Pregenerated sensors for MDM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020212Ensembl transcript IDs: ENSMUST00000020437.13, ENSMUST00000163238.9, ENSMUST00000164077.9, ENSMUST00000169817.3, ENSMUST00000219087.2
Found 318 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTCTGCCCACCAATCTCACACATCACCTTCCATGGACCCCTGTATaGCCTGGCTTTCTCAACAAGTCACAGATTCTCCTCCAGCACTCC | + |
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Preference number: 1 (lower is better) Translates to: PLPTNLTHHLPWTPV*PGFLNKSQILLQHS Trigger: GGAGTGCTGGAGGAGAATCTGTGACTTGTTGAGAAAGCCAGGGCATACAGGGGTCCATGGAAGGTGATGTGTGAGATTGGTGGGCAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
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| 3UTR CCA 90 bp | GCCCACCAATCTCACACATCACCTTCCATGGACCCCTGTATGCCCTaGCTTTCTCAACAAGTCACAGATTCTCCTCCAGCACTCCTGGGT | + |
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Preference number: 1 (lower is better) Translates to: AHQSHTSPSMDPCMP*LSQQVTDSPPALLG Trigger: ACCCAGGAGTGCTGGAGGAGAATCTGTGACTTGTTGAGAAAGCCAGGGCATACAGGGGTCCATGGAAGGTGATGTGTGAGATTGGTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGCCCACCAATCTCACACATCACCTTCCATGGACCCCTGTATGCCCTGGCTTTCCAGCACTCCTGGGTaGCTCCAGGCTTCCAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: SAHQSHTSPSMDPCMPWLSSTPG*LQASSQ Trigger: CTGACTGGAAGCCTGGAGCCACCCAGGAGTGCTGGA...AAGCCAGGGCATACAGGGGTCCATGGAAGGTGATGTGTGAGATTGGTGGGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCTTTCTCAACAAGTCACAGATTCTCCTCCAGCACTCCTGGGTGGCTCCAGGGTGCTTTTGGGGACCTaGTGCAAGCCAGCTGTGACA | + |
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Preference number: 2 (lower is better) Translates to: WLSQQVTDSPPALLGGSRVLLGT*CKPAVT Trigger: TGTCACAGCTGGCTTGCAGCAGGTCCCCAAAAGCAC...CCTGGAGCCACCCAGGAGTGCTGGAGGAGAATCTGTGACTTGTTGAGAAAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
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| 3UTR-3UTR CCA 90 bp | CCCACCAATCTCACACATCACCTTCCATGGACCCCTGTATGCCCTGGCTTTCTCAAGAGGGTGAGTGCCTaGAGAACGAACTGTGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: PTNLTHHLPWTPVCPGFLKRVSA*RTNCGR Trigger: CCTCCCACAGTTCGTTCTCCAGGCACTCACCCTCTT...GAGAAAGCCAGGGCATACAGGGGTCCATGGAAGGTGATGTGTGAGATTGGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGCCCACCAATCTCACACATCACCTTCCATGGACCCCTGTATGCCCTGGCTTCCACCTCTGCTTATGTaGTTTTGGGGACCTGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: SAHQSHTSPSMDPCMPWLPPLLM*FWGPAA Trigger: TGCAGCAGGTCCCCAAAAGCACATAAGCAGAGGTGG...AAGCCAGGGCATACAGGGGTCCATGGAAGGTGATGTGTGAGATTGGTGGGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGGCTTTCTCAACAAGTCACAGATTCTCCTCCAGCACTCCTGGGTGGCTCCACTGCTTATGTGCTTTTaGGGACCTGCTGCAAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: PGFLNKSQILLQHSWVAPLLMCF*GPAASQ Trigger: CTGGCTTGCAGCAGGTCCCCAAAAGCACATAAGCAG...TGGAGCCACCCAGGAGTGCTGGAGGAGAATCTGTGACTTGTTGAGAAAGCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
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| 3UTR-3UTR TCA 90 bp | CCCACCAATCTCACACATCACCTTCCATGGACCCCTGTATGCCCTGGCTTTCTCCTTCCAGTCAGTGGCTaGAGTAGATTAGGAAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: PTNLTHHLPWTPVCPGFLLPVSG*SRLGRG Trigger: CCCTCTTCCTAATCTACTTCAGCCACTGACTGGAAG...GAGAAAGCCAGGGCATACAGGGGTCCATGGAAGGTGATGTGTGAGATTGGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
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| 3UTR-3UTR CCA 90 bp | CATCACCTTCCATGGACCCCTGTATGCCCTGGCTTTCTCAACAAGTCACAGATTCTGGAGAACGAACTGTaGGAGGCAGTGAGATGTCCC | + |
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Preference number: 2 (lower is better) Translates to: HHLPWTPVCPGFLNKSQILENEL*EAVRCP Trigger: GGGACATCTCACTGCCTCCCACAGTTCGTTCTCCAG...AATCTGTGACTTGTTGAGAAAGCCAGGGCATACAGGGGTCCATGGAAGGTGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCCATGGACCCCTGTATGCCCTGGCTTTCTCAACAAGTCACAGATTCTCCTCGAACGGCAAGATCTTTaGGAGCTAGCCAGAACTCTC | + |
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Preference number: 2 (lower is better) Translates to: LPWTPVCPGFLNKSQILLERQDL*ELARTL Trigger: GAGAGTTCTGGCTAGCTCTCAAAGATCTTGCCGTTC...GAGGAGAATCTGTGACTTGTTGAGAAAGCCAGGGCATACAGGGGTCCATGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
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| 3UTR-3UTR GCA 90 bp | GAGAACGAACTGTGGGAGGCAGTGAGATGTCCCACACACGCCCCTGCCACCTCTACAGCTGAGATTGTTTaGTTTCTTGCTGGTACAATA | + |
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Preference number: 2 (lower is better) Translates to: ENELWEAVRCPTHAPATSTAEIV*FLAGTI Trigger: TATTGTACCAGCAAGAAAGCAAACAATCTCAGCTGT...AGAGGTGGCAGGGGCGTGTGTGGGACATCTCACTGCCTCCCACAGTTCGTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGCCCACCAATCTCACACATCACCTTCCATGGACCCCTGTATGCCCTGGCTTGAACTCTCTTCTTTTTaGCTCCTGACAGCTGAGATT | + |
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Preference number: 2 (lower is better) Translates to: SAHQSHTSPSMDPCMPWLELSSF*LLTAEI Trigger: AATCTCAGCTGTCAGGAGGCAAAAAGAAGAGAGTTC...AAGCCAGGGCATACAGGGGTCCATGGAAGGTGATGTGTGAGATTGGTGGGCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
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| 3UTR-3UTR GCA 90 bp | CCCACCAATCTCACACATCACCTTCCATGGACCCCTGTATGCCCTGGCTTTCTCGATTGTTTGCTTTCTTaGTGGTACAATAGGAAAGTC | + |
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Preference number: 2 (lower is better) Translates to: PTNLTHHLPWTPVCPGFLDCLLS*WYNRKV Trigger: GACTTTCCTATTGTACCAGCAAGAAAGCAAACAATC...GAGAAAGCCAGGGCATACAGGGGTCCATGGAAGGTGATGTGTGAGATTGGTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
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| 3UTR-3UTR CCA 90 bp | CCCACCAATCTCACACATCACCTTCCATGGACCCCTGTATGCCCTGGCTTTCTCTGTTTGCTTTCTTGCTaGTACAATAGGAAAGTCAAA | + |
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Preference number: 2 (lower is better) Translates to: PTNLTHHLPWTPVCPGFLCLLSC*YNRKVK Trigger: TTTGACTTTCCTATTGTACCAGCAAGAAAGCAAACA...GAGAAAGCCAGGGCATACAGGGGTCCATGGAAGGTGATGTGTGAGATTGGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCCTTTAGAATATTCTGTAGATGACCTTCAGGCTTCTACTAGCAACCCCCGAAGACAAGTGCAAAGGTaGTCTCAAAGAGTCAGACTT | + |
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Preference number: 2 (lower is better) Translates to: LPLEYSVDDLQASTSNPRRQVQR*SQRVRL Trigger: AAGTCTGACTCTTTGAGAGCACCTTTGCACTTGTCT...TCGGGGGTTGCTAGTAGAAGCCTGAAGGTCATCTACAGAATATTCTAAAGGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
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| 3UTR-3UTR GCA 90 bp | CTTAACACTGCACCTGTGTATACAGAAGGCGCTAATAAAACAGTGAGATTCTTTAGACAAGTGCAAAGGTaGTCTCAAAGAGTCAGACTT | + |
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Preference number: 2 (lower is better) Translates to: LNTAPVYTEGANKTVRFFRQVQR*SQRVRL Trigger: AAGTCTGACTCTTTGAGAGCACCTTTGCACTTGTCT...AAAGAATCTCACTGTTTTATTAGCGCCTTCTGTATACACAGGTGCAGTGTTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
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| 3UTR-3UTR CAA 90 bp | TGCCCACCAATCTCACACATCACCTTCCATGGACCCCTGTATGCCCTGGCTTTCATAGGCACAGGTCAGTaGAGCTCCCGGCCAGAGAAA | + |
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Preference number: 3 (lower is better) Translates to: CPPISHITFHGPLYALAFIGTGQ*SSRPEK Trigger: TTTCTCTGGCCGGGAGCTCAACTGACCTGTGCCTAT...GAAAGCCAGGGCATACAGGGGTCCATGGAAGGTGATGTGTGAGATTGGTGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
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| 3UTR CCA 72 bp | TCTCACACATCACCTTCCATGGACCCCTGTATGCCCTaGCTTTCTCAACAAGTCACAGATTCTCCTCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: SHTSPSMDPCMP*LSQQVTDSPPA Trigger: TGCTGGAGGAGAATCTGTGACTTGTTGAGAAAGCCAGGGCATACAGGGGTCCATGGAAGGTGATGTGTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
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| 3UTR GCA 72 bp | CAACCCCGCACCTTTGTACTCAGACAAGTGCAAAGGTaGTCTCAAAGAGTCAGACTTAGACACAGCTGCATG | + |
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Preference number: 3 (lower is better) Translates to: QPRTFVLRQVQR*SQRVRLRHSCM Trigger: CATGCAGCTGTGTCTAAGTCTGACTCTTTGAGAGCACCTTTGCACTTGTCTGAGTACAAAGGTGCGGGGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
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| 3UTR GCA 72 bp | ACCAATCTCACACATCACCTTCCATGGACCCCTGTATaGCCTGGCTTTCTCAACAAGTCACAGATTCTCCTC | + |
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Preference number: 3 (lower is better) Translates to: TNLTHHLPWTPV*PGFLNKSQILL Trigger: GAGGAGAATCTGTGACTTGTTGAGAAAGCCAGGGCATACAGGGGTCCATGGAAGGTGATGTGTGAGATTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
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| 3UTR-3UTR CAA 90 bp | CTCCCTTTAGAATATTCTGTAGATGACCTTCAGGCTTCTACTAGCAACCCCCGACACAACCCCGCACCTTaGTACTCAGACAAGTGCAAA | + |
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Preference number: 3 (lower is better) Translates to: LPLEYSVDDLQASTSNPRHNPAP*YSDKCK Trigger: TTTGCACTTGTCTGAGTACAAAGGTGCGGGGTTGTG...TCGGGGGTTGCTAGTAGAAGCCTGAAGGTCATCTACAGAATATTCTAAAGGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
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| 3UTR TCA 72 bp | ATGACCTTCAGGCTTCTACTAGCAACCCCCGAGACCTaGCACAAAAGTCAAGAGTGTGTGAAGAAATACACA | + |
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Preference number: 3 (lower is better) Translates to: MTFRLLLATPET*HKSQECVKKYT Trigger: TGTGTATTTCTTCACACACTCTTGACTTTTGTGTCAGGTCTCGGGGGTTGCTAGTAGAAGCCTGAAGGTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
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| 3UTR-3UTR CAA 90 bp | CTTAACACTGCACCTGTGTATACAGAAGGCGCTAATAAAACAGTGAGATTCTTTCACAACCCCGCACCTTaGTACTCAGACAAGTGCAAA | + |
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Preference number: 3 (lower is better) Translates to: LNTAPVYTEGANKTVRFFHNPAP*YSDKCK Trigger: TTTGCACTTGTCTGAGTACAAAGGTGCGGGGTTGTG...AAAGAATCTCACTGTTTTATTAGCGCCTTCTGTATACACAGGTGCAGTGTTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
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| 3UTR GCA 72 bp | CTCTCTTCTTTTTGCCTCCTGACAGCTGAGATTGTTTaGTTTCTTGCTGGTACAATAGGAAAGTCAAACAAG | + |
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Preference number: 3 (lower is better) Translates to: LSSFCLLTAEIV*FLAGTIGKSNK Trigger: CTTGTTTGACTTTCCTATTGTACCAGCAAGAAAGCAAACAATCTCAGCTGTCAGGAGGCAAAAAGAAGAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
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| 3UTR TCA 72 bp | CTTAGACACAGCTGCATGGCAATTTTCTGGCTAAGATaGGCCACTGAAAATTCAAATTATCTGAGTCAGAAG | + |
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Preference number: 3 (lower is better) Translates to: LRHSCMAIFWLR*ATENSNYLSQK Trigger: CTTCTGACTCAGATAATTTGAATTTTCAGTGGCTCATCTTAGCCAGAAAATTGCCATGCAGCTGTGTCTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
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| CDS-3UTR GCA 90 bp | GAGTGCCTGGAGAACGAACTGTGGGAGGCAGTGAGATGTCCCACACACGCCCCTCTCGTGACACCCTGGTaGTTTTCCACAGTGTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: ECLENELWEAVRCPTHAPLVTPW*FSTVSE Trigger: TTCAGACACTGTGGAAAAGCACCAGGGTGTCACGAG...AGGGGCGTGTGTGGGACATCTCACTGCCTCCCACAGTTCGTTCTCCAGGCACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
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| CDS-3UTR CCA 90 bp | GAATATTCTGTAGATGACCTTCAGGCTTCTACTAGCAACCCCCGAGACCTGACACGTCCTCCTCCGCCCTaGGCTCCTCCTGGGTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: EYSVDDLQASTSNPRDLTRPPPP*APPGCL Trigger: AAGACACCCAGGAGGAGCCCAGGGCGGAGGAGGACG...TGTCAGGTCTCGGGGGTTGCTAGTAGAAGCCTGAAGGTCATCTACAGAATATTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
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| CDS-3UTR CCA 90 bp | GAATATTCTGTAGATGACCTTCAGGCTTCTACTAGCAACCCCCGAGACCTGACAGTAAGGCGGGGCACATaGAGGCAGCTGCCCAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: EYSVDDLQASTSNPRDLTVRRGT*RQLPRG Trigger: ACCCCTGGGCAGCTGCCTCCATGTGCCCCGCCTTAC...TGTCAGGTCTCGGGGGTTGCTAGTAGAAGCCTGAAGGTCATCTACAGAATATTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
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| CDS-3UTR CCA 90 bp | CTTCCATGGACCCCTGTATGCCCTGGCTTTCTCAACAAGTCACAGATTCTCCTCAGCCTCTTGTGGCTTTaGCGTTCCAAAGGCCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: LPWTPVCPGFLNKSQILLSLLWL*RSKGLG Trigger: CCCCAGGCCTTTGGAACGCCAAAGCCACAAGAGGCT...GAGGAGAATCTGTGACTTGTTGAGAAAGCCAGGGCATACAGGGGTCCATGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
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| CDS-3UTR CCA 90 bp | GAATATTCTGTAGATGACCTTCAGGCTTCTACTAGCAACCCCCGAGACCTGACAGCCCTGGGCTCCTCCTaGGTGTCTTCCTTCGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: EYSVDDLQASTSNPRDLTALGSS*VSSFVL Trigger: GAGCACGAAGGAAGACACCCAGGAGGAGCCCAGGGC...TGTCAGGTCTCGGGGGTTGCTAGTAGAAGCCTGAAGGTCATCTACAGAATATTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
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| CDS-3UTR TCA 90 bp | CCCACCAATCTCACACATCACCTTCCATGGACCCCTGTATGCCCTGGCTTTCTCCTTTTCCACAGTGTCTaGAACCCCTTCAGCTCTCGA | + |
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Preference number: 4 (lower is better) Translates to: PTNLTHHLPWTPVCPGFLLFHSV*NPFSSR Trigger: TCGAGAGCTGAAGGGGTTTCAGACACTGTGGAAAAG...GAGAAAGCCAGGGCATACAGGGGTCCATGGAAGGTGATGTGTGAGATTGGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
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| CDS-3UTR CCA 90 bp | CCCACCAATCTCACACATCACCTTCCATGGACCCCTGTATGCCCTGGCTTTCTCTTCTCTTGGGAACCCTaGAGGCCTCTAGTGAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: PTNLTHHLPWTPVCPGFLFSWEP*RPLVRE Trigger: TTCTCTCACTAGAGGCCTCCAGGGTTCCCAAGAGAA...GAGAAAGCCAGGGCATACAGGGGTCCATGGAAGGTGATGTGTGAGATTGGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
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| CDS-3UTR CCA 90 bp | TGGCTTTCTCAACAAGTCACAGATTCTCCTCCAGCACTCCTGGGTGGCTCCAGGCACAGGAAGTTTCTCTaGTATTCACTCAGCCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: WLSQQVTDSPPALLGGSRHRKFL*YSLSPL Trigger: CAAGGGGCTGAGTGAATACCAGAGAAACTTCCTGTG...CCTGGAGCCACCCAGGAGTGCTGGAGGAGAATCTGTGACTTGTTGAGAAAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
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| CDS-3UTR CCA 90 bp | CTCCCTTTAGAATATTCTGTAGATGACCTTCAGGCTTCTACTAGCAACCCCCGAGGCGTTCCAAAGGCCTaGGGTTCTGGTGGGACAAGC | + |
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Preference number: 4 (lower is better) Translates to: LPLEYSVDDLQASTSNPRGVPKA*GSGGTS Trigger: GCTTGTCCCACCAGAACCCCAGGCCTTTGGAACGCC...TCGGGGGTTGCTAGTAGAAGCCTGAAGGTCATCTACAGAATATTCTAAAGGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
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| CDS-3UTR CCA 90 bp | GCCAGCTTTTCAAAGTCCAATCATCTTAACACTGCACCTGTGTATACAGAAGGCGCCCTGGGCTCCTCCTaGGTGTCTTCCTTCGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: ASFSKSNHLNTAPVYTEGALGSS*VSSFVL Trigger: GAGCACGAAGGAAGACACCCAGGAGGAGCCCAGGGC...GCCTTCTGTATACACAGGTGCAGTGTTAAGATGATTGGACTTTGAAAAGCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
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| CDS-3UTR CCA 90 bp | CTTCCATGGACCCCTGTATGCCCTGGCTTTCTCAACAAGTCACAGATTCTCCTCTGGCTCTTCCTACCCTaGGATCTATGCTCTGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: LPWTPVCPGFLNKSQILLWLFLP*DLCSGR Trigger: TCTCCCAGAGCATAGATCCCAGGGTAGGAAGAGCCA...GAGGAGAATCTGTGACTTGTTGAGAAAGCCAGGGCATACAGGGGTCCATGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
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| CDS-3UTR TCA 90 bp | CTCCCTTTAGAATATTCTGTAGATGACCTTCAGGCTTCTACTAGCAACCCCCGACTCGGATGTTGCTACTaGCGGTGCCTTCCGAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: LPLEYSVDDLQASTSNPRLGCCY*RCLPSL Trigger: CAAGCTCGGAAGGCACCGTCAGTAGCAACATCCGAG...TCGGGGGTTGCTAGTAGAAGCCTGAAGGTCATCTACAGAATATTCTAAAGGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
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| CDS-3UTR TCA 90 bp | TCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACACACAAGCCAGCTTCCTCCTaGCCGAGGCGGCAGGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: SESEVLEETPNPLKTLTHKPASS*PRRQAL Trigger: CAGAGCCTGCCGCCTCGGTCAGGAGGAAGCTGGCTT...GTGTGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
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| CDS-3UTR GCA 90 bp | CTCCCTTTAGAATATTCTGTAGATGACCTTCAGGCTTCTACTAGCAACCCCCGACCGGAGGCTGGAAACTaGAGAGCGAGCAGAGATCTC | + |
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Preference number: 4 (lower is better) Translates to: LPLEYSVDDLQASTSNPRPEAGN*RASRDL Trigger: GAGATCTCTGCTCGCTCTGCAGTTTCCAGCCTCCGG...TCGGGGGTTGCTAGTAGAAGCCTGAAGGTCATCTACAGAATATTCTAAAGGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
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| CDS-3UTR CCA 90 bp | CATCACCTTCCATGGACCCCTGTATGCCCTGGCTTTCTCAACAAGTCACAGATTTTGCTCAGCCTCTTGTaGCTTTGGCGTTCCAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: HHLPWTPVCPGFLNKSQILLSLL*LWRSKG Trigger: GCCTTTGGAACGCCAAAGCCACAAGAGGCTGAGCAA...AATCTGTGACTTGTTGAGAAAGCCAGGGCATACAGGGGTCCATGGAAGGTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
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| CDS-3UTR CCA 90 bp | TCTGCCCACCAATCTCACACATCACCTTCCATGGACCCCTGTATGCCCTGGCTTGAACTGCTTCTTGATTaGCATCTTCTCCTTGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: SAHQSHTSPSMDPCMPWLELLLD*HLLLAQ Trigger: CTGAGCAAGGAGAAGATGCCAATCAAGAAGCAGTTC...AAGCCAGGGCATACAGGGGTCCATGGAAGGTGATGTGTGAGATTGGTGGGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
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| CDS-3UTR TCA 90 bp | CTCCCTTTAGAATATTCTGTAGATGACCTTCAGGCTTCTACTAGCAACCCCCGATTCCGAGCTTGTGACTaGGGAGACGTCCCAACAGCA | + |
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Preference number: 4 (lower is better) Translates to: LPLEYSVDDLQASTSNPRFRACD*GDVPTA Trigger: TGCTGTTGGGACGTCTCCTCAGTCACAAGCTCGGAA...TCGGGGGTTGCTAGTAGAAGCCTGAAGGTCATCTACAGAATATTCTAAAGGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
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| CDS-3UTR TCA 90 bp | CTTAACACTGCACCTGTGTATACAGAAGGCGCTAATAAAACAGTGAGATTCTTTAAGCCAGCTTCCTCCTaGCCGAGGCGGCAGGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: LNTAPVYTEGANKTVRFFKPASS*PRRQAL Trigger: CAGAGCCTGCCGCCTCGGTCAGGAGGAAGCTGGCTT...AAAGAATCTCACTGTTTTATTAGCGCCTTCTGTATACACAGGTGCAGTGTTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
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| CDS-3UTR GCA 90 bp | CTCCCTTTAGAATATTCTGTAGATGACCTTCAGGCTTCTACTAGCAACCCCCGATCTACCGCACAGGTCTaGTTGTCCTGTCCTCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: LPLEYSVDDLQASTSNPRSTAQV*LSCPLS Trigger: GGAGAGAGGACAGGACAAGCAGACCTGTGCGGTAGA...TCGGGGGTTGCTAGTAGAAGCCTGAAGGTCATCTACAGAATATTCTAAAGGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
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| CDS-3UTR CCA 90 bp | GAATATTCTGTAGATGACCTTCAGGCTTCTACTAGCAACCCCCGAGACCTGACAGCATCTCCAGTCTCCTaGTGGAGTTTTTCAGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EYSVDDLQASTSNPRDLTASPVS*WSFSGA Trigger: AGCCCCTGAAAAACTCCACCAGGAGACTGGAGATGC...TGTCAGGTCTCGGGGGTTGCTAGTAGAAGCCTGAAGGTCATCTACAGAATATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | GCCAGCTTTTCAAAGTCCAATCATCTTAACACTGCACCTGTGTATACAGAAGGCTGCGCCACCAACAGCTaGCGTCGTGAGATCATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ASFSKSNHLNTAPVYTEGCATNS*RREIMV Trigger: CACCATGATCTCACGACGCCAGCTGTTGGTGGCGCA...GCCTTCTGTATACACAGGTGCAGTGTTAAGATGATTGGACTTTGAAAAGCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | GAATATTCTGTAGATGACCTTCAGGCTTCTACTAGCAACCCCCGAGACCTGACACTGCTCGAGGCCTGGTaGCTTCACTTTAGATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EYSVDDLQASTSNPRDLTLLEAW*LHFRWR Trigger: TCTCCATCTAAAGTGAAGCCACCAGGCCTCGAGCAG...TGTCAGGTCTCGGGGGTTGCTAGTAGAAGCCTGAAGGTCATCTACAGAATATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | CTTAACACTGCACCTGTGTATACAGAAGGCGCTAATAAAACAGTGAGATTCTTTGTAAGGCGGGGCACATaGAGGCAGCTGCCCAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LNTAPVYTEGANKTVRFFVRRGT*RQLPRG Trigger: ACCCCTGGGCAGCTGCCTCCATGTGCCCCGCCTTAC...AAAGAATCTCACTGTTTTATTAGCGCCTTCTGTATACACAGGTGCAGTGTTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | GAATATTCTGTAGATGACCTTCAGGCTTCTACTAGCAACCCCCGAGACCTGACACTTCTCGTGACACCCTaGTGCTTTTCCACAGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: EYSVDDLQASTSNPRDLTLLVTP*CFSTVS Trigger: AGACACTGTGGAAAAGCACCAGGGTGTCACGAGAAG...TGTCAGGTCTCGGGGGTTGCTAGTAGAAGCCTGAAGGTCATCTACAGAATATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | GAATATTCTGTAGATGACCTTCAGGCTTCTACTAGCAACCCCCGAGACCTGACAGATGCCTATCCAACCTaGGATCTATGCTCTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EYSVDDLQASTSNPRDLTDAYPT*DLCSGR Trigger: TCTCCCAGAGCATAGATCCCAGGTTGGATAGGCATC...TGTCAGGTCTCGGGGGTTGCTAGTAGAAGCCTGAAGGTCATCTACAGAATATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | CTCCCTTTAGAATATTCTGTAGATGACCTTCAGGCTTCTACTAGCAACCCCCGATCTCCAGTCTCCTGGTaGAGTTTTTCAGGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPLEYSVDDLQASTSNPRSPVSW*SFSGAA Trigger: AGCAGCCCCTGAAAAACTCCACCAGGAGACTGGAGA...TCGGGGGTTGCTAGTAGAAGCCTGAAGGTCATCTACAGAATATTCTAAAGGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | TTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACACGTCCTCCTCCGCCCTaGGCTCCTCCTGGGTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSESEVLEETPNPLKTLTRPPPP*APPGCL Trigger: AAGACACCCAGGAGGAGCCCAGGGCGGAGGAGGACG...TGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR TCA 90 bp | CCTGGCTTTCTCAACAAGTCACAGATTCTCCTCCAGCACTCCTGGGTGGCTCCAGGGATTATAAGACTCTaGCAAATAGGACTTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PGFLNKSQILLQHSWVAPGIIRL*QIGLFP Trigger: TGGAAAAAGTCCTATTTGTCAGAGTCTTATAATCCC...TGGAGCCACCCAGGAGTGCTGGAGGAGAATCTGTGACTTGTTGAGAAAGCCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
||
| CDS-3UTR TCA 90 bp | CTCCCTTTAGAATATTCTGTAGATGACCTTCAGGCTTCTACTAGCAACCCCCGACTTTTCCACAGTGTCTaGAACCCCTTCAGCTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LPLEYSVDDLQASTSNPRLFHSV*NPFSSR Trigger: TCGAGAGCTGAAGGGGTTTCAGACACTGTGGAAAAG...TCGGGGGTTGCTAGTAGAAGCCTGAAGGTCATCTACAGAATATTCTAAAGGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR TCA 90 bp | TCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACACACCTCGGATGTTGCTACTaGCGGTGCCTTCCGAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SESEVLEETPNPLKTLTHLGCCY*RCLPSL Trigger: CAAGCTCGGAAGGCACCGTCAGTAGCAACATCCGAG...GTGTGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR TCA 90 bp | AAATTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAAAGCCAGCTTCCTCCTaGCCGAGGCGGCAGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KLSESEVLEETPNPLKTLKPASS*PRRQAL Trigger: CAGAGCCTGCCGCCTCGGTCAGGAGGAAGCTGGCTT...TAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | GAATATTCTGTAGATGACCTTCAGGCTTCTACTAGCAACCCCCGAGACCTGACACACAGGAAGTTTCTCTaGTATTCACTCAGCCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EYSVDDLQASTSNPRDLTHRKFL*YSLSPL Trigger: CAAGGGGCTGAGTGAATACCAGAGAAACTTCCTGTG...TGTCAGGTCTCGGGGGTTGCTAGTAGAAGCCTGAAGGTCATCTACAGAATATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | GCCAGCTTTTCAAAGTCCAATCATCTTAACACTGCACCTGTGTATACAGAAGGCTTGCTCAGCCTCTTGTaGCTTTGGCGTTCCAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ASFSKSNHLNTAPVYTEGLLSLL*LWRSKG Trigger: GCCTTTGGAACGCCAAAGCCACAAGAGGCTGAGCAA...GCCTTCTGTATACACAGGTGCAGTGTTAAGATGATTGGACTTTGAAAAGCTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | GCCAGCTTTTCAAAGTCCAATCATCTTAACACTGCACCTGTGTATACAGAAGGCTCAGTCTGTCTGCCTTaGGTGTCTGTGTGTCCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ASFSKSNHLNTAPVYTEGSVCLP*VSVCPV Trigger: AACCGGACACACAGACACCCAAGGCAGACAGACTGA...GCCTTCTGTATACACAGGTGCAGTGTTAAGATGATTGGACTTTGAAAAGCTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | AAATTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAGTAAGGCGGGGCACATaGAGGCAGCTGCCCAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KLSESEVLEETPNPLKTLVRRGT*RQLPRG Trigger: ACCCCTGGGCAGCTGCCTCCATGTGCCCCGCCTTAC...TAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | CTTAACACTGCACCTGTGTATACAGAAGGCGCTAATAAAACAGTGAGATTCTTTGGAAAGCCCGGAGGCTaGAAACTGCAGAGCGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LNTAPVYTEGANKTVRFFGKPGG*KLQSEQ Trigger: CTGCTCGCTCTGCAGTTTCCAGCCTCCGGGCTTTCC...AAAGAATCTCACTGTTTTATTAGCGCCTTCTGTATACACAGGTGCAGTGTTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR TCA 90 bp | CTTGCTGGTACAATAGGAAAGTCAAACAAGGATAGGCACAGGTCAGTTGAGCTCGAGAGAACTGCTTCTTaGTTGGCATCTTCTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LAGTIGKSNKDRHRSVELERTAS*LASSPC Trigger: GCAAGGAGAAGATGCCAATCAAGAAGCAGTTCTCTC...GAGCTCAACTGACCTGTGCCTATCCTTGTTTGACTTTCCTATTGTACCAGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
||
| CDS-3UTR TCA 90 bp | TCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACACACTTCCGAGCTTGTGACTaGGGAGACGTCCCAACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SESEVLEETPNPLKTLTHFRACD*GDVPTA Trigger: TGCTGTTGGGACGTCTCCTCAGTCACAAGCTCGGAA...GTGTGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR TCA 90 bp | GAAAAATATGTACAGCCAGCTTTTCAAAGTCCAATCATCTTAACACTGCACCTGCTCGGATGTTGCTACTaGCGGTGCCTTCCGAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EKYVQPAFQSPIILTLHLLGCCY*RCLPSL Trigger: CAAGCTCGGAAGGCACCGTCAGTAGCAACATCCGAG...CAGGTGCAGTGTTAAGATGATTGGACTTTGAAAAGCTGGCTGTACATATTTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR GCA 90 bp | TCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACACACTCTACCGCACAGGTCTaGTTGTCCTGTCCTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SESEVLEETPNPLKTLTHSTAQV*LSCPLS Trigger: GGAGAGAGGACAGGACAAGCAGACCTGTGCGGTAGA...GTGTGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR GCA 90 bp | CTTAACACTGCACCTGTGTATACAGAAGGCGCTAATAAAACAGTGAGATTCTTTCCGGAGGCTGGAAACTaGAGAGCGAGCAGAGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: LNTAPVYTEGANKTVRFFPEAGN*RASRDL Trigger: GAGATCTCTGCTCGCTCTGCAGTTTCCAGCCTCCGG...AAAGAATCTCACTGTTTTATTAGCGCCTTCTGTATACACAGGTGCAGTGTTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
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| CDS-3UTR CCA 90 bp | CTTAACACTGCACCTGTGTATACAGAAGGCGCTAATAAAACAGTGAGATTCTTTAGCCTCTTGTGGCTTTaGCGTTCCAAAGGCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LNTAPVYTEGANKTVRFFSLLWL*RSKGLG Trigger: CCCCAGGCCTTTGGAACGCCAAAGCCACAAGAGGCT...AAAGAATCTCACTGTTTTATTAGCGCCTTCTGTATACACAGGTGCAGTGTTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | CTCTCTTCTTTTTGCCTCCTGACAGCTGAGATTGTTTGCTTTCTTGCTGGTACACTTCTCGTGACACCCTaGTGCTTTTCCACAGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSSFCLLTAEIVCFLAGTLLVTP*CFSTVS Trigger: AGACACTGTGGAAAAGCACCAGGGTGTCACGAGAAG...TGTACCAGCAAGAAAGCAAACAATCTCAGCTGTCAGGAGGCAAAAAGAAGAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
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| CDS-3UTR CCA 90 bp | CTCCCTTTAGAATATTCTGTAGATGACCTTCAGGCTTCTACTAGCAACCCCCGATCAAGGCATTATTCGTaGGAACAACGGCCAATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPLEYSVDDLQASTSNPRSRHYS*EQRPIQ Trigger: CTGGATTGGCCGTTGTTCCCACGAATAATGCCTTGA...TCGGGGGTTGCTAGTAGAAGCCTGAAGGTCATCTACAGAATATTCTAAAGGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
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| CDS-3UTR CCA 90 bp | AAATTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAGCCCTGGGCTCCTCCTaGGTGTCTTCCTTCGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KLSESEVLEETPNPLKTLALGSS*VSSFVL Trigger: GAGCACGAAGGAAGACACCCAGGAGGAGCCCAGGGC...TAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | GAATATTCTGTAGATGACCTTCAGGCTTCTACTAGCAACCCCCGAGACCTGACAGCAAATTGTTCGTCCTaGGTTTTCCCATGTTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EYSVDDLQASTSNPRDLTANCSS*VFPCCA Trigger: AGCACAACATGGGAAAACCCAGGACGAACAATTTGC...TGTCAGGTCTCGGGGGTTGCTAGTAGAAGCCTGAAGGTCATCTACAGAATATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020437.13 |
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| CDS-3UTR CCA 90 bp | TTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACAGGAAAGCCCGGAGGCTaGAAACTGCAGAGCGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSESEVLEETPNPLKTLTGKPGG*KLQSEQ Trigger: CTGCTCGCTCTGCAGTTTCCAGCCTCCGGGCTTTCC...TGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR TCA 90 bp | CTCCCTTTAGAATATTCTGTAGATGACCTTCAGGCTTCTACTAGCAACCCCCGACCACTCCAGGTATTTTaGAATCTGAGGGTCATGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LPLEYSVDDLQASTSNPRPLQVF*NLRVMV Trigger: TACCATGACCCTCAGATTTCAAAATACCTGGAGTGG...TCGGGGGTTGCTAGTAGAAGCCTGAAGGTCATCTACAGAATATTCTAAAGGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR TCA 90 bp | GAAAAATATGTACAGCCAGCTTTTCAAAGTCCAATCATCTTAACACTGCACCTGCCTGCCTCCCTTCCCTaGGGAAACAGAAGATGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: EKYVQPAFQSPIILTLHLPASLP*GNRRCL Trigger: GAGACATCTTCTGTTTCCTCAGGGAAGGGAGGCAGG...CAGGTGCAGTGTTAAGATGATTGGACTTTGAAAAGCTGGCTGTACATATTTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR TCA 90 bp | CTTAACACTGCACCTGTGTATACAGAAGGCGCTAATAAAACAGTGAGATTCTTTCCTGCCTCCCTTCCCTaGGGAAACAGAAGATGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LNTAPVYTEGANKTVRFFPASLP*GNRRCL Trigger: GAGACATCTTCTGTTTCCTCAGGGAAGGGAGGCAGG...AAAGAATCTCACTGTTTTATTAGCGCCTTCTGTATACACAGGTGCAGTGTTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR TCA 90 bp | CTCCCTTTAGAATATTCTGTAGATGACCTTCAGGCTTCTACTAGCAACCCCCGAGAGTATCAGCAAATCTaGGCACATTGGCTTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPLEYSVDDLQASTSNPREYQQI*AHWLHS Trigger: ACTGTGAAGCCAATGTGCTCAGATTTGCTGATACTC...TCGGGGGTTGCTAGTAGAAGCCTGAAGGTCATCTACAGAATATTCTAAAGGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR GCA 90 bp | GAAAAATATGTACAGCCAGCTTTTCAAAGTCCAATCATCTTAACACTGCACCTGGGGTGTCTTCCTTCGTaGTCTCCTCAGCATCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: EKYVQPAFQSPIILTLHLGCLPS*SPQHPK Trigger: CTTGGGATGCTGAGGAGAGCACGAAGGAAGACACCC...CAGGTGCAGTGTTAAGATGATTGGACTTTGAAAAGCTGGCTGTACATATTTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR GCA 90 bp | AAGTCCAATCATCTTAACACTGCACCTGTGTATACAGAAGGCGCTAATAAAACAGGGTGTCTTCCTTCGTaGTCTCCTCAGCATCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: KSNHLNTAPVYTEGANKTGCLPS*SPQHPK Trigger: CTTGGGATGCTGAGGAGAGCACGAAGGAAGACACCC...TGTTTTATTAGCGCCTTCTGTATACACAGGTGCAGTGTTAAGATGATTGGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR GCA 90 bp | GAATATTCTGTAGATGACCTTCAGGCTTCTACTAGCAACCCCCGAGACCTGACACTCAGACAGTCTATCTaGATTGTTGTGCTGAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: EYSVDDLQASTSNPRDLTLRQSI*IVVLKL Trigger: GAGTTTCAGCACAACAATGCAGATAGACTGTCTGAG...TGTCAGGTCTCGGGGGTTGCTAGTAGAAGCCTGAAGGTCATCTACAGAATATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | AAATTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAGGCGTTCCAAAGGCCTaGGGTTCTGGTGGGACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KLSESEVLEETPNPLKTLGVPKA*GSGGTS Trigger: GCTTGTCCCACCAGAACCCCAGGCCTTTGGAACGCC...TAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | TCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACACACTCTCCAGTCTCCTGGTaGAGTTTTTCAGGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SESEVLEETPNPLKTLTHSPVSW*SFSGAA Trigger: AGCAGCCCCTGAAAAACTCCACCAGGAGACTGGAGA...GTGTGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | TCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACACACCTGCTCGAGGCCTGGTaGCTTCACTTTAGATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SESEVLEETPNPLKTLTHLLEAW*LHFRWR Trigger: TCTCCATCTAAAGTGAAGCCACCAGGCCTCGAGCAG...GTGTGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | AAATTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAGGAAAGCCCGGAGGCTaGAAACTGCAGAGCGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KLSESEVLEETPNPLKTLGKPGG*KLQSEQ Trigger: CTGCTCGCTCTGCAGTTTCCAGCCTCCGGGCTTTCC...TAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| 3UTR CAA 72 bp | TCAAGAGTGTGTGAAGAAATACACAACCCCGCACCTTaGTACTCAGACAAGTGCAAAGGTGCTCTCAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SRVCEEIHNPAP*YSDKCKGALKE Trigger: CTCTTTGAGAGCACCTTTGCACTTGTCTGAGTACAAAGGTGCGGGGTTGTGTATTTCTTCACACACTCTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR TCA 90 bp | TTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACATTCCGAGCTTGTGACTaGGGAGACGTCCCAACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSESEVLEETPNPLKTLTFRACD*GDVPTA Trigger: TGCTGTTGGGACGTCTCCTCAGTCACAAGCTCGGAA...TGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR TCA 90 bp | TCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACACACTTCTCCTTTCTTTTCTaGGCTCGGGCTAGAGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SESEVLEETPNPLKTLTHFSFLF*ARARVW Trigger: CCAGACTCTAGCCCGAGCTCAGAAAAGAAAGGAGAA...GTGTGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR GCA 90 bp | GAAAAATATGTACAGCCAGCTTTTCAAAGTCCAATCATCTTAACACTGCACCTGGGGAGAGAGGTTGTTTaGTGGAAGGTCTCAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EKYVQPAFQSPIILTLHLGREVV*WKVSAP Trigger: TGGAGCTGAGACCTTCCAGCAAACAACCTCTCTCCC...CAGGTGCAGTGTTAAGATGATTGGACTTTGAAAAGCTGGCTGTACATATTTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR GCA 90 bp | AAATTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTACCGGAGGCTGGAAACTaGAGAGCGAGCAGAGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: KLSESEVLEETPNPLKTLPEAGN*RASRDL Trigger: GAGATCTCTGCTCGCTCTGCAGTTTCCAGCCTCCGG...TAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | AAATTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAAGCCTCTTGTGGCTTTaGCGTTCCAAAGGCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KLSESEVLEETPNPLKTLSLLWL*RSKGLG Trigger: CCCCAGGCCTTTGGAACGCCAAAGCCACAAGAGGCT...TAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | GAAAAATATGTACAGCCAGCTTTTCAAAGTCCAATCATCTTAACACTGCACCTGTTGCTCAGCCTCTTGTaGCTTTGGCGTTCCAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EKYVQPAFQSPIILTLHLLLSLL*LWRSKG Trigger: GCCTTTGGAACGCCAAAGCCACAAGAGGCTGAGCAA...CAGGTGCAGTGTTAAGATGATTGGACTTTGAAAAGCTGGCTGTACATATTTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | TCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACACACCTTCTCGTGACACCCTaGTGCTTTTCCACAGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SESEVLEETPNPLKTLTHLLVTP*CFSTVS Trigger: AGACACTGTGGAAAAGCACCAGGGTGTCACGAGAAG...GTGTGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | GCCAGCTTTTCAAAGTCCAATCATCTTAACACTGCACCTGTGTATACAGAAGGCATCTGCCTTCTTTACTaGAGTCAGCATCTCCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: ASFSKSNHLNTAPVYTEGICLLY*SQHLQT Trigger: AGTCTGGAGATGCTGACTCCAGTAAAGAAGGCAGAT...GCCTTCTGTATACACAGGTGCAGTGTTAAGATGATTGGACTTTGAAAAGCTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | GAAAAATATGTACAGCCAGCTTTTCAAAGTCCAATCATCTTAACACTGCACCTGGTAGGAGGGTGTTTCTaGGGGGTCCTGTGGTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: EKYVQPAFQSPIILTLHLVGGCF*GVLWFV Trigger: TACAAACCACAGGACCCCCCAGAAACACCCTCCTAC...CAGGTGCAGTGTTAAGATGATTGGACTTTGAAAAGCTGGCTGTACATATTTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | CTTAACACTGCACCTGTGTATACAGAAGGCGCTAATAAAACAGTGAGATTCTTTTCTCCAGTCTCCTGGTaGAGTTTTTCAGGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LNTAPVYTEGANKTVRFFSPVSW*SFSGAA Trigger: AGCAGCCCCTGAAAAACTCCACCAGGAGACTGGAGA...AAAGAATCTCACTGTTTTATTAGCGCCTTCTGTATACACAGGTGCAGTGTTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | AAATTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTATGCGCCACCAACAGCTaGCGTCGTGAGATCATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KLSESEVLEETPNPLKTLCATNS*RREIMV Trigger: CACCATGATCTCACGACGCCAGCTGTTGGTGGCGCA...TAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR TCA 90 bp | TCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACACACGAGAGAACTGCTTCTTaGTTGGCATCTTCTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SESEVLEETPNPLKTLTHERTAS*LASSPC Trigger: GCAAGGAGAAGATGCCAATCAAGAAGCAGTTCTCTC...GTGTGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR TCA 90 bp | GAAAAATATGTACAGCCAGCTTTTCAAAGTCCAATCATCTTAACACTGCACCTGCTTTTCCACAGTGTCTaGAACCCCTTCAGCTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: EKYVQPAFQSPIILTLHLLFHSV*NPFSSR Trigger: TCGAGAGCTGAAGGGGTTTCAGACACTGTGGAAAAG...CAGGTGCAGTGTTAAGATGATTGGACTTTGAAAAGCTGGCTGTACATATTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR TCA 90 bp | TCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACACACCCTTTGGTGTCTCCATaGAGCAGGCTTCTTTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SESEVLEETPNPLKTLTHPLVSP*SRLLYR Trigger: TCTGTAAAGAAGCCTGCTTCATGGAGACACCAAAGG...GTGTGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR TCA 90 bp | AAATTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTACCTGCCTCCCTTCCCTaGGGAAACAGAAGATGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KLSESEVLEETPNPLKTLPASLP*GNRRCL Trigger: GAGACATCTTCTGTTTCCTCAGGGAAGGGAGGCAGG...TAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR GCA 90 bp | CTTAACACTGCACCTGTGTATACAGAAGGCGCTAATAAAACAGTGAGATTCTTTCTCGTGACACCCTGGTaGTTTTCCACAGTGTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LNTAPVYTEGANKTVRFFLVTPW*FSTVSE Trigger: TTCAGACACTGTGGAAAAGCACCAGGGTGTCACGAG...AAAGAATCTCACTGTTTTATTAGCGCCTTCTGTATACACAGGTGCAGTGTTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR GCA 90 bp | TTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACAGGGAGAGAGGTTGTTTaGTGGAAGGTCTCAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSESEVLEETPNPLKTLTGREVV*WKVSAP Trigger: TGGAGCTGAGACCTTCCAGCAAACAACCTCTCTCCC...TGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR GCA 90 bp | CTTAACACTGCACCTGTGTATACAGAAGGCGCTAATAAAACAGTGAGATTCTTTTCCAGCAAGATCCAGTaGTCGGATGTTGCTACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LNTAPVYTEGANKTVRFFSSKIQ*SDVATD Trigger: GTCAGTAGCAACATCCGAGCACTGGATCTTGCTGGA...AAAGAATCTCACTGTTTTATTAGCGCCTTCTGTATACACAGGTGCAGTGTTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR GCA 90 bp | AAATTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAGGGTGTCTTCCTTCGTaGTCTCCTCAGCATCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: KLSESEVLEETPNPLKTLGCLPS*SPQHPK Trigger: CTTGGGATGCTGAGGAGAGCACGAAGGAAGACACCC...TAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR GCA 90 bp | AAATTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTATCTACCGCACAGGTCTaGTTGTCCTGTCCTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KLSESEVLEETPNPLKTLSTAQV*LSCPLS Trigger: GGAGAGAGGACAGGACAAGCAGACCTGTGCGGTAGA...TAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR GCA 90 bp | TCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACACACTCGTGTGGATGTAGCTaGAAATTGTTCGTCCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SESEVLEETPNPLKTLTHSCGCS*KLFVLG Trigger: ACCCAGGACGAACAATTTGCAGCTACATCCACACGA...GTGTGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 |
||
| CDS-3UTR CCA 90 bp | TTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACATTGCTCAGCCTCTTGTaGCTTTGGCGTTCCAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSESEVLEETPNPLKTLTLLSLL*LWRSKG Trigger: GCCTTTGGAACGCCAAAGCCACAAGAGGCTGAGCAA...TGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | GAAAAATATGTACAGCCAGCTTTTCAAAGTCCAATCATCTTAACACTGCACCTGTTCTCTTGGGAACCCTaGAGGCCTCTAGTGAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: EKYVQPAFQSPIILTLHLFSWEP*RPLVRE Trigger: TTCTCTCACTAGAGGCCTCCAGGGTTCCCAAGAGAA...CAGGTGCAGTGTTAAGATGATTGGACTTTGAAAAGCTGGCTGTACATATTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | GAAAAATATGTACAGCCAGCTTTTCAAAGTCCAATCATCTTAACACTGCACCTGGATGCCTATCCAACCTaGGATCTATGCTCTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EKYVQPAFQSPIILTLHLDAYPT*DLCSGR Trigger: TCTCCCAGAGCATAGATCCCAGGTTGGATAGGCATC...CAGGTGCAGTGTTAAGATGATTGGACTTTGAAAAGCTGGCTGTACATATTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | TCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACACACCTGTCCGACATAATCTaGTTCAGATGGTCCCGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SESEVLEETPNPLKTLTHLSDII*FRWSRE Trigger: TTCTCGGGACCATCTGAACCAGATTATGTCGGACAG...GTGTGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | TTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACAGTAGGAGGGTGTTTCTaGGGGGTCCTGTGGTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSESEVLEETPNPLKTLTVGGCF*GVLWFV Trigger: TACAAACCACAGGACCCCCCAGAAACACCCTCCTAC...TGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | TTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACATCAGTCTGTCTGCCTTaGGTGTCTGTGTGTCCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSESEVLEETPNPLKTLTSVCLP*VSVCPV Trigger: AACCGGACACACAGACACCCAAGGCAGACAGACTGA...TGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR TCA 90 bp | AAGTCCAATCATCTTAACACTGCACCTGTGTATACAGAAGGCGCTAATAAAACAGAGAGAACTGCTTCTTaGTTGGCATCTTCTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KSNHLNTAPVYTEGANKTERTAS*LASSPC Trigger: GCAAGGAGAAGATGCCAATCAAGAAGCAGTTCTCTC...TGTTTTATTAGCGCCTTCTGTATACACAGGTGCAGTGTTAAGATGATTGGACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR TCA 90 bp | TTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACACTTTTCCACAGTGTCTaGAACCCCTTCAGCTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LSESEVLEETPNPLKTLTLFHSV*NPFSSR Trigger: TCGAGAGCTGAAGGGGTTTCAGACACTGTGGAAAAG...TGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR TCA 90 bp | TCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACACACATTCAGTCTCGTGGGTaGATGTATTGCCTTGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: SESEVLEETPNPLKTLTHIQSRG*MYCLGT Trigger: AGTTCCAAGGCAATACATTCACCCACGAGACTGAAT...GTGTGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR TCA 90 bp | TCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACACACGAGTATCAGCAAATCTaGGCACATTGGCTTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: SESEVLEETPNPLKTLTHEYQQI*AHWLHS Trigger: ACTGTGAAGCCAATGTGCTCAGATTTGCTGATACTC...GTGTGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR TCA 90 bp | TTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACATTTCCCATGTTGTGCTaGAACTCAGGGTCTCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSESEVLEETPNPLKTLTFPMLC*NSGSRR Trigger: TCTGCGAGACCCTGAGTTTCAGCACAACATGGGAAA...TGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 |
||
| CDS-3UTR TCA 90 bp | TTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACATTCTCCTTTCTTTTCTaGGCTCGGGCTAGAGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSESEVLEETPNPLKTLTFSFLF*ARARVW Trigger: CCAGACTCTAGCCCGAGCTCAGAAAAGAAAGGAGAA...TGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR GCA 90 bp | TTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACACTCGTGACACCCTGGTaGTTTTCCACAGTGTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSESEVLEETPNPLKTLTLVTPW*FSTVSE Trigger: TTCAGACACTGTGGAAAAGCACCAGGGTGTCACGAG...TGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR GCA 90 bp | GCCAGCTTTTCAAAGTCCAATCATCTTAACACTGCACCTGTGTATACAGAAGGCTGGGCTCAGGAACTTTaGTCTATATTCAGAATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ASFSKSNHLNTAPVYTEGWAQEL*SIFRIH Trigger: GTGAATTCTGAATATAGAGCAAAGTTCCTGAGCCCA...GCCTTCTGTATACACAGGTGCAGTGTTAAGATGATTGGACTTTGAAAAGCTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR GCA 90 bp | TTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACATCCAGCAAGATCCAGTaGTCGGATGTTGCTACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LSESEVLEETPNPLKTLTSSKIQ*SDVATD Trigger: GTCAGTAGCAACATCCGAGCACTGGATCTTGCTGGA...TGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | TTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACACTTCTCGTGACACCCTaGTGCTTTTCCACAGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSESEVLEETPNPLKTLTLLVTP*CFSTVS Trigger: AGACACTGTGGAAAAGCACCAGGGTGTCACGAGAAG...TGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | TTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACAGATGCCTATCCAACCTaGGATCTATGCTCTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSESEVLEETPNPLKTLTDAYPT*DLCSGR Trigger: TCTCCCAGAGCATAGATCCCAGGTTGGATAGGCATC...TGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | CTTAACACTGCACCTGTGTATACAGAAGGCGCTAATAAAACAGTGAGATTCTTTTCAAGGCATTATTCGTaGGAACAACGGCCAATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LNTAPVYTEGANKTVRFFSRHYS*EQRPIQ Trigger: CTGGATTGGCCGTTGTTCCCACGAATAATGCCTTGA...AAAGAATCTCACTGTTTTATTAGCGCCTTCTGTATACACAGGTGCAGTGTTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | TCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACACACATCTGCCTTCTTTACTaGAGTCAGCATCTCCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: SESEVLEETPNPLKTLTHICLLY*SQHLQT Trigger: AGTCTGGAGATGCTGACTCCAGTAAAGAAGGCAGAT...GTGTGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | AAGTCCAATCATCTTAACACTGCACCTGTGTATACAGAAGGCGCTAATAAAACAACTTTTCCAAGCCTTTaGTGTCTCCATGAAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KSNHLNTAPVYTEGANKTTFPSL*CLHEAG Trigger: GCCTGCTTCATGGAGACACCAAAGGCTTGGAAAAGT...TGTTTTATTAGCGCCTTCTGTATACACAGGTGCAGTGTTAAGATGATTGGACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | AAGTCCAATCATCTTAACACTGCACCTGTGTATACAGAAGGCGCTAATAAAACACTGTCCGACATAATCTaGTTCAGATGGTCCCGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KSNHLNTAPVYTEGANKTLSDII*FRWSRE Trigger: TTCTCGGGACCATCTGAACCAGATTATGTCGGACAG...TGTTTTATTAGCGCCTTCTGTATACACAGGTGCAGTGTTAAGATGATTGGACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | AAATTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAGTAGGAGGGTGTTTCTaGGGGGTCCTGTGGTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: KLSESEVLEETPNPLKTLVGGCF*GVLWFV Trigger: TACAAACCACAGGACCCCCCAGAAACACCCTCCTAC...TAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | AAATTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAGCATCTCCAGTCTCCTaGTGGAGTTTTTCAGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KLSESEVLEETPNPLKTLASPVS*WSFSGA Trigger: AGCCCCTGAAAAACTCCACCAGGAGACTGGAGATGC...TAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR TCA 90 bp | TTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACACCTTTGGTGTCTCCATaGAGCAGGCTTCTTTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSESEVLEETPNPLKTLTPLVSP*SRLLYR Trigger: TCTGTAAAGAAGCCTGCTTCATGGAGACACCAAAGG...TGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR GCA 90 bp | AAATTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTATCCAGCAAGATCCAGTaGTCGGATGTTGCTACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: KLSESEVLEETPNPLKTLSSKIQ*SDVATD Trigger: GTCAGTAGCAACATCCGAGCACTGGATCTTGCTGGA...TAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | TTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACACACAGGAAGTTTCTCTaGTATTCACTCAGCCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSESEVLEETPNPLKTLTHRKFL*YSLSPL Trigger: CAAGGGGCTGAGTGAATACCAGAGAAACTTCCTGTG...TGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | CTTAACACTGCACCTGTGTATACAGAAGGCGCTAATAAAACAGTGAGATTCTTTGAACTGCTTCTTGATTaGCATCTTCTCCTTGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LNTAPVYTEGANKTVRFFELLLD*HLLLAQ Trigger: CTGAGCAAGGAGAAGATGCCAATCAAGAAGCAGTTC...AAAGAATCTCACTGTTTTATTAGCGCCTTCTGTATACACAGGTGCAGTGTTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | AAATTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTATTCTCTTGGGAACCCTaGAGGCCTCTAGTGAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KLSESEVLEETPNPLKTLFSWEP*RPLVRE Trigger: TTCTCTCACTAGAGGCCTCCAGGGTTCCCAAGAGAA...TAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | GCCAGCTTTTCAAAGTCCAATCATCTTAACACTGCACCTGTGTATACAGAAGGCGTGAATGTATTGCCTTaGAACTGTGGAATAATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASFSKSNHLNTAPVYTEGVNVLP*NCGIIW Trigger: CCAAATTATTCCACAGTTCCAAGGCAATACATTCAC...GCCTTCTGTATACACAGGTGCAGTGTTAAGATGATTGGACTTTGAAAAGCTGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | TTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACAACTTTTCCAAGCCTTTaGTGTCTCCATGAAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSESEVLEETPNPLKTLTTFPSL*CLHEAG Trigger: GCCTGCTTCATGGAGACACCAAAGGCTTGGAAAAGT...TGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR TCA 90 bp | AAATTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAGAGAGAACTGCTTCTTaGTTGGCATCTTCTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KLSESEVLEETPNPLKTLERTAS*LASSPC Trigger: GCAAGGAGAAGATGCCAATCAAGAAGCAGTTCTCTC...TAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR TCA 90 bp | TCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACACACTTTCAAATACTCTCTTaGCTTTGGTTCCTTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SESEVLEETPNPLKTLTHFQILS*LWFLHW Trigger: CCAGTGAAGGAACCAAAGTCAAGAGAGTATTTGAAA...GTGTGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR TCA 90 bp | AAATTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTACCTTTGGTGTCTCCATaGAGCAGGCTTCTTTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: KLSESEVLEETPNPLKTLPLVSP*SRLLYR Trigger: TCTGTAAAGAAGCCTGCTTCATGGAGACACCAAAGG...TAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR GCA 90 bp | TCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACACACTGGGCTCAGGAACTTTaGTCTATATTCAGAATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SESEVLEETPNPLKTLTHWAQEL*SIFRIH Trigger: GTGAATTCTGAATATAGAGCAAAGTTCCTGAGCCCA...GTGTGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR GCA 90 bp | AAATTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTATCGTGTGGATGTAGCTaGAAATTGTTCGTCCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KLSESEVLEETPNPLKTLSCGCS*KLFVLG Trigger: ACCCAGGACGAACAATTTGCAGCTACATCCACACGA...TAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 |
||
| CDS-3UTR GCA 90 bp | TCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACACACCTCAGACAGTCTATCTaGATCTTCATCATTAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SESEVLEETPNPLKTLTHLRQSI*IFIIKG Trigger: GCCTTTAATGATGAAGATGCAGATAGACTGTCTGAG...GTGTGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 |
||
| CDS-3UTR CCA 90 bp | TTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACAGAACTGCTTCTTGATTaGCATCTTCTCCTTGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSESEVLEETPNPLKTLTELLLD*HLLLAQ Trigger: CTGAGCAAGGAGAAGATGCCAATCAAGAAGCAGTTC...TGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | AAATTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTATCAAGGCATTATTCGTaGGAACAACGGCCAATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KLSESEVLEETPNPLKTLSRHYS*EQRPIQ Trigger: CTGGATTGGCCGTTGTTCCCACGAATAATGCCTTGA...TAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | AAATTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACTTTTCCAAGCCTTTaGTGTCTCCATGAAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KLSESEVLEETPNPLKTLTFPSL*CLHEAG Trigger: GCCTGCTTCATGGAGACACCAAAGGCTTGGAAAAGT...TAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | TTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACAGCAAATTGTTCGTCCTaGGTTTTCCCATGTTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSESEVLEETPNPLKTLTANCSS*VFPCCA Trigger: AGCACAACATGGGAAAACCCAGGACGAACAATTTGC...TGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 |
||
| CDS-3UTR CCA 90 bp | AAATTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTACCTCTGCATACCACATaGCATTTAGAGAACCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KLSESEVLEETPNPLKTLPLHTT*HLENPG Trigger: ACCAGGGTTCTCTAAATGCCATGTGGTATGCAGAGG...TAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163238.9 |
||
| CDS-3UTR TCA 90 bp | AAATTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAATTCAGTCTCGTGGGTaGATGTATTGCCTTGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: KLSESEVLEETPNPLKTLIQSRG*MYCLGT Trigger: AGTTCCAAGGCAATACATTCACCCACGAGACTGAAT...TAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR TCA 90 bp | CTTAACACTGCACCTGTGTATACAGAAGGCGCTAATAAAACAGTGAGATTCTTTTTTCAAATACTCTCTTaGCTTTGGTTCCTTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LNTAPVYTEGANKTVRFFFQILS*LWFLHW Trigger: CCAGTGAAGGAACCAAAGTCAAGAGAGTATTTGAAA...AAAGAATCTCACTGTTTTATTAGCGCCTTCTGTATACACAGGTGCAGTGTTAAG 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR TCA 90 bp | AAATTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAGAGTATCAGCAAATCTaGGCACATTGGCTTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: KLSESEVLEETPNPLKTLEYQQI*AHWLHS Trigger: ACTGTGAAGCCAATGTGCTCAGATTTGCTGATACTC...TAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR GCA 90 bp | CTTAACACTGCACCTGTGTATACAGAAGGCGCTAATAAAACAGTGAGATTCTTTTCAGCATCTCCAGACTaGTGTTTCCTTTCAAATACT | + |
|
Preference number: 4 (lower is better) Translates to: LNTAPVYTEGANKTVRFFSASPD*CFLSNT Trigger: AGTATTTGAAAGGAAACAGCAGTCTGGAGATGCTGA...AAAGAATCTCACTGTTTTATTAGCGCCTTCTGTATACACAGGTGCAGTGTTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR GCA 90 bp | GAAAAATATGTACAGCCAGCTTTTCAAAGTCCAATCATCTTAACACTGCACCTGTGGGCTCAGGAACTTTaGTCTATATTCAGAATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: EKYVQPAFQSPIILTLHLWAQEL*SIFRIH Trigger: GTGAATTCTGAATATAGAGCAAAGTTCCTGAGCCCA...CAGGTGCAGTGTTAAGATGATTGGACTTTGAAAAGCTGGCTGTACATATTTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | AAATTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAGAACTGCTTCTTGATTaGCATCTTCTCCTTGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KLSESEVLEETPNPLKTLELLLD*HLLLAQ Trigger: CTGAGCAAGGAGAAGATGCCAATCAAGAAGCAGTTC...TAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | AAATTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAATCTGCCTTCTTTACTaGAGTCAGCATCTCCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: KLSESEVLEETPNPLKTLICLLY*SQHLQT Trigger: AGTCTGGAGATGCTGACTCCAGTAAAGAAGGCAGAT...TAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR TCA 90 bp | CTTAACACTGCACCTGTGTATACAGAAGGCGCTAATAAAACAGTGAGATTCTTTGGGATTATAAGACTCTaGCAAATAGGACTTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LNTAPVYTEGANKTVRFFGIIRL*QIGLFP Trigger: TGGAAAAAGTCCTATTTGTCAGAGTCTTATAATCCC...AAAGAATCTCACTGTTTTATTAGCGCCTTCTGTATACACAGGTGCAGTGTTAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR TCA 90 bp | GAAAAATATGTACAGCCAGCTTTTCAAAGTCCAATCATCTTAACACTGCACCTGGGGATTATAAGACTCTaGCAAATAGGACTTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EKYVQPAFQSPIILTLHLGIIRL*QIGLFP Trigger: TGGAAAAAGTCCTATTTGTCAGAGTCTTATAATCCC...CAGGTGCAGTGTTAAGATGATTGGACTTTGAAAAGCTGGCTGTACATATTTTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR TCA 90 bp | TTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACATTTCAAATACTCTCTTaGCTTTGGTTCCTTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSESEVLEETPNPLKTLTFQILS*LWFLHW Trigger: CCAGTGAAGGAACCAAAGTCAAGAGAGTATTTGAAA...TGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR GCA 90 bp | TTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACATCAGCATCTCCAGACTaGTGTTTCCTTTCAAATACT | + |
|
Preference number: 4 (lower is better) Translates to: LSESEVLEETPNPLKTLTSASPD*CFLSNT Trigger: AGTATTTGAAAGGAAACAGCAGTCTGGAGATGCTGA...TGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR CCA 90 bp | CTTAACACTGCACCTGTGTATACAGAAGGCGCTAATAAAACAGTGAGATTCTTTGTGAATGTATTGCCTTaGAACTGTGGAATAATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LNTAPVYTEGANKTVRFFVNVLP*NCGIIW Trigger: CCAAATTATTCCACAGTTCCAAGGCAATACATTCAC...AAAGAATCTCACTGTTTTATTAGCGCCTTCTGTATACACAGGTGCAGTGTTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR TCA 90 bp | TTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACAGGGATTATAAGACTCTaGCAAATAGGACTTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSESEVLEETPNPLKTLTGIIRL*QIGLFP Trigger: TGGAAAAAGTCCTATTTGTCAGAGTCTTATAATCCC...TGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR GCA 90 bp | AAATTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTACTCAGACAGTCTATCTaGATCTTCATCATTAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KLSESEVLEETPNPLKTLLRQSI*IFIIKG Trigger: GCCTTTAATGATGAAGATGCAGATAGACTGTCTGAG...TAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 |
||
| CDS-3UTR CCA 90 bp | AAATTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAGTGAATGTATTGCCTTaGAACTGTGGAATAATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KLSESEVLEETPNPLKTLVNVLP*NCGIIW Trigger: CCAAATTATTCCACAGTTCCAAGGCAATACATTCAC...TAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS GCA 90 bp | CCATGTTGTGCTGAAACTCAGGGTCTCGCAGACGGCCCTGGATCCTaGTGGACGGATGACAGTAAGGCGGGGCACATGGAGGCAGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PCCAETQGLADGPGS*WTDDSKAGHMEAAA Trigger: GGCAGCTGCCTCCATGTGCCCCGCCTTACTGTCATCCGTCCAGCAGGATCCAGGGCCGTCTGCGAGACCCTGAGTTTCAGCACAACATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000169817.3 |
||
| CDS CCA 90 bp | ACTGCGCCACCAACAGCTGGCGTCGTGAGATCATGGTGCGTCCGCTaGATACCGAGTTCTCTCAGCCTCGGTGTAGGAAGCCTGCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: TAPPTAGVVRSWCVR*IPSSLSLGVGSLPP Trigger: GGGAGGCAGGCTTCCTACACCGAGGCTGAGAGAACTCGGTATCCAGCGGACGCACCATGATCTCACGACGCCAGCTGTTGGTGGCGCAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
||
| CDS CCA 90 bp | TGTTGTGCTGAAACTCAGGGTCTCGCAGACGGCCCTGGATCCTGCTaGACGGATGACAGTAAGGCGGGGCACATGGAGGCAGCTGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CCAETQGLADGPGSC*TDDSKAGHMEAAAQ Trigger: CTGGGCAGCTGCCTCCATGTGCCCCGCCTTACTGTCATCCGTCCAGCAGGATCCAGGGCCGTCTGCGAGACCCTGAGTTTCAGCACAACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
||
| CDS GCA 90 bp | CATTGTTGTGCTGAAACTCAGGGTCTCGCAGACGGCCCTGGATCCTaGTGGACGGATGACAGTAAGGCGGGGCACATGGAGGCAGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: HCCAETQGLADGPGS*WTDDSKAGHMEAAA Trigger: GGCAGCTGCCTCCATGTGCCCCGCCTTACTGTCATCCGTCCAGCAGGATCCAGGGCCGTCTGCGAGACCCTGAGTTTCAGCACAACAATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164077.9 |
||
| CDS GCA 90 bp | GACACTAAGACTGCGCCACCAACAGCTGGCGTCGTGAGATCATGGTaGGTCCGCTGGATACCGAGTTCTCTCAGCCTCGGTGTAGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: DTKTAPPTAGVVRSW*VRWIPSSLSLGVGS Trigger: GCTTCCTACACCGAGGCTGAGAGAACTCGGTATCCAGCGGACGCACCATGATCTCACGACGCCAGCTGTTGGTGGCGCAGTCTTAGTGTC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
||
| CDS CCA 90 bp | GGAGACACTAAGACTGCGCCACCAACAGCTGGCGTCGTGAGATCATaGTGCGTCCGCTGGATACCGAGTTCTCTCAGCCTCGGTGTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GDTKTAPPTAGVVRS*CVRWIPSSLSLGVG Trigger: TCCTACACCGAGGCTGAGAGAACTCGGTATCCAGCGGACGCACCATGATCTCACGACGCCAGCTGTTGGTGGCGCAGTCTTAGTGTCTCC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
||
| CDS-3UTR CAA 90 bp | GAGAACGAACTGTGGGAGGCAGTGAGATGTCCCACACACGCCCCTGCCACCTCTGCTCTGGGAGAGAGGTaGTTTGCTGGAAGGTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: ENELWEAVRCPTHAPATSALGER*FAGRSQ Trigger: CTGAGACCTTCCAGCAAACAACCTCTCTCCCAGAGC...AGAGGTGGCAGGGGCGTGTGTGGGACATCTCACTGCCTCCCACAGTTCGTTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
||
| CDS GCA 90 bp | TCCACATCCGCGCTAACTGGCGCATGGCTTCTCGTGACACCCTGGTaGTTTTCCACAGTGTCTGAAACCCCTTCAGCTCTCGAGTCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: STSALTGAWLLVTPW*FSTVSETPSALESA Trigger: TGCGGACTCGAGAGCTGAAGGGGTTTCAGACACTGTGGAAAAGCACCAGGGTGTCACGAGAAGCCATGCGCCAGTTAGCGCGGATGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 ENSMUST00000219087.2 |
||
| CDS CCA 90 bp | AGCTCCACATCCGCGCTAACTGGCGCATGGCTTCTCGTGACACCCTaGTGCTTTTCCACAGTGTCTGAAACCCCTTCAGCTCTCGAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSTSALTGAWLLVTP*CFSTVSETPSALES Trigger: GGACTCGAGAGCTGAAGGGGTTTCAGACACTGTGGAAAAGCACCAGGGTGTCACGAGAAGCCATGCGCCAGTTAGCGCGGATGTGGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 ENSMUST00000219087.2 |
||
| CDS TCA 90 bp | GCAGAGCGAGCAGAGATCTCAGACAGTCTATCTGCATTGTTGTGCTaGAACTCAGGGTCTCGCAGACGGCCCTGGATCCTGCTGGACGGA | + |
|
Preference number: 5 (lower is better) Translates to: AERAEISDSLSALLC*NSGSRRRPWILLDG Trigger: TCCGTCCAGCAGGATCCAGGGCCGTCTGCGAGACCCTGAGTTTCAGCACAACAATGCAGATAGACTGTCTGAGATCTCTGCTCGCTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164077.9 |
||
| CDS CCA 90 bp | GAGAGGTTGTTTGCTGGAAGGTCTCAGCTCCACATCCGCGCTAACTaGCGCATGGCTTCTCGTGACACCCTGGTGCTTTTCCACAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ERLFAGRSQLHIRAN*RMASRDTLVLFHSV Trigger: GACACTGTGGAAAAGCACCAGGGTGTCACGAGAAGCCATGCGCCAGTTAGCGCGGATGTGGAGCTGAGACCTTCCAGCAAACAACCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 ENSMUST00000219087.2 |
||
| CDS TCA 90 bp | TGGCGCATGGCTTCTCGTGACACCCTGGTGCTTTTCCACAGTGTCTaGAACCCCTTCAGCTCTCGAGTCCGCAGAATGAGACCGAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: WRMASRDTLVLFHSV*NPFSSRVRRMRPSS Trigger: AGAACTCGGTCTCATTCTGCGGACTCGAGAGCTGAAGGGGTTTCAGACACTGTGGAAAAGCACCAGGGTGTCACGAGAAGCCATGCGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 ENSMUST00000219087.2 |
||
| CDS CCA 90 bp | TGTTTGCTGGAAGGTCTCAGCTCCACATCCGCGCTAACTGGCGCATaGCTTCTCGTGACACCCTGGTGCTTTTCCACAGTGTCTGAAACC | + |
|
Preference number: 5 (lower is better) Translates to: CLLEGLSSTSALTGA*LLVTPWCFSTVSET Trigger: GGTTTCAGACACTGTGGAAAAGCACCAGGGTGTCACGAGAAGCCATGCGCCAGTTAGCGCGGATGTGGAGCTGAGACCTTCCAGCAAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 ENSMUST00000219087.2 |
||
| CDS TCA 90 bp | CAGTGCTCGGATGTTGCTACTGACGGTGCCTTCCGAGCTTGTGACTaGGGAGACGTCCCAACAGCAGTTGCTGTCCGACATAATCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: QCSDVATDGAFRACD*GDVPTAVAVRHNLV Trigger: AACCAGATTATGTCGGACAGCAACTGCTGTTGGGACGTCTCCTCAGTCACAAGCTCGGAAGGCACCGTCAGTAGCAACATCCGAGCACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
||
| CDS GCA 90 bp | GAGGCTGGAAACTGCAGAGCGAGCAGAGATCTCAGACAGTCTATCTaGATTGTTGTGCTGAAACTCAGGGTCTCGCAGACGGCCCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: EAGNCRASRDLRQSI*IVVLKLRVSQTALD Trigger: ATCCAGGGCCGTCTGCGAGACCCTGAGTTTCAGCACAACAATGCAGATAGACTGTCTGAGATCTCTGCTCGCTCTGCAGTTTCCAGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164077.9 |
||
| CDS CCA 90 bp | AGGAAACAGAAGATGTCTCCGACCCTTCTGTCAGTCTGTCTGCCTTaGGTGTCTGTGTGTCCGGTTTCTCCAGCTCTACCGCACAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RKQKMSPTLLSVCLP*VSVCPVSPALPHRS Trigger: AGACCTGTGCGGTAGAGCTGGAGAAACCGGACACACAGACACCCAAGGCAGACAGACTGACAGAAGGGTCGGAGACATCTTCTGTTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
||
| CDS TCA 90 bp | TTTTCCACAGTGTCTGAAACCCCTTCAGCTCTCGAGTCCGCAGAATaGGACCGAGTTCTCTTGGGAACCCTGGAGGCCTCTAGTGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: FSTVSETPSALESAE*DRVLLGTLEASSER Trigger: TCTCTCACTAGAGGCCTCCAGGGTTCCCAAGAGAACTCGGTCTCATTCTGCGGACTCGAGAGCTGAAGGGGTTTCAGACACTGTGGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 ENSMUST00000219087.2 |
||
| CDS CCA 90 bp | CAGCTCTCGAGTCCGCAGAATGAGACCGAGTTCTCTTGGGAACCCTaGAGGCCTCTAGTGAGAGAACTGCTTCTTGATTGGCATCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: QLSSPQNETEFSWEP*RPLVRELLLDWHLL Trigger: GAGAAGATGCCAATCAAGAAGCAGTTCTCTCACTAGAGGCCTCCAGGGTTCCCAAGAGAACTCGGTCTCATTCTGCGGACTCGAGAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 ENSMUST00000219087.2 |
||
| CDS CCA 90 bp | AAACCCCTTCAGCTCTCGAGTCCGCAGAATGAGACCGAGTTCTCTTaGGAACCCTGGAGGCCTCTAGTGAGAGAACTGCTTCTTGATTGG | + |
|
Preference number: 5 (lower is better) Translates to: KPLQLSSPQNETEFS*EPWRPLVRELLLDW Trigger: CCAATCAAGAAGCAGTTCTCTCACTAGAGGCCTCCAGGGTTCCCAAGAGAACTCGGTCTCATTCTGCGGACTCGAGAGCTGAAGGGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 ENSMUST00000219087.2 |
||
| CDS CCA 90 bp | CCAGCTTTCTTACGAAGATGCCTATCCAACCTGGGATCTATGCTCTaGGAGAGAGGTTGTTTGCTGGAAGGTCTCAGCTCCACATCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: PAFLRRCLSNLGSML*ERGCLLEGLSSTSA Trigger: CGCGGATGTGGAGCTGAGACCTTCCAGCAAACAACCTCTCTCCCAGAGCATAGATCCCAGGTTGGATAGGCATCTTCGTAAGAAAGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS CCA 90 bp | CCTTTCTTTTCTGAGCTCGGGCTAGAGTCTGGAAAGCCCGGAGGCTaGAAACTGCAGAGCGAGCAGAGATCTCAGACAGTCTATCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: PFFSELGLESGKPGG*KLQSEQRSQTVYLH Trigger: ATGCAGATAGACTGTCTGAGATCTCTGCTCGCTCTGCAGTTTCCAGCCTCCGGGCTTTCCAGACTCTAGCCCGAGCTCAGAAAAGAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
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| CDS-3UTR CAA 90 bp | CTTCCATGGACCCCTGTATGCCCTGGCTTTCTCAACAAGTCACAGATTCTCCTCTGGGAGAGAGGTTGTTaGCTGGAAGGTCTCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LPWTPVCPGFLNKSQILLWERGC*LEGLSS Trigger: GGAGCTGAGACCTTCCAGCAAACAACCTCTCTCCCA...GAGGAGAATCTGTGACTTGTTGAGAAAGCCAGGGCATACAGGGGTCCATGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
||
| CDS TCA 90 bp | GTTCTCTTGGGAACCCTGGAGGCCTCTAGTGAGAGAACTGCTTCTTaGTTGGCATCTTCTCCTTGCTCAGCCTCTTGTGGCTTTGGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: VLLGTLEASSERTAS*LASSPCSASCGFGV Trigger: AACGCCAAAGCCACAAGAGGCTGAGCAAGGAGAAGATGCCAATCAAGAAGCAGTTCTCTCACTAGAGGCCTCCAGGGTTCCCAAGAGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 ENSMUST00000219087.2 |
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| CDS CCA 90 bp | CGGAGCTCCTTAACCTCTGCATACCACATGGCATTTAGAGAACCCTaGTTTGACAGGTTCTCCTTCACCCGGGTCCAAGCTCCAGCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: RSSLTSAYHMAFREP*FDRFSFTRVQAPAL Trigger: TAAAGCTGGAGCTTGGACCCGGGTGAAGGAGAACCTGTCAAACCAGGGTTCTCTAAATGCCATGTGGTATGCAGAGGTTAAGGAGCTCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163238.9 ENSMUST00000169817.3 |
||
| CDS CCA 90 bp | TTTAAAAGAAACACGGTGGCTCTTCCTACCCTGGGATCTATGCTCTaGGAGAGAGGTTGTTTGCTGGAAGGTCTCAGCTCCACATCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: FKRNTVALPTLGSML*ERGCLLEGLSSTSA Trigger: CGCGGATGTGGAGCTGAGACCTTCCAGCAAACAACCTCTCTCCCAGAGCATAGATCCCAGGGTAGGAAGAGCCACCGTGTTTCTTTTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
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| CDS-3UTR CAA 90 bp | CCCCCTTCCCTCTGCCCACCAATCTCACACATCACCTTCCATGGACCCCTGTATTCCACTCCAGGTATTTaGAAATCTGAGGGTCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: PPSLCPPISHITFHGPLYSTPGI*KSEGHG Trigger: ACCATGACCCTCAGATTTCAAAATACCTGGAGTGGA...ATACAGGGGTCCATGGAAGGTGATGTGTGAGATTGGTGGGCAGAGGGAAGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
||
| CDS GCA 90 bp | TTCTTCAGAGTTTCTAAGCCATCTTGGGAGGACGCTCTCCTCCTCTaGTCGAGGCCTGGTGGCTTCACTTTAGATGGAGACACTAAGACT | + |
|
Preference number: 5 (lower is better) Translates to: FFRVSKPSWEDALLL*SRPGGFTLDGDTKT Trigger: AGTCTTAGTGTCTCCATCTAAAGTGAAGCCACCAGGCCTCGAGCAGAGGAGGAGAGCGTCCTCCCAAGATGGCTTAGAAACTCTGAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
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| CDS TCA 90 bp | TTCCAAAGGCCTGGGGTTCTGGTGGGACAAGCGTATCCTTCTTTCTaGCGGTTCCGTTCCACTCCAGGTATTTTGAAATCTGAGGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: FQRPGVLVGQAYPSF*RFRSTPGILKSEGH Trigger: ATGACCCTCAGATTTCAAAATACCTGGAGTGGAACGGAACCGTCAGAAAGAAGGATACGCTTGTCCCACCAGAACCCCAGGCCTTTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 ENSMUST00000219087.2 |
||
| CDS GCA 90 bp | CCAATCCAGCTTTCTTACGAAGATGCCTATCCAACCTGGGATCTATaGTCTGGGAGAGAGGTTGTTTGCTGGAAGGTCTCAGCTCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: PIQLSYEDAYPTWDL*SGREVVCWKVSAPH Trigger: ATGTGGAGCTGAGACCTTCCAGCAAACAACCTCTCTCCCAGAGCATAGATCCCAGGTTGGATAGGCATCTTCGTAAGAAAGCTGGATTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
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| CDS CCA 90 bp | GAACAACGGCCAATCCAGCTTTCTTACGAAGATGCCTATCCAACCTaGGATCTATGCTCTGGGAGAGAGGTTGTTTGCTGGAAGGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: EQRPIQLSYEDAYPT*DLCSGREVVCWKVS Trigger: TGAGACCTTCCAGCAAACAACCTCTCTCCCAGAGCATAGATCCCAGGTTGGATAGGCATCTTCGTAAGAAAGCTGGATTGGCCGTTGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
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| CDS-3UTR CAA 90 bp | GCCAGCTTTTCAAAGTCCAATCATCTTAACACTGCACCTGTGTATACAGAAGGCGTCAGTCTGTCTGCCTaGGGTGTCTGTGTGTCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: ASFSKSNHLNTAPVYTEGVSLSA*GVCVSG Trigger: ACCGGACACACAGACACCCAAGGCAGACAGACTGAC...GCCTTCTGTATACACAGGTGCAGTGTTAAGATGATTGGACTTTGAAAAGCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
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| CDS GCA 90 bp | GCATTATTCGTGGGAACAACGGCCAATCCAGCTTTCTTACGAAGATaGCTATCCAACCTGGGATCTATGCTCTGGGAGAGAGGTTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ALFVGTTANPAFLRR*LSNLGSMLWERGCL Trigger: CAAACAACCTCTCTCCCAGAGCATAGATCCCAGGTTGGATAGGCATCTTCGTAAGAAAGCTGGATTGGCCGTTGTTCCCACGAATAATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
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| CDS GCA 90 bp | ATTCCTTTAAAAGAAACACGGTGGCTCTTCCTACCCTGGGATCTATaGTCTGGGAGAGAGGTTGTTTGCTGGAAGGTCTCAGCTCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: IPLKETRWLFLPWDL*SGREVVCWKVSAPH Trigger: ATGTGGAGCTGAGACCTTCCAGCAAACAACCTCTCTCCCAGAGCATAGATCCCAGGGTAGGAAGAGCCACCGTGTTTCTTTTAAAGGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
||
| CDS CCA 90 bp | TTTCCTTTCTTAGTAATGTCTTTCTTCAGAGTTTCTAAGCCATCTTaGGAGGACGCTCTCCTCCTCTGCTCGAGGCCTGGTGGCTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: FPFLVMSFFRVSKPS*EDALLLCSRPGGFT Trigger: AGTGAAGCCACCAGGCCTCGAGCAGAGGAGGAGAGCGTCCTCCCAAGATGGCTTAGAAACTCTGAAGAAAGACATTACTAAGAAAGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
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| CDS CCA 90 bp | GGAATAATTTGGCTTTTATTACGGAAAACCCTGGGATCTATGCTCTaGGAGAGAGGTTGTTTGCTGGAAGGTCTCAGCTCCACATCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: GIIWLLLRKTLGSML*ERGCLLEGLSSTSA Trigger: CGCGGATGTGGAGCTGAGACCTTCCAGCAAACAACCTCTCTCCCAGAGCATAGATCCCAGGGTTTTCCGTAATAAAAGCCAAATTATTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169817.3 |
||
| CDS-3UTR CAA 90 bp | GCCAGCTTTTCAAAGTCCAATCATCTTAACACTGCACCTGTGTATACAGAAGGCTGGGAGAGAGGTTGTTaGCTGGAAGGTCTCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ASFSKSNHLNTAPVYTEGWERGC*LEGLSS Trigger: GGAGCTGAGACCTTCCAGCAAACAACCTCTCTCCCA...GCCTTCTGTATACACAGGTGCAGTGTTAAGATGATTGGACTTTGAAAAGCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR CAA 90 bp | GCCAGCTTTTCAAAGTCCAATCATCTTAACACTGCACCTGTGTATACAGAAGGCGCTCTGGGAGAGAGGTaGTTTGCTGGAAGGTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: ASFSKSNHLNTAPVYTEGALGER*FAGRSQ Trigger: CTGAGACCTTCCAGCAAACAACCTCTCTCCCAGAGC...GCCTTCTGTATACACAGGTGCAGTGTTAAGATGATTGGACTTTGAAAAGCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR CAA 90 bp | CTCCCTTTAGAATATTCTGTAGATGACCTTCAGGCTTCTACTAGCAACCCCCGAACGTCCCAACAGCAGTaGCTGTCCGACATAATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LPLEYSVDDLQASTSNPRTSQQQ*LSDIIW Trigger: CCAGATTATGTCGGACAGCAACTGCTGTTGGGACGT...TCGGGGGTTGCTAGTAGAAGCCTGAAGGTCATCTACAGAATATTCTAAAGGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS CCA 90 bp | TTTCCAAGCCTTTGGTGTCTCCATGAAGCAGGCTTCTTTACAGACTaGTCTGAGTCTTCCGACGCCATGTCTACTTCTAAGTCTAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: FPSLWCLHEAGFFTD*SESSDAMSTSKSKG Trigger: GCCTTTAGACTTAGAAGTAGACATGGCGTCGGAAGACTCAGACCAGTCTGTAAAGAAGCCTGCTTCATGGAGACACCAAAGGCTTGGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
||
| CDS-3UTR CAA 90 bp | GAATATTCTGTAGATGACCTTCAGGCTTCTACTAGCAACCCCCGAGACCTGACACCCTTGAAATTTCGCTaGTATTCAGTCTCGTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: EYSVDDLQASTSNPRDLTPLKFR*YSVSWV Trigger: CACCCACGAGACTGAATACAAGCGAAATTTCAAGGG...TGTCAGGTCTCGGGGGTTGCTAGTAGAAGCCTGAAGGTCATCTACAGAATATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR CAA 90 bp | GCCAGCTTTTCAAAGTCCAATCATCTTAACACTGCACCTGTGTATACAGAAGGCACGTCCCAACAGCAGTaGCTGTCCGACATAATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ASFSKSNHLNTAPVYTEGTSQQQ*LSDIIW Trigger: CCAGATTATGTCGGACAGCAACTGCTGTTGGGACGT...GCCTTCTGTATACACAGGTGCAGTGTTAAGATGATTGGACTTTGAAAAGCTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR CAA 90 bp | GAATATTCTGTAGATGACCTTCAGGCTTCTACTAGCAACCCCCGAGACCTGACATCCACTCCAGGTATTTaGAAATCTGAGGGTCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: EYSVDDLQASTSNPRDLTSTPGI*KSEGHG Trigger: ACCATGACCCTCAGATTTCAAAATACCTGGAGTGGA...TGTCAGGTCTCGGGGGTTGCTAGTAGAAGCCTGAAGGTCATCTACAGAATATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR CAA 90 bp | TCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACACACTGGGAGAGAGGTTGTTaGCTGGAAGGTCTCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SESEVLEETPNPLKTLTHWERGC*LEGLSS Trigger: GGAGCTGAGACCTTCCAGCAAACAACCTCTCTCCCA...GTGTGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR CAA 90 bp | TCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACACACGCTCTGGGAGAGAGGTaGTTTGCTGGAAGGTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SESEVLEETPNPLKTLTHALGER*FAGRSQ Trigger: CTGAGACCTTCCAGCAAACAACCTCTCTCCCAGAGC...GTGTGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR CAA 90 bp | AAGTCCAATCATCTTAACACTGCACCTGTGTATACAGAAGGCGCTAATAAAACAGTCAGTCTGTCTGCCTaGGGTGTCTGTGTGTCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: KSNHLNTAPVYTEGANKTVSLSA*GVCVSG Trigger: ACCGGACACACAGACACCCAAGGCAGACAGACTGAC...TGTTTTATTAGCGCCTTCTGTATACACAGGTGCAGTGTTAAGATGATTGGACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS GCA 90 bp | CTAAAGGCTCATCTGCCTTCTTTACTGGAGTCAGCATCTCCAGACTaGTGTTTCCTTTCAAATACTCTCTTGACTTTGGTTCCTTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: LKAHLPSLLESASPD*CFLSNTLLTLVPSL Trigger: CAGTGAAGGAACCAAAGTCAAGAGAGTATTTGAAAGGAAACAGCAGTCTGGAGATGCTGACTCCAGTAAAGAAGGCAGATGAGCCTTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
||
| CDS GCA 90 bp | CCAAGCTCCAGCTTTATAGAAATACTGGGCTGGGCTCAGGAACTTTaGTCTATATTCAGAATTCACTTTTCCAAGCCTTTGGTGTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PSSSFIEILGWAQEL*SIFRIHFSKPLVSP Trigger: TGGAGACACCAAAGGCTTGGAAAAGTGAATTCTGAATATAGAGCAAAGTTCCTGAGCCCAGCCCAGTATTTCTATAAAGCTGGAGCTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
||
| CDS CCA 90 bp | TCAGTCTCGTGGGTGAATGTATTGCCTTGGAACTGTGGAATAATTTaGCTTTTATTACGGAAAACCCTGGGATCTATGCTCTGGGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SVSWVNVLPWNCGII*LLLRKTLGSMLWER Trigger: TCTCTCCCAGAGCATAGATCCCAGGGTTTTCCGTAATAAAAGCCAAATTATTCCACAGTTCCAAGGCAATACATTCACCCACGAGACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169817.3 |
||
| CDS-3UTR CAA 90 bp | TTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACATGGGAGAGAGGTTGTTaGCTGGAAGGTCTCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSESEVLEETPNPLKTLTWERGC*LEGLSS Trigger: GGAGCTGAGACCTTCCAGCAAACAACCTCTCTCCCA...TGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR CAA 90 bp | AAATTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAGTCAGTCTGTCTGCCTaGGGTGTCTGTGTGTCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: KLSESEVLEETPNPLKTLVSLSA*GVCVSG Trigger: ACCGGACACACAGACACCCAAGGCAGACAGACTGAC...TAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR CAA 90 bp | TCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACACACCCCTTGAAATTTCGCTaGTATTCAGTCTCGTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SESEVLEETPNPLKTLTHPLKFR*YSVSWV Trigger: CACCCACGAGACTGAATACAAGCGAAATTTCAAGGG...GTGTGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS CCA 90 bp | AAACAAACTGCCTTTGGTATTCAGAATTTCTCAAGGCATTATTCGTaGGAACAACGGCCAATCCAGCTTTCTTACGAAGATGCCTATCCA | + |
|
Preference number: 5 (lower is better) Translates to: KQTAFGIQNFSRHYS*EQRPIQLSYEDAYP Trigger: TGGATAGGCATCTTCGTAAGAAAGCTGGATTGGCCGTTGTTCCCACGAATAATGCCTTGAGAAATTCTGAATACCAAAGGCAGTTTGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS CCA 90 bp | TCGCTTGTATTCAGTCTCGTGGGTGAATGTATTGCCTTGGAACTGTaGAATAATTTGGCTTTTATTACGGAAAACCCTGGGATCTATGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLVFSLVGECIALEL*NNLAFITENPGIYA Trigger: AGCATAGATCCCAGGGTTTTCCGTAATAAAAGCCAAATTATTCCACAGTTCCAAGGCAATACATTCACCCACGAGACTGAATACAAGCGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169817.3 |
||
| CDS-3UTR CAA 90 bp | TCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACACACTCCACTCCAGGTATTTaGAAATCTGAGGGTCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: SESEVLEETPNPLKTLTHSTPGI*KSEGHG Trigger: ACCATGACCCTCAGATTTCAAAATACCTGGAGTGGA...GTGTGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR CAA 90 bp | TTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACAATTGGCATCTTCTCCTaGCTCAGCCTCTTGTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LSESEVLEETPNPLKTLTIGIFS*LSLLWL Trigger: AAGCCACAAGAGGCTGAGCAAGGAGAAGATGCCAAT...TGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR CAA 90 bp | AAATTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACGTCCCAACAGCAGTaGCTGTCCGACATAATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KLSESEVLEETPNPLKTLTSQQQ*LSDIIW Trigger: CCAGATTATGTCGGACAGCAACTGCTGTTGGGACGT...TAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR CAA 90 bp | TTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACATTAGAGAACCCTGGTTaGACAGGTTCTCCTTCACCC | + |
|
Preference number: 5 (lower is better) Translates to: LSESEVLEETPNPLKTLTLENPG*TGSPSP Trigger: GGGTGAAGGAGAACCTGTCAAACCAGGGTTCTCTAA...TGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163238.9 |
||
| CDS GCA 90 bp | GATGCAAACACTGGAGCGCTTTCTTTAGAAGTCTTCCAAACAAACTaGCTTTGGTATTCAGAATTTCTCAAGGCATTATTCGTGGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: DANTGALSLEVFQTN*LWYSEFLKALFVGT Trigger: TGTTCCCACGAATAATGCCTTGAGAAATTCTGAATACCAAAGGCAGTTTGTTTGGAAGACTTCTAAAGAAAGCGCTCCAGTGTTTGCATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR CAA 90 bp | AAGTCCAATCATCTTAACACTGCACCTGTGTATACAGAAGGCGCTAATAAAACATCCACTCCAGGTATTTaGAAATCTGAGGGTCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: KSNHLNTAPVYTEGANKTSTPGI*KSEGHG Trigger: ACCATGACCCTCAGATTTCAAAATACCTGGAGTGGA...TGTTTTATTAGCGCCTTCTGTATACACAGGTGCAGTGTTAAGATGATTGGACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR CAA 90 bp | CTTAACACTGCACCTGTGTATACAGAAGGCGCTAATAAAACAGTGAGATTCTTTTCGTGGGTGAATGTATaGCCTTGGAACTGTGGAATA | + |
|
Preference number: 5 (lower is better) Translates to: LNTAPVYTEGANKTVRFFSWVNV*PWNCGI Trigger: TATTCCACAGTTCCAAGGCAATACATTCACCCACGA...AAAGAATCTCACTGTTTTATTAGCGCCTTCTGTATACACAGGTGCAGTGTTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR CAA 90 bp | TCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACACACTTTCTTTCTTCTAGTTaGGTAGGAGGGTGTTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SESEVLEETPNPLKTLTHFLSSS*VGGCFW Trigger: CCAGAAACACCCTCCTACCAAACTAGAAGAAAGAAA...GTGTGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
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| CDS CCA 90 bp | TCGCTTGTATTCAGTCTCGTGGGTGAATGTATTGCCTTGGAACTGTaGAATAATTTGGCTTTTATTACGGAAAACCTGATTGGATGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SLVFSLVGECIALEL*NNLAFITENLIGCK Trigger: TTTGCATCCAATCAGGTTTTCCGTAATAAAAGCCAAATTATTCCACAGTTCCAAGGCAATACATTCACCCACGAGACTGAATACAAGCGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR CAA 90 bp | TTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACATCGTGGGTGAATGTATaGCCTTGGAACTGTGGAATA | + |
|
Preference number: 5 (lower is better) Translates to: LSESEVLEETPNPLKTLTSWVNV*PWNCGI Trigger: TATTCCACAGTTCCAAGGCAATACATTCACCCACGA...TGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
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| CDS-3UTR CAA 90 bp | AAATTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTACCCTTGAAATTTCGCTaGTATTCAGTCTCGTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: KLSESEVLEETPNPLKTLPLKFR*YSVSWV Trigger: CACCCACGAGACTGAATACAAGCGAAATTTCAAGGG...TAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR CAA 90 bp | TCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACACACAATACTCTCTTGACTTaGGTTCCTTCACTGGAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: SESEVLEETPNPLKTLTHNTLLT*VPSLEL Trigger: TAACTCCAGTGAAGGAACCAAAGTCAAGAGAGTATT...GTGTGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR CAA 90 bp | AAGTCCAATCATCTTAACACTGCACCTGTGTATACAGAAGGCGCTAATAAAACACTGGGCTCAGGAACTTaGCTCTATATTCAGAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: KSNHLNTAPVYTEGANKTLGSGT*LYIQNS Trigger: TGAATTCTGAATATAGAGCAAAGTTCCTGAGCCCAG...TGTTTTATTAGCGCCTTCTGTATACACAGGTGCAGTGTTAAGATGATTGGACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS-3UTR CAA 90 bp | AAGTCCAATCATCTTAACACTGCACCTGTGTATACAGAAGGCGCTAATAAAACATTTCTTTCTTCTAGTTaGGTAGGAGGGTGTTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KSNHLNTAPVYTEGANKTFLSSS*VGGCFW Trigger: CCAGAAACACCCTCCTACCAAACTAGAAGAAAGAAA...TGTTTTATTAGCGCCTTCTGTATACACAGGTGCAGTGTTAAGATGATTGGACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
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| CDS GCA 90 bp | GAACTGTGGAATAATTTGGCTTTTATTACGGAAAACCTGATTGGATaGAAACACTGGAGCGCTTTCTTTAGAAGTCTTCCAAACAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: ELWNNLAFITENLIG*KHWSAFFRSLPNKL Trigger: CAGTTTGTTTGGAAGACTTCTAAAGAAAGCGCTCCAGTGTTTGCATCCAATCAGGTTTTCCGTAATAAAAGCCAAATTATTCCACAGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
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| CDS CCA 90 bp | TTCACTGGAGTTAAACCCTTGAAATTTCGCTTGTATTCAGTCTCGTaGGTGAATGTATTGCCTTGGAACTGTGGAATAATTTGGCTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: FTGVKPLKFRLYSVS*VNVLPWNCGIIWLL Trigger: TAAAAGCCAAATTATTCCACAGTTCCAAGGCAATACATTCACCCACGAGACTGAATACAAGCGAAATTTCAAGGGTTTAACTCCAGTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
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| CDS-3UTR CAA 90 bp | TCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACACACACTGGAGTTAAACCCTaGAAATTTCGCTTGTATTCA | + |
|
Preference number: 5 (lower is better) Translates to: SESEVLEETPNPLKTLTHTGVKP*KFRLYS Trigger: TGAATACAAGCGAAATTTCAAGGGTTTAACTCCAGT...GTGTGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
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| CDS-3UTR CAA 90 bp | TTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACACTGGGCTCAGGAACTTaGCTCTATATTCAGAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: LSESEVLEETPNPLKTLTLGSGT*LYIQNS Trigger: TGAATTCTGAATATAGAGCAAAGTTCCTGAGCCCAG...TGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
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| CDS CCA 90 bp | AATAATTTGGCTTTTATTACGGAAAACCTGATTGGATGCAAACACTaGAGCGCTTTCTTTAGAAGTCTTCCAAACAAACTGCCTTTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: NNLAFITENLIGCKH*SAFFRSLPNKLPLV Trigger: TACCAAAGGCAGTTTGTTTGGAAGACTTCTAAAGAAAGCGCTCCAGTGTTTGCATCCAATCAGGTTTTCCGTAATAAAAGCCAAATTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
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| CDS-3UTR CAA 90 bp | GAAAAATATGTACAGCCAGCTTTTCAAAGTCCAATCATCTTAACACTGCACCTGACTGGAGTTAAACCCTaGAAATTTCGCTTGTATTCA | + |
|
Preference number: 5 (lower is better) Translates to: EKYVQPAFQSPIILTLHLTGVKP*KFRLYS Trigger: TGAATACAAGCGAAATTTCAAGGGTTTAACTCCAGT...CAGGTGCAGTGTTAAGATGATTGGACTTTGAAAAGCTGGCTGTACATATTTTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
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| CDS-3UTR CAA 90 bp | TTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACAAATACTCTCTTGACTTaGGTTCCTTCACTGGAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: LSESEVLEETPNPLKTLTNTLLT*VPSLEL Trigger: TAACTCCAGTGAAGGAACCAAAGTCAAGAGAGTATT...TGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
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| CDS-3UTR CAA 90 bp | AAATTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTACTGGGCTCAGGAACTTaGCTCTATATTCAGAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: KLSESEVLEETPNPLKTLLGSGT*LYIQNS Trigger: TGAATTCTGAATATAGAGCAAAGTTCCTGAGCCCAG...TAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
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| CDS-3UTR CAA 90 bp | AAATTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTATTTCTTTCTTCTAGTTaGGTAGGAGGGTGTTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KLSESEVLEETPNPLKTLFLSSS*VGGCFW Trigger: CCAGAAACACCCTCCTACCAAACTAGAAGAAAGAAA...TAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR CAA 90 bp | TTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAACAACTGGAGTTAAACCCTaGAAATTTCGCTTGTATTCA | + |
|
Preference number: 5 (lower is better) Translates to: LSESEVLEETPNPLKTLTTGVKP*KFRLYS Trigger: TGAATACAAGCGAAATTTCAAGGGTTTAACTCCAGT...TGTTAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS-3UTR CAA 90 bp | AAATTATCTGAGTCAGAAGTGTTAGAAGAAACTCCAAACCCTCTGAAAACCTTAAATACTCTCTTGACTTaGGTTCCTTCACTGGAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: KLSESEVLEETPNPLKTLNTLLT*VPSLEL Trigger: TAACTCCAGTGAAGGAACCAAAGTCAAGAGAGTATT...TAAGGTTTTCAGAGGGTTTGGAGTTTCTTCTAACACTTCTGACTCAGATAATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
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| CDS CCA 72 bp | GATCCTGCTGGACGGATGACAGTAAGGCGGGGCACATaGAGGCAGCTGCCCAGGGGTGCTGGGCTGACGGTC | + |
|
Preference number: 6 (lower is better) Translates to: DPAGRMTVRRGT*RQLPRGAGLTV Trigger: GACCGTCAGCCCAGCACCCCTGGGCAGCTGCCTCCATGTGCCCCGCCTTACTGTCATCCGTCCAGCAGGATC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
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| CDS TCA 72 bp | TCGTGCTCTCCTCAGCATCCCAAGCCAGCTTCCTCCTaGCCGAGGCGGCAGGCTCTGGCATCTCCAGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SCSPQHPKPASS*PRRQALASPVS Trigger: GGAGACTGGAGATGCCAGAGCCTGCCGCCTCGGTCAGGAGGAAGCTGGCTTGGGATGCTGAGGAGAGCACGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
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| CDS CCA 72 bp | CCGAGGCGGCAGGCTCTGGCATCTCCAGTCTCCTGGTaGAGTTTTTCAGGGGCTGCTCTCCCGAGGCAACTT | + |
|
Preference number: 6 (lower is better) Translates to: PRRQALASPVSW*SFSGAALPRQL Trigger: AAGTTGCCTCGGGAGAGCAGCCCCTGAAAAACTCCACCAGGAGACTGGAGATGCCAGAGCCTGCCGCCTCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
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| CDS GCA 72 bp | ACTGCGCCACCAACAGCTGGCGTCGTGAGATCATGGTaGGTCCGCTGGATACCGAGTTCTCTCAGCCTCGGT | + |
|
Preference number: 6 (lower is better) Translates to: TAPPTAGVVRSW*VRWIPSSLSLG Trigger: ACCGAGGCTGAGAGAACTCGGTATCCAGCGGACGCACCATGATCTCACGACGCCAGCTGTTGGTGGCGCAGT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
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| CDS GCA 72 bp | TGTGTGTCCGGTTTCTCCAGCTCTACCGCACAGGTCTaGTTGTCCTGTCCTCTCTCCTCTCTCCCGTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: CVSGFSSSTAQV*LSCPLSSLPSS Trigger: GGAGGACGGGAGAGAGGAGAGAGGACAGGACAAGCAGACCTGTGCGGTAGAGCTGGAGAAACCGGACACACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
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| CDS CCA 72 bp | CCAACAGCTGGCGTCGTGAGATCATGGTGCGTCCGCTaGATACCGAGTTCTCTCAGCCTCGGTGTAGGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: PTAGVVRSWCVR*IPSSLSLGVGS Trigger: GCTTCCTACACCGAGGCTGAGAGAACTCGGTATCCAGCGGACGCACCATGATCTCACGACGCCAGCTGTTGG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
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| CDS CCA 72 bp | AAGACTGCGCCACCAACAGCTGGCGTCGTGAGATCATaGTGCGTCCGCTGGATACCGAGTTCTCTCAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: KTAPPTAGVVRS*CVRWIPSSLSL Trigger: GAGGCTGAGAGAACTCGGTATCCAGCGGACGCACCATGATCTCACGACGCCAGCTGTTGGTGGCGCAGTCTT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
||
| CDS CAA 90 bp | CACGGTGGCTCTTCCTACCCTGGGATCTATGCTCTGGGAGAGAGGTaGTTTGCTGGAAGGTCTCAGCTCCACATCCGCGCTAACTGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: HGGSSYPGIYALGER*FAGRSQLHIRANWR Trigger: GCGCCAGTTAGCGCGGATGTGGAGCTGAGACCTTCCAGCAAACAACCTCTCTCCCAGAGCATAGATCCCAGGGTAGGAAGAGCCACCGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
||
| CDS CAA 90 bp | GTGGCTCTTCCTACCCTGGGATCTATGCTCTGGGAGAGAGGTTGTTaGCTGGAAGGTCTCAGCTCCACATCCGCGCTAACTGGCGCATGG | + |
|
Preference number: 6 (lower is better) Translates to: VALPTLGSMLWERGC*LEGLSSTSALTGAW Trigger: CCATGCGCCAGTTAGCGCGGATGTGGAGCTGAGACCTTCCAGCAAACAACCTCTCTCCCAGAGCATAGATCCCAGGGTAGGAAGAGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
||
| CDS TCA 72 bp | GAGACACTAAGACTGCGCCACCAACAGCTGGCGTCGTaGGATCATGGTGCGTCCGCTGGATACCGAGTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ETLRLRHQQLAS*DHGASAGYRVL Trigger: GAGAACTCGGTATCCAGCGGACGCACCATGATCTCACGACGCCAGCTGTTGGTGGCGCAGTCTTAGTGTCTC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
||
| CDS CCA 72 bp | TCTGAGCTCGGGCTAGAGTCTGGAAAGCCCGGAGGCTaGAAACTGCAGAGCGAGCAGAGATCTCAGACAGTC | + |
|
Preference number: 6 (lower is better) Translates to: SELGLESGKPGG*KLQSEQRSQTV Trigger: GACTGTCTGAGATCTCTGCTCGCTCTGCAGTTTCCAGCCTCCGGGCTTTCCAGACTCTAGCCCGAGCTCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
||
| CDS TCA 72 bp | GTGTCTGAAACCCCTTCAGCTCTCGAGTCCGCAGAATaGGACCGAGTTCTCTTGGGAACCCTGGAGGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: VSETPSALESAE*DRVLLGTLEAS Trigger: AGAGGCCTCCAGGGTTCCCAAGAGAACTCGGTCTCATTCTGCGGACTCGAGAGCTGAAGGGGTTTCAGACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 ENSMUST00000219087.2 |
||
| CDS TCA 72 bp | TCTCAGCCTCGGTGTAGGAAGCCTGCCTCCCTTCCCTaGGGAAACAGAAGATGTCTCCGACCCTTCTGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: SQPRCRKPASLP*GNRRCLRPFCQ Trigger: CTGACAGAAGGGTCGGAGACATCTTCTGTTTCCTCAGGGAAGGGAGGCAGGCTTCCTACACCGAGGCTGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
||
| CDS GCA 72 bp | GCGCTAACTGGCGCATGGCTTCTCGTGACACCCTGGTaGTTTTCCACAGTGTCTGAAACCCCTTCAGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ALTGAWLLVTPW*FSTVSETPSAL Trigger: GAGAGCTGAAGGGGTTTCAGACACTGTGGAAAAGCACCAGGGTGTCACGAGAAGCCATGCGCCAGTTAGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 ENSMUST00000219087.2 |
||
| CDS CCA 72 bp | TCCGCGCTAACTGGCGCATGGCTTCTCGTGACACCCTaGTGCTTTTCCACAGTGTCTGAAACCCCTTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SALTGAWLLVTP*CFSTVSETPSA Trigger: AGCTGAAGGGGTTTCAGACACTGTGGAAAAGCACCAGGGTGTCACGAGAAGCCATGCGCCAGTTAGCGCGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 ENSMUST00000219087.2 |
||
| CDS CCA 72 bp | TTTGCTGGAAGGTCTCAGCTCCACATCCGCGCTAACTaGCGCATGGCTTCTCGTGACACCCTGGTGCTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: FAGRSQLHIRAN*RMASRDTLVLF Trigger: GAAAAGCACCAGGGTGTCACGAGAAGCCATGCGCCAGTTAGCGCGGATGTGGAGCTGAGACCTTCCAGCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 ENSMUST00000219087.2 |
||
| CDS CAA 90 bp | AGATGCCTATCCAACCTGGGATCTATGCTCTGGGAGAGAGGTTGTTaGCTGGAAGGTCTCAGCTCCACATCCGCGCTAACTGGCGCATGG | + |
|
Preference number: 6 (lower is better) Translates to: RCLSNLGSMLWERGC*LEGLSSTSALTGAW Trigger: CCATGCGCCAGTTAGCGCGGATGTGGAGCTGAGACCTTCCAGCAAACAACCTCTCTCCCAGAGCATAGATCCCAGGTTGGATAGGCATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS CAA 90 bp | ACGAAGATGCCTATCCAACCTGGGATCTATGCTCTGGGAGAGAGGTaGTTTGCTGGAAGGTCTCAGCTCCACATCCGCGCTAACTGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: TKMPIQPGIYALGER*FAGRSQLHIRANWR Trigger: GCGCCAGTTAGCGCGGATGTGGAGCTGAGACCTTCCAGCAAACAACCTCTCTCCCAGAGCATAGATCCCAGGTTGGATAGGCATCTTCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS CAA 90 bp | GTCCTGTGGTTTGTAAGGTCTCCAGCAAGATCCAGTGCTCGGATGTaGCTACTGACGGTGCCTTCCGAGCTTGTGACTGAGGAGACGTCC | + |
|
Preference number: 6 (lower is better) Translates to: VLWFVRSPARSSARM*LLTVPSELVTEETS Trigger: GGACGTCTCCTCAGTCACAAGCTCGGAAGGCACCGTCAGTAGCAACATCCGAGCACTGGATCTTGCTGGAGACCTTACAAACCACAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
||
| CDS CAA 90 bp | GAGGAAACAGAAGATGTCTCCGACCCTTCTGTCAGTCTGTCTGCCTaGGGTGTCTGTGTGTCCGGTTTCTCCAGCTCTACCGCACAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: EETEDVSDPSVSLSA*GVCVSGFSSSTAQV Trigger: GACCTGTGCGGTAGAGCTGGAGAAACCGGACACACAGACACCCAAGGCAGACAGACTGACAGAAGGGTCGGAGACATCTTCTGTTTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
||
| CDS TCA 72 bp | AGATTCGGCCTTTTCTCGGAGCTCCTTAACCTGGTTTaGCAGGTTCTCCTTCACCCGGGTCCAAGCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RFGLFSELLNLV*QVLLHPGPSSS Trigger: GCTGGAGCTTGGACCCGGGTGAAGGAGAACCTGTCAAACCAGGTTAAGGAGCTCCGAGAAAAGGCCGAATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020437.13 ENSMUST00000164077.9 |
||
| CDS TCA 72 bp | GATGTTGCTACTGACGGTGCCTTCCGAGCTTGTGACTaGGGAGACGTCCCAACAGCAGTTGCTGTCCGACAT | + |
|
Preference number: 6 (lower is better) Translates to: DVATDGAFRACD*GDVPTAVAVRH Trigger: ATGTCGGACAGCAACTGCTGTTGGGACGTCTCCTCAGTCACAAGCTCGGAAGGCACCGTCAGTAGCAACATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
||
| CDS GCA 72 bp | GGTCCTGTGGTTTGTAAGGTCTCCAGCAAGATCCAGTaGTCGGATGTTGCTACTGACGGTGCCTTCCGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: GPVVCKVSSKIQ*SDVATDGAFRA Trigger: AGCTCGGAAGGCACCGTCAGTAGCAACATCCGAGCACTGGATCTTGCTGGAGACCTTACAAACCACAGGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
||
| CDS GCA 72 bp | GTTTCTAAGCCATCTTGGGAGGACGCTCTCCTCCTCTaGTCGAGGCCTGGTGGCTTCACTTTAGATGGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: VSKPSWEDALLL*SRPGGFTLDGD Trigger: GTCTCCATCTAAAGTGAAGCCACCAGGCCTCGAGCAGAGGAGGAGAGCGTCCTCCCAAGATGGCTTAGAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
||
| CDS CCA 72 bp | ATTGGCATCTTCTCCTTGCTCAGCCTCTTGTGGCTTTaGCGTTCCAAAGGCCTGGGGTTCTGGTGGGACAAG | + |
|
Preference number: 6 (lower is better) Translates to: IGIFSLLSLLWL*RSKGLGFWWDK Trigger: CTTGTCCCACCAGAACCCCAGGCCTTTGGAACGCCAAAGCCACAAGAGGCTGAGCAAGGAGAAGATGCCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 ENSMUST00000219087.2 |
||
| CDS CCA 72 bp | CAGCTCTCGAGTCCGCAGAATGAGACCGAGTTCTCTTaGGAACCCTGGAGGCCTCTAGTGAGAGAACTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: QLSSPQNETEFS*EPWRPLVRELL Trigger: AAGCAGTTCTCTCACTAGAGGCCTCCAGGGTTCCCAAGAGAACTCGGTCTCATTCTGCGGACTCGAGAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 ENSMUST00000219087.2 |
||
| CDS CCA 72 bp | AAGATGTCTCCGACCCTTCTGTCAGTCTGTCTGCCTTaGGTGTCTGTGTGTCCGGTTTCTCCAGCTCTACCG | + |
|
Preference number: 6 (lower is better) Translates to: KMSPTLLSVCLP*VSVCPVSPALP Trigger: CGGTAGAGCTGGAGAAACCGGACACACAGACACCCAAGGCAGACAGACTGACAGAAGGGTCGGAGACATCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
||
| CDS CAA 72 bp | GATTGGCATCTTCTCCTTGCTCAGCCTCTTGTGGCTTaGGCGTTCCAAAGGCCTGGGGTTCTGGTGGGACAA | + |
|
Preference number: 6 (lower is better) Translates to: DWHLLLAQPLVA*AFQRPGVLVGQ Trigger: TTGTCCCACCAGAACCCCAGGCCTTTGGAACGCCAAAGCCACAAGAGGCTGAGCAAGGAGAAGATGCCAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 ENSMUST00000219087.2 |
||
| CDS CAA 72 bp | CCTATCCAACCTGGGATCTATGCTCTGGGAGAGAGGTaGTTTGCTGGAAGGTCTCAGCTCCACATCCGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: PIQPGIYALGER*FAGRSQLHIRA Trigger: AGCGCGGATGTGGAGCTGAGACCTTCCAGCAAACAACCTCTCTCCCAGAGCATAGATCCCAGGTTGGATAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS CAA 72 bp | GAAGATGTCTCCGACCCTTCTGTCAGTCTGTCTGCCTaGGGTGTCTGTGTGTCCGGTTTCTCCAGCTCTACC | + |
|
Preference number: 6 (lower is better) Translates to: EDVSDPSVSLSA*GVCVSGFSSST Trigger: GGTAGAGCTGGAGAAACCGGACACACAGACACCCAAGGCAGACAGACTGACAGAAGGGTCGGAGACATCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
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| CDS CAA 72 bp | ACGGAAAACCCTGGGATCTATGCTCTGGGAGAGAGGTaGTTTGCTGGAAGGTCTCAGCTCCACATCCGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: TENPGIYALGER*FAGRSQLHIRA Trigger: AGCGCGGATGTGGAGCTGAGACCTTCCAGCAAACAACCTCTCTCCCAGAGCATAGATCCCAGGGTTTTCCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169817.3 |
||
| CDS CAA 72 bp | CCTACCCTGGGATCTATGCTCTGGGAGAGAGGTTGTTaGCTGGAAGGTCTCAGCTCCACATCCGCGCTAACT | + |
|
Preference number: 6 (lower is better) Translates to: PTLGSMLWERGC*LEGLSSTSALT Trigger: AGTTAGCGCGGATGTGGAGCTGAGACCTTCCAGCAAACAACCTCTCTCCCAGAGCATAGATCCCAGGGTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
||
| CDS CAA 72 bp | TCTTCCTACCCTGGGATCTATGCTCTGGGAGAGAGGTaGTTTGCTGGAAGGTCTCAGCTCCACATCCGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSYPGIYALGER*FAGRSQLHIRA Trigger: AGCGCGGATGTGGAGCTGAGACCTTCCAGCAAACAACCTCTCTCCCAGAGCATAGATCCCAGGGTAGGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
||
| CDS TCA 72 bp | GCTTCTCGTGACACCCTGGTGCTTTTCCACAGTGTCTaGAACCCCTTCAGCTCTCGAGTCCGCAGAATGAGA | + |
|
Preference number: 6 (lower is better) Translates to: ASRDTLVLFHSV*NPFSSRVRRMR Trigger: TCTCATTCTGCGGACTCGAGAGCTGAAGGGGTTTCAGACACTGTGGAAAAGCACCAGGGTGTCACGAGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 ENSMUST00000219087.2 |
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| CDS TCA 72 bp | TGCAAATTGTTCGTCCTGGGTTTTCCCATGTTGTGCTaGAACTCAGGGTCTCGCAGACGGCCCTGGATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: CKLFVLGFPMLC*NSGSRRRPWIL Trigger: CAGGATCCAGGGCCGTCTGCGAGACCCTGAGTTTCAGCACAACATGGGAAAACCCAGGACGAACAATTTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000169817.3 |
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| CDS GCA 72 bp | AACAGAAGATGTCTCCGACCCTTCTGTCAGTCTGTCTaGCTTGGGTGTCTGTGTGTCCGGTTTCTCCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: NRRCLRPFCQSV*LGCLCVRFLQL Trigger: GAGCTGGAGAAACCGGACACACAGACACCCAAGGCAGACAGACTGACAGAAGGGTCGGAGACATCTTCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
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| CDS CAA 72 bp | TGCTTCTTGATTGGCATCTTCTCCTTGCTCAGCCTCTaGTGGCTTTGGCGTTCCAAAGGCCTGGGGTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CFLIGIFSLLSL*WLWRSKGLGFW Trigger: CCAGAACCCCAGGCCTTTGGAACGCCAAAGCCACAAGAGGCTGAGCAAGGAGAAGATGCCAATCAAGAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 ENSMUST00000219087.2 |
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| CDS CAA 72 bp | TCCAACCTGGGATCTATGCTCTGGGAGAGAGGTTGTTaGCTGGAAGGTCTCAGCTCCACATCCGCGCTAACT | + |
|
Preference number: 6 (lower is better) Translates to: SNLGSMLWERGC*LEGLSSTSALT Trigger: AGTTAGCGCGGATGTGGAGCTGAGACCTTCCAGCAAACAACCTCTCTCCCAGAGCATAGATCCCAGGTTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS CAA 72 bp | TCCGAGCTTGTGACTGAGGAGACGTCCCAACAGCAGTaGCTGTCCGACATAATCTGGTTCAGATGGTCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: SELVTEETSQQQ*LSDIIWFRWSR Trigger: TCGGGACCATCTGAACCAGATTATGTCGGACAGCAACTGCTGTTGGGACGTCTCCTCAGTCACAAGCTCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
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| CDS CAA 72 bp | CCTCTGCATACCACATGGCATTTAGAGAACCCTGGTTaGACAGGTTCTCCTTCACCCGGGTCCAAGCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PLHTTWHLENPG*TGSPSPGSKLQ Trigger: CTGGAGCTTGGACCCGGGTGAAGGAGAACCTGTCAAACCAGGGTTCTCTAAATGCCATGTGGTATGCAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163238.9 ENSMUST00000169817.3 |
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| CDS CAA 90 bp | TTATTACGGAAAACCCTGGGATCTATGCTCTGGGAGAGAGGTTGTTaGCTGGAAGGTCTCAGCTCCACATCCGCGCTAACTGGCGCATGG | + |
|
Preference number: 6 (lower is better) Translates to: LLRKTLGSMLWERGC*LEGLSSTSALTGAW Trigger: CCATGCGCCAGTTAGCGCGGATGTGGAGCTGAGACCTTCCAGCAAACAACCTCTCTCCCAGAGCATAGATCCCAGGGTTTTCCGTAATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169817.3 |
||
| CDS CAA 90 bp | GCTTTTATTACGGAAAACCCTGGGATCTATGCTCTGGGAGAGAGGTaGTTTGCTGGAAGGTCTCAGCTCCACATCCGCGCTAACTGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: AFITENPGIYALGER*FAGRSQLHIRANWR Trigger: GCGCCAGTTAGCGCGGATGTGGAGCTGAGACCTTCCAGCAAACAACCTCTCTCCCAGAGCATAGATCCCAGGGTTTTCCGTAATAAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169817.3 |
||
| CDS CCA 72 bp | AGTCCGCAGAATGAGACCGAGTTCTCTTGGGAACCCTaGAGGCCTCTAGTGAGAGAACTGCTTCTTGATTGG | + |
|
Preference number: 6 (lower is better) Translates to: SPQNETEFSWEP*RPLVRELLLDW Trigger: CCAATCAAGAAGCAGTTCTCTCACTAGAGGCCTCCAGGGTTCCCAAGAGAACTCGGTCTCATTCTGCGGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 ENSMUST00000219087.2 |
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| CDS CAA 72 bp | TTTGTAAGGTCTCCAGCAAGATCCAGTGCTCGGATGTaGCTACTGACGGTGCCTTCCGAGCTTGTGACTGAG | + |
|
Preference number: 6 (lower is better) Translates to: FVRSPARSSARM*LLTVPSELVTE Trigger: CTCAGTCACAAGCTCGGAAGGCACCGTCAGTAGCAACATCCGAGCACTGGATCTTGCTGGAGACCTTACAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
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| CDS CAA 72 bp | AAAACCCTGGGATCTATGCTCTGGGAGAGAGGTTGTTaGCTGGAAGGTCTCAGCTCCACATCCGCGCTAACT | + |
|
Preference number: 6 (lower is better) Translates to: KTLGSMLWERGC*LEGLSSTSALT Trigger: AGTTAGCGCGGATGTGGAGCTGAGACCTTCCAGCAAACAACCTCTCTCCCAGAGCATAGATCCCAGGGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169817.3 |
||
| CDS CAA 90 bp | ACGGTGCCTTCCGAGCTTGTGACTGAGGAGACGTCCCAACAGCAGTaGCTGTCCGACATAATCTGGTTCAGATGGTCCCGAGAAAAATGT | + |
|
Preference number: 6 (lower is better) Translates to: TVPSELVTEETSQQQ*LSDIIWFRWSREKC Trigger: ACATTTTTCTCGGGACCATCTGAACCAGATTATGTCGGACAGCAACTGCTGTTGGGACGTCTCCTCAGTCACAAGCTCGGAAGGCACCGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
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| CDS GCA 72 bp | GTGGGAACAACGGCCAATCCAGCTTTCTTACGAAGATaGCTATCCAACCTGGGATCTATGCTCTGGGAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: VGTTANPAFLRR*LSNLGSMLWER Trigger: TCTCTCCCAGAGCATAGATCCCAGGTTGGATAGGCATCTTCGTAAGAAAGCTGGATTGGCCGTTGTTCCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
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| CDS TCA 72 bp | CCTGGGGTTCTGGTGGGACAAGCGTATCCTTCTTTCTaGCGGTTCCGTTCCACTCCAGGTATTTTGAAATCT | + |
|
Preference number: 6 (lower is better) Translates to: PGVLVGQAYPSF*RFRSTPGILKS Trigger: AGATTTCAAAATACCTGGAGTGGAACGGAACCGTCAGAAAGAAGGATACGCTTGTCCCACCAGAACCCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 ENSMUST00000219087.2 |
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| CDS CCA 72 bp | CCAATCCAGCTTTCTTACGAAGATGCCTATCCAACCTaGGATCTATGCTCTGGGAGAGAGGTTGTTTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PIQLSYEDAYPT*DLCSGREVVCW Trigger: CCAGCAAACAACCTCTCTCCCAGAGCATAGATCCCAGGTTGGATAGGCATCTTCGTAAGAAAGCTGGATTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
||
| CDS CCA 72 bp | TTAGTAATGTCTTTCTTCAGAGTTTCTAAGCCATCTTaGGAGGACGCTCTCCTCCTCTGCTCGAGGCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: LVMSFFRVSKPS*EDALLLCSRPG Trigger: ACCAGGCCTCGAGCAGAGGAGGAGAGCGTCCTCCCAAGATGGCTTAGAAACTCTGAAGAAAGACATTACTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
||
| CDS CCA 72 bp | AGGCATCGTGTGGATGTAGCTGCAAATTGTTCGTCCTaGGTTTTCCCATGTTGTGCTGAAACTCAGGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: RHRVDVAANCSS*VFPCCAETQGL Trigger: GAGACCCTGAGTTTCAGCACAACATGGGAAAACCCAGGACGAACAATTTGCAGCTACATCCACACGATGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000169817.3 |
||
| CDS CCA 72 bp | TTAACCTCTGCATACCACATGGCATTTAGAGAACCCTaGTTTGACAGGTTCTCCTTCACCCGGGTCCAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LTSAYHMAFREP*FDRFSFTRVQA Trigger: AGCTTGGACCCGGGTGAAGGAGAACCTGTCAAACCAGGGTTCTCTAAATGCCATGTGGTATGCAGAGGTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163238.9 ENSMUST00000169817.3 |
||
| CDS CCA 72 bp | CTTTGGTGTCTCCATGAAGCAGGCTTCTTTACAGACTaGTCTGAGTCTTCCGACGCCATGTCTACTTCTAAG | + |
|
Preference number: 6 (lower is better) Translates to: LWCLHEAGFFTD*SESSDAMSTSK Trigger: CTTAGAAGTAGACATGGCGTCGGAAGACTCAGACCAGTCTGTAAAGAAGCCTGCTTCATGGAGACACCAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
||
| CDS CCA 72 bp | ATTCCTTTAAAAGAAACACGGTGGCTCTTCCTACCCTaGGATCTATGCTCTGGGAGAGAGGTTGTTTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: IPLKETRWLFLP*DLCSGREVVCW Trigger: CCAGCAAACAACCTCTCTCCCAGAGCATAGATCCCAGGGTAGGAAGAGCCACCGTGTTTCTTTTAAAGGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219087.2 |
||
| CDS CAA 72 bp | TTCGAAACAGGAAGAGTATCAGCAAATCTGAGCACATaGGCTTCACAGTCTTCTCGCAGAGGCAGGGGATCA | + |
|
Preference number: 6 (lower is better) Translates to: FETGRVSANLST*ASQSSRRGRGS Trigger: TGATCCCCTGCCTCTGCGAGAAGACTGTGAAGCCAATGTGCTCAGATTTGCTGATACTCTTCCTGTTTCGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
||
| CDS CCA 72 bp | CCGGGTCCAAGCTCCAGCTTTATAGAAATACTGGGCTaGGCTCAGGAACTTTGCTCTATATTCAGAATTCAC | + |
|
Preference number: 6 (lower is better) Translates to: PGPSSSFIEILG*AQELCSIFRIH Trigger: GTGAATTCTGAATATAGAGCAAAGTTCCTGAGCCCAGCCCAGTATTTCTATAAAGCTGGAGCTTGGACCCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
||
| CDS CCA 72 bp | ACTTTTCTTTCTTCTAGTTTGGTAGGAGGGTGTTTCTaGGGGGTCCTGTGGTTTGTAAGGTCTCCAGCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: TFLSSSLVGGCF*GVLWFVRSPAR Trigger: TCTTGCTGGAGACCTTACAAACCACAGGACCCCCCAGAAACACCCTCCTACCAAACTAGAAGAAAGAAAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
||
| CDS GCA 72 bp | GCATCTTCATCATTAAAGGCATCGTGTGGATGTAGCTaGAAATTGTTCGTCCTGGGTTTTCCCATGTTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: ASSSLKASCGCS*KLFVLGFPMLC Trigger: GCACAACATGGGAAAACCCAGGACGAACAATTTGCAGCTACATCCACACGATGCCTTTAATGATGAAGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000169817.3 |
||
| CDS CAA 90 bp | TTCAGTCTCGTGGGTGAATGTATTGCCTTGGAACTGTGGAATAATTaGGCTTTTATTACGGAAAACCCTGGGATCTATGCTCTGGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: FSLVGECIALELWNN*AFITENPGIYALGE Trigger: CTCTCCCAGAGCATAGATCCCAGGGTTTTCCGTAATAAAAGCCAAATTATTCCACAGTTCCAAGGCAATACATTCACCCACGAGACTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169817.3 |
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| CDS TCA 72 bp | CTTCTTTCTGACGGTTCCGTTCCACTCCAGGTATTTTaGAATCTGAGGGTCATGGTAGGGAACTCTTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: LLSDGSVPLQVF*NLRVMVGNSSF Trigger: AAAAGAAGAGTTCCCTACCATGACCCTCAGATTTCAAAATACCTGGAGTGGAACGGAACCGTCAGAAAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 ENSMUST00000219087.2 |
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| CDS CAA 72 bp | GGTTCCTTCACTGGAGTTAAACCCTTGAAATTTCGCTaGTATTCAGTCTCGTGGGTGAATGTATTGCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: GSFTGVKPLKFR*YSVSWVNVLPW Trigger: CCAAGGCAATACATTCACCCACGAGACTGAATACAAGCGAAATTTCAAGGGTTTAACTCCAGTGAAGGAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
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| CDS CAA 90 bp | CTTGACTTTGGTTCCTTCACTGGAGTTAAACCCTTGAAATTTCGCTaGTATTCAGTCTCGTGGGTGAATGTATTGCCTTGGAACTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: LDFGSFTGVKPLKFR*YSVSWVNVLPWNCG Trigger: TCCACAGTTCCAAGGCAATACATTCACCCACGAGACTGAATACAAGCGAAATTTCAAGGGTTTAACTCCAGTGAAGGAACCAAAGTCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
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| CDS GCA 72 bp | CATCTGCCTTCTTTACTGGAGTCAGCATCTCCAGACTaGTGTTTCCTTTCAAATACTCTCTTGACTTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: HLPSLLESASPD*CFLSNTLLTLV Trigger: AACCAAAGTCAAGAGAGTATTTGAAAGGAAACAGCAGTCTGGAGATGCTGACTCCAGTAAAGAAGGCAGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
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| CDS CCA 72 bp | GCCTTTGGTATTCAGAATTTCTCAAGGCATTATTCGTaGGAACAACGGCCAATCCAGCTTTCTTACGAAGAT | + |
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Preference number: 6 (lower is better) Translates to: AFGIQNFSRHYS*EQRPIQLSYED Trigger: ATCTTCGTAAGAAAGCTGGATTGGCCGTTGTTCCCACGAATAATGCCTTGAGAAATTCTGAATACCAAAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
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| CDS CCA 72 bp | TTCAGTCTCGTGGGTGAATGTATTGCCTTGGAACTGTaGAATAATTTGGCTTTTATTACGGAAAACCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: FSLVGECIALEL*NNLAFITENPG Trigger: CCCAGGGTTTTCCGTAATAAAAGCCAAATTATTCCACAGTTCCAAGGCAATACATTCACCCACGAGACTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169817.3 |
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| CDS CAA 90 bp | TTCAGTCTCGTGGGTGAATGTATTGCCTTGGAACTGTGGAATAATTaGGCTTTTATTACGGAAAACCTGATTGGATGCAAACACTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: FSLVGECIALELWNN*AFITENLIGCKHWS Trigger: GCTCCAGTGTTTGCATCCAATCAGGTTTTCCGTAATAAAAGCCAAATTATTCCACAGTTCCAAGGCAATACATTCACCCACGAGACTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
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| CDS CCA 72 bp | TTTGCTCTATATTCAGAATTCACTTTTCCAAGCCTTTaGTGTCTCCATGAAGCAGGCTTCTTTACAGACTGG | + |
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Preference number: 6 (lower is better) Translates to: FALYSEFTFPSL*CLHEAGFFTDW Trigger: CCAGTCTGTAAAGAAGCCTGCTTCATGGAGACACCAAAGGCTTGGAAAAGTGAATTCTGAATATAGAGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
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| CDS CAA 72 bp | GTGGGTGAATGTATTGCCTTGGAACTGTGGAATAATTaGGCTTTTATTACGGAAAACCCTGGGATCTATGCT | + |
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Preference number: 6 (lower is better) Translates to: VGECIALELWNN*AFITENPGIYA Trigger: AGCATAGATCCCAGGGTTTTCCGTAATAAAAGCCAAATTATTCCACAGTTCCAAGGCAATACATTCACCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169817.3 |
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| CDS CAA 90 bp | CTTGAAATTTCGCTTGTATTCAGTCTCGTGGGTGAATGTATTGCCTaGGAACTGTGGAATAATTTGGCTTTTATTACGGAAAACCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: LEISLVFSLVGECIA*ELWNNLAFITENPG Trigger: CCCAGGGTTTTCCGTAATAAAAGCCAAATTATTCCACAGTTCCAAGGCAATACATTCACCCACGAGACTGAATACAAGCGAAATTTCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169817.3 |
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| CDS CAA 90 bp | TTCAAATACTCTCTTGACTTTGGTTCCTTCACTGGAGTTAAACCCTaGAAATTTCGCTTGTATTCAGTCTCGTGGGTGAATGTATTGCCT | + |
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Preference number: 6 (lower is better) Translates to: FKYSLDFGSFTGVKP*KFRLYSVSWVNVLP Trigger: AGGCAATACATTCACCCACGAGACTGAATACAAGCGAAATTTCAAGGGTTTAACTCCAGTGAAGGAACCAAAGTCAAGAGAGTATTTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
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| CDS CCA 72 bp | GCTTTTATTACGGAAAACCTGATTGGATGCAAACACTaGAGCGCTTTCTTTAGAAGTCTTCCAAACAAACTG | + |
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Preference number: 6 (lower is better) Translates to: AFITENLIGCKH*SAFFRSLPNKL Trigger: CAGTTTGTTTGGAAGACTTCTAAAGAAAGCGCTCCAGTGTTTGCATCCAATCAGGTTTTCCGTAATAAAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
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| CDS CAA 90 bp | AAACCCTTGAAATTTCGCTTGTATTCAGTCTCGTGGGTGAATGTATaGCCTTGGAACTGTGGAATAATTTGGCTTTTATTACGGAAAACC | + |
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Preference number: 6 (lower is better) Translates to: KPLKFRLYSVSWVNV*PWNCGIIWLLLRKT Trigger: GGTTTTCCGTAATAAAAGCCAAATTATTCCACAGTTCCAAGGCAATACATTCACCCACGAGACTGAATACAAGCGAAATTTCAAGGGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
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| CDS GCA 72 bp | ACTGGAGCGCTTTCTTTAGAAGTCTTCCAAACAAACTaGCTTTGGTATTCAGAATTTCTCAAGGCATTATTC | + |
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Preference number: 6 (lower is better) Translates to: TGALSLEVFQTN*LWYSEFLKALF Trigger: GAATAATGCCTTGAGAAATTCTGAATACCAAAGGCAGTTTGTTTGGAAGACTTCTAAAGAAAGCGCTCCAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
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| CDS CCA 72 bp | TTCAGTCTCGTGGGTGAATGTATTGCCTTGGAACTGTaGAATAATTTGGCTTTTATTACGGAAAACCTGATT | + |
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Preference number: 6 (lower is better) Translates to: FSLVGECIALEL*NNLAFITENLI Trigger: AATCAGGTTTTCCGTAATAAAAGCCAAATTATTCCACAGTTCCAAGGCAATACATTCACCCACGAGACTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
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| CDS CCA 72 bp | GTTAAACCCTTGAAATTTCGCTTGTATTCAGTCTCGTaGGTGAATGTATTGCCTTGGAACTGTGGAATAATT | + |
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Preference number: 6 (lower is better) Translates to: VKPLKFRLYSVS*VNVLPWNCGII Trigger: AATTATTCCACAGTTCCAAGGCAATACATTCACCCACGAGACTGAATACAAGCGAAATTTCAAGGGTTTAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
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| CDS CAA 72 bp | GTGGGTGAATGTATTGCCTTGGAACTGTGGAATAATTaGGCTTTTATTACGGAAAACCTGATTGGATGCAAA | + |
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Preference number: 6 (lower is better) Translates to: VGECIALELWNN*AFITENLIGCK Trigger: TTTGCATCCAATCAGGTTTTCCGTAATAAAAGCCAAATTATTCCACAGTTCCAAGGCAATACATTCACCCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
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| CDS CAA 90 bp | CTTGAAATTTCGCTTGTATTCAGTCTCGTGGGTGAATGTATTGCCTaGGAACTGTGGAATAATTTGGCTTTTATTACGGAAAACCTGATT | + |
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Preference number: 6 (lower is better) Translates to: LEISLVFSLVGECIA*ELWNNLAFITENLI Trigger: AATCAGGTTTTCCGTAATAAAAGCCAAATTATTCCACAGTTCCAAGGCAATACATTCACCCACGAGACTGAATACAAGCGAAATTTCAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
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| CDS GCA 72 bp | AATAATTTGGCTTTTATTACGGAAAACCTGATTGGATaGAAACACTGGAGCGCTTTCTTTAGAAGTCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: NNLAFITENLIG*KHWSAFFRSLP Trigger: TGGAAGACTTCTAAAGAAAGCGCTCCAGTGTTTGCATCCAATCAGGTTTTCCGTAATAAAAGCCAAATTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 |
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| CDS CAA 72 bp | AAATTTCGCTTGTATTCAGTCTCGTGGGTGAATGTATaGCCTTGGAACTGTGGAATAATTTGGCTTTTATTA | + |
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Preference number: 6 (lower is better) Translates to: KFRLYSVSWVNV*PWNCGIIWLLL Trigger: TAATAAAAGCCAAATTATTCCACAGTTCCAAGGCAATACATTCACCCACGAGACTGAATACAAGCGAAATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020437.13 ENSMUST00000163238.9 ENSMUST00000164077.9 ENSMUST00000169817.3 |
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