSIKGKRPIQPGTN*NTCATP Trigger: GGGTGTGGCACAAGTGTTGCAGTTTGTCCCAGGTTG...AATAGGCCTCTTCCCTTTGATTGAAGGGTCACGTCTAAGTATAGAAAACATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTTACAGTTTTATGTTTTCTATACTTAGACGTGACCCTTCAATCAAAGGGAAGCAACCTGGGACAAACTaGAACACTTGTGCCACACCC | + |
|
Preference number: 2 (lower is better) Translates to: PYSFMFSILRRDPSIKGKQPGTN*NTCATP Trigger: GGGTGTGGCACAAGTGTTGCAGTTTGTCCCAGGTTG...CTTCCCTTTGATTGAAGGGTCACGTCTAAGTATAGAAAACATAAAACTGTAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGAAAGGACTTCTCACATACACTTCCAAAGTCCTTCCAAGCGGAGATTATTTAACAACTTTGTGGAACTaGTTCACTCTTCCTGGGGGT | + |
|
Preference number: 2 (lower is better) Translates to: WKGLLTYTSKVLPSGDYLTTLWN*FTLPGG Trigger: ACCCCCAGGAAGAGTGAACCAGTTCCACAAAGTTGT...TAAATAATCTCCGCTTGGAAGGACTTTGGAAGTGTATGTGAGAAGTCCTTTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| 3UTR-3UTR GCA 90 bp | GTTTTCACTTACATACCACCAGATGCAATTCATGCCTTTAAAACTGTGTGTGTGAGGTCCACCATCATCTaGAGGAGATGGAAAGGACTT | + |
|
Preference number: 2 (lower is better) Translates to: VFTYIPPDAIHAFKTVCVRSTII*RRWKGL Trigger: AAGTCCTTTCCATCTCCTGCAGATGATGGTGGACCT...CACACACACAGTTTTAAAGGCATGAATTGCATCTGGTGGTATGTAAGTGAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| 3UTR-3UTR GCA 90 bp | GTTTTCACTTACATACCACCAGATGCAATTCATGCCTTTAAAACTGTGTGTGTGGTGTGTGTGCGTGCATaGGTGCATCCATTTGAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: VFTYIPPDAIHAFKTVCVVCVRA*VHPFED Trigger: ATCTTCAAATGGATGCACGCATGCACGCACACACAC...CACACACACAGTTTTAAAGGCATGAATTGCATCTGGTGGTATGTAAGTGAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| 3UTR-3UTR GCA 90 bp | GCGTGTGTTTTCACTTACATACCACCAGATGCAATTCATGCCTTTAAAACTGTGAAACTGCAACACTTGTaGCACACCCCTATGACAAAA | + |
|
Preference number: 2 (lower is better) Translates to: ACVFTYIPPDAIHAFKTVKLQHL*HTPMTK Trigger: TTTTGTCATAGGGGTGTGGCACAAGTGTTGCAGTTT...CACAGTTTTAAAGGCATGAATTGCATCTGGTGGTATGTAAGTGAAAACACACGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTTTCACTTACATACCACCAGATGCAATTCATGCCTTTAAAACTGTGTGTGTGCAGGGAACAACTTTGTaGAACTGGTTCACTCTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: VFTYIPPDAIHAFKTVCVQGTTL*NWFTLP Trigger: AGGAAGAGTGAACCAGTTCCACAAAGTTGTTCCCTG...CACACACACAGTTTTAAAGGCATGAATTGCATCTGGTGGTATGTAAGTGAAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| 3UTR-3UTR GCA 90 bp | AACGCAACATTAATACAAAGCTATCCTTCGCTTCCTCTACCTTACAGTTTTATGAAACTGCAACACTTGTaGCACACCCCTATGACAAAA | + |
|
Preference number: 2 (lower is better) Translates to: NATLIQSYPSLPLPYSFMKLQHL*HTPMTK Trigger: TTTTGTCATAGGGGTGTGGCACAAGTGTTGCAGTTT...CATAAAACTGTAAGGTAGAGGAAGCGAAGGATAGCTTTGTATTAATGTTGCGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| 3UTR-3UTR GCA 90 bp | TACATACCACCAGATGCAATTCATGCCTTTAAAACTGTGTGTGTGTGTGTGTGTGAGGATTCATTTCATTaGATGAGGTACACTTCCAAT | + |
|
Preference number: 2 (lower is better) Translates to: YIPPDAIHAFKTVCVCVCEDSFH*MRYTSN Trigger: ATTGGAAGTGTACCTCATGCAATGAAATGAATCCTC...ACACACACACACACACACAGTTTTAAAGGCATGAATTGCATCTGGTGGTATGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAGTTTTATGTTTTCTATACTTAGACGTGACCCTTCAATCAAAGGGAAGAGGCCTGAGTTTTCCAGTTTaGCTTTTTCAGAGATTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: TVLCFLYLDVTLQSKGRGLSFPV*LFQRFP Trigger: TGGAAATCTCTGAAAAAGCCAAACTGGAAAACTCAG...GCCTCTTCCCTTTGATTGAAGGGTCACGTCTAAGTATAGAAAACATAAAACTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTATGTTTTCTATACTTAGACGTGACCCTTCAATCAAAGGGAAGAGGCCTATTACTTTATCCATGTTCTaGTTCAGTCTTTCTGAATGG | + |
|
Preference number: 2 (lower is better) Translates to: FMFSILRRDPSIKGKRPITLSMF*FSLSEW Trigger: CCATTCAGAAAGACTGAATCAGAACATGGATAAAGT...AATAGGCCTCTTCCCTTTGATTGAAGGGTCACGTCTAAGTATAGAAAACATAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| 3UTR GCA 72 bp | TGCCCAGGCTGCCGCACCCACCGCCTCCTATTCAAATaGTGTCACGTGGGAGGAGTGTTCTTGTTCTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: CPGCRTHRLLFK*CHVGGVFLFLS Trigger: AGACAAGAACAAGAACACTCCTCCCACGTGACAGCATTTGAATAGGAGGCGGTGGGTGCGGCAGCCTGGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| 3UTR GCA 72 bp | TGTGTGTGTGCGCACGCGCGCGTGTGTGTGCGTGCATaGGTGCATCCATTTGAAGATCAGGGAACAACTTTG | + |
|
Preference number: 3 (lower is better) Translates to: CVCAHARVCVRA*VHPFEDQGTTL Trigger: CAAAGTTGTTCCCTGATCTTCAAATGGATGCACGCATGCACGCACACACACGCGCGCGTGCGCACACACACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| 3UTR CCA 72 bp | CTGTTCGGCCTTCTCCTCGCTGTCCTCCTCAGCACATaGCTCTTTAGCATCATTCTCTGTCAGCTTTTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: LFGLLLAVLLST*LFSIILCQLFA Trigger: GGCAAAAAGCTGACAGAGAATGATGCTAAAGAGCCATGTGCTGAGGAGGACAGCGAGGAGAAGGCCGAACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
||
| 3UTR-3UTR CAA 90 bp | CCACCGCCTCCTATTCAAATGCTGTCACGTGGGAGGAGTGTTCTTGTTCTTGTCAGGGTCCAGCATCTTTaGCAGTGTGATGGAAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: PPPPIQMLSRGRSVLVLVRVQHL*QCDGRG Trigger: TCCCCTTCCATCACACTGCAAAAGATGCTGGACCCT...GACAAGAACAAGAACACTCCTCCCACGTGACAGCATTTGAATAGGAGGCGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
||
| 3UTR-3UTR CAA 90 bp | CACAAGGTACTTTATTGTAAATCGGGACTGAAGCTGCCCAGGCTGCCGCACCCAGTGGGAGGAGTGTTCTaGTTCTTGTCTCTGAAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: HKVLYCKSGLKLPRLPHPVGGVF*FLSLKL Trigger: AAGCTTCAGAGACAAGAACAAGAACACTCCTCCCAC...TGGGTGCGGCAGCCTGGGCAGCTTCAGTCCCGATTTACAATAAAGTACCTTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| 3UTR TCA 72 bp | ATAGACTGTGACCCGATAGACCTCATCATCCTCATCTaGGAGCTCGTGCCCTTCGTCACTCAGGCTGTAATC | + |
|
Preference number: 3 (lower is better) Translates to: IDCDPIDLIILI*ELVPFVTQAVI Trigger: GATTACAGCCTGAGTGACGAAGGGCACGAGCTCTCAGATGAGGATGATGAGGTCTATCGGGTCACAGTCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
||
| 3UTR GCA 72 bp | CTGGAAGCCAGTTCTCACGAAGGGTCCAGCATCTTTTaGAGTGTGATGGAAGGGGAGGATTCATTTCATTGC | + |
|
Preference number: 3 (lower is better) Translates to: LEASSHEGSSIF*SVMEGEDSFHC Trigger: GCAATGAAATGAATCCTCCCCTTCCATCACACTGCAAAAGATGCTGGACCCTTCGTGAGAACTGGCTTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
||
| 3UTR GCA 72 bp | GCGTTTCCTCCTTCAACTCTTTCACGCTTTCTTGGCTaGTATAAACAATGCTGCTGGAAGTCGATGGTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: AFPPSTLSRFLG*YKQCCWKSMVG Trigger: CCCAACCATCGACTTCCAGCAGCATTGTTTATAGCAGCCAAGAAAGCGTGAAAGAGTTGAAGGAGGAAACGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
||
| 3UTR CCA 72 bp | TGCGTGCATCCATTTGAAGATCAGGGAACAACTTTGTaGAACTGGTTCACTCTTCCTGGGGGTTCCAAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: CVHPFEDQGTTL*NWFTLPGGSKD Trigger: ATCCTTGGAACCCCCAGGAAGAGTGAACCAGTTCCACAAAGTTGTTCCCTGATCTTCAAATGGATGCACGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAAGGCGCTTCTACCAGCCTCAGGCTTTTCAACCTGGGACAAACTGCAACACTCATGCGTGCATCCATTaGAAGATCAGGGAACAACTT | + |
|
Preference number: 3 (lower is better) Translates to: KRRFYQPQAFQPGTNCNTHACIH*KIREQL Trigger: AAGTTGTTCCCTGATCTTCAAATGGATGCACGCATG...AGTGTTGCAGTTTGTCCCAGGTTGAAAAGCCTGAGGCTGGTAGAAGCGCCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| 3UTR TCA 72 bp | AAGAGTCTGTATCGCTTTCTCCTGTCTGATAGACTGTaGCCCGATAGACCTCATCATCCTCATCTGAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: KSLYRFLLSDRL*PDRPHHPHLRA Trigger: AGCTCTCAGATGAGGATGATGAGGTCTATCGGGTCACAGTCTATCAGACAGGAGAAAGCGATACAGACTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
||
| 3UTR CCA 72 bp | CTTTCACGCTTTCTTGGCTGCTATAAACAATGCTGCTaGAAGTCGATGGTTGGGAATAGTCGTCACTCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LSRFLGCYKQCC*KSMVGNSRHSP Trigger: AGGAGAGTGACGACTATTCCCAACCATCGACTTCCAGCAGCATTGTTTATAGCAGCCAAGAAAGCGTGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
||
| 3UTR GCA 72 bp | ACTCTTTCACGCTTTCTTGGCTGCTATAAACAATGCTaGTGGAAGTCGATGGTTGGGAATAGTCGTCACTCT | + |
|
Preference number: 3 (lower is better) Translates to: TLSRFLGCYKQC*WKSMVGNSRHS Trigger: AGAGTGACGACTATTCCCAACCATCGACTTCCAGCAGCATTGTTTATAGCAGCCAAGAAAGCGTGAAAGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
||
| 3UTR GCA 72 bp | TCAACTCTTTCACGCTTTCTTGGCTGCTATAAACAATaGTGCTGGAAGTCGATGGTTGGGAATAGTCGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: STLSRFLGCYKQ*CWKSMVGNSRH Trigger: GTGACGACTATTCCCAACCATCGACTTCCAGCAGCATTGTTTATAGCAGCCAAGAAAGCGTGAAAGAGTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
||
| 3UTR CCA 72 bp | CATCCATTTGAAGATCAGGGAACAACTTTGTGGAACTaGTTCACTCTTCCTGGGGGTTCCAAGGATCAAATG | + |
|
Preference number: 3 (lower is better) Translates to: HPFEDQGTTLWN*FTLPGGSKDQM Trigger: CATTTGATCCTTGGAACCCCCAGGAAGAGTGAACCAGTTCCACAAAGTTGTTCCCTGATCTTCAAATGGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| 3UTR TCA 72 bp | GACGTGACCCTTCAATCAAAGGGAAGAGGCCTATTATaGACCAGGAGATTAATCTACATGGATAGACGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: DVTLQSKGRGLL*TRRLIYMDRRV Trigger: GACTCGTCTATCCATGTAGATTAATCTCCTGGTTCATAATAGGCCTCTTCCCTTTGATTGAAGGGTCACGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| 3UTR TCA 72 bp | GCTGTCACGTGGGAGGAGTGTTCTTGTTCTTGTCTCTaGAGCTTTAACGCAACATTAATACAAAGCTATCCT | + |
|
Preference number: 3 (lower is better) Translates to: AVTWEECSCSCL*SFNATLIQSYP Trigger: AGGATAGCTTTGTATTAATGTTGCGTTAAAGCTTCAGAGACAAGAACAAGAACACTCCTCCCACGTGACAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGAAAGGACTTCTCACATACACTTCCAAAGTCCTTCCAAGCGGAGATTATTTACATGCGTGCATCCATTaGAAGATCAGGGAACAACTT | + |
|
Preference number: 3 (lower is better) Translates to: WKGLLTYTSKVLPSGDYLHACIH*KIREQL Trigger: AAGTTGTTCCCTGATCTTCAAATGGATGCACGCATG...TAAATAATCTCCGCTTGGAAGGACTTTGGAAGTGTATGTGAGAAGTCCTTTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| 3UTR GCA 72 bp | TTTTGCAGTGTGATGGAAGGGGAGGATTCATTTCATTaGATGAGGTACACTTCCAATAGTCAGCTAAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: FCSVMEGEDSFH*MRYTSNSQLRK Trigger: TTTCCTTAGCTGACTATTGGAAGTGTACCTCATGCAATGAAATGAATCCTCCCCTTCCATCACACTGCAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
||
| 3UTR-3UTR CAA 90 bp | TTATGTTTTCTATACTTAGACGTGACCCTTCAATCAAAGGGAAGAGGCCTATTAGTGGGAGGAGTGTTCTaGTTCTTGTCTCTGAAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LCFLYLDVTLQSKGRGLLVGGVF*FLSLKL Trigger: AAGCTTCAGAGACAAGAACAAGAACACTCCTCCCAC...TAATAGGCCTCTTCCCTTTGATTGAAGGGTCACGTCTAAGTATAGAAAACATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| 3UTR-3UTR CAA 90 bp | AACGCAACATTAATACAAAGCTATCCTTCGCTTCCTCTACCTTACAGTTTTATGTTCTCTGTCAGCTTTTaGCCATCAGGCACATCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: NATLIQSYPSLPLPYSFMFSVSF*PSGTSK Trigger: CTTGGATGTGCCTGATGGCAAAAAGCTGACAGAGAA...CATAAAACTGTAAGGTAGAGGAAGCGAAGGATAGCTTTGTATTAATGTTGCGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGAAAGGACTTCTCACATACACTTCCAAAGTCCTTCCAAGCGGAGATTATTTACTCTTTCACGCTTTCTaGGCTGCTATAAACAATGCT | + |
|
Preference number: 3 (lower is better) Translates to: WKGLLTYTSKVLPSGDYLLFHAF*AAINNA Trigger: AGCATTGTTTATAGCAGCCAAGAAAGCGTGAAAGAG...TAAATAATCTCCGCTTGGAAGGACTTTGGAAGTGTATGTGAGAAGTCCTTTCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGTTTTATGTTTTCTATACTTAGACGTGACCCTTCAATCAAAGGGAAGAGGCGGAGGATTCATTTCATaGCATGAGGTACACTTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: TVLCFLYLDVTLQSKGRGGGFIS*HEVHFQ Trigger: TTGGAAGTGTACCTCATGCAATGAAATGAATCCTCC...GCCTCTTCCCTTTGATTGAAGGGTCACGTCTAAGTATAGAAAACATAAAACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
||
| CDS-3UTR GCA 90 bp | GGGACTGAAGCTGCCCAGGCTGCCGCACCCACCGCCTCCTATTCAAATGCTGTCTCTCTGTGGACTCGCTaGTGCTGCTGCTACTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GTEAAQAAAPTASYSNAVSLWTR*CCCYCC Trigger: GCAGCAGTAGCAGCAGCAGCAGCGAGTCCACAGAGA...GACAGCATTTGAATAGGAGGCGGTGGGTGCGGCAGCCTGGGCAGCTTCAGTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR GCA 90 bp | AAATCGGGACTGAAGCTGCCCAGGCTGCCGCACCCACCGCCTCCTATTCAAATGTGCTGCTACTGCTGCTaGTGCCGCCGCTGCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: KSGLKLPRLPHPPPPIQMCCYCC*CRRCTS Trigger: AGATGTGCAGCGGCGGCAGCAGCAGCAGTAGCAGCA...CATTTGAATAGGAGGCGGTGGGTGCGGCAGCCTGGGCAGCTTCAGTCCCGATTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR CCA 90 bp | TCCTGGGGGTTCCAAGGATCAAATGTGTGTCAGTGGGTGTACACAGCAGGTGCCGCGAGGGCGTCTCTGTaGACTCGCTGCTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SWGFQGSNVCQWVYTAGAARASL*TRCCCC Trigger: GCAGCAGCAGCAGCGAGTCCACAGAGACGCCCTCGC...GGCACCTGCTGTGTACACCCACTGACACACATTTGATCCTTGGAACCCCCAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR GCA 90 bp | CCACCGCCTCCTATTCAAATGCTGTCACGTGGGAGGAGTGTTCTTGTTCTTGTCCTGCGGCGCTTCCGGTaGCGCTCCCCAGGTAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PPPPIQMLSRGRSVLVLVLRRFR*RSPGSS Trigger: TGAGCTACCTGGGGAGCGGCACCGGAAGCGCCGCAG...GACAAGAACAAGAACACTCCTCCCACGTGACAGCATTTGAATAGGAGGCGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| CDS-3UTR GCA 90 bp | CCGCCTCCTATTCAAATGCTGTCACGTGGGAGGAGTGTTCTTGTTCTTGTCTCTCTGCGGCGCTTCCGGTaGCGCTCCCCAGGTAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PPPIQMLSRGRSVLVLVSLRRFR*RSPGSS Trigger: TGAGCTACCTGGGGAGCGGCACCGGAAGCGCCGCAG...AGAGACAAGAACAAGAACACTCCTCCCACGTGACAGCATTTGAATAGGAGGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| CDS-3UTR GCA 90 bp | CACAAGGTACTTTATTGTAAATCGGGACTGAAGCTGCCCAGGCTGCCGCACCCATGCTGCTGCCGCCGCTaGACATCTCCCTCAGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: HKVLYCKSGLKLPRLPHPCCCRR*TSPSAH Trigger: GTGAGCTGAGGGAGATGTGCAGCGGCGGCAGCAGCA...TGGGTGCGGCAGCCTGGGCAGCTTCAGTCCCGATTTACAATAAAGTACCTTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR TCA 90 bp | AAGGTACTTTATTGTAAATCGGGACTGAAGCTGCCCAGGCTGCCGCACCCACCGCGAAGCTGGAATCTGTaGGGTGCTTGCAGCACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KVLYCKSGLKLPRLPHPPRSWNL*GACSTL Trigger: GAGGGTGCTGCAAGCACCTCACAGATTCCAGCTTCG...CGGTGGGTGCGGCAGCCTGGGCAGCTTCAGTCCCGATTTACAATAAAGTACCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000155285.8 |
||
| CDS-3UTR GCA 90 bp | GGGACTGAAGCTGCCCAGGCTGCCGCACCCACCGCCTCCTATTCAAATGCTGTCCTCTCGTCTTTGTCCTaGGTTTCCTCCTTCAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: GTEAAQAAAPTASYSNAVLSSLS*VSSFNS Trigger: AGAGTTGAAGGAGGAAACGCAGGACAAAGACGAGAG...GACAGCATTTGAATAGGAGGCGGTGGGTGCGGCAGCCTGGGCAGCTTCAGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR TCA 90 bp | GGGACTGAAGCTGCCCAGGCTGCCGCACCCACCGCCTCCTATTCAAATGCTGTCGTGCCAGAGTCTTGCTaGCTTACAGCCACTAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: GTEAAQAAAPTASYSNAVVPESC*LTATKF Trigger: AAATTTAGTGGCTGTAAGTCAGCAAGACTCTGGCAC...GACAGCATTTGAATAGGAGGCGGTGGGTGCGGCAGCCTGGGCAGCTTCAGTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| CDS-3UTR GCA 90 bp | GGGACTGAAGCTGCCCAGGCTGCCGCACCCACCGCCTCCTATTCAAATGCTGTCGGCTGCTATAAACAATaGTGCTGGAAGTCGATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GTEAAQAAAPTASYSNAVGCYKQ*CWKSMV Trigger: AACCATCGACTTCCAGCAGCATTGTTTATAGCAGCC...GACAGCATTTGAATAGGAGGCGGTGGGTGCGGCAGCCTGGGCAGCTTCAGTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR TCA 90 bp | GGGACTGAAGCTGCCCAGGCTGCCGCACCCACCGCCTCCTATTCAAATGCTGTCAAACTGATCAGAAACTaGATCCTGATCCAGGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: GTEAAQAAAPTASYSNAVKLIRN*ILIQAI Trigger: GATTGCCTGGATCAGGATTCAGTTTCTGATCAGTTT...GACAGCATTTGAATAGGAGGCGGTGGGTGCGGCAGCCTGGGCAGCTTCAGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR GCA 90 bp | AAATCGGGACTGAAGCTGCCCAGGCTGCCGCACCCACCGCCTCCTATTCAAATGTCTCACTCAGCGATGTaGCAGAGTCTTGCTGACTTA | + |
|
Preference number: 4 (lower is better) Translates to: KSGLKLPRLPHPPPPIQMSHSAM*QSLADL Trigger: TAAGTCAGCAAGACTCTGGCACATCGCTGAGTGAGA...CATTTGAATAGGAGGCGGTGGGTGCGGCAGCCTGGGCAGCTTCAGTCCCGATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| CDS-3UTR TCA 90 bp | CCCACCGCCTCCTATTCAAATGCTGTCACGTGGGAGGAGTGTTCTTGTTCTTGTCTCATCATCCTCATCTaGGAGCTCGTGCCCTTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: PTASYSNAVTWEECSCSCLIILI*ELVPFV Trigger: GACGAAGGGCACGAGCTCTCAGATGAGGATGATGAG...ACAAGAACAAGAACACTCCTCCCACGTGACAGCATTTGAATAGGAGGCGGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR GCA 90 bp | AGGAGATGGAAAGGACTTCTCACATACACTTCCAAAGTCCTTCCAAGCGGAGATTGCTGCTGCCGCCGCTaGACATCTCCCTCAGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RRWKGLLTYTSKVLPSGDCCCRR*TSPSAH Trigger: GTGAGCTGAGGGAGATGTGCAGCGGCGGCAGCAGCA...ATCTCCGCTTGGAAGGACTTTGGAAGTGTATGTGAGAAGTCCTTTCCATCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR GCA 90 bp | CCATTTGAAGATCAGGGAACAACTTTGTGGAACTGGTTCACTCTTCCTGGGGGTTGCTGCTACTGCTGCTaGTGCCGCCGCTGCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: PFEDQGTTLWNWFTLPGGCCYCC*CRRCTS Trigger: AGATGTGCAGCGGCGGCAGCAGCAGCAGTAGCAGCA...ACCCCCAGGAAGAGTGAACCAGTTCCACAAAGTTGTTCCCTGATCTTCAAATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR GCA 90 bp | TGTACACAGCAGGTGCCTTTACTGGCTGAGTCTTCTCTGCAGCCCACAACTCACTTTGGATTGGCTGTCTaGACACTGGGCAGGGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CTQQVPLLAESSLQPTTHFGLAV*TLGRAC Trigger: ACAAGCCCTGCCCAGTGTGCAGACAGCCAATCCAAA...GTGAGTTGTGGGCTGCAGAGAAGACTCAGCCAGTAAAGGCACCTGCTGTGTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR GCA 90 bp | CACAAGGTACTTTATTGTAAATCGGGACTGAAGCTGCCCAGGCTGCCGCACCCATTTGGATTGGCTGTCTaGACACTGGGCAGGGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HKVLYCKSGLKLPRLPHPFGLAV*TLGRAC Trigger: ACAAGCCCTGCCCAGTGTGCAGACAGCCAATCCAAA...TGGGTGCGGCAGCCTGGGCAGCTTCAGTCCCGATTTACAATAAAGTACCTTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| 3UTR CAA 72 bp | TTGGCTGCTATAAACAATGCTGCTGGAAGTCGATGGTaGGGAATAGTCGTCACTCTCCTGGGACAGGGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LAAINNAAGSRW*GIVVTLLGQGR Trigger: ACGCCCCTGTCCCAGGAGAGTGACGACTATTCCCAACCATCGACTTCCAGCAGCATTGTTTATAGCAGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
||
| CDS-3UTR TCA 90 bp | GAGAAGCTAGATTCCACACTCTCGTCTTTGTCCTGCGTTTCCTCCTTCAACTCTCGAAGCTGGAATCTGTaGGGTGCTTGCAGCACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: EKLDSTLSSLSCVSSFNSRSWNL*GACSTL Trigger: GAGGGTGCTGCAAGCACCTCACAGATTCCAGCTTCG...AGAGTTGAAGGAGGAAACGCAGGACAAAGACGAGAGTGTGGAATCTAGCTTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
||
| CDS-3UTR CCA 90 bp | TGTACACAGCAGGTGCCTTTACTGGCTGAGTCTTCTCTGCAGCCCACAACTCACTGGCTGTCTGCACACTaGGCAGGGCTTGTTTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CTQQVPLLAESSLQPTTHWLSAH*AGLVSF Trigger: AAAAGAAACAAGCCCTGCCCAGTGTGCAGACAGCCA...GTGAGTTGTGGGCTGCAGAGAAGACTCAGCCAGTAAAGGCACCTGCTGTGTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR TCA 90 bp | CACAAGGTACTTTATTGTAAATCGGGACTGAAGCTGCCCAGGCTGCCGCACCCAGCATCTTTTGCAGTGTaGTGGAAGGGGAGGATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HKVLYCKSGLKLPRLPHPASFAV*WKGRIH Trigger: ATGAATCCTCCCCTTCCATCACACTGCAAAAGATGC...TGGGTGCGGCAGCCTGGGCAGCTTCAGTCCCGATTTACAATAAAGTACCTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR GCA 90 bp | AAATCGGGACTGAAGCTGCCCAGGCTGCCGCACCCACCGCCTCCTATTCAAATGCAATACACAATGTGCTaGTGCTTCTCGTCATATAAC | + |
|
Preference number: 4 (lower is better) Translates to: KSGLKLPRLPHPPPPIQMQYTMC*CFSSYN Trigger: GTTATATGACGAGAAGCAGCAGCACATTGTGTATTG...CATTTGAATAGGAGGCGGTGGGTGCGGCAGCCTGGGCAGCTTCAGTCCCGATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| CDS-3UTR GCA 90 bp | ACAGTTTTATGTTTTCTATACTTAGACGTGACCCTTCAATCAAAGGGAAGAGGCCTGCGGCGCTTCCGGTaGCGCTCCCCAGGTAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TVLCFLYLDVTLQSKGRGLRRFR*RSPGSS Trigger: TGAGCTACCTGGGGAGCGGCACCGGAAGCGCCGCAG...GCCTCTTCCCTTTGATTGAAGGGTCACGTCTAAGTATAGAAAACATAAAACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| CDS-3UTR GCA 90 bp | AGGAGATGGAAAGGACTTCTCACATACACTTCCAAAGTCCTTCCAAGCGGAGATTCTCTGTGGACTCGCTaGTGCTGCTGCTACTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RRWKGLLTYTSKVLPSGDSLWTR*CCCYCC Trigger: GCAGCAGTAGCAGCAGCAGCAGCGAGTCCACAGAGA...ATCTCCGCTTGGAAGGACTTTGGAAGTGTATGTGAGAAGTCCTTTCCATCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR TCA 90 bp | CACAAGGTACTTTATTGTAAATCGGGACTGAAGCTGCCCAGGCTGCCGCACCCATCAGAAACTGAATCCTaGTCCAGGCAATCACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HKVLYCKSGLKLPRLPHPSETES*SRQSPE Trigger: TTCTGGTGATTGCCTGGATCAGGATTCAGTTTCTGA...TGGGTGCGGCAGCCTGGGCAGCTTCAGTCCCGATTTACAATAAAGTACCTTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR TCA 90 bp | CCCACCGCCTCCTATTCAAATGCTGTCACGTGGGAGGAGTGTTCTTGTTCTTGTGCATCTTTTGCAGTGTaGTGGAAGGGGAGGATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PTASYSNAVTWEECSCSCASFAV*WKGRIH Trigger: ATGAATCCTCCCCTTCCATCACACTGCAAAAGATGC...ACAAGAACAAGAACACTCCTCCCACGTGACAGCATTTGAATAGGAGGCGGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR GCA 90 bp | CCCACCGCCTCCTATTCAAATGCTGTCACGTGGGAGGAGTGTTCTTGTTCTTGTTCTCACTCAGCGATGTaGCAGAGTCTTGCTGACTTA | + |
|
Preference number: 4 (lower is better) Translates to: PTASYSNAVTWEECSCSCSHSAM*QSLADL Trigger: TAAGTCAGCAAGACTCTGGCACATCGCTGAGTGAGA...ACAAGAACAAGAACACTCCTCCCACGTGACAGCATTTGAATAGGAGGCGGTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| CDS-3UTR GCA 90 bp | AATGGGCTGGTTTCTAAACCTAGCCTAAGTACAGGCCTGAAACATAGGCAACCATCATCTGAGAGCTCGTaGCCTTCGTCACTCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NGLVSKPSLSTGLKHRQPSSESS*PSSLRL Trigger: CAGCCTGAGTGACGAAGGGCACGAGCTCTCAGATGA...TGGTTGCCTATGTTTCAGGCCTGTACTTAGGCTAGGTTTAGAAACCAGCCCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR GCA 90 bp | CCACCGCCTCCTATTCAAATGCTGTCACGTGGGAGGAGTGTTCTTGTTCTTGTCTCTCTGTCAGCTTTTTaGCATCAGGCACATCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PPPPIQMLSRGRSVLVLVSLSAF*HQAHPS Trigger: GCTTGGATGTGCCTGATGGCAAAAAGCTGACAGAGA...GACAAGAACAAGAACACTCCTCCCACGTGACAGCATTTGAATAGGAGGCGGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR GCA 90 bp | CCACCGCCTCCTATTCAAATGCTGTCACGTGGGAGGAGTGTTCTTGTTCTTGTCCTCTCGTCTTTGTCCTaGGTTTCCTCCTTCAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: PPPPIQMLSRGRSVLVLVLSSLS*VSSFNS Trigger: AGAGTTGAAGGAGGAAACGCAGGACAAAGACGAGAG...GACAAGAACAAGAACACTCCTCCCACGTGACAGCATTTGAATAGGAGGCGGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR CCA 90 bp | ACAGTTTTATGTTTTCTATACTTAGACGTGACCCTTCAATCAAAGGGAAGAGGCGCGAGGGCGTCTCTGTaGACTCGCTGCTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TVLCFLYLDVTLQSKGRGARASL*TRCCCC Trigger: GCAGCAGCAGCAGCGAGTCCACAGAGACGCCCTCGC...GCCTCTTCCCTTTGATTGAAGGGTCACGTCTAAGTATAGAAAACATAAAACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR CCA 90 bp | AAATCGGGACTGAAGCTGCCCAGGCTGCCGCACCCACCGCCTCCTATTCAAATGCTGAGTTTTCCAGTTTaGCTTTTTCAGAGATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KSGLKLPRLPHPPPPIQMLSFPV*LFQRFP Trigger: TGGAAATCTCTGAAAAAGCCAAACTGGAAAACTCAG...CATTTGAATAGGAGGCGGTGGGTGCGGCAGCCTGGGCAGCTTCAGTCCCGATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR CCA 90 bp | GGCAAAAAGGCGCTTCTACCAGCCTCAGGCTTTTCAACCTGGGACAAACTGCAACACAATCATTTGGATTaGCTGTCTGCACACTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GKKALLPASGFSTWDKLQHNHLD*LSAHWA Trigger: TGCCCAGTGTGCAGACAGCCAATCCAAATGATTGTG...TTGCAGTTTGTCCCAGGTTGAAAAGCCTGAGGCTGGTAGAAGCGCCTTTTTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| 3UTR CAA 72 bp | GCATGCGTGCATCCATTTGAAGATCAGGGAACAACTTaGTGGAACTGGTTCACTCTTCCTGGGGGTTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ACVHPFEDQGTT*WNWFTLPGGSK Trigger: CTTGGAACCCCCAGGAAGAGTGAACCAGTTCCACAAAGTTGTTCCCTGATCTTCAAATGGATGCACGCATGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| CDS-3UTR TCA 90 bp | CCACCGCCTCCTATTCAAATGCTGTCACGTGGGAGGAGTGTTCTTGTTCTTGTCGTGCCAGAGTCTTGCTaGCTTACAGCCACTAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: PPPPIQMLSRGRSVLVLVVPESC*LTATKF Trigger: AAATTTAGTGGCTGTAAGTCAGCAAGACTCTGGCAC...GACAAGAACAAGAACACTCCTCCCACGTGACAGCATTTGAATAGGAGGCGGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| CDS-3UTR GCA 90 bp | ACGGAGCTGAGGCAAAAAGGCGCTTCTACCAGCCTCAGGCTTTTCAACCTGGGACAATACACAATGTGCTaGTGCTTCTCGTCATATAAC | + |
|
Preference number: 4 (lower is better) Translates to: TELRQKGASTSLRLFNLGQYTMC*CFSSYN Trigger: GTTATATGACGAGAAGCAGCAGCACATTGTGTATTG...TCCCAGGTTGAAAAGCCTGAGGCTGGTAGAAGCGCCTTTTTGCCTCAGCTCCGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| CDS-3UTR GCA 90 bp | GCGTGTGTTTTCACTTACATACCACCAGATGCAATTCATGCCTTTAAAACTGTGCTGTGGACTCGCTGCTaGTGCTGCTACTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ACVFTYIPPDAIHAFKTVLWTRC*CCYCCC Trigger: GCAGCAGCAGTAGCAGCAGCAGCAGCGAGTCCACAG...CACAGTTTTAAAGGCATGAATTGCATCTGGTGGTATGTAAGTGAAAACACACGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR GCA 90 bp | GGCAAAAAGGCGCTTCTACCAGCCTCAGGCTTTTCAACCTGGGACAAACTGCAAGGCTGCTATAAACAATaGTGCTGGAAGTCGATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GKKALLPASGFSTWDKLQGCYKQ*CWKSMV Trigger: AACCATCGACTTCCAGCAGCATTGTTTATAGCAGCC...TTGCAGTTTGTCCCAGGTTGAAAAGCCTGAGGCTGGTAGAAGCGCCTTTTTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| 3UTR CAA 72 bp | TCTGGAAGCCAGTTCTCACGAAGGGTCCAGCATCTTTaGCAGTGTGATGGAAGGGGAGGATTCATTTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: SGSQFSRRVQHL*QCDGRGGFISL Trigger: CAATGAAATGAATCCTCCCCTTCCATCACACTGCAAAAGATGCTGGACCCTTCGTGAGAACTGGCTTCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
||
| CDS-3UTR TCA 90 bp | AAAAGGCGCTTCTACCAGCCTCAGGCTTTTCAACCTGGGACAAACTGCAACACTGTGCCAGAGTCTTGCTaGCTTACAGCCACTAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: KRRFYQPQAFQPGTNCNTVPESC*LTATKF Trigger: AAATTTAGTGGCTGTAAGTCAGCAAGACTCTGGCAC...AGTGTTGCAGTTTGTCCCAGGTTGAAAAGCCTGAGGCTGGTAGAAGCGCCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| CDS-3UTR TCA 90 bp | AAAAGGCGCTTCTACCAGCCTCAGGCTTTTCAACCTGGGACAAACTGCAACACTTCAGAAACTGAATCCTaGTCCAGGCAATCACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KRRFYQPQAFQPGTNCNTSETES*SRQSPE Trigger: TTCTGGTGATTGCCTGGATCAGGATTCAGTTTCTGA...AGTGTTGCAGTTTGTCCCAGGTTGAAAAGCCTGAGGCTGGTAGAAGCGCCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR CCA 90 bp | CCATTTGAAGATCAGGGAACAACTTTGTGGAACTGGTTCACTCTTCCTGGGGGTTTTCCCCTTATCGTCTaGAAGCCAGTTCTCACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PFEDQGTTLWNWFTLPGGFPLIV*KPVLTK Trigger: CTTCGTGAGAACTGGCTTCCAGACGATAAGGGGAAA...ACCCCCAGGAAGAGTGAACCAGTTCCACAAAGTTGTTCCCTGATCTTCAAATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR CCA 90 bp | CCCACCGCCTCCTATTCAAATGCTGTCACGTGGGAGGAGTGTTCTTGTTCTTGTGTTAGCACAATCATTTaGATTGGCTGTCTGCACACT | + |
|
Preference number: 4 (lower is better) Translates to: PTASYSNAVTWEECSCSCVSTII*IGCLHT Trigger: AGTGTGCAGACAGCCAATCCAAATGATTGTGCTAAC...ACAAGAACAAGAACACTCCTCCCACGTGACAGCATTTGAATAGGAGGCGGTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR TCA 90 bp | TGGAAAGGACTTCTCACATACACTTCCAAAGTCCTTCCAAGCGGAGATTATTTACTCATCATCCTCATCTaGGAGCTCGTGCCCTTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: WKGLLTYTSKVLPSGDYLLIILI*ELVPFV Trigger: GACGAAGGGCACGAGCTCTCAGATGAGGATGATGAG...TAAATAATCTCCGCTTGGAAGGACTTTGGAAGTGTATGTGAGAAGTCCTTTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR TCA 90 bp | AGGAGATGGAAAGGACTTCTCACATACACTTCCAAAGTCCTTCCAAGCGGAGATTGCACACGTGAAACATaGCATGAGGTGTCCAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RRWKGLLTYTSKVLPSGDCTRET*HEVSSL Trigger: AAGACTGGACACCTCATGTCATGTTTCACGTGTGCA...ATCTCCGCTTGGAAGGACTTTGGAAGTGTATGTGAGAAGTCCTTTCCATCTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR GCA 90 bp | AGGAGATGGAAAGGACTTCTCACATACACTTCCAAAGTCCTTCCAAGCGGAGATTCTTCTGGTGGCGCTTaGAAAGGATCCTTCAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: RRWKGLLTYTSKVLPSGDSSGGA*KGSFRS Trigger: TGATCTGAAGGATCCTTTGCAAGCGCCACCAGAAGA...ATCTCCGCTTGGAAGGACTTTGGAAGTGTATGTGAGAAGTCCTTTCCATCTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR GCA 90 bp | AACGCAACATTAATACAAAGCTATCCTTCGCTTCCTCTACCTTACAGTTTTATGCTGTGGACTCGCTGCTaGTGCTGCTACTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NATLIQSYPSLPLPYSFMLWTRC*CCYCCC Trigger: GCAGCAGCAGTAGCAGCAGCAGCAGCGAGTCCACAG...CATAAAACTGTAAGGTAGAGGAAGCGAAGGATAGCTTTGTATTAATGTTGCGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR GCA 90 bp | TGGAAAGGACTTCTCACATACACTTCCAAAGTCCTTCCAAGCGGAGATTATTTATCATCTGAGAGCTCGTaGCCTTCGTCACTCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WKGLLTYTSKVLPSGDYLSSESS*PSSLRL Trigger: CAGCCTGAGTGACGAAGGGCACGAGCTCTCAGATGA...TAAATAATCTCCGCTTGGAAGGACTTTGGAAGTGTATGTGAGAAGTCCTTTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR CCA 90 bp | CACAAGGTACTTTATTGTAAATCGGGACTGAAGCTGCCCAGGCTGCCGCACCCACTGAGTTTTCCAGTTTaGCTTTTTCAGAGATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HKVLYCKSGLKLPRLPHPLSFPV*LFQRFP Trigger: TGGAAATCTCTGAAAAAGCCAAACTGGAAAACTCAG...TGGGTGCGGCAGCCTGGGCAGCTTCAGTCCCGATTTACAATAAAGTACCTTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR CCA 90 bp | AAAAGGCGCTTCTACCAGCCTCAGGCTTTTCAACCTGGGACAAACTGCAACACTCAAAAGCAATGGTTTTaGTCTAACCAGAGTCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KRRFYQPQAFQPGTNCNTQKQWF*SNQSLL Trigger: CAAGAGACTCTGGTTAGACCAAAACCATTGCTTTTG...AGTGTTGCAGTTTGTCCCAGGTTGAAAAGCCTGAGGCTGGTAGAAGCGCCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000155285.8 |
||
| CDS-3UTR TCA 90 bp | AATGGGCTGGTTTCTAAACCTAGCCTAAGTACAGGCCTGAAACATAGGCAACCAAAACTGATCAGAAACTaGATCCTGATCCAGGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: NGLVSKPSLSTGLKHRQPKLIRN*ILIQAI Trigger: GATTGCCTGGATCAGGATTCAGTTTCTGATCAGTTT...TGGTTGCCTATGTTTCAGGCCTGTACTTAGGCTAGGTTTAGAAACCAGCCCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR CCA 90 bp | AATGGGCTGGTTTCTAAACCTAGCCTAAGTACAGGCCTGAAACATAGGCAACCAGTTAGCACAATCATTTaGATTGGCTGTCTGCACACT | + |
|
Preference number: 4 (lower is better) Translates to: NGLVSKPSLSTGLKHRQPVSTII*IGCLHT Trigger: AGTGTGCAGACAGCCAATCCAAATGATTGTGCTAAC...TGGTTGCCTATGTTTCAGGCCTGTACTTAGGCTAGGTTTAGAAACCAGCCCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR GCA 90 bp | AATGGGCTGGTTTCTAAACCTAGCCTAAGTACAGGCCTGAAACATAGGCAACCAGCATATATTTTCCTGTaGTCCTTCACAGAGAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: NGLVSKPSLSTGLKHRQPAYIFL*SFTEKL Trigger: GAGTTTCTCTGTGAAGGAGCACAGGAAAATATATGC...TGGTTGCCTATGTTTCAGGCCTGTACTTAGGCTAGGTTTAGAAACCAGCCCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| CDS-3UTR GCA 90 bp | TGGAAAGGACTTCTCACATACACTTCCAAAGTCCTTCCAAGCGGAGATTATTTATCTTCTGGTGGCGCTTaGAAAGGATCCTTCAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: WKGLLTYTSKVLPSGDYLSSGGA*KGSFRS Trigger: TGATCTGAAGGATCCTTTGCAAGCGCCACCAGAAGA...TAAATAATCTCCGCTTGGAAGGACTTTGGAAGTGTATGTGAGAAGTCCTTTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR CCA 90 bp | AATGGGCTGGTTTCTAAACCTAGCCTAAGTACAGGCCTGAAACATAGGCAACCACAAAAGCAATGGTTTTaGTCTAACCAGAGTCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NGLVSKPSLSTGLKHRQPQKQWF*SNQSLL Trigger: CAAGAGACTCTGGTTAGACCAAAACCATTGCTTTTG...TGGTTGCCTATGTTTCAGGCCTGTACTTAGGCTAGGTTTAGAAACCAGCCCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000155285.8 |
||
| CDS-3UTR TCA 90 bp | GTTTTCACTTACATACCACCAGATGCAATTCATGCCTTTAAAACTGTGTGTGTGTGCACACGTGAAACATaGCATGAGGTGTCCAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VFTYIPPDAIHAFKTVCVCTRET*HEVSSL Trigger: AAGACTGGACACCTCATGTCATGTTTCACGTGTGCA...CACACACACAGTTTTAAAGGCATGAATTGCATCTGGTGGTATGTAAGTGAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR CCA 90 bp | TTATGTTTTCTATACTTAGACGTGACCCTTCAATCAAAGGGAAGAGGCCTATTATGGCTGTCTGCACACTaGGCAGGGCTTGTTTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LCFLYLDVTLQSKGRGLLWLSAH*AGLVSF Trigger: AAAAGAAACAAGCCCTGCCCAGTGTGCAGACAGCCA...TAATAGGCCTCTTCCCTTTGATTGAAGGGTCACGTCTAAGTATAGAAAACATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR CCA 90 bp | GTTTTCACTTACATACCACCAGATGCAATTCATGCCTTTAAAACTGTGTGTGTGCACAATCATTTGGATTaGCTGTCTGCACACTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VFTYIPPDAIHAFKTVCVHNHLD*LSAHWA Trigger: TGCCCAGTGTGCAGACAGCCAATCCAAATGATTGTG...CACACACACAGTTTTAAAGGCATGAATTGCATCTGGTGGTATGTAAGTGAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR GCA 90 bp | TTATGTTTTCTATACTTAGACGTGACCCTTCAATCAAAGGGAAGAGGCCTATTATCTCACTCAGCGATGTaGCAGAGTCTTGCTGACTTA | + |
|
Preference number: 4 (lower is better) Translates to: LCFLYLDVTLQSKGRGLLSHSAM*QSLADL Trigger: TAAGTCAGCAAGACTCTGGCACATCGCTGAGTGAGA...TAATAGGCCTCTTCCCTTTGATTGAAGGGTCACGTCTAAGTATAGAAAACATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| CDS-3UTR GCA 90 bp | TTATGTTTTCTATACTTAGACGTGACCCTTCAATCAAAGGGAAGAGGCCTATTATCTCTGTCAGCTTTTTaGCATCAGGCACATCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LCFLYLDVTLQSKGRGLLSLSAF*HQAHPS Trigger: GCTTGGATGTGCCTGATGGCAAAAAGCTGACAGAGA...TAATAGGCCTCTTCCCTTTGATTGAAGGGTCACGTCTAAGTATAGAAAACATAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR GCA 90 bp | GCGTGTGTTTTCACTTACATACCACCAGATGCAATTCATGCCTTTAAAACTGTGGCATATATTTTCCTGTaGTCCTTCACAGAGAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: ACVFTYIPPDAIHAFKTVAYIFL*SFTEKL Trigger: GAGTTTCTCTGTGAAGGAGCACAGGAAAATATATGC...CACAGTTTTAAAGGCATGAATTGCATCTGGTGGTATGTAAGTGAAAACACACGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| CDS-3UTR CCA 90 bp | GCGTGTGTTTTCACTTACATACCACCAGATGCAATTCATGCCTTTAAAACTGTGTATAAACAATGCTGCTaGAAGTCGATGGTTGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ACVFTYIPPDAIHAFKTVYKQCC*KSMVGN Trigger: ATTCCCAACCATCGACTTCCAGCAGCATTGTTTATA...CACAGTTTTAAAGGCATGAATTGCATCTGGTGGTATGTAAGTGAAAACACACGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR GCA 90 bp | GTTTTCACTTACATACCACCAGATGCAATTCATGCCTTTAAAACTGTGTGTGTGCAATACACAATGTGCTaGTGCTTCTCGTCATATAAC | + |
|
Preference number: 4 (lower is better) Translates to: VFTYIPPDAIHAFKTVCVQYTMC*CFSSYN Trigger: GTTATATGACGAGAAGCAGCAGCACATTGTGTATTG...CACACACACAGTTTTAAAGGCATGAATTGCATCTGGTGGTATGTAAGTGAAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| CDS-3UTR GCA 90 bp | GCGTGTGTTTTCACTTACATACCACCAGATGCAATTCATGCCTTTAAAACTGTGGAGGATTCATTTCATTaGATGAGGTACACTTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: ACVFTYIPPDAIHAFKTVEDSFH*MRYTSN Trigger: ATTGGAAGTGTACCTCATGCAATGAAATGAATCCTC...CACAGTTTTAAAGGCATGAATTGCATCTGGTGGTATGTAAGTGAAAACACACGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR GCA 90 bp | ACAGTTTTATGTTTTCTATACTTAGACGTGACCCTTCAATCAAAGGGAAGAGGCGAGGATTCATTTCATTaGATGAGGTACACTTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TVLCFLYLDVTLQSKGRGEDSFH*MRYTSN Trigger: ATTGGAAGTGTACCTCATGCAATGAAATGAATCCTC...GCCTCTTCCCTTTGATTGAAGGGTCACGTCTAAGTATAGAAAACATAAAACTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR CCA 90 bp | TTTATGTTTTCTATACTTAGACGTGACCCTTCAATCAAAGGGAAGAGGCCTATTTATAAACAATGCTGCTaGAAGTCGATGGTTGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FMFSILRRDPSIKGKRPIYKQCC*KSMVGN Trigger: ATTCCCAACCATCGACTTCCAGCAGCATTGTTTATA...AATAGGCCTCTTCCCTTTGATTGAAGGGTCACGTCTAAGTATAGAAAACATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR CAA 90 bp | AAATCGGGACTGAAGCTGCCCAGGCTGCCGCACCCACCGCCTCCTATTCAAATGAGGGTCCAGCATCTTTaGCAGTGTGATGGAAGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: KSGLKLPRLPHPPPPIQMRVQHL*QCDGRG Trigger: TCCCCTTCCATCACACTGCAAAAGATGCTGGACCCT...CATTTGAATAGGAGGCGGTGGGTGCGGCAGCCTGGGCAGCTTCAGTCCCGATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS GCA 90 bp | CTTGCAAAGGATCCTTCAGATCACTCCCACCTTCAGGCTGACGTCTaGTCTCACTCAGCGATGTGCCAGAGTCTTGCTGACTTACAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LAKDPSDHSHLQADV*SHSAMCQSLADLQP Trigger: TGGCTGTAAGTCAGCAAGACTCTGGCACATCGCTGAGTGAGAGCAGACGTCAGCCTGAAGGTGGGAGTGATCTGAAGGATCCTTTGCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR CAA 90 bp | TGTACACAGCAGGTGCCTTTACTGGCTGAGTCTTCTCTGCAGCCCACAACTCACGCACAATCATTTGGATaGGCTGTCTGCACACTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: CTQQVPLLAESSLQPTTHAQSFG*AVCTLG Trigger: GCCCAGTGTGCAGACAGCCAATCCAAATGATTGTGC...GTGAGTTGTGGGCTGCAGAGAAGACTCAGCCAGTAAAGGCACCTGCTGTGTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR CAA 90 bp | TGTACACAGCAGGTGCCTTTACTGGCTGAGTCTTCTCTGCAGCCCACAACTCACTCTAACCAGAGTCTCTaGTTCCGAAGCTGGAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: CTQQVPLLAESSLQPTTHSNQSL*FRSWNL Trigger: CAGATTCCAGCTTCGGAACAAGAGACTCTGGTTAGA...GTGAGTTGTGGGCTGCAGAGAAGACTCAGCCAGTAAAGGCACCTGCTGTGTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000155285.8 |
||
| CDS-3UTR CAA 90 bp | AGTACTTCTGTAGCCCTTGATGAGGAAGGTCCACCATCATCTGCAGGAGATGGAAGGGTCCAGCATCTTTaGCAGTGTGATGGAAGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: STSVALDEEGPPSSAGDGRVQHL*QCDGRG Trigger: TCCCCTTCCATCACACTGCAAAAGATGCTGGACCCT...TCCATCTCCTGCAGATGATGGTGGACCTTCCTCATCAAGGGCTACAGAAGTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR CAA 90 bp | CCGCCTCCTATTCAAATGCTGTCACGTGGGAGGAGTGTTCTTGTTCTTGTCTCTTCCACACTCTCGTCTTaGTCCTGCGTTTCCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PPPIQMLSRGRSVLVLVSSTLSS*SCVSSF Trigger: GAAGGAGGAAACGCAGGACAAAGACGAGAGTGTGGA...AGAGACAAGAACAAGAACACTCCTCCCACGTGACAGCATTTGAATAGGAGGCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS GCA 90 bp | GATCACTCCCACCTTCAGGCTGACGTCTGCTCTCACTCAGCGATGTaGCAGAGTCTTGCTGACTTACAGCCACTAAATTTCTGTAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: DHSHLQADVCSHSAM*QSLADLQPLNFCRS Trigger: TGATCTACAGAAATTTAGTGGCTGTAAGTCAGCAAGACTCTGGCACATCGCTGAGTGAGAGCAGACGTCAGCCTGAAGGTGGGAGTGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
||
| CDS-3UTR CAA 90 bp | TCCTGGGGGTTCCAAGGATCAAATGTGTGTCAGTGGGTGTACACAGCAGGTGCCCTCTTTCACGCTTTCTaGGCTGCTATAAACAATGCT | + |
|
Preference number: 5 (lower is better) Translates to: SWGFQGSNVCQWVYTAGALFHAF*AAINNA Trigger: AGCATTGTTTATAGCAGCCAAGAAAGCGTGAAAGAG...GGCACCTGCTGTGTACACCCACTGACACACATTTGATCCTTGGAACCCCCAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR CAA 90 bp | GATGAGGAAGGTCCACCATCATCTGCAGGAGATGGAAAGGACTTCTCACATACAGCACAATCATTTGGATaGGCTGTCTGCACACTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: DEEGPPSSAGDGKDFSHTAQSFG*AVCTLG Trigger: GCCCAGTGTGCAGACAGCCAATCCAAATGATTGTGC...TGTATGTGAGAAGTCCTTTCCATCTCCTGCAGATGATGGTGGACCTTCCTCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR CAA 90 bp | AAAAGGCGCTTCTACCAGCCTCAGGCTTTTCAACCTGGGACAAACTGCAACACTTTCTCTGTCAGCTTTTaGCCATCAGGCACATCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: KRRFYQPQAFQPGTNCNTFSVSF*PSGTSK Trigger: CTTGGATGTGCCTGATGGCAAAAAGCTGACAGAGAA...AGTGTTGCAGTTTGTCCCAGGTTGAAAAGCCTGAGGCTGGTAGAAGCGCCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
||
| CDS-3UTR CAA 90 bp | AGGAGATGGAAAGGACTTCTCACATACACTTCCAAAGTCCTTCCAAGCGGAGATTCCACACTCTCGTCTTaGTCCTGCGTTTCCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RRWKGLLTYTSKVLPSGDSTLSS*SCVSSF Trigger: GAAGGAGGAAACGCAGGACAAAGACGAGAGTGTGGA...ATCTCCGCTTGGAAGGACTTTGGAAGTGTATGTGAGAAGTCCTTTCCATCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
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| CDS-3UTR CAA 90 bp | CCACCGCCTCCTATTCAAATGCTGTCACGTGGGAGGAGTGTTCTTGTTCTTGTCCTCTTTCACGCTTTCTaGGCTGCTATAAACAATGCT | + |
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Preference number: 5 (lower is better) Translates to: PPPPIQMLSRGRSVLVLVLFHAF*AAINNA Trigger: AGCATTGTTTATAGCAGCCAAGAAAGCGTGAAAGAG...GACAAGAACAAGAACACTCCTCCCACGTGACAGCATTTGAATAGGAGGCGGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
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| CDS-3UTR CAA 90 bp | CCACCGCCTCCTATTCAAATGCTGTCACGTGGGAGGAGTGTTCTTGTTCTTGTCCTCCTAGGAGATCATTaGAACAATACACAATGTGCT | + |
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Preference number: 5 (lower is better) Translates to: PPPPIQMLSRGRSVLVLVLLGDH*NNTQCA Trigger: AGCACATTGTGTATTGTTCAAATGATCTCCTAGGAG...GACAAGAACAAGAACACTCCTCCCACGTGACAGCATTTGAATAGGAGGCGGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
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| CDS-3UTR CAA 90 bp | CCTCCTATTCAAATGCTGTCACGTGGGAGGAGTGTTCTTGTTCTTGTCTCTGAAGGAGGATTCATTTCATaGCATGAGGTACACTTCCAA | + |
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Preference number: 5 (lower is better) Translates to: PPIQMLSRGRSVLVLVSEGGFIS*HEVHFQ Trigger: TTGGAAGTGTACCTCATGCAATGAAATGAATCCTCC...TTCAGAGACAAGAACAAGAACACTCCTCCCACGTGACAGCATTTGAATAGGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
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| CDS-3UTR CAA 90 bp | TACATACCACCAGATGCAATTCATGCCTTTAAAACTGTGTGTGTGTGTGTGTGTTCTAACCAGAGTCTCTaGTTCCGAAGCTGGAATCTG | + |
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Preference number: 5 (lower is better) Translates to: YIPPDAIHAFKTVCVCVCSNQSL*FRSWNL Trigger: CAGATTCCAGCTTCGGAACAAGAGACTCTGGTTAGA...ACACACACACACACACACAGTTTTAAAGGCATGAATTGCATCTGGTGGTATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000155285.8 |
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| CDS-3UTR CAA 90 bp | TTATGTTTTCTATACTTAGACGTGACCCTTCAATCAAAGGGAAGAGGCCTATTATTCTCTGTCAGCTTTTaGCCATCAGGCACATCCAAG | + |
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Preference number: 5 (lower is better) Translates to: LCFLYLDVTLQSKGRGLLFSVSF*PSGTSK Trigger: CTTGGATGTGCCTGATGGCAAAAAGCTGACAGAGAA...TAATAGGCCTCTTCCCTTTGATTGAAGGGTCACGTCTAAGTATAGAAAACATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
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| CDS-3UTR CAA 90 bp | ACAGTTTTATGTTTTCTATACTTAGACGTGACCCTTCAATCAAAGGGAAGAGGCCTCCTAGGAGATCATTaGAACAATACACAATGTGCT | + |
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Preference number: 5 (lower is better) Translates to: TVLCFLYLDVTLQSKGRGLLGDH*NNTQCA Trigger: AGCACATTGTGTATTGTTCAAATGATCTCCTAGGAG...GCCTCTTCCCTTTGATTGAAGGGTCACGTCTAAGTATAGAAAACATAAAACTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
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| CDS GCA 90 bp | AACACATCTCCTAGGAGATCATTTGAACAATACACAATGTGCTGCTaGTTCTCGTCATATAACCTCTTAGTCATAATATACTGGCCAATA | + |
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Preference number: 5 (lower is better) Translates to: NTSPRRSFEQYTMCC*FSSYNLLVIIYWPI Trigger: TATTGGCCAGTATATTATGACTAAGAGGTTATATGACGAGAAGCAGCAGCACATTGTGTATTGTTCAAATGATCTCCTAGGAGATGTGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
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| CDS GCA 72 bp | CGCTGCTGCTGCTGCTACTGCTGCTGCTGCCGCCGCTaGACATCTCCCTCAGCTCACACAGACCCAGGCTCG | + |
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Preference number: 6 (lower is better) Translates to: RCCCCYCCCCRR*TSPSAHTDPGS Trigger: CGAGCCTGGGTCTGTGTGAGCTGAGGGAGATGTGCAGCGGCGGCAGCAGCAGCAGTAGCAGCAGCAGCAGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
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| CDS GCA 72 bp | TCTCTGTGGACTCGCTGCTGCTGCTGCTACTGCTGCTaGTGCCGCCGCTGCACATCTCCCTCAGCTCACACA | + |
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Preference number: 6 (lower is better) Translates to: SLWTRCCCCYCC*CRRCTSPSAHT Trigger: TGTGTGAGCTGAGGGAGATGTGCAGCGGCGGCAGCAGCAGCAGTAGCAGCAGCAGCAGCGAGTCCACAGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
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| CDS GCA 72 bp | CTCGGATCAAAGGACAGGGACCTGCGGCGCTTCCGGTaGCGCTCCCCAGGTAGCTCATCTGTGTTCTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LGSKDRDLRRFR*RSPGSSSVFSS Trigger: AGAAGAGAACACAGATGAGCTACCTGGGGAGCGGCACCGGAAGCGCCGCAGGTCCCTGTCCTTTGATCCGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
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| CDS GCA 72 bp | GATCCTTCAGATCACTCCCACCTTCAGGCTGACGTCTaGTCTCACTCAGCGATGTGCCAGAGTCTTGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: DPSDHSHLQADV*SHSAMCQSLAD Trigger: GTCAGCAAGACTCTGGCACATCGCTGAGTGAGAGCAGACGTCAGCCTGAAGGTGGGAGTGATCTGAAGGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 |
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| CDS GCA 72 bp | TCTTCTTCAGATCACTCCCACCTTCAGGCTGACGTCTaGTCTCACTCAGCGATGTGCCAGAGTCTTGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: SSSDHSHLQADV*SHSAMCQSLAD Trigger: GTCAGCAAGACTCTGGCACATCGCTGAGTGAGAGCAGACGTCAGCCTGAAGGTGGGAGTGATCTGAAGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
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| CDS TCA 72 bp | TGTGTTCTCTTCTTCAGATCACTCCCACCTTCAGGCTaGCGTCTGCTCTCACTCAGCGATGTGCCAGAGTCT | + |
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Preference number: 6 (lower is better) Translates to: CVLFFRSLPPSG*RLLSLSDVPES Trigger: AGACTCTGGCACATCGCTGAGTGAGAGCAGACGTCAGCCTGAAGGTGGGAGTGATCTGAAGAAGAGAACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155285.8 |
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| CDS CAA 72 bp | AACTCGGGACTCCAAACACATCTCCTAGGAGATCATTaGAACAATACACAATGTGCTGCTGCTTCTCGTCAT | + |
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Preference number: 6 (lower is better) Translates to: NSGLQTHLLGDH*NNTQCAAASRH Trigger: ATGACGAGAAGCAGCAGCACATTGTGTATTGTTCAAATGATCTCCTAGGAGATGTGTTTGGAGTCCCGAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
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| CDS CAA 90 bp | TCACAGAGAAACTCGGGACTCCAAACACATCTCCTAGGAGATCATTaGAACAATACACAATGTGCTGCTGCTTCTCGTCATATAACCTCT | + |
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Preference number: 6 (lower is better) Translates to: SQRNSGLQTHLLGDH*NNTQCAAASRHITS Trigger: AGAGGTTATATGACGAGAAGCAGCAGCACATTGTGTATTGTTCAAATGATCTCCTAGGAGATGTGTTTGGAGTCCCGAGTTTCTCTGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
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| CDS CAA 90 bp | TGCCAGAGTCTTGCTGACTTACAGCCACTAAATTTCTGTAGATCATaGCATATATTTTCCTGTGCTCCTTCACAGAGAAACTCGGGACTC | + |
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Preference number: 6 (lower is better) Translates to: CQSLADLQPLNFCRS*HIFSCAPSQRNSGL Trigger: GAGTCCCGAGTTTCTCTGTGAAGGAGCACAGGAAAATATATGCAATGATCTACAGAAATTTAGTGGCTGTAAGTCAGCAAGACTCTGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
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| CDS GCA 72 bp | CCTAGGAGATCATTTGAACAATACACAATGTGCTGCTaGTTCTCGTCATATAACCTCTTAGTCATAATATAC | + |
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Preference number: 6 (lower is better) Translates to: PRRSFEQYTMCC*FSSYNLLVIIY Trigger: GTATATTATGACTAAGAGGTTATATGACGAGAAGCAGCAGCACATTGTGTATTGTTCAAATGATCTCCTAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020408.16 ENSMUST00000105263.9 ENSMUST00000155285.8 |
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