Pregenerated sensors for MDGA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034912Ensembl transcript IDs: ENSMUST00000037181.16, ENSMUST00000101379.10, ENSMUST00000178814.9, ENSMUST00000222623.2, ENSMUST00000222987.2, ENSMUST00000223141.2
Found 356 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTCTCAGGACCCTACAGCTCATGGTCACACTTCTGTCCTGTCCTTaGCGGATTTCCAAGAATGCTGGTTCCACAGCTGGGGGATACTGC | + |
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Preference number: 1 (lower is better) Translates to: ALRTLQLMVTLLSCP*RISKNAGSTAGGYC Trigger: GCAGTATCCCCCAGCTGTGGAACCAGCATTCTTGGAAATCCGTCAAGGACAGGACAGAAGTGTGACCATGAGCTGTAGGGTCCTGAGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
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| 3UTR TCA 90 bp | GGGAGCACAGAACTGGGGTGGGTGGCTGTATGCTGGAAATGCAGGTaGATGCAGATCTTTCCCATGCTAAGTGCCCAGTTATCACCTGCT | + |
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Preference number: 1 (lower is better) Translates to: GSTELGWVAVCWKCR*MQIFPMLSAQLSPA Trigger: AGCAGGTGATAACTGGGCACTTAGCATGGGAAAGATCTGCATTCACCTGCATTTCCAGCATACAGCCACCCACCCCAGTTCTGTGCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
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| 3UTR CCA 90 bp | CATGGTCACACTTCTGTCCTGTCCTTGACGGATTTCCAAGAATGCTaGTTCCACAGCTGGGGGATACTGCACAATGAGCTGCACCAAGGC | + |
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Preference number: 1 (lower is better) Translates to: HGHTSVLSLTDFQEC*FHSWGILHNELHQG Trigger: GCCTTGGTGCAGCTCATTGTGCAGTATCCCCCAGCTGTGGAACCAGCATTCTTGGAAATCCGTCAAGGACAGGACAGAAGTGTGACCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
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| 3UTR GCA 90 bp | GCTCATGGTCACACTTCTGTCCTGTCCTTGACGGATTTCCAAGAATaGTGGTTCCACAGCTGGGGGATACTGCACAATGAGCTGCACCAA | + |
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Preference number: 1 (lower is better) Translates to: AHGHTSVLSLTDFQE*WFHSWGILHNELHQ Trigger: TTGGTGCAGCTCATTGTGCAGTATCCCCCAGCTGTGGAACCAGCATTCTTGGAAATCCGTCAAGGACAGGACAGAAGTGTGACCATGAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
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| 3UTR CCA 90 bp | CACAGCTGGGGGATACTGCACAATGAGCTGCACCAAGGCTTCTCTTaGCTTCACGTTGAATCCATTGTACTGGCTGGTCTGGCATCTGTA | + |
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Preference number: 1 (lower is better) Translates to: HSWGILHNELHQGFS*LHVESIVLAGLASV Trigger: TACAGATGCCAGACCAGCCAGTACAATGGATTCAACGTGAAGCCAAGAGAAGCCTTGGTGCAGCTCATTGTGCAGTATCCCCCAGCTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
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| 3UTR GCA 90 bp | CTGTATACTCCTGAGAGTCAAACTGTCCGGTCCGTAATAATTTATTaGCCAGACGCCACTCATAGGTCAGCACTCGTATTGGATAGGCTC | + |
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Preference number: 1 (lower is better) Translates to: LYTPESQTVRSVIIY*PDATHRSALVLDRL Trigger: GAGCCTATCCAATACGAGTGCTGACCTATGAGTGGCGTCTGGGCAATAAATTATTACGGACCGGACAGTTTGACTCTCAGGAGTATACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
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| 3UTR CCA 90 bp | AGCTGCACCAAGGCTTCTCTTGGCTTCACGTTGAATCCATTGTACTaGCTGGTCTGGCATCTGTACATTCCTGACATTTCCCTTGAAACA | + |
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Preference number: 1 (lower is better) Translates to: SCTKASLGFTLNPLY*LVWHLYIPDISLET Trigger: TGTTTCAAGGGAAATGTCAGGAATGTACAGATGCCAGACCAGCCAGTACAATGGATTCAACGTGAAGCCAAGAGAAGCCTTGGTGCAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
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| 3UTR TCA 90 bp | ATCATCCAAGTAGTACACATCCACTCGGATCGACTTTATTGCTGGTaGCCCCAAGCCATTCTCTGCTTTACAGTAATATCGGCCTCCTTG | + |
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Preference number: 1 (lower is better) Translates to: IIQVVHIHSDRLYCW*PQAILCFTVISASL Trigger: CAAGGAGGCCGATATTACTGTAAAGCAGAGAATGGCTTGGGGTCACCAGCAATAAAGTCGATCCGAGTGGATGTGTACTACTTGGATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
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| 3UTR TCA 90 bp | CCCAGTTGCAAGAAGAGTGTACCTTCTGCTTTGTTGAGACACAGCTaGAACCGTGGAAGTAGTCAGCAACTAGAATATATTTGGGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: PSCKKSVPSALLRHS*NRGSSQQLEYIWGR Trigger: CCTTCCCCAAATATATTCTAGTTGCTGACTACTTCCACGGTTTCAGCTGTGTCTCAACAAAGCAGAAGGTACACTCTTCTTGCAACTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
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| 3UTR GCA 90 bp | GGACCCGTGTTAGGGGTGTATTTTGTGTTCCTTGTTGCAGTGCTTTaGTTTGTCCAGTCAAAGTTATCCGTATCGTCTTGGGTGAACAAA | + |
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Preference number: 1 (lower is better) Translates to: GPVLGVYFVFLVAVL*FVQSKLSVSSWVNK Trigger: TTTGTTCACCCAAGACGATACGGATAACTTTGACTGGACAAAGCAAAGCACTGCAACAAGGAACACAAAATACACCCCTAACACGGGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
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| 3UTR TCA 90 bp | TTGACACTGAAGTTCTATTGTGTCTCCTTCTCTGGTGACCAAAGGTaGTTTTTCCTGTGGAACAGTCAGATTGGGTGGAACTGTACTGCT | + |
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Preference number: 1 (lower is better) Translates to: LTLKFYCVSFSGDQR*FFLWNSQIGWNCTA Trigger: AGCAGTACAGTTCCACCCAATCTGACTGTTCCACAGGAAAAATCACCTTTGGTCACCAGAGAAGGAGACACAATAGAACTTCAGTGTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
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| 3UTR CCA 90 bp | AAAAGATGGTGGTTTGGTTTCTTCATAGGAACAGATGACGTAGTTTaGGTGTCAAGTGGCCGCAAGCAAACTCCGATAAGCCTGTGTAAT | + |
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Preference number: 1 (lower is better) Translates to: KRWWFGFFIGTDDVV*VSSGRKQTPISLCN Trigger: ATTACACAGGCTTATCGGAGTTTGCTTGCGGCCACTTGACACCCAAACTACGTCATCTGTTCCTATGAAGAAACCAAACCACCATCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
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| 3UTR CCA 90 bp | AAGGCTTCTCTTGGCTTCACGTTGAATCCATTGTACTGGCTGGTCTaGCATCTGTACATTCCTGACATTTCCCTTGAAACATTCACAATC | + |
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Preference number: 1 (lower is better) Translates to: KASLGFTLNPLYWLV*HLYIPDISLETFTI Trigger: GATTGTGAATGTTTCAAGGGAAATGTCAGGAATGTACAGATGCCAGACCAGCCAGTACAATGGATTCAACGTGAAGCCAAGAGAAGCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
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| 3UTR CCA 90 bp | GGTCTTGTTTTGCACATTCTCCTTCAGCAATTGATACATCATCAATaGCGATGTCACCCTCTATCCCAGGACCTCGAATGCCTTCAAAAA | + |
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Preference number: 1 (lower is better) Translates to: GLVLHILLQQLIHHQ*RCHPLSQDLECLQK Trigger: TTTTTGAAGGCATTCGAGGTCCTGGGATAGAGGGTGACATCGCCATTGATGATGTATCAATTGCTGAAGGAGAATGTGCAAAACAAGACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
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| 3UTR GCA 90 bp | TTTGTCACATCTGACAGTACTCAAGTCCTCTCAGCTCTGTGTGCATaGTCCATATCACTACATGACAGTGCTGCTAATTGCAATGAAAAC | + |
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Preference number: 1 (lower is better) Translates to: FVTSDSTQVLSALCA*SISLHDSAANCNEN Trigger: GTTTTCATTGCAATTAGCAGCACTGTCATGTAGTGATATGGAGCATGCACACAGAGCTGAGAGGACTTGAGTACTGTCAGATGTGACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
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| 3UTR GCA 90 bp | CAGGGTCCCATCATAACTTTCCATTTGCATTGTCCCATCAGGCATTaGAACTTCTTTATCTGCTCTAGACCAAAGGATGATTGGTTTTGG | + |
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Preference number: 1 (lower is better) Translates to: QGPIITFHLHCPIRH*NFFICSRPKDDWFW Trigger: CCAAAACCAATCATCCTTTGGTCTAGAGCAGATAAAGAAGTTGCAATGCCTGATGGGACAATGCAAATGGAAAGTTATGATGGGACCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
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| 3UTR TCA 90 bp | CATTATTATTGGCAATGCAGCTGTAAGTACCAGCGTCATCAGAGGTaGTGGCAGGTATGGTCAATGTCCCTCCATTCAAAACAATCTTTT | + |
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Preference number: 1 (lower is better) Translates to: HYYWQCSCKYQRHQR*WQVWSMSLHSKQSF Trigger: AAAAGATTGTTTTGAATGGAGGGACATTGACCATACCTGCCATCACCTCTGATGACGCTGGTACTTACAGCTGCATTGCCAATAATAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
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| 3UTR TCA 90 bp | TCTAAACGACACCATCTTGTCTGGAATATTACACACGTTCCTTACTaGAGCAATGCAGCTGTAGTTAGCATAATCTTGAGGGCGAAGATT | + |
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Preference number: 1 (lower is better) Translates to: SKRHHLVWNITHVPY*SNAAVVSIILRAKI Trigger: AATCTTCGCCCTCAAGATTATGCTAACTACAGCTGCATTGCTTCAGTAAGGAACGTGTGTAATATTCCAGACAAGATGGTGTCGTTTAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
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| 3UTR TCA 90 bp | GGGCTTAAGATAGAGATGAGGATGATAACTGGAAAAAGCCATATATaGACTAAGATCCCAACAGCACCATCCACGGAATTCTTAGTTGGT | + |
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Preference number: 1 (lower is better) Translates to: GLKIEMRMITGKSHI*TKIPTAPSTEFLVG Trigger: ACCAACTAAGAATTCCGTGGATGGTGCTGTTGGGATCTTAGTTCATATATGGCTTTTTCCAGTTATCATCCTCATCTCTATCTTAAGCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
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| 3UTR GCA 90 bp | ACTTTCCATTTGCATTGTCCCATCAGGCATTGCAACTTCTTTATCTaGTCTAGACCAAAGGATGATTGGTTTTGGTTTCCCAGTTACTTG | + |
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Preference number: 1 (lower is better) Translates to: TFHLHCPIRHCNFFI*SRPKDDWFWFPSYL Trigger: CAAGTAACTGGGAAACCAAAACCAATCATCCTTTGGTCTAGAGCAGATAAAGAAGTTGCAATGCCTGATGGGACAATGCAAATGGAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
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| 3UTR CCA 90 bp | GTGATAGAAGAAACTGAAACAATATGCACTATTTGTAGGTCCATATaGATTTTTGGGAGCTATGCTGAATACAGGGCTGAGAAGTCGAGC | + |
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Preference number: 1 (lower is better) Translates to: VIEETETICTICRSI*IFGSYAEYRAEKSS Trigger: GCTCGACTTCTCAGCCCTGTATTCAGCATAGCTCCCAAAAATCCATATGGACCTACAAATAGTGCATATTGTTTCAGTTTCTTCTATCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
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| 3UTR CCA 90 bp | CATTGCAACTTCTTTATCTGCTCTAGACCAAAGGATGATTGGTTTTaGTTTCCCAGTTACTTGACACTGAAGTTCTATTGTGTCTCCTTC | + |
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Preference number: 1 (lower is better) Translates to: HCNFFICSRPKDDWF*FPSYLTLKFYCVSF Trigger: GAAGGAGACACAATAGAACTTCAGTGTCAAGTAACTGGGAAACCAAAACCAATCATCCTTTGGTCTAGAGCAGATAAAGAAGTTGCAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
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| 3UTR CCA 90 bp | ATCAGGCATTGCAACTTCTTTATCTGCTCTAGACCAAAGGATGATTaGTTTTGGTTTCCCAGTTACTTGACACTGAAGTTCTATTGTGTC | + |
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Preference number: 1 (lower is better) Translates to: IRHCNFFICSRPKDD*FWFPSYLTLKFYCV Trigger: GACACAATAGAACTTCAGTGTCAAGTAACTGGGAAACCAAAACCAATCATCCTTTGGTCTAGAGCAGATAAAGAAGTTGCAATGCCTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
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| 3UTR TCA 90 bp | TTTAACTTTCAAGGAAAGATCATATTTAGTCTTGTTTGTCACATCTaGCAGTACTCAAGTCCTCTCAGCTCTGTGTGCATGCTCCATATC | + |
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Preference number: 1 (lower is better) Translates to: FNFQGKIIFSLVCHI*QYSSPLSSVCMLHI Trigger: GATATGGAGCATGCACACAGAGCTGAGAGGACTTGAGTACTGTCAGATGTGACAAACAAGACTAAATATGATCTTTCCTTGAAAGTTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
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| 3UTR CCA 90 bp | AAATTGTTCTTTAGCTTCACCTATACTTTGATGAACAGTTACTACTaGATCATCCAAGTAGTACACATCCACTCGGATCGACTTTATTGC | + |
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Preference number: 1 (lower is better) Translates to: KLFFSFTYTLMNSYY*IIQVVHIHSDRLYC Trigger: GCAATAAAGTCGATCCGAGTGGATGTGTACTACTTGGATGATCCAGTAGTAACTGTTCATCAAAGTATAGGTGAAGCTAAAGAACAATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
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| 3UTR CCA 90 bp | TTCACCAAATTTAGTGAGAGGAGTCAATCGGACTTCATAGGCCTCTaGTTTAATAAGTTCAGTCAAGTTATATGTAATCAGTTCTCCTTT | + |
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Preference number: 1 (lower is better) Translates to: FTKFSERSQSDFIGL*FNKFSQVICNQFSF Trigger: AAAGGAGAACTGATTACATATAACTTGACTGAACTTATTAAACCAGAGGCCTATGAAGTCCGATTGACTCCTCTCACTAAATTTGGTGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
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| 3UTR TCA 90 bp | TTCCATGGTAACAAGCAAACTATTCATTTGAAACAAAACCAGCCATaGCTTTGTGCTTTGACGAGGATTTCTATAGCTCTTTTTCTTCTT | + |
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Preference number: 1 (lower is better) Translates to: FHGNKQTIHLKQNQP*LCALTRISIALFLL Trigger: AAGAAGAAAAAGAGCTATAGAAATCCTCGTCAAAGCACAAAGTCATGGCTGGTTTTGTTTCAAATGAATAGTTTGCTTGTTACCATGGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
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| 3UTR CAA 90 bp | GGCTCTCAGGACCCTACAGCTCATGGTCACACTTCTGTCCTGTCCTaGACGGATTTCCAAGAATGCTGGTTCCACAGCTGGGGGATACTG | + |
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Preference number: 2 (lower is better) Translates to: GSQDPTAHGHTSVLS*TDFQECWFHSWGIL Trigger: CAGTATCCCCCAGCTGTGGAACCAGCATTCTTGGAAATCCGTCAAGGACAGGACAGAAGTGTGACCATGAGCTGTAGGGTCCTGAGAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
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| 3UTR-3UTR TCA 90 bp | GTCCTTTGTTCCCACTCGACGACCATAGCGGATTCTCTATCGTTGTCTGCCCTTCAGCGTCATCAGAGGTaGTGGCAGGTATGGTCAATG | + |
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Preference number: 2 (lower is better) Translates to: VLCSHSTTIADSLSLSALQRHQR*WQVWSM Trigger: CATTGACCATACCTGCCATCACCTCTGATGACGCTG...AAGGGCAGACAACGATAGAGAATCCGCTATGGTCGTCGAGTGGGAACAAAGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
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| 3UTR-3UTR CCA 90 bp | GTCCTTTGTTCCCACTCGACGACCATAGCGGATTCTCTATCGTTGTCTGCCCTTGGTCAGCACTCGTATTaGATAGGCTCTCAGGACCCT | + |
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Preference number: 2 (lower is better) Translates to: VLCSHSTTIADSLSLSALGQHSY*IGSQDP Trigger: AGGGTCCTGAGAGCCTATCCAATACGAGTGCTGACC...AAGGGCAGACAACGATAGAGAATCCGCTATGGTCGTCGAGTGGGAACAAAGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
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| 3UTR-3UTR TCA 90 bp | AGGAAAGCCCGGAATCCCAGGGCAACAATGAAGAGCCATACGAAGACAAGCAAAGTCTGCTTTCCCCTCTaGTTGCCCCTTGTTCTTCAC | + |
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Preference number: 2 (lower is better) Translates to: RKARNPRATMKSHTKTSKVCFPL*LPLVLH Trigger: GTGAAGAACAAGGGGCAATCAGAGGGGAAAGCAGAC...TTTGCTTGTCTTCGTATGGCTCTTCATTGTTGCCCTGGGATTCCGGGCTTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
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| 3UTR CAA 90 bp | GGATACTGCACAATGAGCTGCACCAAGGCTTCTCTTGGCTTCACGTaGAATCCATTGTACTGGCTGGTCTGGCATCTGTACATTCCTGAC | + |
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Preference number: 2 (lower is better) Translates to: GYCTMSCTKASLGFT*NPLYWLVWHLYIPD Trigger: GTCAGGAATGTACAGATGCCAGACCAGCCAGTACAATGGATTCAACGTGAAGCCAAGAGAAGCCTTGGTGCAGCTCATTGTGCAGTATCC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
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| 3UTR-3UTR CCA 90 bp | AGGAAAGCCCGGAATCCCAGGGCAACAATGAAGAGCCATACGAAGACAAGCAAAAGTTTGGGTGTCAAGTaGCCGCAAGCAAACTCCGAT | + |
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Preference number: 2 (lower is better) Translates to: RKARNPRATMKSHTKTSKSLGVK*PQANSD Trigger: ATCGGAGTTTGCTTGCGGCCACTTGACACCCAAACT...TTTGCTTGTCTTCGTATGGCTCTTCATTGTTGCCCTGGGATTCCGGGCTTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
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| 3UTR-3UTR CCA 90 bp | GCGAGAAATTCAGTTTCTCACCACCTCGCTAGTCTGTCTGCTTTCCCCTCTGATACAGATGACGTAGTTTaGGTGTCAAGTGGCCGCAAG | + |
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Preference number: 2 (lower is better) Translates to: ARNSVSHHLASLSAFPSDTDDVV*VSSGRK Trigger: CTTGCGGCCACTTGACACCCAAACTACGTCATCTGT...ATCAGAGGGGAAAGCAGACAGACTAGCGAGGTGGTGAGAAACTGAATTTCTCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
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| 3UTR-3UTR CCA 90 bp | GTCCTTTGTTCCCACTCGACGACCATAGCGGATTCTCTATCGTTGTCTGCCCTTGATTTCCAAGAATGCTaGTTCCACAGCTGGGGGATA | + |
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Preference number: 2 (lower is better) Translates to: VLCSHSTTIADSLSLSALDFQEC*FHSWGI Trigger: TATCCCCCAGCTGTGGAACCAGCATTCTTGGAAATC...AAGGGCAGACAACGATAGAGAATCCGCTATGGTCGTCGAGTGGGAACAAAGGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
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| 3UTR-3UTR TCA 90 bp | TCTGTCCTGTCCTTGACGGATTTCCAAGAATGCTGGTTCCACAGCTGGGGGATATCTGGTGACCAAAGGTaGTTTTTCCTGTGGAACAGT | + |
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Preference number: 2 (lower is better) Translates to: SVLSLTDFQECWFHSWGISGDQR*FFLWNS Trigger: ACTGTTCCACAGGAAAAATCACCTTTGGTCACCAGA...TATCCCCCAGCTGTGGAACCAGCATTCTTGGAAATCCGTCAAGGACAGGACAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
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| 3UTR-3UTR TCA 90 bp | CATTCCATCGTTGTCCTTTGTTCCCACTCGACGACCATAGCGGATTCTCTATCGCTTCTGTCCTGTCCTTaGCGGATTTCCAAGAATGCT | + |
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Preference number: 2 (lower is better) Translates to: HSIVVLCSHSTTIADSLSLLSCP*RISKNA Trigger: AGCATTCTTGGAAATCCGTCAAGGACAGGACAGAAG...CGATAGAGAATCCGCTATGGTCGTCGAGTGGGAACAAAGGACAACGATGGAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
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| 3UTR-3UTR CCA 90 bp | AGGAAAGCCCGGAATCCCAGGGCAACAATGAAGAGCCATACGAAGACAAGCAAAGTGTTTTACTCATCTTaGGGAGCACAGAACTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: RKARNPRATMKSHTKTSKVFYSS*GAQNWG Trigger: ACCCCAGTTCTGTGCTCCCCAAGATGAGTAAAACAC...TTTGCTTGTCTTCGTATGGCTCTTCATTGTTGCCCTGGGATTCCGGGCTTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
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| 3UTR CAA 90 bp | ACAATGAGCTGCACCAAGGCTTCTCTTGGCTTCACGTTGAATCCATaGTACTGGCTGGTCTGGCATCTGTACATTCCTGACATTTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: TMSCTKASLGFTLNP*YWLVWHLYIPDISL Trigger: AAGGGAAATGTCAGGAATGTACAGATGCCAGACCAGCCAGTACAATGGATTCAACGTGAAGCCAAGAGAAGCCTTGGTGCAGCTCATTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
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| 3UTR CAA 90 bp | GTAATAATTTATTGCCCAGACGCCACTCATAGGTCAGCACTCGTATaGGATAGGCTCTCAGGACCCTACAGCTCATGGTCACACTTCTGT | + |
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Preference number: 2 (lower is better) Translates to: VIIYCPDATHRSALV*DRLSGPYSSWSHFC Trigger: ACAGAAGTGTGACCATGAGCTGTAGGGTCCTGAGAGCCTATCCAATACGAGTGCTGACCTATGAGTGGCGTCTGGGCAATAAATTATTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
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| 3UTR-3UTR TCA 90 bp | AGGAAAGCCCGGAATCCCAGGGCAACAATGAAGAGCCATACGAAGACAAGCAAACTTCATAGGAACAGATaGCGTAGTTTGGGTGTCAAG | + |
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Preference number: 2 (lower is better) Translates to: RKARNPRATMKSHTKTSKLHRNR*RSLGVK Trigger: CTTGACACCCAAACTACGTCATCTGTTCCTATGAAG...TTTGCTTGTCTTCGTATGGCTCTTCATTGTTGCCCTGGGATTCCGGGCTTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
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| 3UTR-3UTR TCA 90 bp | GTCCTTTGTTCCCACTCGACGACCATAGCGGATTCTCTATCGTTGTCTGCCCTTTCCTCAAAGTCTCATTaGAGACACTTGAGTCTTGGA | + |
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Preference number: 2 (lower is better) Translates to: VLCSHSTTIADSLSLSALSSKSH*RHLSLG Trigger: TCCAAGACTCAAGTGTCTTCAATGAGACTTTGAGGA...AAGGGCAGACAACGATAGAGAATCCGCTATGGTCGTCGAGTGGGAACAAAGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
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| 3UTR-3UTR GCA 90 bp | GTCCTTTGTTCCCACTCGACGACCATAGCGGATTCTCTATCGTTGTCTGCCCTTTGTTCCTTGTTGCAGTaGTTTGCTTTGTCCAGTCAA | + |
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Preference number: 2 (lower is better) Translates to: VLCSHSTTIADSLSLSALCSLLQ*FALSSQ Trigger: TTGACTGGACAAAGCAAAGCACTGCAACAAGGAACA...AAGGGCAGACAACGATAGAGAATCCGCTATGGTCGTCGAGTGGGAACAAAGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
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| 3UTR-3UTR CCA 90 bp | GTCCTTTGTTCCCACTCGACGACCATAGCGGATTCTCTATCGTTGTCTGCCCTTAACAGTCAGATTGGGTaGAACTGTACTGCTGGAAAT | + |
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Preference number: 2 (lower is better) Translates to: VLCSHSTTIADSLSLSALNSQIG*NCTAGN Trigger: ATTTCCAGCAGTACAGTTCCACCCAATCTGACTGTT...AAGGGCAGACAACGATAGAGAATCCGCTATGGTCGTCGAGTGGGAACAAAGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
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| 3UTR CAA 90 bp | CTACTGGATCATCCAAGTAGTACACATCCACTCGGATCGACTTTATaGCTGGTGACCCCAAGCCATTCTCTGCTTTACAGTAATATCGGC | + |
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Preference number: 2 (lower is better) Translates to: LLDHPSSTHPLGSTL*LVTPSHSLLYSNIG Trigger: GCCGATATTACTGTAAAGCAGAGAATGGCTTGGGGTCACCAGCAATAAAGTCGATCCGAGTGGATGTGTACTACTTGGATGATCCAGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
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| 3UTR CAA 90 bp | GGGACCCGTGTTAGGGGTGTATTTTGTGTTCCTTGTTGCAGTGCTTaGCTTTGTCCAGTCAAAGTTATCCGTATCGTCTTGGGTGAACAA | + |
|
Preference number: 2 (lower is better) Translates to: GTRVRGVFCVPCCSA*LCPVKVIRIVLGEQ Trigger: TTGTTCACCCAAGACGATACGGATAACTTTGACTGGACAAAGCAAAGCACTGCAACAAGGAACACAAAATACACCCCTAACACGGGTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR-3UTR GCA 90 bp | GCGAGAAATTCAGTTTCTCACCACCTCGCTAGTCTGTCTGCTTTCCCCTCTGATGTCTTGCCTGTAATTTaGACATTTAGGCTGTGTCGT | + |
|
Preference number: 2 (lower is better) Translates to: ARNSVSHHLASLSAFPSDVLPVI*TFRLCR Trigger: ACGACACAGCCTAAATGTGCAAATTACAGGCAAGAC...ATCAGAGGGGAAAGCAGACAGACTAGCGAGGTGGTGAGAAACTGAATTTCTCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| 3UTR-3UTR GCA 90 bp | GTCCTTTGTTCCCACTCGACGACCATAGCGGATTCTCTATCGTTGTCTGCCCTTCATTATTATTGGCAATaGAGCTGTAAGTACCAGCGT | + |
|
Preference number: 2 (lower is better) Translates to: VLCSHSTTIADSLSLSALHYYWQ*SCKYQR Trigger: ACGCTGGTACTTACAGCTGCATTGCCAATAATAATG...AAGGGCAGACAACGATAGAGAATCCGCTATGGTCGTCGAGTGGGAACAAAGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR-3UTR CCA 90 bp | CCTTTTCGCCTTCTAGTCTGGGTCGCGATGTCTCAATGTACATATAAAAACCTTGGACCCTACAGCTCATaGTCACACTTCTGTCCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: PFRLLVWVAMSQCTYKNLGPYSS*SHFCPV Trigger: GACAGGACAGAAGTGTGACCATGAGCTGTAGGGTCC...AAGGTTTTTATATGTACATTGAGACATCGCGACCCAGACTAGAAGGCGAAAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR-3UTR TCA 90 bp | CAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTCATGCCAGTGCCTGGTaGATCATTTATAGCCTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: QKHLKGSFVPRPRISSICHASAW*IIYSLC Trigger: GCAGAGGCTATAAATGATTCACCAGGCACTGGCATG...ACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
||
| 3UTR-3UTR TCA 90 bp | TATTTTCACCTCACGCCCAATCTGGATGTTGTCATCTTTGTGATAAGGATCAGGCATGCCAGTGCCTGGTaGATCATTTATAGCCTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: YFHLTPNLDVVIFVIRIRHASAW*IIYSLC Trigger: GCAGAGGCTATAAATGATTCACCAGGCACTGGCATG...CCTGATCCTTATCACAAAGATGACAACATCCAGATTGGGCGTGAGGTGAAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR-3UTR CCA 90 bp | TTTAGAATAAAGCCAGATTGTTTTCAGGCCCAGTTCCGCGGCAGAGTTTGTATGGTTTACGCAGCAGCGTaGGTCCTTTCTTCTTCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: FRIKPDCFQAQFRGRVCMVYAAA*VLSSSE Trigger: TTCTGAAGAAGAAAGGACCCACGCTGCTGCGTAAAC...CATACAAACTCTGCCGCGGAACTGGGCCTGAAAACAATCTGGCTTTATTCTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| 3UTR-3UTR TCA 90 bp | GCGAGAAATTCAGTTTCTCACCACCTCGCTAGTCTGTCTGCTTTCCCCTCTGATGCAATTGAAAGAAGATaGCAAATAGAGGCTCTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: ARNSVSHHLASLSAFPSDAIERR*QIEALF Trigger: AAAGAGAGCCTCTATTTGTCATCTTCTTTCAATTGC...ATCAGAGGGGAAAGCAGACAGACTAGCGAGGTGGTGAGAAACTGAATTTCTCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| 3UTR-3UTR GCA 90 bp | GCGAGAAATTCAGTTTCTCACCACCTCGCTAGTCTGTCTGCTTTCCCCTCTGATTGTTTTACCACCTTCTaGGCTAAGTATTATCTCAAC | + |
|
Preference number: 2 (lower is better) Translates to: ARNSVSHHLASLSAFPSDCFTTF*AKYYLN Trigger: GTTGAGATAATACTTAGCGCAGAAGGTGGTAAAACA...ATCAGAGGGGAAAGCAGACAGACTAGCGAGGTGGTGAGAAACTGAATTTCTCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| 3UTR-3UTR CCA 90 bp | AGGAAAGCCCGGAATCCCAGGGCAACAATGAAGAGCCATACGAAGACAAGCAAAAACAACCTTTTGCTCTaGTTGACCCATTTAATAACC | + |
|
Preference number: 2 (lower is better) Translates to: RKARNPRATMKSHTKTSKNNLLL*LTHLIT Trigger: GGTTATTAAATGGGTCAACCAGAGCAAAAGGTTGTT...TTTGCTTGTCTTCGTATGGCTCTTCATTGTTGCCCTGGGATTCCGGGCTTTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| 3UTR-3UTR CCA 90 bp | CATTCCATCGTTGTCCTTTGTTCCCACTCGACGACCATAGCGGATTCTCTATCGATGAACAGTTACTACTaGATCATCCAAGTAGTACAC | + |
|
Preference number: 2 (lower is better) Translates to: HSIVVLCSHSTTIADSLSMNSYY*IIQVVH Trigger: GTGTACTACTTGGATGATCCAGTAGTAACTGTTCAT...CGATAGAGAATCCGCTATGGTCGTCGAGTGGGAACAAAGGACAACGATGGAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR CAA 90 bp | ATCTGCTCTAGACCAAAGGATGATTGGTTTTGGTTTCCCAGTTACTaGACACTGAAGTTCTATTGTGTCTCCTTCTCTGGTGACCAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: ICSRPKDDWFWFPSY*TLKFYCVSFSGDQR Trigger: CCTTTGGTCACCAGAGAAGGAGACACAATAGAACTTCAGTGTCAAGTAACTGGGAAACCAAAACCAATCATCCTTTGGTCTAGAGCAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR CAA 90 bp | CATTGTACTGGCTGGTCTGGCATCTGTACATTCCTGACATTTCCCTaGAAACATTCACAATCCTCAGGGTCCCATCATAACTTTCCATTT | + |
|
Preference number: 2 (lower is better) Translates to: HCTGWSGICTFLTFP*KHSQSSGSHHNFPF Trigger: AAATGGAAAGTTATGATGGGACCCTGAGGATTGTGAATGTTTCAAGGGAAATGTCAGGAATGTACAGATGCCAGACCAGCCAGTACAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR-3UTR TCA 90 bp | GAACAGCTTCTACTTGGCAAGATATTTTCACCTCACGCCCAATCTGGATGTTGTCCTCCTTGGTGTCTCTaGATGTTTGTAATCCTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: EQLLLGKIFSPHAQSGCCPPWCL*MFVILK Trigger: TTTGAGGATTACAAACATTCAGAGACACCAAGGAGG...ACAACATCCAGATTGGGCGTGAGGTGAAAATATCTTGCCAAGTAGAAGCTGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR-3UTR TCA 90 bp | AGCAGTTTTATTGGAAAGTCTAAACGACACCATCTTGTCTGGAATATTACACACCGACTTTATTGCTGGTaGCCCCAAGCCATTCTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: SSFIGKSKRHHLVWNITHRLYCW*PQAILC Trigger: GCAGAGAATGGCTTGGGGTCACCAGCAATAAAGTCG...GTGTGTAATATTCCAGACAAGATGGTGTCGTTTAGACTTTCCAATAAAACTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR-3UTR TCA 90 bp | CACATTATTATTGGCAATGCAGCTGTAAGTACCAGCGTCATCAGAGGTGATGGCCACCAAGAGCTTAATTaGCGGAGAAGCAGTTTTATT | + |
|
Preference number: 2 (lower is better) Translates to: HIIIGNAAVSTSVIRGDGHQELN*RRSSFI Trigger: AATAAAACTGCTTCTCCGTCAATTAAGCTCTTGGTG...GCCATCACCTCTGATGACGCTGGTACTTACAGCTGCATTGCCAATAATAATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR-3UTR TCA 90 bp | CCTTTTCGCCTTCTAGTCTGGGTCGCGATGTCTCAATGTACATATAAAAACCTTTGTCTCCTTCTCTGGTaGCCAAAGGTGATTTTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: PFRLLVWVAMSQCTYKNLCLLLW*PKVIFP Trigger: AGGAAAAATCACCTTTGGTCACCAGAGAAGGAGACA...AAGGTTTTTATATGTACATTGAGACATCGCGACCCAGACTAGAAGGCGAAAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR-3UTR GCA 90 bp | CATCTTCAAATCCACAGTGAAATTCCCTCAAATGAGGATTTACAGGTGCTGTATTACTGCACAATGAGCTaGACCAAGGCTTCTCTTGGC | + |
|
Preference number: 2 (lower is better) Translates to: HLQIHSEIPSNEDLQVLYYCTMS*TKASLG Trigger: GCCAAGAGAAGCCTTGGTGCAGCTCATTGTGCAGTA...ATACAGCACCTGTAAATCCTCATTTGAGGGAATTTCACTGTGGATTTGAAGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR-3UTR CCA 90 bp | AGGAAAGCCCGGAATCCCAGGGCAACAATGAAGAGCCATACGAAGACAAGCAAAGTTCTCTTTAACTTCTaGAGTGTGTTCTCTTACTAT | + |
|
Preference number: 2 (lower is better) Translates to: RKARNPRATMKSHTKTSKVLFNF*SVFSYY Trigger: ATAGTAAGAGAACACACTCCAGAAGTTAAAGAGAAC...TTTGCTTGTCTTCGTATGGCTCTTCATTGTTGCCCTGGGATTCCGGGCTTTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| 3UTR-3UTR CCA 90 bp | TTCACGTTGAATCCATTGTACTGGCTGGTCTGGCATCTGTACATTCCTGACATTCGACACCATCTTGTCTaGAATATTACACACGTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: FTLNPLYWLVWHLYIPDIRHHLV*NITHVP Trigger: AGGAACGTGTGTAATATTCCAGACAAGATGGTGTCG...AATGTCAGGAATGTACAGATGCCAGACCAGCCAGTACAATGGATTCAACGTGAA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR-3UTR CCA 90 bp | CACATTATTATTGGCAATGCAGCTGTAAGTACCAGCGTCATCAGAGGTGATGGCCACATACTAACGTTATaGCCTCTCCAGGATTTACAA | + |
|
Preference number: 2 (lower is better) Translates to: HIIIGNAAVSTSVIRGDGHILTL*PLQDLQ Trigger: TTGTAAATCCTGGAGAGGCCATAACGTTAGTATGTG...GCCATCACCTCTGATGACGCTGGTACTTACAGCTGCATTGCCAATAATAATGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR-3UTR CCA 90 bp | ATACATCATCAATGGCGATGTCACCCTCTATCCCAGGACCTCGAATGCCTTCAAAAGGATGATTGGTTTTaGTTTCCCAGTTACTTGACA | + |
|
Preference number: 2 (lower is better) Translates to: IHHQWRCHPLSQDLECLQKDDWF*FPSYLT Trigger: TGTCAAGTAACTGGGAAACCAAAACCAATCATCCTT...TTGAAGGCATTCGAGGTCCTGGGATAGAGGGTGACATCGCCATTGATGATGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR CAA 90 bp | CCTTCTCTGGTGACCAAAGGTGATTTTTCCTGTGGAACAGTCAGATaGGGTGGAACTGTACTGCTGGAAATGTTAACATCAATACTGATA | + |
|
Preference number: 2 (lower is better) Translates to: PSLVTKGDFSCGTVR*GGTVLLEMLTSILI Trigger: TATCAGTATTGATGTTAACATTTCCAGCAGTACAGTTCCACCCAATCTGACTGTTCCACAGGAAAAATCACCTTTGGTCACCAGAGAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR CAA 90 bp | GTTGTCCTTTGTTCCCACTCGACGACCATAGCGGATTCTCTATCGTaGTCTGCCCTTTCAAACGTAGATATACATTTAAAACCCCTATAT | + |
|
Preference number: 2 (lower is better) Translates to: VVLCSHSTTIADSLS*SALSNVDIHLKPLY Trigger: ATATAGGGGTTTTAAATGTATATCTACGTTTGAAAGGGCAGACAACGATAGAGAATCCGCTATGGTCGTCGAGTGGGAACAAAGGACAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR-3UTR TCA 90 bp | CACTACATGACAGTGCTGCTAATTGCAATGAAAACAGGCCCAACTCTAGAAATGAGCAGTGCAAGCTTCTaGGTTGAAAATTATTCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: HYMTVLLIAMKTGPTLEMSSASF*VENYSG Trigger: GCCTGAATAATTTTCAACTCAGAAGCTTGCACTGCT...CATTTCTAGAGTTGGGCCTGTTTTCATTGCAATTAGCAGCACTGTCATGTAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| 3UTR-3UTR GCA 90 bp | CACTACATGACAGTGCTGCTAATTGCAATGAAAACAGGCCCAACTCTAGAAATGAAGACTCTTTCTTCATaGCAGTGCCTGGTGAATCAT | + |
|
Preference number: 2 (lower is better) Translates to: HYMTVLLIAMKTGPTLEMKTLSS*QCLVNH Trigger: ATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTT...CATTTCTAGAGTTGGGCCTGTTTTCATTGCAATTAGCAGCACTGTCATGTAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| 3UTR-3UTR GCA 90 bp | CAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTAAGACTCTTTCTTCATaGCAGTGCCTGGTGAATCAT | + |
|
Preference number: 2 (lower is better) Translates to: QKHLKGSFVPRPRISSICKTLSS*QCLVNH Trigger: ATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTT...ACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
||
| 3UTR-3UTR GCA 90 bp | CCAAAGGATGATTGGTTTTGGTTTCCCAGTTACTTGACACTGAAGTTCTATTGTCCCCAAGCCATTCTCTaGTTTACAGTAATATCGGCC | + |
|
Preference number: 2 (lower is better) Translates to: PKDDWFWFPSYLTLKFYCPQAIL*FTVISA Trigger: GGCCGATATTACTGTAAAGCAGAGAATGGCTTGGGG...ACAATAGAACTTCAGTGTCAAGTAACTGGGAAACCAAAACCAATCATCCTTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR-3UTR CCA 90 bp | CACTACATGACAGTGCTGCTAATTGCAATGAAAACAGGCCCAACTCTAGAAATGCCAGGTTTACCATCCTaGATAGTAGTGCATGCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: HYMTVLLIAMKTGPTLEMPGLPS*IVVHAK Trigger: TTTTGCATGCACTACTATCCAGGATGGTAAACCTGG...CATTTCTAGAGTTGGGCCTGTTTTCATTGCAATTAGCAGCACTGTCATGTAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| 3UTR-3UTR CCA 90 bp | TTCACGTTGAATCCATTGTACTGGCTGGTCTGGCATCTGTACATTCCTGACATTAGACCAAAGGATGATTaGTTTTGGTTTCCCAGTTAC | + |
|
Preference number: 2 (lower is better) Translates to: FTLNPLYWLVWHLYIPDIRPKDD*FWFPSY Trigger: GTAACTGGGAAACCAAAACCAATCATCCTTTGGTCT...AATGTCAGGAATGTACAGATGCCAGACCAGCCAGTACAATGGATTCAACGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR CAA 90 bp | ATTGACGGAGAAGCAGTTTTATTGGAAAGTCTAAACGACACCATCTaGTCTGGAATATTACACACGTTCCTTACTGAAGCAATGCAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: IDGEAVLLESLNDTI*SGILHTFLTEAMQL Trigger: CAGCTGCATTGCTTCAGTAAGGAACGTGTGTAATATTCCAGACAAGATGGTGTCGTTTAGACTTTCCAATAAAACTGCTTCTCCGTCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR CAA 90 bp | AAGAAACTGAAACAATATGCACTATTTGTAGGTCCATATGGATTTTaGGGAGCTATGCTGAATACAGGGCTGAGAAGTCGAGCCTTTTCG | + |
|
Preference number: 2 (lower is better) Translates to: KKLKQYALFVGPYGF*GAMLNTGLRSRAFS Trigger: CGAAAAGGCTCGACTTCTCAGCCCTGTATTCAGCATAGCTCCCAAAAATCCATATGGACCTACAAATAGTGCATATTGTTTCAGTTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR-3UTR TCA 90 bp | CACTACATGACAGTGCTGCTAATTGCAATGAAAACAGGCCCAACTCTAGAAATGCAGAGTTCAACCAGATaGAGCTGTAATCATTTTAGC | + |
|
Preference number: 2 (lower is better) Translates to: HYMTVLLIAMKTGPTLEMQSSTR*SCNHFS Trigger: GCTAAAATGATTACAGCTTCATCTGGTTGAACTCTG...CATTTCTAGAGTTGGGCCTGTTTTCATTGCAATTAGCAGCACTGTCATGTAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| 3UTR-3UTR TCA 90 bp | CACTACATGACAGTGCTGCTAATTGCAATGAAAACAGGCCCAACTCTAGAAATGGGACTTGGGTCATATTaGTTCTATCACTATGTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: HYMTVLLIAMKTGPTLEMGLGSY*FYHYVG Trigger: ACCAACATAGTGATAGAATCAATATGACCCAAGTCC...CATTTCTAGAGTTGGGCCTGTTTTCATTGCAATTAGCAGCACTGTCATGTAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| 3UTR-3UTR TCA 90 bp | CCTTTTCGCCTTCTAGTCTGGGTCGCGATGTCTCAATGTACATATAAAAACCTTGATAAGGATCAGGAGTaGTCCAAAATCGTCCTTTTT | + |
|
Preference number: 2 (lower is better) Translates to: PFRLLVWVAMSQCTYKNLDKDQE*SKIVLF Trigger: AAAAAGGACGATTTTGGATCACTCCTGATCCTTATC...AAGGTTTTTATATGTACATTGAGACATCGCGACCCAGACTAGAAGGCGAAAAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR-3UTR GCA 90 bp | CACCTTCGAGGGCTTAAGATAGAGATGAGGATGATAACTGGAAAAAGCCATATATCCGTAATAATTTATTaGCCAGACGCCACTCATAGG | + |
|
Preference number: 2 (lower is better) Translates to: HLRGLKIEMRMITGKSHISVIIY*PDATHR Trigger: CCTATGAGTGGCGTCTGGGCAATAAATTATTACGGA...TATATGGCTTTTTCCAGTTATCATCCTCATCTCTATCTTAAGCCCTCGAAGGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR-3UTR CCA 90 bp | TTTAGAATAAAGCCAGATTGTTTTCAGGCCCAGTTCCGCGGCAGAGTTTGTATGGGCACTTGGTTTCCATaGCAATTTATAAAAGATGGT | + |
|
Preference number: 2 (lower is better) Translates to: FRIKPDCFQAQFRGRVCMGTWFP*QFIKDG Trigger: ACCATCTTTTATAAATTGCCATGGAAACCAAGTGCC...CATACAAACTCTGCCGCGGAACTGGGCCTGAAAACAATCTGGCTTTATTCTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| 3UTR-3UTR CCA 90 bp | ATAGCGGATTCTCTATCGTTGTCTGCCCTTTCAAACGTAGATATACATTTAAAAGTGGAACAGTCAGATTaGGTGGAACTGTACTGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: IADSLSLSALSNVDIHLKVEQSD*VELYCW Trigger: CCAGCAGTACAGTTCCACCCAATCTGACTGTTCCAC...TTTTAAATGTATATCTACGTTTGAAAGGGCAGACAACGATAGAGAATCCGCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR CAA 90 bp | TTTCACAGAAAATGCAATAACTCCTCATTGAAATCAACTGCCCAGTaGCAAGAAGAGTGTACCTTCTGCTTTGTTGAGACACAGCTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: FHRKCNNSSLKSTAQ*QEECTFCFVETQLK Trigger: TTTCAGCTGTGTCTCAACAAAGCAGAAGGTACACTCTTCTTGCAACTGGGCAGTTGATTTCAATGAGGAGTTATTGCATTTTCTGTGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| 3UTR-3UTR TCA 90 bp | CACTACATGACAGTGCTGCTAATTGCAATGAAAACAGGCCCAACTCTAGAAATGACTGAGCATTTGATCTaGTGTAAAAACCGTGATTCT | + |
|
Preference number: 2 (lower is better) Translates to: HYMTVLLIAMKTGPTLEMTEHLI*CKNRDS Trigger: AGAATCACGGTTTTTACATCAGATCAAATGCTCAGT...CATTTCTAGAGTTGGGCCTGTTTTCATTGCAATTAGCAGCACTGTCATGTAGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| 3UTR CAA 90 bp | ATTGCAGTTTCTACCCAGAGTTTAACCTCAGCCCTATTCCAAATTTaGGATTCCAGTTTGAGATTCTCAATATGGGTTCAGAGTAGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: IAVSTQSLTSALFQI*DSSLRFSIWVQSSE Trigger: TTCACTACTCTGAACCCATATTGAGAATCTCAAACTGGAATCCAAAATTTGGAATAGGGCTGAGGTTAAACTCTGGGTAGAAACTGCAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| 3UTR CAA 90 bp | GGAATTGGCCACACATCGGAGAAACACTGTTCTCTCATAGTAAAATaGTTCTTTAGCTTCACCTATACTTTGATGAACAGTTACTACTGG | + |
|
Preference number: 2 (lower is better) Translates to: GIGHTSEKHCSLIVK*FFSFTYTLMNSYYW Trigger: CCAGTAGTAACTGTTCATCAAAGTATAGGTGAAGCTAAAGAACAATTTTACTATGAGAGAACAGTGTTTCTCCGATGTGTGGCCAATTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR-3UTR GCA 90 bp | CACCTTCGAGGGCTTAAGATAGAGATGAGGATGATAACTGGAAAAAGCCATATATGCAACTTCTTTATCTaGTCTAGACCAAAGGATGAT | + |
|
Preference number: 2 (lower is better) Translates to: HLRGLKIEMRMITGKSHICNFFI*SRPKDD Trigger: ATCATCCTTTGGTCTAGAGCAGATAAAGAAGTTGCA...TATATGGCTTTTTCCAGTTATCATCCTCATCTCTATCTTAAGCCCTCGAAGGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR-3UTR GCA 90 bp | CACCTTCGAGGGCTTAAGATAGAGATGAGGATGATAACTGGAAAAAGCCATATATTCTCTATCGTTGTCTaGCCTTTCAAACGTAGATAT | + |
|
Preference number: 2 (lower is better) Translates to: HLRGLKIEMRMITGKSHIFSIVV*PFKRRY Trigger: ATATCTACGTTTGAAAGGGCAGACAACGATAGAGAA...TATATGGCTTTTTCCAGTTATCATCCTCATCTCTATCTTAAGCCCTCGAAGGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR-3UTR CCA 90 bp | CACTACATGACAGTGCTGCTAATTGCAATGAAAACAGGCCCAACTCTAGAAATGTTCATTGAAGGCACTTaGTTTCCATGGCAATTTATA | + |
|
Preference number: 2 (lower is better) Translates to: HYMTVLLIAMKTGPTLEMFIEGT*FPWQFI Trigger: TATAAATTGCCATGGAAACCAAGTGCCTTCAATGAA...CATTTCTAGAGTTGGGCCTGTTTTCATTGCAATTAGCAGCACTGTCATGTAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| 3UTR-3UTR CCA 90 bp | CCAAAGGATGATTGGTTTTGGTTTCCCAGTTACTTGACACTGAAGTTCTATTGTGGAACAGCTTCTACTTaGCAAGATATTTTCACCTCA | + |
|
Preference number: 2 (lower is better) Translates to: PKDDWFWFPSYLTLKFYCGTAST*QDIFTS Trigger: TGAGGTGAAAATATCTTGCCAAGTAGAAGCTGTTCC...ACAATAGAACTTCAGTGTCAAGTAACTGGGAAACCAAAACCAATCATCCTTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR-3UTR CCA 90 bp | ATAGCGGATTCTCTATCGTTGTCTGCCCTTTCAAACGTAGATATACATTTAAAAGACTTCATAGGCCTCTaGTTTAATAAGTTCAGTCAA | + |
|
Preference number: 2 (lower is better) Translates to: IADSLSLSALSNVDIHLKDFIGL*FNKFSQ Trigger: TTGACTGAACTTATTAAACCAGAGGCCTATGAAGTC...TTTTAAATGTATATCTACGTTTGAAAGGGCAGACAACGATAGAGAATCCGCTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR GCA 72 bp | GCTGGTTCCACAGCTGGGGGATACTGCACAATGAGCTaGACCAAGGCTTCTCTTGGCTTCACGTTGAATCCA | + |
|
Preference number: 3 (lower is better) Translates to: AGSTAGGYCTMS*TKASLGFTLNP Trigger: TGGATTCAACGTGAAGCCAAGAGAAGCCTTGGTGCAGCTCATTGTGCAGTATCCCCCAGCTGTGGAACCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR CCA 72 bp | ATTGCCCAGACGCCACTCATAGGTCAGCACTCGTATTaGATAGGCTCTCAGGACCCTACAGCTCATGGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: IAQTPLIGQHSY*IGSQDPTAHGH Trigger: GTGACCATGAGCTGTAGGGTCCTGAGAGCCTATCCAATACGAGTGCTGACCTATGAGTGGCGTCTGGGCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR GCA 72 bp | GCGTTGCTGTCCAGCCTGCCGAATACCCAAGCGGTATaGAACAATTCGATCAACTGCATCAGGGTTCATTTG | + |
|
Preference number: 3 (lower is better) Translates to: ALLSSLPNTQAV*NNSINCIRVHL Trigger: CAAATGAACCCTGATGCAGTTGATCGAATTGTTGCATACCGCTTGGGTATTCGGCAGGCTGGACAGCAACGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR CCA 72 bp | GGGATACTGCACAATGAGCTGCACCAAGGCTTCTCTTaGCTTCACGTTGAATCCATTGTACTGGCTGGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: GILHNELHQGFS*LHVESIVLAGL Trigger: CAGACCAGCCAGTACAATGGATTCAACGTGAAGCCAAGAGAAGCCTTGGTGCAGCTCATTGTGCAGTATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR CCA 72 bp | ACTTCTGTCCTGTCCTTGACGGATTTCCAAGAATGCTaGTTCCACAGCTGGGGGATACTGCACAATGAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: TSVLSLTDFQEC*FHSWGILHNEL Trigger: CAGCTCATTGTGCAGTATCCCCCAGCTGTGGAACCAGCATTCTTGGAAATCCGTCAAGGACAGGACAGAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR CCA 72 bp | CTGCCACACGGGGTTGTAGGTGTCATAGTAGAACTCTaGGGCATAGGCCTTTCCTGTAACAAGAAAGCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: LPHGVVGVIVEL*GIGLSCNKKAA Trigger: TGCAGCTTTCTTGTTACAGGAAAGGCCTATGCCCCAGAGTTCTACTATGACACCTACAACCCCGTGTGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR GCA 72 bp | CACCACCTCGCTAGTCTGTCTGCTTTCCCCTCTGATTaGCCCTTGTTCTTCACAACCATCTGCAACTTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: HHLASLSAFPSD*PLFFTTICNFL Trigger: TAAGAAGTTGCAGATGGTTGTGAAGAACAAGGGGCAATCAGAGGGGAAAGCAGACAGACTAGCGAGGTGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| 3UTR TCA 72 bp | TGCCCAGTTGCAAGAAGAGTGTACCTTCTGCTTTGTTaGGACACAGCTGAAACCGTGGAAGTAGTCAGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: CPVARRVYLLLC*DTAETVEVVSN Trigger: GTTGCTGACTACTTCCACGGTTTCAGCTGTGTCTCAACAAAGCAGAAGGTACACTCTTCTTGCAACTGGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| 3UTR TCA 72 bp | TGGCAATGCAGCTGTAAGTACCAGCGTCATCAGAGGTaGTGGCAGGTATGGTCAATGTCCCTCCATTCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: WQCSCKYQRHQR*WQVWSMSLHSK Trigger: TTTTGAATGGAGGGACATTGACCATACCTGCCATCACCTCTGATGACGCTGGTACTTACAGCTGCATTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR GCA 72 bp | ATTGTTTTCAGGCCCAGTTCCGCGGCAGAGTTTGTATaGACGGCAATCTCAAACATTTCCTCGTTCCCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: IVFRPSSAAEFV*TAISNISSFPL Trigger: TAGAGGGAACGAGGAAATGTTTGAGATTGCCGTGCATACAAACTCTGCCGCGGAACTGGGCCTGAAAACAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| 3UTR GCA 72 bp | CCTGAGAGTCAAACTGTCCGGTCCGTAATAATTTATTaGCCAGACGCCACTCATAGGTCAGCACTCGTATTG | + |
|
Preference number: 3 (lower is better) Translates to: PESQTVRSVIIY*PDATHRSALVL Trigger: CAATACGAGTGCTGACCTATGAGTGGCGTCTGGGCAATAAATTATTACGGACCGGACAGTTTGACTCTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR-3UTR CAA 90 bp | GTCCTTTGTTCCCACTCGACGACCATAGCGGATTCTCTATCGTTGTCTGCCCTTCTAAACGACACCATCTaGTCTGGAATATTACACACG | + |
|
Preference number: 3 (lower is better) Translates to: VLCSHSTTIADSLSLSALLNDTI*SGILHT Trigger: CGTGTGTAATATTCCAGACAAGATGGTGTCGTTTAG...AAGGGCAGACAACGATAGAGAATCCGCTATGGTCGTCGAGTGGGAACAAAGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR-3UTR CAA 90 bp | ACATCATCAATGGCGATGTCACCCTCTATCCCAGGACCTCGAATGCCTTCAAAATTCACGTTGAATCCATaGTACTGGCTGGTCTGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: TSSMAMSPSIPGPRMPSKFTLNP*YWLVWH Trigger: ATGCCAGACCAGCCAGTACAATGGATTCAACGTGAA...TTTTGAAGGCATTCGAGGTCCTGGGATAGAGGGTGACATCGCCATTGATGATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR-3UTR CAA 90 bp | ACATCATCAATGGCGATGTCACCCTCTATCCCAGGACCTCGAATGCCTTCAAAAGGGAACAGCTTCTACTaGGCAAGATATTTTCACCTC | + |
|
Preference number: 3 (lower is better) Translates to: TSSMAMSPSIPGPRMPSKGNSFY*ARYFHL Trigger: GAGGTGAAAATATCTTGCCAAGTAGAAGCTGTTCCC...TTTTGAAGGCATTCGAGGTCCTGGGATAGAGGGTGACATCGCCATTGATGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR GCA 72 bp | TCTGACAGTACTCAAGTCCTCTCAGCTCTGTGTGCATaGTCCATATCACTACATGACAGTGCTGCTAATTGC | + |
|
Preference number: 3 (lower is better) Translates to: SDSTQVLSALCA*SISLHDSAANC Trigger: GCAATTAGCAGCACTGTCATGTAGTGATATGGAGCATGCACACAGAGCTGAGAGGACTTGAGTACTGTCAGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| 3UTR CCA 72 bp | TGGTTTGGTTTCTTCATAGGAACAGATGACGTAGTTTaGGTGTCAAGTGGCCGCAAGCAAACTCCGATAAGC | + |
|
Preference number: 3 (lower is better) Translates to: WFGFFIGTDDVV*VSSGRKQTPIS Trigger: GCTTATCGGAGTTTGCTTGCGGCCACTTGACACCCAAACTACGTCATCTGTTCCTATGAAGAAACCAAACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| 3UTR CCA 72 bp | AAGGCTTCTCTTGGCTTCACGTTGAATCCATTGTACTaGCTGGTCTGGCATCTGTACATTCCTGACATTTCC | + |
|
Preference number: 3 (lower is better) Translates to: KASLGFTLNPLY*LVWHLYIPDIS Trigger: GGAAATGTCAGGAATGTACAGATGCCAGACCAGCCAGTACAATGGATTCAACGTGAAGCCAAGAGAAGCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR CCA 72 bp | TTGCACATTCTCCTTCAGCAATTGATACATCATCAATaGCGATGTCACCCTCTATCCCAGGACCTCGAATGC | + |
|
Preference number: 3 (lower is better) Translates to: LHILLQQLIHHQ*RCHPLSQDLEC Trigger: GCATTCGAGGTCCTGGGATAGAGGGTGACATCGCCATTGATGATGTATCAATTGCTGAAGGAGAATGTGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR-3UTR CAA 90 bp | GCGAGAAATTCAGTTTCTCACCACCTCGCTAGTCTGTCTGCTTTCCCCTCTGATGTTTTACACAAACCATaGTTAGCAGTGCAAGCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: ARNSVSHHLASLSAFPSDVLHKP*LAVQAS Trigger: AGAAGCTTGCACTGCTAACAATGGTTTGTGTAAAAC...ATCAGAGGGGAAAGCAGACAGACTAGCGAGGTGGTGAGAAACTGAATTTCTCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| 3UTR-3UTR CAA 90 bp | AGGAAAGCCCGGAATCCCAGGGCAACAATGAAGAGCCATACGAAGACAAGCAAACAAACTCATAATCTGTaGAATACCATAAGCCCCATG | + |
|
Preference number: 3 (lower is better) Translates to: RKARNPRATMKSHTKTSKQTHNL*NTISPM Trigger: CATGGGGCTTATGGTATTCAACAGATTATGAGTTTG...TTTGCTTGTCTTCGTATGGCTCTTCATTGTTGCCCTGGGATTCCGGGCTTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| 3UTR-3UTR CAA 90 bp | CACCTTCGAGGGCTTAAGATAGAGATGAGGATGATAACTGGAAAAAGCCATATACTCGGATCGACTTTATaGCTGGTGACCCCAAGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: HLRGLKIEMRMITGKSHILGSTL*LVTPSH Trigger: ATGGCTTGGGGTCACCAGCAATAAAGTCGATCCGAG...TATATGGCTTTTTCCAGTTATCATCCTCATCTCTATCTTAAGCCCTCGAAGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR TCA 72 bp | ATTCATTGCTATGCTGAGCCAATTCTGTGGGAAATGTaGAGTGCCATTAGTGTCAAGGTCCGCTGTCTGACT | + |
|
Preference number: 3 (lower is better) Translates to: IHCYAEPILWEM*SAISVKVRCLT Trigger: AGTCAGACAGCGGACCTTGACACTAATGGCACTTCACATTTCCCACAGAATTGGCTCAGCATAGCAATGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| 3UTR TCA 72 bp | GTAGTACACATCCACTCGGATCGACTTTATTGCTGGTaGCCCCAAGCCATTCTCTGCTTTACAGTAATATCG | + |
|
Preference number: 3 (lower is better) Translates to: VVHIHSDRLYCW*PQAILCFTVIS Trigger: CGATATTACTGTAAAGCAGAGAATGGCTTGGGGTCACCAGCAATAAAGTCGATCCGAGTGGATGTGTACTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR CCA 72 bp | CTTGGCTTCACGTTGAATCCATTGTACTGGCTGGTCTaGCATCTGTACATTCCTGACATTTCCCTTGAAACA | + |
|
Preference number: 3 (lower is better) Translates to: LGFTLNPLYWLV*HLYIPDISLET Trigger: TGTTTCAAGGGAAATGTCAGGAATGTACAGATGCCAGACCAGCCAGTACAATGGATTCAACGTGAAGCCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR-3UTR CAA 90 bp | AGGAAAGCCCGGAATCCCAGGGCAACAATGAAGAGCCATACGAAGACAAGCAAACGGAAAGAGGCTTTATaGAACAGAGCTGTAAAATTA | + |
|
Preference number: 3 (lower is better) Translates to: RKARNPRATMKSHTKTSKRKEAL*NRAVKL Trigger: TAATTTTACAGCTCTGTTCAATAAAGCCTCTTTCCG...TTTGCTTGTCTTCGTATGGCTCTTCATTGTTGCCCTGGGATTCCGGGCTTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| 3UTR TCA 72 bp | AAGTTCTATTGTGTCTCCTTCTCTGGTGACCAAAGGTaGTTTTTCCTGTGGAACAGTCAGATTGGGTGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: KFYCVSFSGDQR*FFLWNSQIGWN Trigger: GTTCCACCCAATCTGACTGTTCCACAGGAAAAATCACCTTTGGTCACCAGAGAAGGAGACACAATAGAACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR-3UTR CAA 90 bp | CACCTCACGCCCAATCTGGATGTTGTCATCTTTGTGATAAGGATCAGGAGTGATAGCTTCACCTATACTTaGATGAACAGTTACTACTGG | + |
|
Preference number: 3 (lower is better) Translates to: HLTPNLDVVIFVIRIRSDSFTYT*MNSYYW Trigger: CCAGTAGTAACTGTTCATCAAAGTATAGGTGAAGCT...ATCACTCCTGATCCTTATCACAAAGATGACAACATCCAGATTGGGCGTGAGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR-3UTR CAA 90 bp | TATACTCCTGAGAGTCAAACTGTCCGGTCCGTAATAATTTATTGCCCAGACGCCATCATAACTTTCCATTaGCATTGTCCCATCAGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: YTPESQTVRSVIIYCPDAIITFH*HCPIRH Trigger: ATGCCTGATGGGACAATGCAAATGGAAAGTTATGAT...GGCGTCTGGGCAATAAATTATTACGGACCGGACAGTTTGACTCTCAGGAGTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR GCA 72 bp | TTGCATTGTCCCATCAGGCATTGCAACTTCTTTATCTaGTCTAGACCAAAGGATGATTGGTTTTGGTTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LHCPIRHCNFFI*SRPKDDWFWFP Trigger: GGGAAACCAAAACCAATCATCCTTTGGTCTAGAGCAGATAAAGAAGTTGCAATGCCTGATGGGACAATGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR GCA 72 bp | TTAGGGGTGTATTTTGTGTTCCTTGTTGCAGTGCTTTaGTTTGTCCAGTCAAAGTTATCCGTATCGTCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: LGVYFVFLVAVL*FVQSKLSVSSW Trigger: CCAAGACGATACGGATAACTTTGACTGGACAAAGCAAAGCACTGCAACAAGGAACACAAAATACACCCCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR-3UTR CAA 90 bp | TGTACATTCCTGACATTTCCCTTGAAACATTCACAATCCTCAGGGTCCCATCATGGAGAAGCAGTTTTATaGGAAAGTCTAAACGACACC | + |
|
Preference number: 3 (lower is better) Translates to: CTFLTFPLKHSQSSGSHHGEAVL*ESLNDT Trigger: GGTGTCGTTTAGACTTTCCAATAAAACTGCTTCTCC...ATGATGGGACCCTGAGGATTGTGAATGTTTCAAGGGAAATGTCAGGAATGTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR-3UTR CAA 90 bp | TTCACGTTGAATCCATTGTACTGGCTGGTCTGGCATCTGTACATTCCTGACATTTGGTTTCCCAGTTACTaGACACTGAAGTTCTATTGT | + |
|
Preference number: 3 (lower is better) Translates to: FTLNPLYWLVWHLYIPDIWFPSY*TLKFYC Trigger: ACAATAGAACTTCAGTGTCAAGTAACTGGGAAACCA...AATGTCAGGAATGTACAGATGCCAGACCAGCCAGTACAATGGATTCAACGTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR TCA 72 bp | CAAGGAAAGATCATATTTAGTCTTGTTTGTCACATCTaGCAGTACTCAAGTCCTCTCAGCTCTGTGTGCATG | + |
|
Preference number: 3 (lower is better) Translates to: QGKIIFSLVCHI*QYSSPLSSVCM Trigger: CATGCACACAGAGCTGAGAGGACTTGAGTACTGTCAGATGTGACAAACAAGACTAAATATGATCTTTCCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| 3UTR TCA 72 bp | CACCATCTTGTCTGGAATATTACACACGTTCCTTACTaGAGCAATGCAGCTGTAGTTAGCATAATCTTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: HHLVWNITHVPY*SNAAVVSIILR Trigger: CCTCAAGATTATGCTAACTACAGCTGCATTGCTTCAGTAAGGAACGTGTGTAATATTCCAGACAAGATGGTG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR GCA 72 bp | GCATGCTCCATATCACTACATGACAGTGCTGCTAATTaGAATGAAAACAGGCCCAACTCTAGAAATGTTAAC | + |
|
Preference number: 3 (lower is better) Translates to: ACSISLHDSAAN*NENRPNSRNVN Trigger: GTTAACATTTCTAGAGTTGGGCCTGTTTTCATTGCAATTAGCAGCACTGTCATGTAGTGATATGGAGCATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| 3UTR-3UTR CAA 90 bp | GCAACTTCTTTATCTGCTCTAGACCAAAGGATGATTGGTTTTGGTTTCCCAGTTATCCTCAAAGTCTCATaGAAGACACTTGAGTCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: ATSLSALDQRMIGFGFPVILKVS*KTLESW Trigger: CCAAGACTCAAGTGTCTTCAATGAGACTTTGAGGAT...AACTGGGAAACCAAAACCAATCATCCTTTGGTCTAGAGCAGATAAAGAAGTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR-3UTR CAA 90 bp | CCTTTTCGCCTTCTAGTCTGGGTCGCGATGTCTCAATGTACATATAAAAACCTTTTCCTGACATTTCCCTaGAAACATTCACAATCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: PFRLLVWVAMSQCTYKNLFLTFP*KHSQSS Trigger: TGAGGATTGTGAATGTTTCAAGGGAAATGTCAGGAA...AAGGTTTTTATATGTACATTGAGACATCGCGACCCAGACTAGAAGGCGAAAAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR TCA 72 bp | AAGAAGAGTGTACCTTCTGCTTTGTTGAGACACAGCTaGAACCGTGGAAGTAGTCAGCAACTAGAATATATT | + |
|
Preference number: 3 (lower is better) Translates to: KKSVPSALLRHS*NRGSSQQLEYI Trigger: AATATATTCTAGTTGCTGACTACTTCCACGGTTTCAGCTGTGTCTCAACAAAGCAGAAGGTACACTCTTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| 3UTR TCA 72 bp | ATAGAGATGAGGATGATAACTGGAAAAAGCCATATATaGACTAAGATCCCAACAGCACCATCCACGGAATTC | + |
|
Preference number: 3 (lower is better) Translates to: IEMRMITGKSHI*TKIPTAPSTEF Trigger: GAATTCCGTGGATGGTGCTGTTGGGATCTTAGTTCATATATGGCTTTTTCCAGTTATCATCCTCATCTCTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR CCA 72 bp | TGCAACTTCTTTATCTGCTCTAGACCAAAGGATGATTaGTTTTGGTTTCCCAGTTACTTGACACTGAAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: CNFFICSRPKDD*FWFPSYLTLKF Trigger: GAACTTCAGTGTCAAGTAACTGGGAAACCAAAACCAATCATCCTTTGGTCTAGAGCAGATAAAGAAGTTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR CCA 72 bp | GAAACTGAAACAATATGCACTATTTGTAGGTCCATATaGATTTTTGGGAGCTATGCTGAATACAGGGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: ETETICTICRSI*IFGSYAEYRAE Trigger: CTCAGCCCTGTATTCAGCATAGCTCCCAAAAATCCATATGGACCTACAAATAGTGCATATTGTTTCAGTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR TCA 72 bp | CTCACGCAAATCAGCTTAAAGGCAATTGAAAGAAGATaGCAAATAGAGGCTCTCTTTAAACAGGAGACACAT | + |
|
Preference number: 3 (lower is better) Translates to: LTQISLKAIERR*QIEALFKQETH Trigger: ATGTGTCTCCTGTTTAAAGAGAGCCTCTATTTGTCATCTTCTTTCAATTGCCTTTAAGCTGATTTGCGTGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| 3UTR CCA 72 bp | TTCTTTATCTGCTCTAGACCAAAGGATGATTGGTTTTaGTTTCCCAGTTACTTGACACTGAAGTTCTATTGT | + |
|
Preference number: 3 (lower is better) Translates to: FFICSRPKDDWF*FPSYLTLKFYC Trigger: ACAATAGAACTTCAGTGTCAAGTAACTGGGAAACCAAAACCAATCATCCTTTGGTCTAGAGCAGATAAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR CCA 72 bp | TTTAGTGAGAGGAGTCAATCGGACTTCATAGGCCTCTaGTTTAATAAGTTCAGTCAAGTTATATGTAATCAG | + |
|
Preference number: 3 (lower is better) Translates to: FSERSQSDFIGL*FNKFSQVICNQ Trigger: CTGATTACATATAACTTGACTGAACTTATTAAACCAGAGGCCTATGAAGTCCGATTGACTCCTCTCACTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR CCA 72 bp | CTTTGCTTTGTCCAGTCAAAGTTATCCGTATCGTCTTaGGTGAACAAACAAATATTACCATCTTCAAATCCA | + |
|
Preference number: 3 (lower is better) Translates to: LCFVQSKLSVSS*VNKQILPSSNP Trigger: TGGATTTGAAGATGGTAATATTTGTTTGTTCACCCAAGACGATACGGATAACTTTGACTGGACAAAGCAAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR TCA 72 bp | ATTTACAACTATAGGATCATCCACCAAGAGCTTAATTaGCGGAGAAGCAGTTTTATTGGAAAGTCTAAACGA | + |
|
Preference number: 3 (lower is better) Translates to: IYNYRIIHQELN*RRSSFIGKSKR Trigger: TCGTTTAGACTTTCCAATAAAACTGCTTCTCCGTCAATTAAGCTCTTGGTGGATGATCCTATAGTTGTAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR CCA 72 bp | TTCCAAATTTTGGATTCCAGTTTGAGATTCTCAATATaGGTTCAGAGTAGTGAAATCACTACTCATAGACGT | + |
|
Preference number: 3 (lower is better) Translates to: FQILDSSLRFSI*VQSSEITTHRR Trigger: ACGTCTATGAGTAGTGATTTCACTACTCTGAACCCATATTGAGAATCTCAAACTGGAATCCAAAATTTGGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| 3UTR CCA 72 bp | TTGAAAATTATTCAGGCTTGTTTCATTGAAGGCACTTaGTTTCCATGGCAATTTATAAAAGATGGTGGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: LKIIQACFIEGT*FPWQFIKDGGL Trigger: CAAACCACCATCTTTTATAAATTGCCATGGAAACCAAGTGCCTTCAATGAAACAAGCCTGAATAATTTTCAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| CDS-3UTR GCA 90 bp | GCGAGAAATTCAGTTTCTCACCACCTCGCTAGTCTGTCTGCTTTCCCCTCTGATGGCGCGCTCCACTTGTaGCCGGGCCGAGTCGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ARNSVSHHLASLSAFPSDGALHL*PGRVEV Trigger: CACCTCGACTCGGCCCGGGCACAAGTGGAGCGCGCC...ATCAGAGGGGAAAGCAGACAGACTAGCGAGGTGGTGAGAAACTGAATTTCTCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| CDS-3UTR GCA 90 bp | CACATTATTATTGGCAATGCAGCTGTAAGTACCAGCGTCATCAGAGGTGATGGCGGCGCGCTCCACTTGTaGCCGGGCCGAGTCGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HIIIGNAAVSTSVIRGDGGALHL*PGRVEV Trigger: CACCTCGACTCGGCCCGGGCACAAGTGGAGCGCGCC...GCCATCACCTCTGATGACGCTGGTACTTACAGCTGCATTGCCAATAATAATGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| CDS-3UTR CCA 90 bp | CAGGACCCTACAGCTCATGGTCACACTTCTGTCCTGTCCTTGACGGATTTCCAACGCTTCCTGCTGTTTTaGTCCACCTGTGGGCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QDPTAHGHTSVLSLTDFQRFLLF*STCGRG Trigger: TCCACGCCCACAGGTGGACCAAAACAGCAGGAAGCG...TTGGAAATCCGTCAAGGACAGGACAGAAGTGTGACCATGAGCTGTAGGGTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| CDS-3UTR GCA 90 bp | TCAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTGGCGCGCTCCACTTGTaGCCGGGCCGAGTCGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SVSIYKDSFFMPVPGESFGALHL*PGRVEV Trigger: CACCTCGACTCGGCCCGGGCACAAGTGGAGCGCGCC...AAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CCA 90 bp | TTCACGTTGAATCCATTGTACTGGCTGGTCTGGCATCTGTACATTCCTGACATTCGCAGTGGGACCTTCTaGAGGCCAGCGGCCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FTLNPLYWLVWHLYIPDIRSGTF*RPAASK Trigger: CTTGCTGGCCGCTGGCCTCCAGAAGGTCCCACTGCG...AATGTCAGGAATGTACAGATGCCAGACCAGCCAGTACAATGGATTCAACGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| CDS-3UTR CCA 90 bp | TTTAGAATAAAGCCAGATTGTTTTCAGGCCCAGTTCCGCGGCAGAGTTTGTATGCCAAGGGGGACGCAGTaGGACCTTCTGGAGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FRIKPDCFQAQFRGRVCMPRGTQ*DLLEAS Trigger: GCTGGCCTCCAGAAGGTCCCACTGCGTCCCCCTTGG...CATACAAACTCTGCCGCGGAACTGGGCCTGAAAACAATCTGGCTTTATTCTAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| 3UTR CAA 72 bp | TATTGCCCAGACGCCACTCATAGGTCAGCACTCGTATaGGATAGGCTCTCAGGACCCTACAGCTCATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: YCPDATHRSALV*DRLSGPYSSWS Trigger: TGACCATGAGCTGTAGGGTCCTGAGAGCCTATCCAATACGAGTGCTGACCTATGAGTGGCGTCTGGGCAATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| CDS-3UTR TCA 90 bp | AGGAAAGCCCGGAATCCCAGGGCAACAATGAAGAGCCATACGAAGACAAGCAAACAGCGTCATCAGAGGTaGTGGCAGGTATGGTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: RKARNPRATMKSHTKTSKQRHQR*WQVWSM Trigger: CATTGACCATACCTGCCATCACCTCTGATGACGCTG...TTTGCTTGTCTTCGTATGGCTCTTCATTGTTGCCCTGGGATTCCGGGCTTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| CDS-3UTR CCA 90 bp | CAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTACGCAGTGGGACCTTCTaGAGGCCAGCGGCCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QCPFTKTLSSCQCLVNHLRSGTF*RPAASK Trigger: CTTGCTGGCCGCTGGCCTCCAGAAGGTCCCACTGCG...TAAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| 3UTR CAA 72 bp | GCCAGATTGTTTTCAGGCCCAGTTCCGCGGCAGAGTTaGTATGCACGGCAATCTCAAACATTTCCTCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ARLFSGPVPRQS*YARQSQTFPRS Trigger: GGAACGAGGAAATGTTTGAGATTGCCGTGCATACAAACTCTGCCGCGGAACTGGGCCTGAAAACAATCTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| CDS-3UTR TCA 90 bp | CAGGACCCTACAGCTCATGGTCACACTTCTGTCCTGTCCTTGACGGATTTCCAAATTACAGGCCAATCCTaGGTGCACAATCCGAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: QDPTAHGHTSVLSLTDFQITGQS*VHNPNC Trigger: ACAGTTCGGATTGTGCACTCAGGATTGGCCTGTAAT...TTGGAAATCCGTCAAGGACAGGACAGAAGTGTGACCATGAGCTGTAGGGTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| CDS-3UTR TCA 90 bp | GCGAGAAATTCAGTTTCTCACCACCTCGCTAGTCTGTCTGCTTTCCCCTCTGATCTCTTGGCTTCACGTTaGATCCATTGTACTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ARNSVSHHLASLSAFPSDLLASR*IHCTGW Trigger: CCAGCCAGTACAATGGATTCAACGTGAAGCCAAGAG...ATCAGAGGGGAAAGCAGACAGACTAGCGAGGTGGTGAGAAACTGAATTTCTCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| CDS-3UTR CCA 90 bp | AGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTAGTTTGGAATAAGCGCAGTGGGACCTTCTaGAGGCCAGCGGCCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RALLYPGQEYLLYVVWNKRSGTF*RPAASK Trigger: CTTGCTGGCCGCTGGCCTCCAGAAGGTCCCACTGCG...CTTATTCCAAACTACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| 3UTR CAA 72 bp | ACAATGAGCTGCACCAAGGCTTCTCTTGGCTTCACGTaGAATCCATTGTACTGGCTGGTCTGGCATCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: TMSCTKASLGFT*NPLYWLVWHLY Trigger: GTACAGATGCCAGACCAGCCAGTACAATGGATTCAACGTGAAGCCAAGAGAAGCCTTGGTGCAGCTCATTGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| CDS-3UTR TCA 90 bp | AGGAAAGCCCGGAATCCCAGGGCAACAATGAAGAGCCATACGAAGACAAGCAAAATTACAGGCCAATCCTaGGTGCACAATCCGAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: RKARNPRATMKSHTKTSKITGQS*VHNPNC Trigger: ACAGTTCGGATTGTGCACTCAGGATTGGCCTGTAAT...TTTGCTTGTCTTCGTATGGCTCTTCATTGTTGCCCTGGGATTCCGGGCTTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| CDS-3UTR TCA 90 bp | GCCACAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATCAGCGTCATCAGAGGTaGTGGCAGGTATGGTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: ATKAPEGLFCTQAKNIFYQRHQR*WQVWSM Trigger: CATTGACCATACCTGCCATCACCTCTGATGACGCTG...ATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR TCA 90 bp | AGGAAAGCCCGGAATCCCAGGGCAACAATGAAGAGCCATACGAAGACAAGCAAACTTCTGTCCTGTCCTTaGCGGATTTCCAAGAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: RKARNPRATMKSHTKTSKLLSCP*RISKNA Trigger: AGCATTCTTGGAAATCCGTCAAGGACAGGACAGAAG...TTTGCTTGTCTTCGTATGGCTCTTCATTGTTGCCCTGGGATTCCGGGCTTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| CDS-3UTR CCA 90 bp | CATTCCATCGTTGTCCTTTGTTCCCACTCGACGACCATAGCGGATTCTCTATCGTTTCTCCTTCCCGGATaGTATAGACCCTTTCGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: HSIVVLCSHSTTIADSLSFLLPG*YRPFRS Trigger: ACTCCGAAAGGGTCTATACCATCCGGGAAGGAGAAA...CGATAGAGAATCCGCTATGGTCGTCGAGTGGGAACAAAGGACAACGATGGAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| CDS-3UTR CCA 90 bp | AGGAAAGCCCGGAATCCCAGGGCAACAATGAAGAGCCATACGAAGACAAGCAAAGATTTCCAAGAATGCTaGTTCCACAGCTGGGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: RKARNPRATMKSHTKTSKDFQEC*FHSWGI Trigger: TATCCCCCAGCTGTGGAACCAGCATTCTTGGAAATC...TTTGCTTGTCTTCGTATGGCTCTTCATTGTTGCCCTGGGATTCCGGGCTTTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| CDS-3UTR CCA 90 bp | GCGAGAAATTCAGTTTCTCACCACCTCGCTAGTCTGTCTGCTTTCCCCTCTGATTTTCGCCTTCTAGTCTaGGTCGCGATGTCTCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: ARNSVSHHLASLSAFPSDFRLLV*VAMSQC Trigger: ACATTGAGACATCGCGACCCAGACTAGAAGGCGAAA...ATCAGAGGGGAAAGCAGACAGACTAGCGAGGTGGTGAGAAACTGAATTTCTCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| CDS-3UTR TCA 90 bp | AGGAAAGCCCGGAATCCCAGGGCAACAATGAAGAGCCATACGAAGACAAGCAAATCTGGTGACCAAAGGTaGTTTTTCCTGTGGAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: RKARNPRATMKSHTKTSKSGDQR*FFLWNS Trigger: ACTGTTCCACAGGAAAAATCACCTTTGGTCACCAGA...TTTGCTTGTCTTCGTATGGCTCTTCATTGTTGCCCTGGGATTCCGGGCTTTCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| CDS-3UTR TCA 90 bp | AGGAAAGCCCGGAATCCCAGGGCAACAATGAAGAGCCATACGAAGACAAGCAAATGTCTCCTTCTCTGGTaGCCAAAGGTGATTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RKARNPRATMKSHTKTSKCLLLW*PKVIFP Trigger: AGGAAAAATCACCTTTGGTCACCAGAGAAGGAGACA...TTTGCTTGTCTTCGTATGGCTCTTCATTGTTGCCCTGGGATTCCGGGCTTTCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| CDS-3UTR TCA 90 bp | CAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTGGGGATACTGCACAATaGGCTGCACCAAGGCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QKHLKGSFVPRPRISSICGDTAQ*AAPRLL Trigger: GAGAAGCCTTGGTGCAGCTCATTGTGCAGTATCCCC...ACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR GCA 90 bp | CAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTTGTTCCCACCAGCGTTaGTGTCCAGCCTGCCGAATA | + |
|
Preference number: 4 (lower is better) Translates to: QKHLKGSFVPRPRISSICCSHQR*CPACRI Trigger: TATTCGGCAGGCTGGACAGCAACGCTGGTGGGAACA...ACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
||
| CDS-3UTR CCA 90 bp | AAACTGAAACAATATGCACTATTTGTAGGTCCATATGGATTTTTGGGAGCTATGCCAAGGGGGACGCAGTaGGACCTTCTGGAGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KLKQYALFVGPYGFLGAMPRGTQ*DLLEAS Trigger: GCTGGCCTCCAGAAGGTCCCACTGCGTCCCCCTTGG...CATAGCTCCCAAAAATCCATATGGACCTACAAATAGTGCATATTGTTTCAGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| CDS-3UTR CCA 90 bp | TCAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTGGAGCGTACACTCCTTaGCCAGAGATTCCCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SVSIYKDSFFMPVPGESFGAYTP*PEIPSR Trigger: CCTGGAGGGAATCTCTGGCCAAGGAGTGTACGCTCC...AAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR TCA 90 bp | GCCACAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATTACAGGCCAATCCTaGGTGCACAATCCGAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: ATKAPEGLFCTQAKNIFYITGQS*VHNPNC Trigger: ACAGTTCGGATTGTGCACTCAGGATTGGCCTGTAAT...ATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTGTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR TCA 90 bp | GCGAGAAATTCAGTTTCTCACCACCTCGCTAGTCTGTCTGCTTTCCCCTCTGATCCTCCTTGGTGTCTCTaGATGTTTGTAATCCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ARNSVSHHLASLSAFPSDPPWCL*MFVILK Trigger: TTTGAGGATTACAAACATTCAGAGACACCAAGGAGG...ATCAGAGGGGAAAGCAGACAGACTAGCGAGGTGGTGAGAAACTGAATTTCTCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| CDS-3UTR GCA 90 bp | CACTACATGACAGTGCTGCTAATTGCAATGAAAACAGGCCCAACTCTAGAAATGGTCAGAGGCGCTTCCTaGTGTTTTGGTCCACCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: HYMTVLLIAMKTGPTLEMVRGAS*CFGPPD Trigger: ATCAGGTGGACCAAAACAGCAGGAAGCGCCTCTGAC...CATTTCTAGAGTTGGGCCTGTTTTCATTGCAATTAGCAGCACTGTCATGTAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| CDS-3UTR GCA 90 bp | CAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTACGGATTTCCAAGAATaGTGGTTCCACAGCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QKHLKGSFVPRPRISSICTDFQE*WFHSWG Trigger: CCCCCAGCTGTGGAACCAGCATTCTTGGAAATCCGT...ACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR GCA 90 bp | TCAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTTGTTCCCACCAGCGTTaGTGTCCAGCCTGCCGAATA | + |
|
Preference number: 4 (lower is better) Translates to: SVSIYKDSFFMPVPGESFCSHQR*CPACRI Trigger: TATTCGGCAGGCTGGACAGCAACGCTGGTGGGAACA...AAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
||
| CDS-3UTR GCA 90 bp | CAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTATGTTCCCACCAGCGTTaGTGTCCAGCCTGCCGAATA | + |
|
Preference number: 4 (lower is better) Translates to: QCPFTKTLSSCQCLVNHLCSHQR*CPACRI Trigger: TATTCGGCAGGCTGGACAGCAACGCTGGTGGGAACA...TAAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
||
| CDS-3UTR GCA 90 bp | AGGAAAGCCCGGAATCCCAGGGCAACAATGAAGAGCCATACGAAGACAAGCAAATGTTCCTTGTTGCAGTaGTTTGCTTTGTCCAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RKARNPRATMKSHTKTSKCSLLQ*FALSSQ Trigger: TTGACTGGACAAAGCAAAGCACTGCAACAAGGAACA...TTTGCTTGTCTTCGTATGGCTCTTCATTGTTGCCCTGGGATTCCGGGCTTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| CDS-3UTR CCA 90 bp | GCCACAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATTTGTACTGGCTGGTCTaGCATCTGTACATTCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ATKAPEGLFCTQAKNIFYLYWLV*HLYIPD Trigger: GTCAGGAATGTACAGATGCCAGACCAGCCAGTACAA...ATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTGTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CCA 90 bp | CAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTGGTCAGCACTCGTATTaGATAGGCTCTCAGGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: QKHLKGSFVPRPRISSICGQHSY*IGSQDP Trigger: AGGGTCCTGAGAGCCTATCCAATACGAGTGCTGACC...ACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CCA 90 bp | GCCACAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATGTCATAGTAGAACTCTaGGGCATAGGCCTTTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ATKAPEGLFCTQAKNIFYVIVEL*GIGLSC Trigger: ACAGGAAAGGCCTATGCCCCAGAGTTCTACTATGAC...ATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTGTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| 3UTR CAA 72 bp | CATCCAAGTAGTACACATCCACTCGGATCGACTTTATaGCTGGTGACCCCAAGCCATTCTCTGCTTTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: HPSSTHPLGSTL*LVTPSHSLLYS Trigger: ACTGTAAAGCAGAGAATGGCTTGGGGTCACCAGCAATAAAGTCGATCCGAGTGGATGTGTACTACTTGGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR CAA 72 bp | GGCTGGTCTGGCATCTGTACATTCCTGACATTTCCCTaGAAACATTCACAATCCTCAGGGTCCCATCATAAC | + |
|
Preference number: 4 (lower is better) Translates to: GWSGICTFLTFP*KHSQSSGSHHN Trigger: GTTATGATGGGACCCTGAGGATTGTGAATGTTTCAAGGGAAATGTCAGGAATGTACAGATGCCAGACCAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| CDS-3UTR TCA 90 bp | TCAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTCGACTTTATTGCTGGTaGCCCCAAGCCATTCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SVSIYKDSFFMPVPGESFRLYCW*PQAILC Trigger: GCAGAGAATGGCTTGGGGTCACCAGCAATAAAGTCG...AAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR TCA 90 bp | CAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTACGACTTTATTGCTGGTaGCCCCAAGCCATTCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QCPFTKTLSSCQCLVNHLRLYCW*PQAILC Trigger: GCAGAGAATGGCTTGGGGTCACCAGCAATAAAGTCG...TAAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR TCA 90 bp | AGGAAAGCCCGGAATCCCAGGGCAACAATGAAGAGCCATACGAAGACAAGCAAACACCAAGAGCTTAATTaGCGGAGAAGCAGTTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: RKARNPRATMKSHTKTSKHQELN*RRSSFI Trigger: AATAAAACTGCTTCTCCGTCAATTAAGCTCTTGGTG...TTTGCTTGTCTTCGTATGGCTCTTCATTGTTGCCCTGGGATTCCGGGCTTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| CDS-3UTR TCA 90 bp | AGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTAGTTTGGAATAAGGGGGATACTGCACAATaGGCTGCACCAAGGCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RALLYPGQEYLLYVVWNKGDTAQ*AAPRLL Trigger: GAGAAGCCTTGGTGCAGCTCATTGTGCAGTATCCCC...CTTATTCCAAACTACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR GCA 90 bp | CAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTTACTGCACAATGAGCTaGACCAAGGCTTCTCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QKHLKGSFVPRPRISSICYCTMS*TKASLG Trigger: GCCAAGAGAAGCCTTGGTGCAGCTCATTGTGCAGTA...ACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR GCA 90 bp | TCAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTACGGATTTCCAAGAATaGTGGTTCCACAGCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SVSIYKDSFFMPVPGESFTDFQE*WFHSWG Trigger: CCCCCAGCTGTGGAACCAGCATTCTTGGAAATCCGT...AAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR GCA 90 bp | AGGAAAGCCCGGAATCCCAGGGCAACAATGAAGAGCCATACGAAGACAAGCAAATCCCAGGACCTCGAATaGCTTCAAAAATTAACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RKARNPRATMKSHTKTSKSQDLE*LQKLTE Trigger: TTCAGTTAATTTTTGAAGGCATTCGAGGTCCTGGGA...TTTGCTTGTCTTCGTATGGCTCTTCATTGTTGCCCTGGGATTCCGGGCTTTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| CDS-3UTR CCA 90 bp | AGCAGTTTTATTGGAAAGTCTAAACGACACCATCTTGTCTGGAATATTACACACGGAGCGTACACTCCTTaGCCAGAGATTCCCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSFIGKSKRHHLVWNITHGAYTP*PEIPSR Trigger: CCTGGAGGGAATCTCTGGCCAAGGAGTGTACGCTCC...GTGTGTAATATTCCAGACAAGATGGTGTCGTTTAGACTTTCCAATAAAACTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| CDS-3UTR CCA 90 bp | GCCACAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATAAGACACTTGAGTCTTaGAATCTGTCAGAGGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ATKAPEGLFCTQAKNIFYKTLES*NLSEAL Trigger: AAGCGCCTCTGACAGATTCCAAGACTCAAGTGTCTT...ATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTGTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CCA 90 bp | AGGAAAGCCCGGAATCCCAGGGCAACAATGAAGAGCCATACGAAGACAAGCAAACACATACTAACGTTATaGCCTCTCCAGGATTTACAA | + |
|
Preference number: 4 (lower is better) Translates to: RKARNPRATMKSHTKTSKHILTL*PLQDLQ Trigger: TTGTAAATCCTGGAGAGGCCATAACGTTAGTATGTG...TTTGCTTGTCTTCGTATGGCTCTTCATTGTTGCCCTGGGATTCCGGGCTTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| CDS-3UTR CCA 90 bp | GCGAGAAATTCAGTTTCTCACCACCTCGCTAGTCTGTCTGCTTTCCCCTCTGATAGACCAAAGGATGATTaGTTTTGGTTTCCCAGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: ARNSVSHHLASLSAFPSDRPKDD*FWFPSY Trigger: GTAACTGGGAAACCAAAACCAATCATCCTTTGGTCT...ATCAGAGGGGAAAGCAGACAGACTAGCGAGGTGGTGAGAAACTGAATTTCTCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| CDS-3UTR CCA 90 bp | GCCACAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATCACCAAGGCTTCTCTTaGCTTCACGTTGAATCCATT | + |
|
Preference number: 4 (lower is better) Translates to: ATKAPEGLFCTQAKNIFYHQGFS*LHVESI Trigger: AATGGATTCAACGTGAAGCCAAGAGAAGCCTTGGTG...ATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTGTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CCA 90 bp | TCAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTGGACCCTACAGCTCATaGTCACACTTCTGTCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SVSIYKDSFFMPVPGESFGPYSS*SHFCPV Trigger: GACAGGACAGAAGTGTGACCATGAGCTGTAGGGTCC...AAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CCA 90 bp | CAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTAGGACCCTACAGCTCATaGTCACACTTCTGTCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QCPFTKTLSSCQCLVNHLGPYSS*SHFCPV Trigger: GACAGGACAGAAGTGTGACCATGAGCTGTAGGGTCC...TAAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR TCA 90 bp | TCAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTCTCTTGGCTTCACGTTaGATCCATTGTACTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVSIYKDSFFMPVPGESFLLASR*IHCTGW Trigger: CCAGCCAGTACAATGGATTCAACGTGAAGCCAAGAG...AAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR GCA 90 bp | AGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTAGTTTGGAATAAGGTCAGAGGCGCTTCCTaGTGTTTTGGTCCACCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RALLYPGQEYLLYVVWNKVRGAS*CFGPPD Trigger: ATCAGGTGGACCAAAACAGCAGGAAGCGCCTCTGAC...CTTATTCCAAACTACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR GCA 90 bp | CACTACATGACAGTGCTGCTAATTGCAATGAAAACAGGCCCAACTCTAGAAATGCCCCAAGCCATTCTCTaGTTTACAGTAATATCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HYMTVLLIAMKTGPTLEMPQAIL*FTVISA Trigger: GGCCGATATTACTGTAAAGCAGAGAATGGCTTGGGG...CATTTCTAGAGTTGGGCCTGTTTTCATTGCAATTAGCAGCACTGTCATGTAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| CDS-3UTR GCA 90 bp | CAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTCCCCAAGCCATTCTCTaGTTTACAGTAATATCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QKHLKGSFVPRPRISSICPQAIL*FTVISA Trigger: GGCCGATATTACTGTAAAGCAGAGAATGGCTTGGGG...ACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR GCA 90 bp | CAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTATACTGCACAATGAGCTaGACCAAGGCTTCTCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QCPFTKTLSSCQCLVNHLYCTMS*TKASLG Trigger: GCCAAGAGAAGCCTTGGTGCAGCTCATTGTGCAGTA...TAAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR GCA 90 bp | GCCACAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATTCCGTAATAATTTATTaGCCAGACGCCACTCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: ATKAPEGLFCTQAKNIFYSVIIY*PDATHR Trigger: CCTATGAGTGGCGTCTGGGCAATAAATTATTACGGA...ATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTGTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CCA 90 bp | CACTACATGACAGTGCTGCTAATTGCAATGAAAACAGGCCCAACTCTAGAAATGTTTCTCCTTCCCGGATaGTATAGACCCTTTCGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: HYMTVLLIAMKTGPTLEMFLLPG*YRPFRS Trigger: ACTCCGAAAGGGTCTATACCATCCGGGAAGGAGAAA...CATTTCTAGAGTTGGGCCTGTTTTCATTGCAATTAGCAGCACTGTCATGTAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| CDS-3UTR CCA 90 bp | AGGAAAGCCCGGAATCCCAGGGCAACAATGAAGAGCCATACGAAGACAAGCAAAATGAACAGTTACTACTaGATCATCCAAGTAGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: RKARNPRATMKSHTKTSKMNSYY*IIQVVH Trigger: GTGTACTACTTGGATGATCCAGTAGTAACTGTTCAT...TTTGCTTGTCTTCGTATGGCTCTTCATTGTTGCCCTGGGATTCCGGGCTTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| CDS-3UTR CCA 90 bp | GCCACAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATCGACACCATCTTGTCTaGAATATTACACACGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ATKAPEGLFCTQAKNIFYRHHLV*NITHVP Trigger: AGGAACGTGTGTAATATTCCAGACAAGATGGTGTCG...ATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTGTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CCA 90 bp | CAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTAGTGGAACAGTCAGATTaGGTGGAACTGTACTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QCPFTKTLSSCQCLVNHLVEQSD*VELYCW Trigger: CCAGCAGTACAGTTCCACCCAATCTGACTGTTCCAC...TAAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CCA 90 bp | TCAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTGTGGAACAGTCAGATTaGGTGGAACTGTACTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVSIYKDSFFMPVPGESFVEQSD*VELYCW Trigger: CCAGCAGTACAGTTCCACCCAATCTGACTGTTCCAC...AAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CCA 90 bp | AGGAAAGCCCGGAATCCCAGGGCAACAATGAAGAGCCATACGAAGACAAGCAAAAAGGATGATTGGTTTTaGTTTCCCAGTTACTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: RKARNPRATMKSHTKTSKKDDWF*FPSYLT Trigger: TGTCAAGTAACTGGGAAACCAAAACCAATCATCCTT...TTTGCTTGTCTTCGTATGGCTCTTCATTGTTGCCCTGGGATTCCGGGCTTTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| CDS-3UTR CCA 90 bp | TTTAGAATAAAGCCAGATTGTTTTCAGGCCCAGTTCCGCGGCAGAGTTTGTATGTTGAATCCATTGTACTaGCTGGTCTGGCATCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: FRIKPDCFQAQFRGRVCMLNPLY*LVWHLY Trigger: GTACAGATGCCAGACCAGCCAGTACAATGGATTCAA...CATACAAACTCTGCCGCGGAACTGGGCCTGAAAACAATCTGGCTTTATTCTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| CDS-3UTR CCA 90 bp | AGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTAGTTTGGAATAAGGGTCAGCACTCGTATTaGATAGGCTCTCAGGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: RALLYPGQEYLLYVVWNKGQHSY*IGSQDP Trigger: AGGGTCCTGAGAGCCTATCCAATACGAGTGCTGACC...CTTATTCCAAACTACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CCA 90 bp | AGGAAAGCCCGGAATCCCAGGGCAACAATGAAGAGCCATACGAAGACAAGCAAAGACTTCATAGGCCTCTaGTTTAATAAGTTCAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RKARNPRATMKSHTKTSKDFIGL*FNKFSQ Trigger: TTGACTGAACTTATTAAACCAGAGGCCTATGAAGTC...TTTGCTTGTCTTCGTATGGCTCTTCATTGTTGCCCTGGGATTCCGGGCTTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| CDS-3UTR TCA 90 bp | GCCACAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATCACCAAGAGCTTAATTaGCGGAGAAGCAGTTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: ATKAPEGLFCTQAKNIFYHQELN*RRSSFI Trigger: AATAAAACTGCTTCTCCGTCAATTAAGCTCTTGGTG...ATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTGTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR TCA 90 bp | TCAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTCTTCTGTCCTGTCCTTaGCGGATTTCCAAGAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVSIYKDSFFMPVPGESFLLSCP*RISKNA Trigger: AGCATTCTTGGAAATCCGTCAAGGACAGGACAGAAG...AAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR TCA 90 bp | GCCACAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATGGAAAAAGCCATATATaGACTAAGATCCCAACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ATKAPEGLFCTQAKNIFYGKSHI*TKIPTA Trigger: TGCTGTTGGGATCTTAGTTCATATATGGCTTTTTCC...ATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTGTGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
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| CDS-3UTR GCA 90 bp | TTTAGAATAAAGCCAGATTGTTTTCAGGCCCAGTTCCGCGGCAGAGTTTGTATGTCCGTAATAATTTATTaGCCAGACGCCACTCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: FRIKPDCFQAQFRGRVCMSVIIY*PDATHR Trigger: CCTATGAGTGGCGTCTGGGCAATAAATTATTACGGA...CATACAAACTCTGCCGCGGAACTGGGCCTGAAAACAATCTGGCTTTATTCTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| CDS-3UTR CCA 90 bp | CAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTATTTCTCCTTCCCGGATaGTATAGACCCTTTCGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QCPFTKTLSSCQCLVNHLFLLPG*YRPFRS Trigger: ACTCCGAAAGGGTCTATACCATCCGGGAAGGAGAAA...TAAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CCA 90 bp | CAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTAAGACACTTGAGTCTTaGAATCTGTCAGAGGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QKHLKGSFVPRPRISSICKTLES*NLSEAL Trigger: AAGCGCCTCTGACAGATTCCAAGACTCAAGTGTCTT...ACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CCA 90 bp | TTTAGAATAAAGCCAGATTGTTTTCAGGCCCAGTTCCGCGGCAGAGTTTGTATGCGACACCATCTTGTCTaGAATATTACACACGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FRIKPDCFQAQFRGRVCMRHHLV*NITHVP Trigger: AGGAACGTGTGTAATATTCCAGACAAGATGGTGTCG...CATACAAACTCTGCCGCGGAACTGGGCCTGAAAACAATCTGGCTTTATTCTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| CDS-3UTR CCA 90 bp | CAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTATTGTACTGGCTGGTCTaGCATCTGTACATTCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QCPFTKTLSSCQCLVNHLLYWLV*HLYIPD Trigger: GTCAGGAATGTACAGATGCCAGACCAGCCAGTACAA...TAAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CCA 90 bp | CAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTCACCAAGGCTTCTCTTaGCTTCACGTTGAATCCATT | + |
|
Preference number: 4 (lower is better) Translates to: QKHLKGSFVPRPRISSICHQGFS*LHVESI Trigger: AATGGATTCAACGTGAAGCCAAGAGAAGCCTTGGTG...ACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CCA 90 bp | TCAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTGTCATAGTAGAACTCTaGGGCATAGGCCTTTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SVSIYKDSFFMPVPGESFVIVEL*GIGLSC Trigger: ACAGGAAAGGCCTATGCCCCAGAGTTCTACTATGAC...AAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CCA 90 bp | GCCACAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATTATAAAAACCTTCTTTaGAACCACTCCGATCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ATKAPEGLFCTQAKNIFYYKNLL*NHSDLH Trigger: GTGCAGATCGGAGTGGTTCCAAAGAAGGTTTTTATA...ATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTGTGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTATTTCGCCTTCTAGTCTaGGTCGCGATGTCTCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: QCPFTKTLSSCQCLVNHLFRLLV*VAMSQC Trigger: ACATTGAGACATCGCGACCCAGACTAGAAGGCGAAA...TAAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
||
| CDS-3UTR CCA 90 bp | TCAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTTTTCGCCTTCTAGTCTaGGTCGCGATGTCTCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: SVSIYKDSFFMPVPGESFFRLLV*VAMSQC Trigger: ACATTGAGACATCGCGACCCAGACTAGAAGGCGAAA...AAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTGA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
||
| CDS-3UTR CCA 90 bp | AGGAAAGCCCGGAATCCCAGGGCAACAATGAAGAGCCATACGAAGACAAGCAAAGATGAGGATGATAACTaGAAAAAGCCATATATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RKARNPRATMKSHTKTSKDEDDN*KKPYMN Trigger: GTTCATATATGGCTTTTTCCAGTTATCATCCTCATC...TTTGCTTGTCTTCGTATGGCTCTTCATTGTTGCCCTGGGATTCCGGGCTTTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| 3UTR CAA 72 bp | CAAGCCATTCTCTGCTTTACAGTAATATCGGCCTCCTaGGTGTCTCTGAATGTTTGTAATCCTCAAAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QAILCFTVISAS*VSLNVCNPQSL Trigger: GAGACTTTGAGGATTACAAACATTCAGAGACACCAAGGAGGCCGATATTACTGTAAAGCAGAGAATGGCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR CAA 72 bp | TTGGTAGGTCTTGTTTTGCACATTCTCCTTCAGCAATaGATACATCATCAATGGCGATGTCACCCTCTATCC | + |
|
Preference number: 4 (lower is better) Translates to: LVGLVLHILLQQ*IHHQWRCHPLS Trigger: GGATAGAGGGTGACATCGCCATTGATGATGTATCAATTGCTGAAGGAGAATGTGCAAAACAAGACCTACCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| CDS-3UTR TCA 90 bp | CAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTCCTCCTTGGTGTCTCTaGATGTTTGTAATCCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: QKHLKGSFVPRPRISSICPPWCL*MFVILK Trigger: TTTGAGGATTACAAACATTCAGAGACACCAAGGAGG...ACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR GCA 90 bp | GCCACAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATTGCAACTTCTTTATCTaGTCTAGACCAAAGGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: ATKAPEGLFCTQAKNIFYCNFFI*SRPKDD Trigger: ATCATCCTTTGGTCTAGAGCAGATAAAGAAGTTGCA...ATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTGTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR GCA 90 bp | GCCACAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATTTCTCTATCGTTGTCTaGCCTTTCAAACGTAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: ATKAPEGLFCTQAKNIFYFSIVV*PFKRRY Trigger: ATATCTACGTTTGAAAGGGCAGACAACGATAGAGAA...ATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTGTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
||
| CDS-3UTR CCA 90 bp | GCCACAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGAACAGTTACTACTaGATCATCCAAGTAGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: ATKAPEGLFCTQAKNIFYMNSYY*IIQVVH Trigger: GTGTACTACTTGGATGATCCAGTAGTAACTGTTCAT...ATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTGTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CCA 90 bp | CACTACATGACAGTGCTGCTAATTGCAATGAAAACAGGCCCAACTCTAGAAATGAACAGTCAGATTGGGTaGAACTGTACTGCTGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HYMTVLLIAMKTGPTLEMNSQIG*NCTAGN Trigger: ATTTCCAGCAGTACAGTTCCACCCAATCTGACTGTT...CATTTCTAGAGTTGGGCCTGTTTTCATTGCAATTAGCAGCACTGTCATGTAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| CDS-3UTR CCA 90 bp | TCAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTTTGAATCCATTGTACTaGCTGGTCTGGCATCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SVSIYKDSFFMPVPGESFLNPLY*LVWHLY Trigger: GTACAGATGCCAGACCAGCCAGTACAATGGATTCAA...AAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CCA 90 bp | AGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTAGTTTGGAATAAGGATTTCCAAGAATGCTaGTTCCACAGCTGGGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: RALLYPGQEYLLYVVWNKDFQEC*FHSWGI Trigger: TATCCCCCAGCTGTGGAACCAGCATTCTTGGAAATC...CTTATTCCAAACTACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CCA 90 bp | GCCACAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATTTGTAGGTCCATATaGATTTTTGGGAGCTATGCT | + |
|
Preference number: 4 (lower is better) Translates to: ATKAPEGLFCTQAKNIFYICRSI*IFGSYA Trigger: AGCATAGCTCCCAAAAATCCATATGGACCTACAAAT...ATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTGTGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
||
| 3UTR CAA 72 bp | ATTCACAATCCTCAGGGTCCCATCATAACTTTCCATTaGCATTGTCCCATCAGGCATTGCAACTTCTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: IHNPQGPIITFH*HCPIRHCNFFI Trigger: GATAAAGAAGTTGCAATGCCTGATGGGACAATGCAAATGGAAAGTTATGATGGGACCCTGAGGATTGTGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR CAA 72 bp | TGTTCCCACTCGACGACCATAGCGGATTCTCTATCGTaGTCTGCCCTTTCAAACGTAGATATACATTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: CSHSTTIADSLS*SALSNVDIHLK Trigger: TTTTAAATGTATATCTACGTTTGAAAGGGCAGACAACGATAGAGAATCCGCTATGGTCGTCGAGTGGGAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| CDS-3UTR TCA 90 bp | TCAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTCTCATTGAAGACACTTaGGTCTTGGAATCTGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SVSIYKDSFFMPVPGESFLIEDT*VLESVR Trigger: TCTGACAGATTCCAAGACTCAAGTGTCTTCAATGAG...AAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR TCA 90 bp | CAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTGATAAGGATCAGGAGTaGTCCAAAATCGTCCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QKHLKGSFVPRPRISSICDKDQE*SKIVLF Trigger: AAAAAGGACGATTTTGGATCACTCCTGATCCTTATC...ACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR TCA 90 bp | AGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTAGTTTGGAATAAGTCTGGTGACCAAAGGTaGTTTTTCCTGTGGAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: RALLYPGQEYLLYVVWNKSGDQR*FFLWNS Trigger: ACTGTTCCACAGGAAAAATCACCTTTGGTCACCAGA...CTTATTCCAAACTACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR TCA 90 bp | AGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTAGTTTGGAATAAGTGTCTCCTTCTCTGGTaGCCAAAGGTGATTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RALLYPGQEYLLYVVWNKCLLLW*PKVIFP Trigger: AGGAAAAATCACCTTTGGTCACCAGAGAAGGAGACA...CTTATTCCAAACTACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR TCA 90 bp | CAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTCTCCAGCTTCATTTATaGTGCTGCAGTTATAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: QKHLKGSFVPRPRISSICLQLHL*CCSYKL Trigger: GAGTTTATAACTGCAGCATCATAAATGAAGCTGGAG...ACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR TCA 90 bp | CACTACATGACAGTGCTGCTAATTGCAATGAAAACAGGCCCAACTCTAGAAATGGGAAAAAGCCATATATaGACTAAGATCCCAACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HYMTVLLIAMKTGPTLEMGKSHI*TKIPTA Trigger: TGCTGTTGGGATCTTAGTTCATATATGGCTTTTTCC...CATTTCTAGAGTTGGGCCTGTTTTCATTGCAATTAGCAGCACTGTCATGTAGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| CDS-3UTR TCA 90 bp | CAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTGGAAAAAGCCATATATaGACTAAGATCCCAACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QKHLKGSFVPRPRISSICGKSHI*TKIPTA Trigger: TGCTGTTGGGATCTTAGTTCATATATGGCTTTTTCC...ACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
||
| CDS-3UTR CCA 90 bp | CAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTGGAACAGCTTCTACTTaGCAAGATATTTTCACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QKHLKGSFVPRPRISSICGTAST*QDIFTS Trigger: TGAGGTGAAAATATCTTGCCAAGTAGAAGCTGTTCC...ACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CCA 90 bp | CAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTAAACAGTCAGATTGGGTaGAACTGTACTGCTGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QCPFTKTLSSCQCLVNHLNSQIG*NCTAGN Trigger: ATTTCCAGCAGTACAGTTCCACCCAATCTGACTGTT...TAAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CCA 90 bp | CAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTTATAAAAACCTTCTTTaGAACCACTCCGATCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QKHLKGSFVPRPRISSICYKNLL*NHSDLH Trigger: GTGCAGATCGGAGTGGTTCCAAAGAAGGTTTTTATA...ACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTATTGATACATCATCAATaGCGATGTCACCCTCTATCC | + |
|
Preference number: 4 (lower is better) Translates to: QCPFTKTLSSCQCLVNHLLIHHQ*RCHPLS Trigger: GGATAGAGGGTGACATCGCCATTGATGATGTATCAA...TAAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
||
| CDS-3UTR CCA 90 bp | TCAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTTTGATACATCATCAATaGCGATGTCACCCTCTATCC | + |
|
Preference number: 4 (lower is better) Translates to: SVSIYKDSFFMPVPGESFLIHHQ*RCHPLS Trigger: GGATAGAGGGTGACATCGCCATTGATGATGTATCAA...AAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
||
| CDS-3UTR TCA 90 bp | AGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTAGTTTGGAATAAGTCCTCAAAGTCTCATTaGAGACACTTGAGTCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RALLYPGQEYLLYVVWNKSSKSH*RHLSLG Trigger: TCCAAGACTCAAGTGTCTTCAATGAGACTTTGAGGA...CTTATTCCAAACTACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR TCA 90 bp | TCAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTCTCCAGCTTCATTTATaGTGCTGCAGTTATAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: SVSIYKDSFFMPVPGESFLQLHL*CCSYKL Trigger: GAGTTTATAACTGCAGCATCATAAATGAAGCTGGAG...AAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR TCA 90 bp | CAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTATTCTCCTTCAGCAATTaGTACATCATCAATGGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: QCPFTKTLSSCQCLVNHLFSFSN*YIINGD Trigger: ATCGCCATTGATGATGTATCAATTGCTGAAGGAGAA...TAAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
||
| CDS-3UTR GCA 90 bp | CAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTACATTATTATTGGCAATaGAGCTGTAAGTACCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: QCPFTKTLSSCQCLVNHLHYYWQ*SCKYQR Trigger: ACGCTGGTACTTACAGCTGCATTGCCAATAATAATG...TAAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR GCA 90 bp | CAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTTGCAACTTCTTTATCTaGTCTAGACCAAAGGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: QKHLKGSFVPRPRISSICCNFFI*SRPKDD Trigger: ATCATCCTTTGGTCTAGAGCAGATAAAGAAGTTGCA...ACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR GCA 90 bp | TCAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTCTTGTTGCAGTGCTTTaGTTTGTCCAGTCAAAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: SVSIYKDSFFMPVPGESFLVAVL*FVQSKL Trigger: TAACTTTGACTGGACAAAGCAAAGCACTGCAACAAG...AAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
||
| CDS-3UTR GCA 90 bp | CAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTACTTGTTGCAGTGCTTTaGTTTGTCCAGTCAAAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: QCPFTKTLSSCQCLVNHLLVAVL*FVQSKL Trigger: TAACTTTGACTGGACAAAGCAAAGCACTGCAACAAG...TAAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
||
| CDS-3UTR GCA 90 bp | AGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTAGTTTGGAATAAGTGTTCCTTGTTGCAGTaGTTTGCTTTGTCCAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RALLYPGQEYLLYVVWNKCSLLQ*FALSSQ Trigger: TTGACTGGACAAAGCAAAGCACTGCAACAAGGAACA...CTTATTCCAAACTACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
||
| CDS-3UTR CCA 90 bp | TCAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTCACATACTAACGTTATaGCCTCTCCAGGATTTACAA | + |
|
Preference number: 4 (lower is better) Translates to: SVSIYKDSFFMPVPGESFHILTL*PLQDLQ Trigger: TTGTAAATCCTGGAGAGGCCATAACGTTAGTATGTG...AAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CCA 90 bp | CAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTAGGAACAGCTTCTACTTaGCAAGATATTTTCACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QCPFTKTLSSCQCLVNHLGTAST*QDIFTS Trigger: TGAGGTGAAAATATCTTGCCAAGTAGAAGCTGTTCC...TAAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CCA 90 bp | CAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTAAGACCAAAGGATGATTaGTTTTGGTTTCCCAGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: QCPFTKTLSSCQCLVNHLRPKDD*FWFPSY Trigger: GTAACTGGGAAACCAAAACCAATCATCCTTTGGTCT...TAAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CCA 90 bp | CAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTGACTTCATAGGCCTCTaGTTTAATAAGTTCAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QKHLKGSFVPRPRISSICDFIGL*FNKFSQ Trigger: TTGACTGAACTTATTAAACCAGAGGCCTATGAAGTC...ACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
||
| 3UTR CAA 72 bp | ACCACCTTCTGCGCTAAGTATTATCTCAACAACCTTTaGCTCTGGTTGACCCATTTAATAACCTGGAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TTFCAKYYLNNL*LWLTHLITWKK Trigger: TTTCTTCCAGGTTATTAAATGGGTCAACCAGAGCAAAAGGTTGTTGAGATAATACTTAGCGCAGAAGGTGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| 3UTR CAA 72 bp | AAATGCAATAACTCCTCATTGAAATCAACTGCCCAGTaGCAAGAAGAGTGTACCTTCTGCTTTGTTGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: KCNNSSLKSTAQ*QEECTFCFVET Trigger: TGTCTCAACAAAGCAGAAGGTACACTCTTCTTGCAACTGGGCAGTTGATTTCAATGAGGAGTTATTGCATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| 3UTR CAA 72 bp | TCTACCCAGAGTTTAACCTCAGCCCTATTCCAAATTTaGGATTCCAGTTTGAGATTCTCAATATGGGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: STQSLTSALFQI*DSSLRFSIWVQ Trigger: CTGAACCCATATTGAGAATCTCAAACTGGAATCCAAAATTTGGAATAGGGCTGAGGTTAAACTCTGGGTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| CDS-3UTR TCA 90 bp | AGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTAGTTTGGAATAAGGATAAGGATCAGGAGTaGTCCAAAATCGTCCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RALLYPGQEYLLYVVWNKDKDQE*SKIVLF Trigger: AAAAAGGACGATTTTGGATCACTCCTGATCCTTATC...CTTATTCCAAACTACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR TCA 90 bp | AGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTAGTTTGGAATAAGTTCTCCTTCAGCAATTaGTACATCATCAATGGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: RALLYPGQEYLLYVVWNKFSFSN*YIINGD Trigger: ATCGCCATTGATGATGTATCAATTGCTGAAGGAGAA...CTTATTCCAAACTACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
||
| CDS-3UTR GCA 90 bp | AGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTAGTTTGGAATAAGCATTATTATTGGCAATaGAGCTGTAAGTACCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: RALLYPGQEYLLYVVWNKHYYWQ*SCKYQR Trigger: ACGCTGGTACTTACAGCTGCATTGCCAATAATAATG...CTTATTCCAAACTACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR GCA 90 bp | AGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTAGTTTGGAATAAGCTTGTTGCAGTGCTTTaGTTTGTCCAGTCAAAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: RALLYPGQEYLLYVVWNKLVAVL*FVQSKL Trigger: TAACTTTGACTGGACAAAGCAAAGCACTGCAACAAG...CTTATTCCAAACTACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
||
| CDS-3UTR GCA 90 bp | CAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTATTCTCTATCGTTGTCTaGCCTTTCAAACGTAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: QCPFTKTLSSCQCLVNHLFSIVV*PFKRRY Trigger: ATATCTACGTTTGAAAGGGCAGACAACGATAGAGAA...TAAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
||
| CDS-3UTR GCA 90 bp | TCAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTTTCTCTATCGTTGTCTaGCCTTTCAAACGTAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: SVSIYKDSFFMPVPGESFFSIVV*PFKRRY Trigger: ATATCTACGTTTGAAAGGGCAGACAACGATAGAGAA...AAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
||
| CDS-3UTR GCA 90 bp | AGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTAGTTTGGAATAAGTCCCAGGACCTCGAATaGCTTCAAAAATTAACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RALLYPGQEYLLYVVWNKSQDLE*LQKLTE Trigger: TTCAGTTAATTTTTGAAGGCATTCGAGGTCCTGGGA...CTTATTCCAAACTACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTAAAGGATGATTGGTTTTaGTTTCCCAGTTACTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: QCPFTKTLSSCQCLVNHLKDDWF*FPSYLT Trigger: TGTCAAGTAACTGGGAAACCAAAACCAATCATCCTT...TAAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CCA 90 bp | CAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTAGACTTCATAGGCCTCTaGTTTAATAAGTTCAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QCPFTKTLSSCQCLVNHLDFIGL*FNKFSQ Trigger: TTGACTGAACTTATTAAACCAGAGGCCTATGAAGTC...TAAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
||
| CDS-3UTR CCA 90 bp | AGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTAGTTTGGAATAAGTATAAAAACCTTCTTTaGAACCACTCCGATCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RALLYPGQEYLLYVVWNKYKNLL*NHSDLH Trigger: GTGCAGATCGGAGTGGTTCCAAAGAAGGTTTTTATA...CTTATTCCAAACTACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
||
| CDS-3UTR CCA 90 bp | TCAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTATTTGTAGGTCCATATaGATTTTTGGGAGCTATGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVSIYKDSFFMPVPGESFICRSI*IFGSYA Trigger: AGCATAGCTCCCAAAAATCCATATGGACCTACAAAT...AAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTAATTTGTAGGTCCATATaGATTTTTGGGAGCTATGCT | + |
|
Preference number: 4 (lower is better) Translates to: QCPFTKTLSSCQCLVNHLICRSI*IFGSYA Trigger: AGCATAGCTCCCAAAAATCCATATGGACCTACAAAT...TAAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
||
| 3UTR CAA 72 bp | GAAGCAGTTTTATTGGAAAGTCTAAACGACACCATCTaGTCTGGAATATTACACACGTTCCTTACTGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EAVLLESLNDTI*SGILHTFLTEA Trigger: TGCTTCAGTAAGGAACGTGTGTAATATTCCAGACAAGATGGTGTCGTTTAGACTTTCCAATAAAACTGCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| 3UTR CAA 72 bp | GCTTTGCTTTGTCCAGTCAAAGTTATCCGTATCGTCTaGGGTGAACAAACAAATATTACCATCTTCAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: ALLCPVKVIRIV*GEQTNITIFKS Trigger: GGATTTGAAGATGGTAATATTTGTTTGTTCACCCAAGACGATACGGATAACTTTGACTGGACAAAGCAAAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| CDS-3UTR CCA 90 bp | AGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTAGTTTGGAATAAGCTCCATAGTTTTCATTaGAAAGACTCTTTAGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RALLYPGQEYLLYVVWNKLHSFH*KDSLVG Trigger: ACCCACTAAAGAGTCTTTCCAATGAAAACTATGGAG...CTTATTCCAAACTACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CCA 90 bp | TCAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTGATGAGGATGATAACTaGAAAAAGCCATATATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SVSIYKDSFFMPVPGESFDEDDN*KKPYMN Trigger: GTTCATATATGGCTTTTTCCAGTTATCATCCTCATC...AAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
||
| 3UTR CAA 72 bp | CAAAATGGTAAGGGGAACGTGTCATTGGGTCCAGTTTaGATAAATATAACAATGTTAGGAATGGGAAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QNGKGNVSLGPV*INITMLGMGKC Trigger: ACACTTTCCCATTCCTAACATTGTTATATTTATCAAAACTGGACCCAATGACACGTTCCCCTTACCATTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| 3UTR CAA 72 bp | TTAACCTCAGCCCTATTCCAAATTTTGGATTCCAGTTaGAGATTCTCAATATGGGTTCAGAGTAGTGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: LTSALFQILDSS*RFSIWVQSSEI Trigger: GATTTCACTACTCTGAACCCATATTGAGAATCTCAAACTGGAATCCAAAATTTGGAATAGGGCTGAGGTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| CDS-3UTR CCA 90 bp | AGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTAGTTTGGAATAAGGATGAGGATGATAACTaGAAAAAGCCATATATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RALLYPGQEYLLYVVWNKDEDDN*KKPYMN Trigger: GTTCATATATGGCTTTTTCCAGTTATCATCCTCATC...CTTATTCCAAACTACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
||
| CDS GCA 90 bp | GCGGCCAGCAAGGCGCGCTCCACTTGTGCCCGGGCCGAGTCGAGGTaGCCGGGAACTGCTAGCAATGGGAGGAAGCACTGTCCGTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: AASKARSTCARAESR*PGTASNGRKHCPSV Trigger: GACAGACGGACAGTGCTTCCTCCCATTGCTAGCAGTTCCCGGGCACCTCGACTCGGCCCGGGCACAAGTGGAGCGCGCCTTGCTGGCCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000101379.10 ENSMUST00000178814.9 |
||
| CDS CCA 90 bp | CATCTTCACGTGAACATGAACATATCCAGCCCAAGGGGGACGCAGTaGGACCTTCTGGAGGCCAGCGGCCAGCAAGGCGCGCTCCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: HLHVNMNISSPRGTQ*DLLEASGQQGALHL Trigger: CAAGTGGAGCGCGCCTTGCTGGCCGCTGGCCTCCAGAAGGTCCCACTGCGTCCCCCTTGGGCTGGATATGTTCATGTTCACGTGAAGATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000101379.10 ENSMUST00000178814.9 |
||
| CDS TCA 90 bp | GACCCTTTCGGAGTAGCGCTCCTCCTCGATATTACAGGCCAATCCTaGGTGCACAATCCGAACTGTCGGGGGAGCGTACACTCCTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: DPFGVALLLDITGQS*VHNPNCRGSVHSLA Trigger: GGCCAAGGAGTGTACGCTCCCCCGACAGTTCGGATTGTGCACTCAGGATTGGCCTGTAATATCGAGGAGGAGCGCTACTCCGAAAGGGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037181.16 ENSMUST00000101379.10 ENSMUST00000178814.9 ENSMUST00000223141.2 |
||
| CDS-3UTR CAA 90 bp | TATACTCCTGAGAGTCAAACTGTCCGGTCCGTAATAATTTATTGCCCAGACGCCCAAGGCGCGCTCCACTaGTGCCCGGGCCGAGTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: YTPESQTVRSVIIYCPDAQGALH*CPGRVE Trigger: CTCGACTCGGCCCGGGCACAAGTGGAGCGCGCCTTG...GGCGTCTGGGCAATAAATTATTACGGACCGGACAGTTTGACTCTCAGGAGTATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| CDS-3UTR CAA 90 bp | GCCACAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATCAAGGCGCGCTCCACTaGTGCCCGGGCCGAGTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: ATKAPEGLFCTQAKNIFYQGALH*CPGRVE Trigger: CTCGACTCGGCCCGGGCACAAGTGGAGCGCGCCTTG...ATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CAA 90 bp | CAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTCAAGGCGCGCTCCACTaGTGCCCGGGCCGAGTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: QKHLKGSFVPRPRISSICQGALH*CPGRVE Trigger: CTCGACTCGGCCCGGGCACAAGTGGAGCGCGCCTTG...ACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CAA 90 bp | GCCACAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATGCGCTTCCTGCTGTTTaGGTCCACCTGATCTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: ATKAPEGLFCTQAKNIFYALPAV*VHLICG Trigger: CCCACAGATCAGGTGGACCAAAACAGCAGGAAGCGC...ATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CAA 90 bp | TATTTTCACCTCACGCCCAATCTGGATGTTGTCATCTTTGTGATAAGGATCAGGGCGCTTCCTGCTGTTTaGGTCCACCTGTGGGCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: YFHLTPNLDVVIFVIRIRALPAV*VHLWAW Trigger: CCACGCCCACAGGTGGACCAAAACAGCAGGAAGCGC...CCTGATCCTTATCACAAAGATGACAACATCCAGATTGGGCGTGAGGTGAAAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101379.10 |
||
| CDS-3UTR CAA 90 bp | AGGAAAGCCCGGAATCCCAGGGCAACAATGAAGAGCCATACGAAGACAAGCAAATGTGGAACAGTCAGATaGGGTGGAACTGTACTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RKARNPRATMKSHTKTSKCGTVR*GGTVLL Trigger: CAGCAGTACAGTTCCACCCAATCTGACTGTTCCACA...TTTGCTTGTCTTCGTATGGCTCTTCATTGTTGCCCTGGGATTCCGGGCTTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| CDS-3UTR CAA 90 bp | AGGAAAGCCCGGAATCCCAGGGCAACAATGAAGAGCCATACGAAGACAAGCAAATCTCTTGGCTTCACGTaGAATCCATTGTACTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RKARNPRATMKSHTKTSKSLGFT*NPLYWL Trigger: CAGCCAGTACAATGGATTCAACGTGAAGCCAAGAGA...TTTGCTTGTCTTCGTATGGCTCTTCATTGTTGCCCTGGGATTCCGGGCTTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| CDS GCA 90 bp | CCATGGCACCAGGGACCACAGCAGACCAGTGATACATATAGTCCATaGTGGAACTTCTTAGTTGGTAGGTCTTGTTTTGCACATTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PWHQGPQQTSDTYSP*WNFLVGRSCFAHSP Trigger: AGGAGAATGTGCAAAACAAGACCTACCAACTAAGAAGTTCCAGCATGGACTATATGTATCACTGGTCTGCTGTGGTCCCTGGTGCCATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222987.2 |
||
| CDS-3UTR CAA 90 bp | CAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTAGCGCTTCCTGCTGTTTaGGTCCACCTGATCTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: QCPFTKTLSSCQCLVNHLALPAV*VHLICG Trigger: CCCACAGATCAGGTGGACCAAAACAGCAGGAAGCGC...TAAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CAA 90 bp | CAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTAGGTCAGCACTCGTATaGGATAGGCTCTCAGGACCC | + |
|
Preference number: 5 (lower is better) Translates to: QKHLKGSFVPRPRISSICRSALV*DRLSGP Trigger: GGGTCCTGAGAGCCTATCCAATACGAGTGCTGACCT...ACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS CCA 90 bp | TGGCACCAGGGACCACAGCAGACCAGTGATACATATAGTCCATGCTaGAACTTCTTAGTTGGTAGGTCTTGTTTTGCACATTCTCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: WHQGPQQTSDTYSPC*NFLVGRSCFAHSPS Trigger: TGAAGGAGAATGTGCAAAACAAGACCTACCAACTAAGAAGTTCCAGCATGGACTATATGTATCACTGGTCTGCTGTGGTCCCTGGTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222987.2 |
||
| CDS-3UTR CAA 90 bp | CACTACATGACAGTGCTGCTAATTGCAATGAAAACAGGCCCAACTCTAGAAATGCTCGGATCGACTTTATaGCTGGTGACCCCAAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: HYMTVLLIAMKTGPTLEMLGSTL*LVTPSH Trigger: ATGGCTTGGGGTCACCAGCAATAAAGTCGATCCGAG...CATTTCTAGAGTTGGGCCTGTTTTCATTGCAATTAGCAGCACTGTCATGTAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| CDS-3UTR CAA 90 bp | TCAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTAGGTCAGCACTCGTATaGGATAGGCTCTCAGGACCC | + |
|
Preference number: 5 (lower is better) Translates to: SVSIYKDSFFMPVPGESFRSALV*DRLSGP Trigger: GGGTCCTGAGAGCCTATCCAATACGAGTGCTGACCT...AAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CAA 90 bp | GCCACAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATGGGAACAGCTTCTACTaGGCAAGATATTTTCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: ATKAPEGLFCTQAKNIFYGNSFY*ARYFHL Trigger: GAGGTGAAAATATCTTGCCAAGTAGAAGCTGTTCCC...ATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTGTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CAA 90 bp | AGGAAAGCCCGGAATCCCAGGGCAACAATGAAGAGCCATACGAAGACAAGCAAATGGTTTCCCAGTTACTaGACACTGAAGTTCTATTGT | + |
|
Preference number: 5 (lower is better) Translates to: RKARNPRATMKSHTKTSKWFPSY*TLKFYC Trigger: ACAATAGAACTTCAGTGTCAAGTAACTGGGAAACCA...TTTGCTTGTCTTCGTATGGCTCTTCATTGTTGCCCTGGGATTCCGGGCTTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| CDS-3UTR CAA 90 bp | AGGAAAGCCCGGAATCCCAGGGCAACAATGAAGAGCCATACGAAGACAAGCAAATTCCTGACATTTCCCTaGAAACATTCACAATCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RKARNPRATMKSHTKTSKFLTFP*KHSQSS Trigger: TGAGGATTGTGAATGTTTCAAGGGAAATGTCAGGAA...TTTGCTTGTCTTCGTATGGCTCTTCATTGTTGCCCTGGGATTCCGGGCTTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| CDS TCA 90 bp | GTGTCTCTGAATGTTTGTAATCCTCAAAGTCTCATTGAAGACACTTaGGTCTTGGAATCTGTCAGAGGCGCTTCCTGCTGTTTTGGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VSLNVCNPQSLIEDT*VLESVRGASCCFGP Trigger: TGGACCAAAACAGCAGGAAGCGCCTCTGACAGATTCCAAGACTCAAGTGTCTTCAATGAGACTTTGAGGATTACAAACATTCAGAGACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000223141.2 |
||
| CDS-3UTR CAA 90 bp | GCCACAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATCCTCAAAGTCTCATaGAAGACACTTGAGTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ATKAPEGLFCTQAKNIFYILKVS*KTLESW Trigger: CCAAGACTCAAGTGTCTTCAATGAGACTTTGAGGAT...ATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTGTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CAA 90 bp | AGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTAGTTTGGAATAAGCTCGGATCGACTTTATaGCTGGTGACCCCAAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: RALLYPGQEYLLYVVWNKLGSTL*LVTPSH Trigger: ATGGCTTGGGGTCACCAGCAATAAAGTCGATCCGAG...CTTATTCCAAACTACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CAA 90 bp | GCCACAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATGGAGAAGCAGTTTTATaGGAAAGTCTAAACGACACC | + |
|
Preference number: 5 (lower is better) Translates to: ATKAPEGLFCTQAKNIFYGEAVL*ESLNDT Trigger: GGTGTCGTTTAGACTTTCCAATAAAACTGCTTCTCC...ATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTGTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CAA 90 bp | TTTAGAATAAAGCCAGATTGTTTTCAGGCCCAGTTCCGCGGCAGAGTTTGTATGGGGAACAGCTTCTACTaGGCAAGATATTTTCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: FRIKPDCFQAQFRGRVCMGNSFY*ARYFHL Trigger: GAGGTGAAAATATCTTGCCAAGTAGAAGCTGTTCCC...CATACAAACTCTGCCGCGGAACTGGGCCTGAAAACAATCTGGCTTTATTCTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| CDS-3UTR CAA 90 bp | GCCACAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATAACTTTCCATTTGCATaGTCCCATCAGGCATTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: ATKAPEGLFCTQAKNIFYNFPFA*SHQALQ Trigger: TTGCAATGCCTGATGGGACAATGCAAATGGAAAGTT...ATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTGTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CAA 90 bp | CAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTTTCACGTTGAATCCATaGTACTGGCTGGTCTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: QKHLKGSFVPRPRISSICFTLNP*YWLVWH Trigger: ATGCCAGACCAGCCAGTACAATGGATTCAACGTGAA...ACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CAA 90 bp | GCCACAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATGGTCCATATGGATTTTaGGGAGCTATGCTGAATACA | + |
|
Preference number: 5 (lower is better) Translates to: ATKAPEGLFCTQAKNIFYGPYGF*GAMLNT Trigger: TGTATTCAGCATAGCTCCCAAAAATCCATATGGACC...ATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTGTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
||
| CDS-3UTR CAA 90 bp | CAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTGCGGATTCTCTATCGTaGTCTGCCCTTTCAAACGTA | + |
|
Preference number: 5 (lower is better) Translates to: QKHLKGSFVPRPRISSICADSLS*SALSNV Trigger: TACGTTTGAAAGGGCAGACAACGATAGAGAATCCGC...ACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
||
| CDS-3UTR CAA 90 bp | GCCACAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATTTGGTAGGTCTTGTTTaGCACATTCTCCTTCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: ATKAPEGLFCTQAKNIFYLVGLV*HILLQQ Trigger: TTGCTGAAGGAGAATGTGCAAAACAAGACCTACCAA...ATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTGTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
||
| CDS-3UTR CAA 90 bp | AGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTAGTTTGGAATAAGTGTGGAACAGTCAGATaGGGTGGAACTGTACTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RALLYPGQEYLLYVVWNKCGTVR*GGTVLL Trigger: CAGCAGTACAGTTCCACCCAATCTGACTGTTCCACA...CTTATTCCAAACTACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CAA 90 bp | CACTACATGACAGTGCTGCTAATTGCAATGAAAACAGGCCCAACTCTAGAAATGTTGTCCCATCAGGCATaGCAACTTCTTTATCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: HYMTVLLIAMKTGPTLEMLSHQA*QLLYLL Trigger: GAGCAGATAAAGAAGTTGCAATGCCTGATGGGACAA...CATTTCTAGAGTTGGGCCTGTTTTCATTGCAATTAGCAGCACTGTCATGTAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| CDS-3UTR CAA 90 bp | GCCACAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATCATAACTTTCCATTaGCATTGTCCCATCAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: ATKAPEGLFCTQAKNIFYIITFH*HCPIRH Trigger: ATGCCTGATGGGACAATGCAAATGGAAAGTTATGAT...ATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTGTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CAA 90 bp | CAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTATCTCTTGGCTTCACGTaGAATCCATTGTACTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QCPFTKTLSSCQCLVNHLSLGFT*NPLYWL Trigger: CAGCCAGTACAATGGATTCAACGTGAAGCCAAGAGA...TAAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CAA 90 bp | CAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTAACTTCTGTCCTGTCCTaGACGGATTTCCAAGAATGC | + |
|
Preference number: 5 (lower is better) Translates to: QCPFTKTLSSCQCLVNHLTSVLS*TDFQEC Trigger: GCATTCTTGGAAATCCGTCAAGGACAGGACAGAAGT...TAAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CAA 90 bp | TCAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTACTTCTGTCCTGTCCTaGACGGATTTCCAAGAATGC | + |
|
Preference number: 5 (lower is better) Translates to: SVSIYKDSFFMPVPGESFTSVLS*TDFQEC Trigger: GCATTCTTGGAAATCCGTCAAGGACAGGACAGAAGT...AAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
||
| CDS-3UTR CAA 90 bp | CAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTAGCGGATTCTCTATCGTaGTCTGCCCTTTCAAACGTA | + |
|
Preference number: 5 (lower is better) Translates to: QCPFTKTLSSCQCLVNHLADSLS*SALSNV Trigger: TACGTTTGAAAGGGCAGACAACGATAGAGAATCCGC...TAAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
||
| CDS-3UTR CAA 90 bp | TTTAGAATAAAGCCAGATTGTTTTCAGGCCCAGTTCCGCGGCAGAGTTTGTATGTTGGTAGGTCTTGTTTaGCACATTCTCCTTCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: FRIKPDCFQAQFRGRVCMLVGLV*HILLQQ Trigger: TTGCTGAAGGAGAATGTGCAAAACAAGACCTACCAA...CATACAAACTCTGCCGCGGAACTGGGCCTGAAAACAATCTGGCTTTATTCTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
||
| CDS-3UTR CAA 90 bp | CACTACATGACAGTGCTGCTAATTGCAATGAAAACAGGCCCAACTCTAGAAATGCTAAACGACACCATCTaGTCTGGAATATTACACACG | + |
|
Preference number: 5 (lower is better) Translates to: HYMTVLLIAMKTGPTLEMLNDTI*SGILHT Trigger: CGTGTGTAATATTCCAGACAAGATGGTGTCGTTTAG...CATTTCTAGAGTTGGGCCTGTTTTCATTGCAATTAGCAGCACTGTCATGTAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
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| CDS-3UTR CAA 90 bp | TCAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTTTGTCCCATCAGGCATaGCAACTTCTTTATCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SVSIYKDSFFMPVPGESFLSHQA*QLLYLL Trigger: GAGCAGATAAAGAAGTTGCAATGCCTGATGGGACAA...AAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
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| CDS-3UTR CAA 90 bp | AGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTAGTTTGGAATAAGTTCACGTTGAATCCATaGTACTGGCTGGTCTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: RALLYPGQEYLLYVVWNKFTLNP*YWLVWH Trigger: ATGCCAGACCAGCCAGTACAATGGATTCAACGTGAA...CTTATTCCAAACTACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
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| CDS-3UTR CAA 90 bp | TCAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTTTGCAGTGCTTTGCTTaGTCCAGTCAAAGTTATCCG | + |
|
Preference number: 5 (lower is better) Translates to: SVSIYKDSFFMPVPGESFLQCFA*SSQSYP Trigger: CGGATAACTTTGACTGGACAAAGCAAAGCACTGCAA...AAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
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| CDS-3UTR CAA 90 bp | CAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTATTTTGTGTTCCTTGTaGCAGTGCTTTGCTTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: QKHLKGSFVPRPRISSICILCSL*QCFALS Trigger: GGACAAAGCAAAGCACTGCAACAAGGAACACAAAAT...ACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
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| CDS-3UTR CAA 90 bp | CAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTGGTCCATATGGATTTTaGGGAGCTATGCTGAATACA | + |
|
Preference number: 5 (lower is better) Translates to: QKHLKGSFVPRPRISSICGPYGF*GAMLNT Trigger: TGTATTCAGCATAGCTCCCAAAAATCCATATGGACC...ACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
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| CDS-3UTR CAA 90 bp | CAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTACTAAACGACACCATCTaGTCTGGAATATTACACACG | + |
|
Preference number: 5 (lower is better) Translates to: QCPFTKTLSSCQCLVNHLLNDTI*SGILHT Trigger: CGTGTGTAATATTCCAGACAAGATGGTGTCGTTTAG...TAAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
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| CDS-3UTR CAA 90 bp | CAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTAGGAGAAGCAGTTTTATaGGAAAGTCTAAACGACACC | + |
|
Preference number: 5 (lower is better) Translates to: QCPFTKTLSSCQCLVNHLGEAVL*ESLNDT Trigger: GGTGTCGTTTAGACTTTCCAATAAAACTGCTTCTCC...TAAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
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| CDS-3UTR CAA 90 bp | CAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTTTCCTGACATTTCCCTaGAAACATTCACAATCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QKHLKGSFVPRPRISSICFLTFP*KHSQSS Trigger: TGAGGATTGTGAATGTTTCAAGGGAAATGTCAGGAA...ACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
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| CDS-3UTR CAA 90 bp | TTTAGAATAAAGCCAGATTGTTTTCAGGCCCAGTTCCGCGGCAGAGTTTGTATGGTTATCCGTATCGTCTaGGGTGAACAAACAAATATT | + |
|
Preference number: 5 (lower is better) Translates to: FRIKPDCFQAQFRGRVCMVIRIV*GEQTNI Trigger: AATATTTGTTTGTTCACCCAAGACGATACGGATAAC...CATACAAACTCTGCCGCGGAACTGGGCCTGAAAACAATCTGGCTTTATTCTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
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| CDS-3UTR CAA 90 bp | AGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTAGTTTGGAATAAGTTGCAGTGCTTTGCTTaGTCCAGTCAAAGTTATCCG | + |
|
Preference number: 5 (lower is better) Translates to: RALLYPGQEYLLYVVWNKLQCFA*SSQSYP Trigger: CGGATAACTTTGACTGGACAAAGCAAAGCACTGCAA...CTTATTCCAAACTACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
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| CDS-3UTR CAA 90 bp | CAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTAATTTTGTGTTCCTTGTaGCAGTGCTTTGCTTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: QCPFTKTLSSCQCLVNHLILCSL*QCFALS Trigger: GGACAAAGCAAAGCACTGCAACAAGGAACACAAAAT...TAAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
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| CDS-3UTR CAA 90 bp | TCAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTATTTTGTGTTCCTTGTaGCAGTGCTTTGCTTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SVSIYKDSFFMPVPGESFILCSL*QCFALS Trigger: GGACAAAGCAAAGCACTGCAACAAGGAACACAAAAT...AAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
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| CDS-3UTR CAA 90 bp | TCAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTGGTCCATATGGATTTTaGGGAGCTATGCTGAATACA | + |
|
Preference number: 5 (lower is better) Translates to: SVSIYKDSFFMPVPGESFGPYGF*GAMLNT Trigger: TGTATTCAGCATAGCTCCCAAAAATCCATATGGACC...AAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
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| CDS-3UTR CAA 90 bp | CAAAAGCACCTGAAGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTATTCTCCTTCAGCAATaGATACATCATCAATGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: QKHLKGSFVPRPRISSICILLQQ*IHHQWR Trigger: TCGCCATTGATGATGTATCAATTGCTGAAGGAGAAT...ACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
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| CDS-3UTR CAA 90 bp | AGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTAGTTTGGAATAAGATCCTCAAAGTCTCATaGAAGACACTTGAGTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RALLYPGQEYLLYVVWNKILKVS*KTLESW Trigger: CCAAGACTCAAGTGTCTTCAATGAGACTTTGAGGAT...CTTATTCCAAACTACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
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| CDS-3UTR CAA 90 bp | CAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTAAGCTTCACCTATACTTaGATGAACAGTTACTACTGG | + |
|
Preference number: 5 (lower is better) Translates to: QCPFTKTLSSCQCLVNHLSFTYT*MNSYYW Trigger: CCAGTAGTAACTGTTCATCAAAGTATAGGTGAAGCT...TAAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
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| CDS-3UTR CAA 90 bp | CAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTATGGTTTCCCAGTTACTaGACACTGAAGTTCTATTGT | + |
|
Preference number: 5 (lower is better) Translates to: QCPFTKTLSSCQCLVNHLWFPSY*TLKFYC Trigger: ACAATAGAACTTCAGTGTCAAGTAACTGGGAAACCA...TAAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
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| CDS-3UTR CAA 90 bp | AGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTAGTTTGGAATAAGAACTTTCCATTTGCATaGTCCCATCAGGCATTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: RALLYPGQEYLLYVVWNKNFPFA*SHQALQ Trigger: TTGCAATGCCTGATGGGACAATGCAAATGGAAAGTT...CTTATTCCAAACTACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
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| CDS-3UTR CAA 90 bp | CAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTAATTCTCCTTCAGCAATaGATACATCATCAATGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: QCPFTKTLSSCQCLVNHLILLQQ*IHHQWR Trigger: TCGCCATTGATGATGTATCAATTGCTGAAGGAGAAT...TAAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
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| CDS-3UTR CAA 90 bp | AGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTAGTTTGGAATAAGTTGGTAGGTCTTGTTTaGCACATTCTCCTTCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: RALLYPGQEYLLYVVWNKLVGLV*HILLQQ Trigger: TTGCTGAAGGAGAATGTGCAAAACAAGACCTACCAA...CTTATTCCAAACTACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
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| CDS-3UTR CAA 90 bp | AGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTAGTTTGGAATAAGAGCTTCACCTATACTTaGATGAACAGTTACTACTGG | + |
|
Preference number: 5 (lower is better) Translates to: RALLYPGQEYLLYVVWNKSFTYT*MNSYYW Trigger: CCAGTAGTAACTGTTCATCAAAGTATAGGTGAAGCT...CTTATTCCAAACTACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
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| CDS-3UTR CAA 90 bp | AGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTAGTTTGGAATAAGATCATAACTTTCCATTaGCATTGTCCCATCAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: RALLYPGQEYLLYVVWNKIITFH*HCPIRH Trigger: ATGCCTGATGGGACAATGCAAATGGAAAGTTATGAT...CTTATTCCAAACTACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 |
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| CDS-3UTR CAA 90 bp | TCAGTGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCATTTGTTATCCGTATCGTCTaGGGTGAACAAACAAATATT | + |
|
Preference number: 5 (lower is better) Translates to: SVSIYKDSFFMPVPGESFVIRIV*GEQTNI Trigger: AATATTTGTTTGTTCACCCAAGACGATACGGATAAC...AAATGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACACTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
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| CDS-3UTR CAA 90 bp | AGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTAGTTTGGAATAAGATTCTCCTTCAGCAATaGATACATCATCAATGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: RALLYPGQEYLLYVVWNKILLQQ*IHHQWR Trigger: TCGCCATTGATGATGTATCAATTGCTGAAGGAGAAT...CTTATTCCAAACTACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
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| CDS-3UTR CAA 90 bp | AGGGCTCTTTTGTACCCAGGCCAAGAATATCTTCTATATGTAGTTTGGAATAAGGTTATCCGTATCGTCTaGGGTGAACAAACAAATATT | + |
|
Preference number: 5 (lower is better) Translates to: RALLYPGQEYLLYVVWNKVIRIV*GEQTNI Trigger: AATATTTGTTTGTTCACCCAAGACGATACGGATAAC...CTTATTCCAAACTACATATAGAAGATATTCTTGGCCTGGGTACAAAAGAGCCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000222623.2 |
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| CDS TCA 90 bp | AAATCCACAGTGAAATTCCCCTGTATATTTAATTACACGAATTGTTaGATCTCCTTCACCAAATTTAGTGAGAGGAGTCAATCGGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: KSTVKFPCIFNYTNC*ISFTKFSERSQSDF Trigger: GAAGTCCGATTGACTCCTCTCACTAAATTTGGTGAAGGAGATTCAACAATTCGTGTAATTAAATATACAGGGGAATTTCACTGTGGATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178814.9 ENSMUST00000223141.2 |
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| CDS CAA 72 bp | CTTCTGGAGGCCAGCGGCCAGCAAGGCGCGCTCCACTaGTGCCCGGGCCGAGTCGAGGTGCCCGGGAACTGC | + |
|
Preference number: 6 (lower is better) Translates to: LLEASGQQGALH*CPGRVEVPGNC Trigger: GCAGTTCCCGGGCACCTCGACTCGGCCCGGGCACAAGTGGAGCGCGCCTTGCTGGCCGCTGGCCTCCAGAAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000101379.10 ENSMUST00000178814.9 |
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| CDS TCA 72 bp | AAGCACTGTCCGTCTGTCCTTCCCTGGCGGCGGCCGTaGGCGGAGCGCTGGAGCCCCACACACCCCACACTC | + |
|
Preference number: 6 (lower is better) Translates to: KHCPSVLPWRRP*AERWSPTHPTL Trigger: GAGTGTGGGGTGTGTGGGGCTCCAGCGCTCCGCTCACGGCCGCCGCCAGGGAAGGACAGACGGACAGTGCTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037181.16 |
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| CDS GCA 72 bp | AAGGCGCGCTCCACTTGTGCCCGGGCCGAGTCGAGGTaGCCGGGAACTGCTAGCAATGGGAGGAAGCACTGT | + |
|
Preference number: 6 (lower is better) Translates to: KARSTCARAESR*PGTASNGRKHC Trigger: ACAGTGCTTCCTCCCATTGCTAGCAGTTCCCGGGCACCTCGACTCGGCCCGGGCACAAGTGGAGCGCGCCTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000101379.10 ENSMUST00000178814.9 |
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| CDS CCA 72 bp | ACATATCCAGCCCAAGGGGGACGCAGTGGGACCTTCTaGAGGCCAGCGGCCAGCAAGGCGCGCTCCACTTGT | + |
|
Preference number: 6 (lower is better) Translates to: TYPAQGGRSGTF*RPAASKARSTC Trigger: ACAAGTGGAGCGCGCCTTGCTGGCCGCTGGCCTCCAGAAGGTCCCACTGCGTCCCCCTTGGGCTGGATATGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000101379.10 ENSMUST00000178814.9 |
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| CDS CCA 72 bp | GTGAACATGAACATATCCAGCCCAAGGGGGACGCAGTaGGACCTTCTGGAGGCCAGCGGCCAGCAAGGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: VNMNISSPRGTQ*DLLEASGQQGA Trigger: CGCGCCTTGCTGGCCGCTGGCCTCCAGAAGGTCCCACTGCGTCCCCCTTGGGCTGGATATGTTCATGTTCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000101379.10 ENSMUST00000178814.9 |
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| CDS CCA 72 bp | TGCACAATCCGAACTGTCGGGGGAGCGTACACTCCTTaGCCAGAGATTCCCTCCAGGAGGACTGTCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: CTIRTVGGAYTP*PEIPSRRTVSS Trigger: GCTGCTGACAGTCCTCCTGGAGGGAATCTCTGGCCAAGGAGTGTACGCTCCCCCGACAGTTCGGATTGTGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037181.16 ENSMUST00000101379.10 ENSMUST00000178814.9 ENSMUST00000223141.2 |
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| CDS TCA 72 bp | GGAGTAGCGCTCCTCCTCGATATTACAGGCCAATCCTaGGTGCACAATCCGAACTGTCGGGGGAGCGTACAC | + |
|
Preference number: 6 (lower is better) Translates to: GVALLLDITGQS*VHNPNCRGSVH Trigger: GTGTACGCTCCCCCGACAGTTCGGATTGTGCACTCAGGATTGGCCTGTAATATCGAGGAGGAGCGCTACTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037181.16 ENSMUST00000101379.10 ENSMUST00000178814.9 ENSMUST00000223141.2 |
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| CDS CCA 72 bp | AGAGGCGCTTCCTGCTGTTTTGGTCCACCTGATCTGTaGGCGTGGATGTCCAGTAACCAGGCAGGTCAATTC | + |
|
Preference number: 6 (lower is better) Translates to: RGASCCFGPPDL*AWMSSNQAGQF Trigger: GAATTGACCTGCCTGGTTACTGGACATCCACGCCCACAGATCAGGTGGACCAAAACAGCAGGAAGCGCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000223141.2 |
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| CDS CCA 72 bp | CCAGGCAGGTCAATTCTAGAGTTTCTCCTTCCCGGATaGTATAGACCCTTTCGGAGTAGCGCTCCTCCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: PGRSILEFLLPG*YRPFRSSAPPR Trigger: TCGAGGAGGAGCGCTACTCCGAAAGGGTCTATACCATCCGGGAAGGAGAAACTCTAGAATTGACCTGCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037181.16 ENSMUST00000101379.10 ENSMUST00000178814.9 ENSMUST00000223141.2 |
||
| CDS CAA 72 bp | GAGTCTTGGAATCTGTCAGAGGCGCTTCCTGCTGTTTaGGTCCACCTGATCTGTGGGCGTGGATGTCCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: ESWNLSEALPAV*VHLICGRGCPV Trigger: TACTGGACATCCACGCCCACAGATCAGGTGGACCAAAACAGCAGGAAGCGCCTCTGACAGATTCCAAGACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000223141.2 |
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| CDS CAA 90 bp | AAGACACTTGAGTCTTGGAATCTGTCAGAGGCGCTTCCTGCTGTTTaGGTCCACCTGATCTGTGGGCGTGGATGTCCAGTAACCAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: KTLESWNLSEALPAV*VHLICGRGCPVTRQ Trigger: CTGCCTGGTTACTGGACATCCACGCCCACAGATCAGGTGGACCAAAACAGCAGGAAGCGCCTCTGACAGATTCCAAGACTCAAGTGTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000223141.2 |
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| CDS GCA 72 bp | CAGGGACCACAGCAGACCAGTGATACATATAGTCCATaGTGGAACTTCTTAGTTGGTAGGTCTTGTTTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: QGPQQTSDTYSP*WNFLVGRSCFA Trigger: TGCAAAACAAGACCTACCAACTAAGAAGTTCCAGCATGGACTATATGTATCACTGGTCTGCTGTGGTCCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222987.2 |
||
| CDS TCA 72 bp | AATGTTTGTAATCCTCAAAGTCTCATTGAAGACACTTaGGTCTTGGAATCTGTCAGAGGCGCTTCCTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: NVCNPQSLIEDT*VLESVRGASCC Trigger: ACAGCAGGAAGCGCCTCTGACAGATTCCAAGACTCAAGTGTCTTCAATGAGACTTTGAGGATTACAAACATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037181.16 ENSMUST00000178814.9 ENSMUST00000223141.2 |
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