Pregenerated sensors for MDH1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025963Ensembl transcript IDs: ENSMUST00000114094.3
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGACAGCGGTTTACATTCATTTATTTTTGAGGACATACAGCAATTaGCAAAAGCGGGATTGGATGTGGCAGCATGTGAATCTGCTAGAT | + |
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Preference number: 1 (lower is better) Translates to: KTAVYIHLFLRTYSN*QKRDWMWQHVNLLD Trigger: ATCTAGCAGATTCACATGCTGCCACATCCAATCCCGCTTTTGTCAATTGCTGTATGTCCTCAAAAATAAATGAATGTAAACCGCTGTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| 3UTR GCA 90 bp | TCTGCTAGATTTGGGGTCTATTTTATTTCACTGTTCTTCCCTAAGTaGAGACACCTGCAGGTCTTTCTGTCTTTCCTTCATATTTGTTCT | + |
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Preference number: 1 (lower is better) Translates to: SARFGVYFISLFFPK*RHLQVFLSFLHICS Trigger: AGAACAAATATGAAGGAAAGACAGAAAGACCTGCAGGTGTCTGCACTTAGGGAAGAACAGTGAAATAAAATAGACCCCAAATCTAGCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| 3UTR TCA 72 bp | GTTTACATTCATTTATTTTTGAGGACATACAGCAATTaGCAAAAGCGGGATTGGATGTGGCAGCATGTGAAT | + |
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Preference number: 3 (lower is better) Translates to: VYIHLFLRTYSN*QKRDWMWQHVN Trigger: ATTCACATGCTGCCACATCCAATCCCGCTTTTGTCAATTGCTGTATGTCCTCAAAAATAAATGAATGTAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| 3UTR TCA 72 bp | AGATCTTTAAGACAGCGGTTTACATTCATTTATTTTTaGGGACATACAGCAATTGACAAAAGCGGGATTGGA | + |
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Preference number: 3 (lower is better) Translates to: RSLRQRFTFIYF*GHTAIDKSGIG Trigger: TCCAATCCCGCTTTTGTCAATTGCTGTATGTCCTCAAAAATAAATGAATGTAAACCGCTGTCTTAAAGATCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS-3UTR TCA 90 bp | GGGTCTATTTTATTTCACTGTTCTTCCCTAAGTGCAGACACCTGCAGGTCTTTCAGTGCGGAGCACTGGTaGGGCCAAGTCCTGGGTTTC | + |
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Preference number: 4 (lower is better) Translates to: GSILFHCSSLSADTCRSFSAEHW*GQVLGF Trigger: GAAACCCAGGACTTGGCCTCACCAGTGCTCCGCACT...GAAAGACCTGCAGGTGTCTGCACTTAGGGAAGAACAGTGAAATAAAATAGACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS-3UTR TCA 90 bp | CTGTTCTTCCCTAAGTGCAGACACCTGCAGGTCTTTCTGTCTTTCCTTCATATTCCAGGTGGTGAGCCATaGTACCAGTACTTCAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: LFFPKCRHLQVFLSFLHIPGGEP*YQYFRV Trigger: CACCCTGAAGTACTGGTATCATGGCTCACCACCTGG...AATATGAAGGAAAGACAGAAAGACCTGCAGGTGTCTGCACTTAGGGAAGAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS-3UTR GCA 90 bp | GGGTCTATTTTATTTCACTGTTCTTCCCTAAGTGCAGACACCTGCAGGTCTTTCCCTCCTTTACCGTGGTaGAGAAGGACACAGTGCGGA | + |
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Preference number: 4 (lower is better) Translates to: GSILFHCSSLSADTCRSFPPLPW*RRTQCG Trigger: TCCGCACTGTGTCCTTCTGCACCACGGTAAAGGAGG...GAAAGACCTGCAGGTGTCTGCACTTAGGGAAGAACAGTGAAATAAAATAGACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS-3UTR GCA 90 bp | TTGGGGTCTATTTTATTTCACTGTTCTTCCCTAAGTGCAGACACCTGCAGGTCTTCAGGGTGGTGGCTATaGTGTGTGCAGCCAAGATGC | + |
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Preference number: 4 (lower is better) Translates to: LGSILFHCSSLSADTCRSSGWWL*CVQPRC Trigger: GCATCTTGGCTGCACACAGCATAGCCACCACCCTGA...AGACCTGCAGGTGTCTGCACTTAGGGAAGAACAGTGAAATAAAATAGACCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS-3UTR TCA 90 bp | TCTTCCCTAAGTGCAGACACCTGCAGGTCTTTCTGTCTTTCCTTCATATTTGTTCCATCACTATGCTTCTaGGGCAGTCCTCCCTTTGCT | + |
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Preference number: 4 (lower is better) Translates to: SSLSADTCRSFCLSFIFVPSLCF*GSPPFA Trigger: AGCAAAGGGAGGACTGCCTCAGAAGCATAGTGATGG...AACAAATATGAAGGAAAGACAGAAAGACCTGCAGGTGTCTGCACTTAGGGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS-3UTR TCA 90 bp | GGATTGGATGTGGCAGCATGTGAATCTGCTAGATTTGGGGTCTATTTTATTTCAATGATGACCTGGGCCTaGAGGAAGGCCTCCTTTACC | + |
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Preference number: 4 (lower is better) Translates to: GLDVAACESARFGVYFISMMTWA*RKASFT Trigger: GGTAAAGGAGGCCTTCCTTCAGGCCCAGGTCATCAT...TGAAATAAAATAGACCCCAAATCTAGCAGATTCACATGCTGCCACATCCAATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS-3UTR TCA 90 bp | GATTTGGGGTCTATTTTATTTCACTGTTCTTCCCTAAGTGCAGACACCTGCAGGGAATCAGATCGCCTGTaGGCCTGCTTAGTGTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: DLGSILFHCSSLSADTCRESDRL*ACLVSS Trigger: AGAAGACACTAAGCAGGCTCACAGGCGATCTGATTC...CCTGCAGGTGTCTGCACTTAGGGAAGAACAGTGAAATAAAATAGACCCCAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS-3UTR GCA 90 bp | GCAGCATGTGAATCTGCTAGATTTGGGGTCTATTTTATTTCACTGTTCTTCCCTCCAAAAGCAAGCCCCTaGCTCCACGATCCAGCAACT | + |
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Preference number: 4 (lower is better) Translates to: AACESARFGVYFISLFFPPKASP*LHDPAT Trigger: AGTTGCTGGATCGTGGAGGCAGGGGCTTGCTTTTGG...AGGGAAGAACAGTGAAATAAAATAGACCCCAAATCTAGCAGATTCACATGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS-3UTR GCA 90 bp | CTAAGTGCAGACACCTGCAGGTCTTTCTGTCTTTCCTTCATATTTGTTCTGGTTGCACACGTAAGTACCTaGACTGGCAATCCAGACCTG | + |
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Preference number: 4 (lower is better) Translates to: LSADTCRSFCLSFIFVLVAHVST*TGNPDL Trigger: CAGGTCTGGATTGCCAGTGCAGGTACTTACGTGTGC...AACCAGAACAAATATGAAGGAAAGACAGAAAGACCTGCAGGTGTCTGCACTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS-3UTR GCA 90 bp | GCAGCATGTGAATCTGCTAGATTTGGGGTCTATTTTATTTCACTGTTCTTCCCTAGGCAGTCCTCCCTTTaGTCCTGGTCAAACAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: AACESARFGVYFISLFFPRQSSL*SWSNRV Trigger: GACCCTGTTTGACCAGGAGCAAAGGGAGGACTGCCT...AGGGAAGAACAGTGAAATAAAATAGACCCCAAATCTAGCAGATTCACATGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS-3UTR CCA 90 bp | GGGTCTATTTTATTTCACTGTTCTTCCCTAAGTGCAGACACCTGCAGGTCTTTCCGTAAGTACCTGCACTaGCAATCCAGACCTGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: GSILFHCSSLSADTCRSFRKYLH*QSRPAK Trigger: CTTTGCAGGTCTGGATTGCCAGTGCAGGTACTTACG...GAAAGACCTGCAGGTGTCTGCACTTAGGGAAGAACAGTGAAATAAAATAGACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS-3UTR CCA 90 bp | GCTAGATTTGGGGTCTATTTTATTTCACTGTTCTTCCCTAAGTGCAGACACCTGAGTACTGCTTTTGCTTaGCCTTCTACCCCCAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: ARFGVYFISLFFPKCRHLSTAFA*PSTPRA Trigger: GGCTCTGGGGGTAGAAGGCCAAGCAAAAGCAGTACT...CAGGTGTCTGCACTTAGGGAAGAACAGTGAAATAAAATAGACCCCAAATCTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS-3UTR GCA 90 bp | TCATTTATTTTTGAGGACATACAGCAATTGACAAAAGCGGGATTGGATGTGGCAGGCCAGTACTGCTTTTaGTTGGCCTTCTACCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: SFIFEDIQQLTKAGLDVAGQYCF*LAFYPQ Trigger: CTGGGGGTAGAAGGCCAAGCAAAAGCAGTACTGGCC...TGCCACATCCAATCCCGCTTTTGTCAATTGCTGTATGTCCTCAAAAATAAATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS-3UTR GCA 90 bp | GCAGCATGTGAATCTGCTAGATTTGGGGTCTATTTTATTTCACTGTTCTTCCCTGGTGGCTATGCTGTGTaGAGCCAAGATGCCTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: AACESARFGVYFISLFFPGGYAV*SQDASK Trigger: TTTGGAGGCATCTTGGCTGCACACAGCATAGCCACC...AGGGAAGAACAGTGAAATAAAATAGACCCCAAATCTAGCAGATTCACATGCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS-3UTR CCA 90 bp | TCATTTATTTTTGAGGACATACAGCAATTGACAAAAGCGGGATTGGATGTGGCATCCTCCCTTTGCTCCTaGTCAAACAGGGTCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SFIFEDIQQLTKAGLDVASSLCS*SNRVRL Trigger: CAGCCTGACCCTGTTTGACCAGGAGCAAAGGGAGGA...TGCCACATCCAATCCCGCTTTTGTCAATTGCTGTATGTCCTCAAAAATAAATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS-3UTR TCA 90 bp | CTAGATTTGGGGTCTATTTTATTTCACTGTTCTTCCCTAAGTGCAGACACCTGCTCGTCATGTTGGAAGTaGCACCATAGTAAAGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: LDLGSILFHCSSLSADTCSSCWK*HHSKAG Trigger: CCCAGCTTTACTATGGTGTCACTTCCAACATGACGA...GCAGGTGTCTGCACTTAGGGAAGAACAGTGAAATAAAATAGACCCCAAATCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS-3UTR CCA 90 bp | ATGTGGCAGCATGTGAATCTGCTAGATTTGGGGTCTATTTTATTTCACTGTTCTACCAGTACTTCAGGGTaGTGGCTATGCTGTGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: MWQHVNLLDLGSILFHCSTSTSG*WLCCVQ Trigger: CTGCACACAGCATAGCCACCACCCTGAAGTACTGGT...AGAACAGTGAAATAAAATAGACCCCAAATCTAGCAGATTCACATGCTGCCACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS-3UTR TCA 90 bp | GCTAGATTTGGGGTCTATTTTATTTCACTGTTCTTCCCTAAGTGCAGACACCTGACCTTGACAGACTTGTaGGCGTTTTTCTCTATCAGG | + |
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Preference number: 4 (lower is better) Translates to: ARFGVYFISLFFPKCRHLTLTDL*AFFSIR Trigger: CCTGATAGAGAAAAACGCTCACAAGTCTGTCAAGGT...CAGGTGTCTGCACTTAGGGAAGAACAGTGAAATAAAATAGACCCCAAATCTAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| 3UTR CAA 72 bp | CGGGATTGGATGTGGCAGCATGTGAATCTGCTAGATTaGGGGTCTATTTTATTTCACTGTTCTTCCCTAAGT | + |
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Preference number: 4 (lower is better) Translates to: RDWMWQHVNLLD*GSILFHCSSLS Trigger: ACTTAGGGAAGAACAGTGAAATAAAATAGACCCCAAATCTAGCAGATTCACATGCTGCCACATCCAATCCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS-3UTR TCA 90 bp | TTGGGGTCTATTTTATTTCACTGTTCTTCCCTAAGTGCAGACACCTGCAGGTCTCGTAGTTATTTCCAGTaGTATTGCCCCAGATTATCA | + |
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Preference number: 4 (lower is better) Translates to: LGSILFHCSSLSADTCRSRSYFQ*YCPRLS Trigger: TGATAATCTGGGGCAATATCACTGGAAATAACTACG...AGACCTGCAGGTGTCTGCACTTAGGGAAGAACAGTGAAATAAAATAGACCCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS-3UTR GCA 90 bp | GCAGCATGTGAATCTGCTAGATTTGGGGTCTATTTTATTTCACTGTTCTTCCCTGTCTGCCAGAAGTTCTaGCTTAGCATAATATGGGCA | + |
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Preference number: 4 (lower is better) Translates to: AACESARFGVYFISLFFPVCQKF*LSIIWA Trigger: TGCCCATATTATGCTAAGGCAGAACTTCTGGCAGAC...AGGGAAGAACAGTGAAATAAAATAGACCCCAAATCTAGCAGATTCACATGCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS-3UTR GCA 90 bp | CTAAGTGCAGACACCTGCAGGTCTTTCTGTCTTTCCTTCATATTTGTTCTGGTTTGTTCTGTATGCGTCTaGATGTTCTCTTTAGCGATG | + |
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Preference number: 4 (lower is better) Translates to: LSADTCRSFCLSFIFVLVCSVCV*MFSLAM Trigger: CATCGCTAAAGAGAACATGCAGACGCATACAGAACA...AACCAGAACAAATATGAAGGAAAGACAGAAAGACCTGCAGGTGTCTGCACTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS-3UTR CCA 90 bp | GCAGCATGTGAATCTGCTAGATTTGGGGTCTATTTTATTTCACTGTTCTTCCCTTGCCTTAGCATAATATaGGCAGTTTGCTTTACCCGC | + |
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Preference number: 4 (lower is better) Translates to: AACESARFGVYFISLFFPCLSII*AVCFTR Trigger: GCGGGTAAAGCAAACTGCCCATATTATGCTAAGGCA...AGGGAAGAACAGTGAAATAAAATAGACCCCAAATCTAGCAGATTCACATGCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS-3UTR GCA 90 bp | TCTTCCCTAAGTGCAGACACCTGCAGGTCTTTCTGTCTTTCCTTCATATTTGTTCACTTGTCAGGATGTTaGGTGATCTTAAAAATCCGA | + |
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Preference number: 4 (lower is better) Translates to: SSLSADTCRSFCLSFIFVHLSGC*VILKIR Trigger: TCGGATTTTTAAGATCACGCAACATCCTGACAAGTG...AACAAATATGAAGGAAAGACAGAAAGACCTGCAGGTGTCTGCACTTAGGGAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS-3UTR CCA 90 bp | TCTTCCCTAAGTGCAGACACCTGCAGGTCTTTCTGTCTTTCCTTCATATTTGTTATTCTCAAATTTCACTaGCATAGAAAAGACGATCCC | + |
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Preference number: 4 (lower is better) Translates to: SSLSADTCRSFCLSFIFVILKFH*HRKDDP Trigger: GGGATCGTCTTTTCTATGCCAGTGAAATTTGAGAAT...AACAAATATGAAGGAAAGACAGAAAGACCTGCAGGTGTCTGCACTTAGGGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| 3UTR CAA 72 bp | GGTTTACATTCATTTATTTTTGAGGACATACAGCAATaGACAAAAGCGGGATTGGATGTGGCAGCATGTGAA | + |
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Preference number: 4 (lower is better) Translates to: GLHSFIFEDIQQ*TKAGLDVAACE Trigger: TTCACATGCTGCCACATCCAATCCCGCTTTTGTCAATTGCTGTATGTCCTCAAAAATAAATGAATGTAAACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS GCA 90 bp | CGTTTTTCTCTATCAGGTAGCCGTAGAGGCGGCACAGCGGCACCCTaGTCCGGAGGCAGCTCTCCAGGCTGTACACCTCTTCCTCTGTAC | + |
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Preference number: 5 (lower is better) Translates to: RFSLSGSRRGGTAAP*SGGSSPGCTPLPLY Trigger: GTACAGAGGAAGAGGTGTACAGCCTGGAGAGCTGCCTCCGGAGCAGGGTGCCGCTGTGCCGCCTCTACGGCTACCTGATAGAGAAAAACG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS TCA 90 bp | ACCTCTTCCTCTGTACTGTCATCCAGGATGATGATGACCTGGGCCTaGAGGAAGGCCTCCTTTACCGTGGTGCAGAAGGACACAGTGCGG | + |
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Preference number: 5 (lower is better) Translates to: TSSSVLSSRMMMTWA*RKASFTVVQKDTVR Trigger: CCGCACTGTGTCCTTCTGCACCACGGTAAAGGAGGCCTTCCTTCAGGCCCAGGTCATCATCATCCTGGATGACAGTACAGAGGAAGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS TCA 90 bp | CTGGCCTTCACTCATTACCCCCAAGGAAACAATCTCTCCAGGTGGTaGGCCATGATACCAGTACTTCAGGGTGGTGGCTATGCTGTGTGC | + |
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Preference number: 5 (lower is better) Translates to: LAFTHYPQGNNLSRW*AMIPVLQGGGYAVC Trigger: GCACACAGCATAGCCACCACCCTGAAGTACTGGTATCATGGCTCACCACCTGGAGAGATTGTTTCCTTGGGGGTAATGAGTGAAGGCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS GCA 90 bp | TCCTCCCTTTGCTCCTGGTCAAACAGGGTCAGGCTGATCTCTGTGTaGATCCCAAACACTTCCCCGCTTAGCAAGAGGGGAATTAAGTGG | + |
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Preference number: 5 (lower is better) Translates to: SSLCSWSNRVRLISV*IPNTSPLSKRGIKW Trigger: CCACTTAATTCCCCTCTTGCTAAGCGGGGAAGTGTTTGGGATGCACACAGAGATCAGCCTGACCCTGTTTGACCAGGAGCAAAGGGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS GCA 90 bp | AAGTCCTGGGTTTCCATCACTATGCTTCTGAGGCAGTCCTCCCTTTaGTCCTGGTCAAACAGGGTCAGGCTGATCTCTGTGTGCATCCCA | + |
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Preference number: 5 (lower is better) Translates to: KSWVSITMLLRQSSL*SWSNRVRLISVCIP Trigger: TGGGATGCACACAGAGATCAGCCTGACCCTGTTTGACCAGGAGCAAAGGGAGGACTGCCTCAGAAGCATAGTGATGGAAACCCAGGACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS GCA 90 bp | CTCCAGGTGGTGAGCCATGATACCAGTACTTCAGGGTGGTGGCTATaGTGTGTGCAGCCAAGATGCCTCCAAATTGTTTTCCAGTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: LQVVSHDTSTSGWWL*CVQPRCLQIVFQCC Trigger: GCAGCACTGGAAAACAATTTGGAGGCATCTTGGCTGCACACAGCATAGCCACCACCCTGAAGTACTGGTATCATGGCTCACCACCTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS CCA 90 bp | TGGGTTTCCATCACTATGCTTCTGAGGCAGTCCTCCCTTTGCTCCTaGTCAAACAGGGTCAGGCTGATCTCTGTGTGCATCCCAAACACT | + |
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Preference number: 5 (lower is better) Translates to: WVSITMLLRQSSLCS*SNRVRLISVCIPNT Trigger: AGTGTTTGGGATGCACACAGAGATCAGCCTGACCCTGTTTGACCAGGAGCAAAGGGAGGACTGCCTCAGAAGCATAGTGATGGAAACCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS CCA 90 bp | CCTCCACGATCCAGCAACTCTCTCCAGATAATGGGGGAGGTTCTGTaGTCCCACATATTCCTTTCACAAACATCTTCCACCCAATCCTCC | + |
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Preference number: 5 (lower is better) Translates to: PPRSSNSLQIMGEVL*SHIFLSQTSSTQSS Trigger: GGAGGATTGGGTGGAAGATGTTTGTGAAAGGAATATGTGGGACCACAGAACCTCCCCCATTATCTGGAGAGAGTTGCTGGATCGTGGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS-3UTR CAA 90 bp | CTAGATTTGGGGTCTATTTTATTTCACTGTTCTTCCCTAAGTGCAGACACCTGCGAGGCAGTCCTCCCTTaGCTCCTGGTCAAACAGGGT | + |
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Preference number: 5 (lower is better) Translates to: LDLGSILFHCSSLSADTCEAVLP*LLVKQG Trigger: ACCCTGTTTGACCAGGAGCAAAGGGAGGACTGCCTC...GCAGGTGTCTGCACTTAGGGAAGAACAGTGAAATAAAATAGACCCCAAATCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS-3UTR CAA 90 bp | CAGCATGTGAATCTGCTAGATTTGGGGTCTATTTTATTTCACTGTTCTTCCCTACAGTACTGCTTTTGCTaGGCCTTCTACCCCCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: QHVNLLDLGSILFHCSSLQYCFC*AFYPQS Trigger: GCTCTGGGGGTAGAAGGCCAAGCAAAAGCAGTACTG...TAGGGAAGAACAGTGAAATAAAATAGACCCCAAATCTAGCAGATTCACATGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS-3UTR CAA 90 bp | GATTTGGGGTCTATTTTATTTCACTGTTCTTCCCTAAGTGCAGACACCTGCAGGCATAATATGGGCAGTTaGCTTTACCCGCGATCACAA | + |
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Preference number: 5 (lower is better) Translates to: DLGSILFHCSSLSADTCRHNMGS*LYPRSQ Trigger: TTGTGATCGCGGGTAAAGCAAACTGCCCATATTATG...CCTGCAGGTGTCTGCACTTAGGGAAGAACAGTGAAATAAAATAGACCCCAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS-3UTR CAA 90 bp | TCACTGTTCTTCCCTAAGTGCAGACACCTGCAGGTCTTTCTGTCTTTCCTTCATTGTTCCAGAAACTCATaGTATCCTCCCAAAAGCAAG | + |
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Preference number: 5 (lower is better) Translates to: SLFFPKCRHLQVFLSFLHCSRNS*YPPKSK Trigger: CTTGCTTTTGGGAGGATACAATGAGTTTCTGGAACA...ATGAAGGAAAGACAGAAAGACCTGCAGGTGTCTGCACTTAGGGAAGAACAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS CCA 90 bp | TTCAAGATCAGTAAGAACCACCCACGTTCCATTCTCAAATTTCACTaGCATAGAAAAGACGATCCCTTCAGGAATGTCAAACTGGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: FKISKNHPRSILKFH*HRKDDPFRNVKLAF Trigger: GAAGGCCAGTTTGACATTCCTGAAGGGATCGTCTTTTCTATGCCAGTGAAATTTGAGAATGGAACGTGGGTGGTTCTTACTGATCTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS GCA 90 bp | AGATCTTTCATGGTTTCTTTATCCAACTGTTGTTCTGTATGCGTCTaGATGTTCTCTTTAGCGATGACCATCATCAACTCCGTCGTCATG | + |
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Preference number: 5 (lower is better) Translates to: RSFMVSLSNCCSVCV*MFSLAMTIINSVVM Trigger: CATGACGACGGAGTTGATGATGGTCATCGCTAAAGAGAACATGCAGACGCATACAGAACAACAGTTGGATAAAGAAACCATGAAAGATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS-3UTR CAA 90 bp | GATTTGGGGTCTATTTTATTTCACTGTTCTTCCCTAAGTGCAGACACCTGCAGGGATGTTAGGGGCATATaGCATGAGCAAAGTTGTTTT | + |
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Preference number: 5 (lower is better) Translates to: DLGSILFHCSSLSADTCRDVRGI*HEQSCF Trigger: AAAACAACTTTGCTCATGCAATATGCCCCTAACATC...CCTGCAGGTGTCTGCACTTAGGGAAGAACAGTGAAATAAAATAGACCCCAAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS-3UTR CAA 90 bp | GCAGCATGTGAATCTGCTAGATTTGGGGTCTATTTTATTTCACTGTTCTTCCCTCAAGATGCCTCCAAATaGTTTTCCAGTGCTGCTCAA | + |
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Preference number: 5 (lower is better) Translates to: AACESARFGVYFISLFFPQDASK*FSSAAQ Trigger: TTGAGCAGCACTGGAAAACAATTTGGAGGCATCTTG...AGGGAAGAACAGTGAAATAAAATAGACCCCAAATCTAGCAGATTCACATGCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS-3UTR CAA 90 bp | TTCTTCCCTAAGTGCAGACACCTGCAGGTCTTTCTGTCTTTCCTTCATATTTGTCAGATTATCACATCTTaGATGTTGGCTGAAGTGGTT | + |
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Preference number: 5 (lower is better) Translates to: FFPKCRHLQVFLSFLHICQIITS*MLAEVV Trigger: AACCACTTCAGCCAACATCAAAGATGTGATAATCTG...ACAAATATGAAGGAAAGACAGAAAGACCTGCAGGTGTCTGCACTTAGGGAAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS-3UTR CAA 90 bp | CCTAAGTGCAGACACCTGCAGGTCTTTCTGTCTTTCCTTCATATTTGTTCTGGTCATAGTTGTAAACTTTaGCTTTCCTCAGATCAACGT | + |
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Preference number: 5 (lower is better) Translates to: PKCRHLQVFLSFLHICSGHSCKL*LSSDQR Trigger: ACGTTGATCTGAGGAAAGCAAAAGTTTACAACTATG...ACCAGAACAAATATGAAGGAAAGACAGAAAGACCTGCAGGTGTCTGCACTTAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS GCA 90 bp | CTTTCACAAACATCTTCCACCCAATCCTCCCACTTGTCAGGATGTTaGGTGATCTTAAAAATCCGAAAGTCAGGAAGATTCTTTTGTAAA | + |
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Preference number: 5 (lower is better) Translates to: LSQTSSTQSSHLSGC*VILKIRKSGRFFCK Trigger: TTTACAAAAGAATCTTCCTGACTTTCGGATTTTTAAGATCACGCAACATCCTGACAAGTGGGAGGATTGGGTGGAAGATGTTTGTGAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS GCA 72 bp | CTATCAGGTAGCCGTAGAGGCGGCACAGCGGCACCCTaGTCCGGAGGCAGCTCTCCAGGCTGTACACCTCTT | + |
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Preference number: 6 (lower is better) Translates to: LSGSRRGGTAAP*SGGSSPGCTPL Trigger: AAGAGGTGTACAGCCTGGAGAGCTGCCTCCGGAGCAGGGTGCCGCTGTGCCGCCTCTACGGCTACCTGATAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS CCA 72 bp | AAGGACACAGTGCGGAGCACTGGTGAGGCCAAGTCCTaGGTTTCCATCACTATGCTTCTGAGGCAGTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: KDTVRSTGEAKS*VSITMLLRQSS Trigger: GGAGGACTGCCTCAGAAGCATAGTGATGGAAACCCAGGACTTGGCCTCACCAGTGCTCCGCACTGTGTCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS TCA 72 bp | GTGAGGCCAAGTCCTGGGTTTCCATCACTATGCTTCTaGGGCAGTCCTCCCTTTGCTCCTGGTCAAACAGGG | + |
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Preference number: 6 (lower is better) Translates to: VRPSPGFPSLCF*GSPPFAPGQTG Trigger: CCCTGTTTGACCAGGAGCAAAGGGAGGACTGCCTCAGAAGCATAGTGATGGAAACCCAGGACTTGGCCTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS TCA 72 bp | TACCGTGGTGCAGAAGGACACAGTGCGGAGCACTGGTaGGGCCAAGTCCTGGGTTTCCATCACTATGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: YRGAEGHSAEHW*GQVLGFHHYAS Trigger: AGAAGCATAGTGATGGAAACCCAGGACTTGGCCTCACCAGTGCTCCGCACTGTGTCCTTCTGCACCACGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS GCA 72 bp | TGCTCCTGGTCAAACAGGGTCAGGCTGATCTCTGTGTaGATCCCAAACACTTCCCCGCTTAGCAAGAGGGGA | + |
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Preference number: 6 (lower is better) Translates to: CSWSNRVRLISV*IPNTSPLSKRG Trigger: TCCCCTCTTGCTAAGCGGGGAAGTGTTTGGGATGCACACAGAGATCAGCCTGACCCTGTTTGACCAGGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS CCA 72 bp | CTCCAGGTGGTGAGCCATGATACCAGTACTTCAGGGTaGTGGCTATGCTGTGTGCAGCCAAGATGCCTCCAA | + |
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Preference number: 6 (lower is better) Translates to: LQVVSHDTSTSG*WLCCVQPRCLQ Trigger: TTGGAGGCATCTTGGCTGCACACAGCATAGCCACCACCCTGAAGTACTGGTATCATGGCTCACCACCTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS TCA 72 bp | ACCCCCAAGGAAACAATCTCTCCAGGTGGTGAGCCATaGTACCAGTACTTCAGGGTGGTGGCTATGCTGTGT | + |
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Preference number: 6 (lower is better) Translates to: TPKETISPGGEP*YQYFRVVAMLC Trigger: ACACAGCATAGCCACCACCCTGAAGTACTGGTATCATGGCTCACCACCTGGAGAGATTGTTTCCTTGGGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS GCA 72 bp | GTTTCCATCACTATGCTTCTGAGGCAGTCCTCCCTTTaGTCCTGGTCAAACAGGGTCAGGCTGATCTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: VSITMLLRQSSL*SWSNRVRLISV Trigger: CACAGAGATCAGCCTGACCCTGTTTGACCAGGAGCAAAGGGAGGACTGCCTCAGAAGCATAGTGATGGAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS CCA 72 bp | ATCACTATGCTTCTGAGGCAGTCCTCCCTTTGCTCCTaGTCAAACAGGGTCAGGCTGATCTCTGTGTGCATC | + |
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Preference number: 6 (lower is better) Translates to: ITMLLRQSSLCS*SNRVRLISVCI Trigger: GATGCACACAGAGATCAGCCTGACCCTGTTTGACCAGGAGCAAAGGGAGGACTGCCTCAGAAGCATAGTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS CAA 72 bp | GCTTGGCCTTCTACCCCCAGAGCCACTGCGATAATGTaGCTCGCGATGTTAGGGGCATATTGCATGAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: AWPSTPRATAIM*LAMLGAYCMSK Trigger: TTTGCTCATGCAATATGCCCCTAACATCGCGAGCAACATTATCGCAGTGGCTCTGGGGGTAGAAGGCCAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS TCA 72 bp | ACTCATTACCCCCAAGGAAACAATCTCTCCAGGTGGTaGGCCATGATACCAGTACTTCAGGGTGGTGGCTAT | + |
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Preference number: 6 (lower is better) Translates to: THYPQGNNLSRW*AMIPVLQGGGY Trigger: ATAGCCACCACCCTGAAGTACTGGTATCATGGCTCACCACCTGGAGAGATTGTTTCCTTGGGGGTAATGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS GCA 72 bp | GTGAGCCATGATACCAGTACTTCAGGGTGGTGGCTATaGTGTGTGCAGCCAAGATGCCTCCAAATTGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: VSHDTSTSGWWL*CVQPRCLQIVF Trigger: GAAAACAATTTGGAGGCATCTTGGCTGCACACAGCATAGCCACCACCCTGAAGTACTGGTATCATGGCTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS CCA 72 bp | TCCAGCAACTCTCTCCAGATAATGGGGGAGGTTCTGTaGTCCCACATATTCCTTTCACAAACATCTTCCACC | + |
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Preference number: 6 (lower is better) Translates to: SSNSLQIMGEVL*SHIFLSQTSST Trigger: GGTGGAAGATGTTTGTGAAAGGAATATGTGGGACCACAGAACCTCCCCCATTATCTGGAGAGAGTTGCTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS CCA 72 bp | GGCATAGAAAAGACGATCCCTTCAGGAATGTCAAACTaGCCTTCACTCATTACCCCCAAGGAAACAATCTCT | + |
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Preference number: 6 (lower is better) Translates to: GIEKTIPSGMSN*PSLITPKETIS Trigger: AGAGATTGTTTCCTTGGGGGTAATGAGTGAAGGCCAGTTTGACATTCCTGAAGGGATCGTCTTTTCTATGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS CAA 72 bp | CCAGTGATATTGCCCCAGATTATCACATCTTTGATGTaGGCTGAAGTGGTTTTCATCTTTCGGGCCAGTACT | + |
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Preference number: 6 (lower is better) Translates to: PVILPQIITSLM*AEVVFIFRAST Trigger: AGTACTGGCCCGAAAGATGAAAACCACTTCAGCCAACATCAAAGATGTGATAATCTGGGGCAATATCACTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS TCA 72 bp | GATATTGCCCCAGATTATCACATCTTTGATGTTGGCTaGAGTGGTTTTCATCTTTCGGGCCAGTACTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: DIAPDYHIFDVG*SGFHLSGQYCF Trigger: AAAGCAGTACTGGCCCGAAAGATGAAAACCACTTCAGCCAACATCAAAGATGTGATAATCTGGGGCAATATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS TCA 72 bp | AAAGTTAATAAGTCTCCACATGCAACAAGTTTCTCCTaGATCAGATCGCCTGTGAGCCTGCTTAGTGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: KVNKSPHATSFS*IRSPVSLLSVF Trigger: GAAGACACTAAGCAGGCTCACAGGCGATCTGATTCAGGAGAAACTTGTTGCATGTGGAGACTTATTAACTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS CAA 72 bp | AACATCTTCCACCCAATCCTCCCACTTGTCAGGATGTaGCGTGATCTTAAAAATCCGAAAGTCAGGAAGATT | + |
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Preference number: 6 (lower is better) Translates to: NIFHPILPLVRM*RDLKNPKVRKI Trigger: AATCTTCCTGACTTTCGGATTTTTAAGATCACGCAACATCCTGACAAGTGGGAGGATTGGGTGGAAGATGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS CAA 72 bp | TTCCTTTCACAAACATCTTCCACCCAATCCTCCCACTaGTCAGGATGTTGCGTGATCTTAAAAATCCGAAAG | + |
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Preference number: 6 (lower is better) Translates to: FLSQTSSTQSSH*SGCCVILKIRK Trigger: CTTTCGGATTTTTAAGATCACGCAACATCCTGACAAGTGGGAGGATTGGGTGGAAGATGTTTGTGAAAGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS CAA 90 bp | CTGCAAAGGGCTGATGAGATCTTTCATGGTTTCTTTATCCAACTGTaGTTCTGTATGCGTCTGCATGTTCTCTTTAGCGATGACCATCAT | + |
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Preference number: 6 (lower is better) Translates to: LQRADEIFHGFFIQL*FCMRLHVLFSDDHH Trigger: ATGATGGTCATCGCTAAAGAGAACATGCAGACGCATACAGAACAACAGTTGGATAAAGAAACCATGAAAGATCTCATCAGCCCTTTGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS GCA 72 bp | ATGGTTTCTTTATCCAACTGTTGTTCTGTATGCGTCTaGATGTTCTCTTTAGCGATGACCATCATCAACTCC | + |
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Preference number: 6 (lower is better) Translates to: MVSLSNCCSVCV*MFSLAMTIINS Trigger: GGAGTTGATGATGGTCATCGCTAAAGAGAACATGCAGACGCATACAGAACAACAGTTGGATAAAGAAACCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS GCA 72 bp | AGGCCCCTTGACAGCACTCTCATAGTTGTAAACTTTTaGTTTCCTCAGATCAACGTAGTTATTTCCAGTGAT | + |
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Preference number: 6 (lower is better) Translates to: RPLDSTLIVVNF*FPQINVVISSD Trigger: ATCACTGGAAATAACTACGTTGATCTGAGGAAAGCAAAAGTTTACAACTATGAGAGTGCTGTCAAGGGGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS CCA 72 bp | AGTAAGAACCACCCACGTTCCATTCTCAAATTTCACTaGCATAGAAAAGACGATCCCTTCAGGAATGTCAAA | + |
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Preference number: 6 (lower is better) Translates to: SKNHPRSILKFH*HRKDDPFRNVK Trigger: TTTGACATTCCTGAAGGGATCGTCTTTTCTATGCCAGTGAAATTTGAGAATGGAACGTGGGTGGTTCTTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS CAA 72 bp | GCTGATGAGATCTTTCATGGTTTCTTTATCCAACTGTaGTTCTGTATGCGTCTGCATGTTCTCTTTAGCGAT | + |
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Preference number: 6 (lower is better) Translates to: ADEIFHGFFIQL*FCMRLHVLFSD Trigger: ATCGCTAAAGAGAACATGCAGACGCATACAGAACAACAGTTGGATAAAGAAACCATGAAAGATCTCATCAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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| CDS GCA 72 bp | ACTGCGATAATGTTGCTCGCGATGTTAGGGGCATATTaGATGAGCAAAGTTGTTTTCAGATTTACAAAGTTT | + |
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Preference number: 6 (lower is better) Translates to: TAIMLLAMLGAY*MSKVVFRFTKF Trigger: AAACTTTGTAAATCTGAAAACAACTTTGCTCATGCAATATGCCCCTAACATCGCGAGCAACATTATCGCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114094.3 |
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