Pregenerated sensors for MDFIC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041390Ensembl transcript IDs: ENSMUST00000101663.10, ENSMUST00000120512.8, ENSMUST00000125326.8, ENSMUST00000128849.3, ENSMUST00000140516.8, ENSMUST00000189359.7, ENSMUST00000190255.7
Found 279 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGTTGAGGCAGACGTTCAGGTTGGGTTCTGACAAGTTCACCAGCTaGAGGATTTGGCCAAATGGACTGGTCCCGCATCAGCCCACACCT | + |
|
Preference number: 1 (lower is better) Translates to: ELRQTFRLGSDKFTS*RIWPNGLVPHQPTP Trigger: AGGTGTGGGCTGATGCGGGACCAGTCCATTTGGCCAAATCCTTCAGCTGGTGAACTTGTCAGAACCCAACCTGAACGTCTGCCTCAACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR TCA 90 bp | CCTGTGCTGATGTCTGGAGTTGAGGCAGACGTTCAGGTTGGGTTCTaGCAAGTTCACCAGCTGAAGGATTTGGCCAAATGGACTGGTCCC | + |
|
Preference number: 1 (lower is better) Translates to: PVLMSGVEADVQVGF*QVHQLKDLAKWTGP Trigger: GGGACCAGTCCATTTGGCCAAATCCTTCAGCTGGTGAACTTGTCAGAACCCAACCTGAACGTCTGCCTCAACTCCAGACATCAGCACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR TCA 90 bp | TTGCCTGTTTCCTCCTTGCCGGGTTCCTGTGCTGATGTCTGGAGTTaGGGCAGACGTTCAGGTTGGGTTCTGACAAGTTCACCAGCTGAA | + |
|
Preference number: 1 (lower is better) Translates to: LPVSSLPGSCADVWS*GRRSGWVLTSSPAE Trigger: TTCAGCTGGTGAACTTGTCAGAACCCAACCTGAACGTCTGCCTCAACTCCAGACATCAGCACAGGAACCCGGCAAGGAGGAAACAGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR CCA 90 bp | CCTGCCGCTCTGGATGAGAGCAATGTGATCTTCTTCAGAGCACTCTaGCAGAACAAGAGAGCTGAAAAGCCCAGAGGAGACCAACACGGA | + |
|
Preference number: 1 (lower is better) Translates to: PAALDESNVIFFRAL*QNKRAEKPRGDQHG Trigger: TCCGTGTTGGTCTCCTCTGGGCTTTTCAGCTCTCTTGTTCTGCCAGAGTGCTCTGAAGAAGATCACATTGCTCTCATCCAGAGCGGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR CCA 90 bp | GCAGGGCTGGAGTGGGTGAGTGCTATGTGCTGGCAGCAAGGGAACTaGAAGATGGCTCACAAAGTAGATACCCATCACCTAGTCCATTCT | + |
|
Preference number: 1 (lower is better) Translates to: AGLEWVSAMCWQQGN*KMAHKVDTHHLVHS Trigger: AGAATGGACTAGGTGATGGGTATCTACTTTGTGAGCCATCTTCCAGTTCCCTTGCTGCCAGCACATAGCACTCACCCACTCCAGCCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125326.8 ENSMUST00000140516.8 |
||
| 3UTR CCA 90 bp | GGATTTGGCCAAATGGACTGGTCCCGCATCAGCCCACACCTGGTATaGCCACTGGTAGCTGGCCTTTTATCTTTCTCCGTATTGTCCTCA | + |
|
Preference number: 1 (lower is better) Translates to: GFGQMDWSRISPHLV*PLVAGLLSFSVLSS Trigger: TGAGGACAATACGGAGAAAGATAAAAGGCCAGCTACCAGTGGCCATACCAGGTGTGGGCTGATGCGGGACCAGTCCATTTGGCCAAATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR TCA 90 bp | GCCATTCTTTATCTTGCCTGTTTCCTCCTTGCCGGGTTCCTGTGCTaGTGTCTGGAGTTGAGGCAGACGTTCAGGTTGGGTTCTGACAAG | + |
|
Preference number: 1 (lower is better) Translates to: AILYLACFLLAGFLC*CLELRQTFRLGSDK Trigger: CTTGTCAGAACCCAACCTGAACGTCTGCCTCAACTCCAGACATCAGCACAGGAACCCGGCAAGGAGGAAACAGGCAAGATAAAGAATGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR TCA 90 bp | AGCTCCCATCCTGCTTGCTTCCATTACACTTCCTGCCGCTCTGGATaGGAGCAATGTGATCTTCTTCAGAGCACTCTGGCAGAACAAGAG | + |
|
Preference number: 1 (lower is better) Translates to: SSHPACFHYTSCRSG*EQCDLLQSTLAEQE Trigger: CTCTTGTTCTGCCAGAGTGCTCTGAAGAAGATCACATTGCTCTCATCCAGAGCGGCAGGAAGTGTAATGGAAGCAAGCAGGATGGGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR TCA 90 bp | CACGGGAGGGTGTGTGTGAATCCAAACTCTCCCCTCCACATGAGCTaGCTCCATCACTGTAGAATTAGTCTCATTGCAGCCCCTCTTCTT | + |
|
Preference number: 1 (lower is better) Translates to: HGRVCVNPNSPLHMS*LHHCRISLIAAPLL Trigger: AAGAAGAGGGGCTGCAATGAGACTAATTCTACAGTGATGGAGTCAGCTCATGTGGAGGGGAGAGTTTGGATTCACACACACCCTCCCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR GCA 90 bp | TTCCATTCCCATTGCTCATCCTTGTGTGGCCGCCATTCTTTATCTTaGCTGTTTCCTCCTTGCCGGGTTCCTGTGCTGATGTCTGGAGTT | + |
|
Preference number: 1 (lower is better) Translates to: FHSHCSSLCGRHSLS*LFPPCRVPVLMSGV Trigger: AACTCCAGACATCAGCACAGGAACCCGGCAAGGAGGAAACAGGCAAGATAAAGAATGGCGGCCACACAAGGATGAGCAATGGGAATGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR TCA 90 bp | CAAGCTGGACTGGATTTTTCTGTGCATCTTCTGAGAAACGGGGGCTaGTATCTTGTGATTCTCCACGGACACATGTTTGGCTCCGTGAGG | + |
|
Preference number: 1 (lower is better) Translates to: QAGLDFSVHLLRNGG*YLVILHGHMFGSVR Trigger: CCTCACGGAGCCAAACATGTGTCCGTGGAGAATCACAAGATATCAGCCCCCGTTTCTCAGAAGATGCACAGAAAAATCCAGTCCAGCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR GCA 90 bp | TCTCCACGGACACATGTTTGGCTCCGTGAGGAATTCCATTCCCATTaGTCATCCTTGTGTGGCCGCCATTCTTTATCTTGCCTGTTTCCT | + |
|
Preference number: 1 (lower is better) Translates to: SPRTHVWLREEFHSH*SSLCGRHSLSCLFP Trigger: AGGAAACAGGCAAGATAAAGAATGGCGGCCACACAAGGATGAGCAATGGGAATGGAATTCCTCACGGAGCCAAACATGTGTCCGTGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR TCA 90 bp | GTTCCTATGGCCTCTTGCCTTTACAGTCTTGAAGCCAGCATGCTTTaGAACCTGGTTCATCCTTTACAGCTCCCATCCTGCTTGCTTCCA | + |
|
Preference number: 1 (lower is better) Translates to: VPMASCLYSLEASML*NLVHPLQLPSCLLP Trigger: TGGAAGCAAGCAGGATGGGAGCTGTAAAGGATGAACCAGGTTTCAAAGCATGCTGGCTTCAAGACTGTAAAGGCAAGAGGCCATAGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR GCA 90 bp | CTCTTCACTCTCTTGCTGGCCCAGTCAGGTCAGTTTCTGGAATCTTaGTGGATACACACCATTCGTCATCCTCAAATTCCACTGCTGAAG | + |
|
Preference number: 1 (lower is better) Translates to: LFTLLLAQSGQFLES*WIHTIRHPQIPLLK Trigger: CTTCAGCAGTGGAATTTGAGGATGACGAATGGTGTGTATCCAGCAAGATTCCAGAAACTGACCTGACTGGGCCAGCAAGAGAGTGAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR CCA 90 bp | TTCACTCTCTTGCTGGCCCAGTCAGGTCAGTTTCTGGAATCTTGCTaGATACACACCATTCGTCATCCTCAAATTCCACTGCTGAAGCAT | + |
|
Preference number: 1 (lower is better) Translates to: FTLLLAQSGQFLESC*IHTIRHPQIPLLKH Trigger: ATGCTTCAGCAGTGGAATTTGAGGATGACGAATGGTGTGTATCCAGCAAGATTCCAGAAACTGACCTGACTGGGCCAGCAAGAGAGTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR GCA 90 bp | AAATGCAAGCAGGTAATCTTATCTCTACTGCACAGAGTAACATGTTaGACCAAGGAGGGAAAGAATAGAGGCACTGTGATACGCCCCCAA | + |
|
Preference number: 1 (lower is better) Translates to: KCKQVILSLLHRVTC*TKEGKNRGTVIRPQ Trigger: TTGGGGGCGTATCACAGTGCCTCTATTCTTTCCCTCCTTGGTGCAACATGTTACTCTGTGCAGTAGAGATAAGATTACCTGCTTGCATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000125326.8 ENSMUST00000140516.8 |
||
| 3UTR GCA 90 bp | AGAAGAAAACCATGGGAGAGAGCTACGTGTTTCATTCATACACATTaGCTTTTCTCCTCTGTGTTTCTTCCAAAGCTGCATCCTTGCATT | + |
|
Preference number: 1 (lower is better) Translates to: RRKPWERATCFIHTH*LFSSVFLPKLHPCI Trigger: AATGCAAGGATGCAGCTTTGGAAGAAACACAGAGGAGAAAAGGCAATGTGTATGAATGAAACACGTAGCTCTCTCCCATGGTTTTCTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| 3UTR TCA 90 bp | CTCGTAACAAAATTCCCCATTTATTTACAGTCCAATCTATCACTGTaGGGAGGCATAGCTAACTTTACAGAGGCTTTCCTGAGCCTATTC | + |
|
Preference number: 1 (lower is better) Translates to: LVTKFPIYLQSNLSL*GGIANFTEAFLSLF Trigger: GAATAGGCTCAGGAAAGCCTCTGTAAAGTTAGCTATGCCTCCTCACAGTGATAGATTGGACTGTAAATAAATGGGGAATTTTGTTACGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| 3UTR TCA 90 bp | GAGGTGAAAAATCCCTGCGTTATGATGAGACTTTTCAGCAAGCTCTaGAATGAATTCCTTCAAGAGGAAGGTCCTATAGCCAAACATTCA | + |
|
Preference number: 1 (lower is better) Translates to: EVKNPCVMMRLFSKL*NEFLQEEGPIAKHS Trigger: TGAATGTTTGGCTATAGGACCTTCCTCTTGAAGGAATTCATTTCAGAGCTTGCTGAAAAGTCTCATCATAACGCAGGGATTTTTCACCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR TCA 90 bp | TGCCATTTCATTATCCATTCAAAACCCAGACAATTGTACTCTAGTTaGCAACATCCGAGGAAATCTGAGGTGAAAAATCCCTGCGTTATG | + |
|
Preference number: 1 (lower is better) Translates to: CHFIIHSKPRQLYSS*QHPRKSEVKNPCVM Trigger: CATAACGCAGGGATTTTTCACCTCAGATTTCCTCGGATGTTGTCAACTAGAGTACAATTGTCTGGGTTTTGAATGGATAATGAAATGGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR TCA 90 bp | ATTATACAAGATGCCTTAAGGAATGGCTTGCCTGGAGTAGAGAGCTaGAGAATAGTCCTACCTGTACAAGTATGGAAATTAAATTCTGGT | + |
|
Preference number: 1 (lower is better) Translates to: IIQDALRNGLPGVES*RIVLPVQVWKLNSG Trigger: ACCAGAATTTAATTTCCATACTTGTACAGGTAGGACTATTCTTCAGCTCTCTACTCCAGGCAAGCCATTCCTTAAGGCATCTTGTATAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR TCA 90 bp | GAAAAATCCCTGCGTTATGATGAGACTTTTCAGCAAGCTCTGAAATaGATTCCTTCAAGAGGAAGGTCCTATAGCCAAACATTCAAAGAT | + |
|
Preference number: 1 (lower is better) Translates to: EKSLRYDETFQQALK*IPSRGRSYSQTFKD Trigger: ATCTTTGAATGTTTGGCTATAGGACCTTCCTCTTGAAGGAATTCATTTCAGAGCTTGCTGAAAAGTCTCATCATAACGCAGGGATTTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR GCA 90 bp | TGGCTTAAATACATACTGAGCAATGTTGTGTTTAGAGCAAAGAGCTaGTCAGAATGGTTAGCGAAAACAGACATGTCAAGAGAAAGAAGA | + |
|
Preference number: 1 (lower is better) Translates to: WLKYILSNVVFRAKS*SEWLAKTDMSRERR Trigger: TCTTCTTTCTCTTGACATGTCTGTTTTCGCTAACCATTCTGAGCAGCTCTTTGCTCTAAACACAACATTGCTCAGTATGTATTTAAGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR GCA 90 bp | CTATCCCTCCCTATATCCTCTATCTATAAAACTTGTCTCCTACAATaGCATTTCATTATCCATTCAAAACCCAGACAATTGTACTCTAGT | + |
|
Preference number: 1 (lower is better) Translates to: LSLPISSIYKTCLLQ*HFIIHSKPRQLYSS Trigger: ACTAGAGTACAATTGTCTGGGTTTTGAATGGATAATGAAATGGCATTGTAGGAGACAAGTTTTATAGATAGAGGATATAGGGAGGGATAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR TCA 90 bp | GAAAGAATTAATATATTGCTAATACACAGTGATTCATTGCAAAGATaGCCAGCTTGCACTGACCCAGTATGGAAAACACTTTTAGGGATA | + |
|
Preference number: 1 (lower is better) Translates to: ERINILLIHSDSLQR*PACTDPVWKTLLGI Trigger: TATCCCTAAAAGTGTTTTCCATACTGGGTCAGTGCAAGCTGGTCATCTTTGCAATGAATCACTGTGTATTAGCAATATATTAATTCTTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| 3UTR-3UTR TCA 90 bp | CCATTCTTTATCTTGCCTGTTTCCTCCTTGCCGGGTTCCTGTGCTGATGTCTGGCAGGGCTGGAGTGGGTaGGTGCTATGTGCTGGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: PFFILPVSSLPGSCADVWQGWSG*VLCAGS Trigger: GCTGCCAGCACATAGCACTCACCCACTCCAGCCCTG...CCAGACATCAGCACAGGAACCCGGCAAGGAGGAAACAGGCAAGATAAAGAATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR CAA 90 bp | GGTCACAGAGCATTGGCAAGTGTTTCTGAGAGCGGAGTAAAAGGATaGGGCAGGGCTGGAGTGGGTGAGTGCTATGTGCTGGCAGCAAGG | + |
|
Preference number: 2 (lower is better) Translates to: GHRALASVSESGVKG*GRAGVGECYVLAAR Trigger: CCTTGCTGCCAGCACATAGCACTCACCCACTCCAGCCCTGCCCAATCCTTTTACTCCGCTCTCAGAAACACTTGCCAATGCTCTGTGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125326.8 ENSMUST00000140516.8 |
||
| 3UTR-3UTR CCA 90 bp | CCATTCTTTATCTTGCCTGTTTCCTCCTTGCCGGGTTCCTGTGCTGATGTCTGGTGGGCAGGGCTGGAGTaGGTGAGTGCTATGTGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: PFFILPVSSLPGSCADVWWAGLE*VSAMCW Trigger: CCAGCACATAGCACTCACCCACTCCAGCCCTGCCCA...CCAGACATCAGCACAGGAACCCGGCAAGGAGGAAACAGGCAAGATAAAGAATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR-3UTR TCA 90 bp | CACAGAGCATTGGCAAGTGTTTCTGAGAGCGGAGTAAAAGGATTGGGCAGGGCTGCTGATGTCTGGAGTTaGGGCAGACGTTCAGGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: HRALASVSESGVKGLGRAADVWS*GRRSGW Trigger: CCAACCTGAACGTCTGCCTCAACTCCAGACATCAGC...AGCCCTGCCCAATCCTTTTACTCCGCTCTCAGAAACACTTGCCAATGCTCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR-3UTR TCA 90 bp | TTAAGATGCACATCGATGTCCCACTCACCTTCGGGTGAGGAGGCTGCTTTTGGGGTTCAGGTTGGGTTCTaGCAAGTTCACCAGCTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: LRCTSMSHSPSGEEAAFGVQVGF*QVHQLK Trigger: CTTCAGCTGGTGAACTTGTCAGAACCCAACCTGAAC...CCCAAAAGCAGCCTCCTCACCCGAAGGTGAGTGGGACATCGATGTGCATCTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR CAA 90 bp | ATTCCATTCCCATTGCTCATCCTTGTGTGGCCGCCATTCTTTATCTaGCCTGTTTCCTCCTTGCCGGGTTCCTGTGCTGATGTCTGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: IPFPLLILVWPPFFI*PVSSLPGSCADVWS Trigger: ACTCCAGACATCAGCACAGGAACCCGGCAAGGAGGAAACAGGCAAGATAAAGAATGGCGGCCACACAAGGATGAGCAATGGGAATGGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGCAAGCAGGTAATCTTATCTCTACTGCACAGAGTAACATGTTGCACCAAGGATGGGCAGGGCTGGAGTaGGTGAGTGCTATGTGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: MQAGNLISTAQSNMLHQGWAGLE*VSAMCW Trigger: CCAGCACATAGCACTCACCCACTCCAGCCCTGCCCA...TCCTTGGTGCAACATGTTACTCTGTGCAGTAGAGATAAGATTACCTGCTTGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125326.8 ENSMUST00000140516.8 |
||
| 3UTR-3UTR TCA 90 bp | GAAATAATAACTAGCTTTCTTGAGGTCACAGAGCATTGGCAAGTGTTTCTGAGACAGGGCTGGAGTGGGTaGGTGCTATGTGCTGGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: EIITSFLEVTEHWQVFLRQGWSG*VLCAGS Trigger: GCTGCCAGCACATAGCACTCACCCACTCCAGCCCTG...TCTCAGAAACACTTGCCAATGCTCTGTGACCTCAAGAAAGCTAGTTATTATTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125326.8 ENSMUST00000140516.8 |
||
| 3UTR-3UTR CCA 90 bp | CACAGAGCATTGGCAAGTGTTTCTGAGAGCGGAGTAAAAGGATTGGGCAGGGCTAGCCTAACTTCAAGTTaGTTAAGGGCAGATGAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: HRALASVSESGVKGLGRASLTSS*LRADEV Trigger: CACCTCATCTGCCCTTAACCAACTTGAAGTTAGGCT...AGCCCTGCCCAATCCTTTTACTCCGCTCTCAGAAACACTTGCCAATGCTCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125326.8 ENSMUST00000140516.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCCTCCAGGCCTTCTTCTGTAACCTGTTATTCACTTCTGTATGTTCCTATGGCGCAGAACAAGAGAGCTaGAAAGCCCAGAGGAGACCA | + |
|
Preference number: 2 (lower is better) Translates to: FLQAFFCNLLFTSVCSYGAEQES*KAQRRP Trigger: TGGTCTCCTCTGGGCTTTTCAGCTCTCTTGTTCTGC...GCCATAGGAACATACAGAAGTGAATAACAGGTTACAGAAGAAGGCCTGGAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR-3UTR TCA 90 bp | CTTCTGTTTCAAAGACGAGGAGGAAGGCAGCTGTACATTAGCATCGTATTTAAAACGGGAGGGTGTGTGTaGATCCAAACTCTCCCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: LLFQRRGGRQLYISIVFKTGGCV*IQTLPS Trigger: GGAGGGGAGAGTTTGGATTCACACACACCCTCCCGT...TTTAAATACGATGCTAATGTACAGCTGCCTTCCTCCTCGTCTTTGAAACAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR-3UTR GCA 90 bp | AACCTGGTTCATCCTTTACAGCTCCCATCCTGCTTGCTTCCATTACACTTCCTGATGGGAGTCTTACCATaGGCCTTTCTTTCCCCTACA | + |
|
Preference number: 2 (lower is better) Translates to: NLVHPLQLPSCLLPLHFLMGVLP*AFLSPT Trigger: TGTAGGGGAAAGAAAGGCGCATGGTAAGACTCCCAT...CAGGAAGTGTAATGGAAGCAAGCAGGATGGGAGCTGTAAAGGATGAACCAGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR-3UTR GCA 90 bp | CCACAGTGCCATATCTTCCTCCAGGCCTTCTTCTGTAACCTGTTATTCACTTCTAGCTCCCATCCTGCTTaGTTCCATTACACTTCCTGC | + |
|
Preference number: 2 (lower is better) Translates to: PQCHIFLQAFFCNLLFTSSSHPA*FHYTSC Trigger: GCAGGAAGTGTAATGGAAGCAAGCAGGATGGGAGCT...AGAAGTGAATAACAGGTTACAGAAGAAGGCCTGGAGGAAGATATGGCACTGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR-3UTR GCA 90 bp | ATGCAAGCAGGTAATCTTATCTCTACTGCACAGAGTAACATGTTGCACCAAGGATGGGTGAGTGCTATGTaGTGGCAGCAAGGGAACTGG | + |
|
Preference number: 2 (lower is better) Translates to: MQAGNLISTAQSNMLHQGWVSAM*WQQGNW Trigger: CCAGTTCCCTTGCTGCCAGCACATAGCACTCACCCA...TCCTTGGTGCAACATGTTACTCTGTGCAGTAGAGATAAGATTACCTGCTTGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125326.8 ENSMUST00000140516.8 |
||
| 3UTR-3UTR TCA 90 bp | AACAAGAGAGCTGAAAAGCCCAGAGGAGACCAACACGGAGAGTCCCACATCTGTAAACAGTGCAAATACTaGGTTGTTTCATGGGAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: NKRAEKPRGDQHGESHICKQCKY*VVSWES Trigger: AGACTCCCATGAAACAACTCAGTATTTGCACTGTTT...ACAGATGTGGGACTCTCCGTGTTGGTCTCCTCTGGGCTTTTCAGCTCTCTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR-3UTR CCA 90 bp | AACCTGGTTCATCCTTTACAGCTCCCATCCTGCTTGCTTCCATTACACTTCCTGTTCTTCAGAGCACTCTaGCAGAACAAGAGAGCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: NLVHPLQLPSCLLPLHFLFFRAL*QNKRAE Trigger: TTCAGCTCTCTTGTTCTGCCAGAGTGCTCTGAAGAA...CAGGAAGTGTAATGGAAGCAAGCAGGATGGGAGCTGTAAAGGATGAACCAGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR CAA 90 bp | CAAGGTAAAACTGAGCTTCAAGACAAGACACCCTCTTTCCACAGCTaGGCCTATATGTGGTTTGCCGTATTGACCTTCTCTGAGGTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: QGKTELQDKTPSFHS*AYMWFAVLTFSEVK Trigger: TTTGACCTCAGAGAAGGTCAATACGGCAAACCACATATAGGCCAAGCTGTGGAAAGAGGGTGTCTTGTCTTGAAGCTCAGTTTTACCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| 3UTR CAA 90 bp | GCTGACTGCAAACAAGAGGCAGTCTATCAGCCTCTTCCATCTGTGTaGTCTCATCAAGGTAGCACATACCTGCTATGTACCATAAACAGT | + |
|
Preference number: 2 (lower is better) Translates to: ADCKQEAVYQPLPSV*SHQGSTYLLCTINS Trigger: ACTGTTTATGGTACATAGCAGGTATGTGCTACCTTGATGAGACAACACAGATGGAAGAGGCTGATAGACTGCCTCTTGTTTGCAGTCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| 3UTR-3UTR TCA 90 bp | AACAAGAGAGCTGAAAAGCCCAGAGGAGACCAACACGGAGAGTCCCACATCTGTGGCTTAAATACATACTaGGCAATGTTGTGTTTAGAG | + |
|
Preference number: 2 (lower is better) Translates to: NKRAEKPRGDQHGESHICGLNTY*AMLCLE Trigger: CTCTAAACACAACATTGCTCAGTATGTATTTAAGCC...ACAGATGTGGGACTCTCCGTGTTGGTCTCCTCTGGGCTTTTCAGCTCTCTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR-3UTR GCA 90 bp | TTTGAAACCTGGTTCATCCTTTACAGCTCCCATCCTGCTTGCTTCCATTACACTATGGGAGTCTTACCATaGGCCTTTCTTTCCCCTACA | + |
|
Preference number: 2 (lower is better) Translates to: FETWFILYSSHPACFHYTMGVLP*AFLSPT Trigger: TGTAGGGGAAAGAAAGGCGCATGGTAAGACTCCCAT...AGTGTAATGGAAGCAAGCAGGATGGGAGCTGTAAAGGATGAACCAGGTTTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR-3UTR GCA 90 bp | CCACAGTGCCATATCTTCCTCCAGGCCTTCTTCTGTAACCTGTTATTCACTTCTTTACAGCTCCCATCCTaGTTGCTTCCATTACACTTC | + |
|
Preference number: 2 (lower is better) Translates to: PQCHIFLQAFFCNLLFTSLQLPS*LLPLHF Trigger: GAAGTGTAATGGAAGCAAGCAGGATGGGAGCTGTAA...AGAAGTGAATAACAGGTTACAGAAGAAGGCCTGGAGGAAGATATGGCACTGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR-3UTR GCA 90 bp | GATGTCATTGTTTACAGACAAGCTGGACTGGATTTTTCTGTGCATCTTCTGAGAGAGCTTCCAGCATGCTaGAGGCTTCTCCATCAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: DVIVYRQAGLDFSVHLLRELPAC*RLLHQR Trigger: TCTCTGATGGAGAAGCCTGCAGCATGCTGGAAGCTC...TCTCAGAAGATGCACAGAAAAATCCAGTCCAGCTTGTCTGTAAACAATGACATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGCAAGCAGGTAATCTTATCTCTACTGCACAGAGTAACATGTTGCACCAAGGACGCCATTCTTTATCTTaGCTGTTTCCTCCTTGCCGG | + |
|
Preference number: 2 (lower is better) Translates to: MQAGNLISTAQSNMLHQGRHSLS*LFPPCR Trigger: CCGGCAAGGAGGAAACAGGCAAGATAAAGAATGGCG...TCCTTGGTGCAACATGTTACTCTGTGCAGTAGAGATAAGATTACCTGCTTGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR-3UTR CCA 90 bp | CCACAGTGCCATATCTTCCTCCAGGCCTTCTTCTGTAACCTGTTATTCACTTCTGCATGCTTTGAAACCTaGTTCATCCTTTACAGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: PQCHIFLQAFFCNLLFTSACFET*FILYSS Trigger: GGAGCTGTAAAGGATGAACCAGGTTTCAAAGCATGC...AGAAGTGAATAACAGGTTACAGAAGAAGGCCTGGAGGAAGATATGGCACTGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR-3UTR TCA 90 bp | ATAAAGAACCGAGTCTTTCCAAATATAAGGCAGCTTTGGAAAAACCCCAAGGAAGCAGAACAAGAGAGCTaGAAAGCCCAGAGGAGACCA | + |
|
Preference number: 2 (lower is better) Translates to: IKNRVFPNIRQLWKNPKEAEQES*KAQRRP Trigger: TGGTCTCCTCTGGGCTTTTCAGCTCTCTTGTTCTGC...TTCCTTGGGGTTTTTCCAAAGCTGCCTTATATTTGGAAAGACTCGGTTCTTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR-3UTR TCA 90 bp | TTCCTCCAGGCCTTCTTCTGTAACCTGTTATTCACTTCTGTATGTTCCTATGGCGAAGCCAGCATGCTTTaGAACCTGGTTCATCCTTTA | + |
|
Preference number: 2 (lower is better) Translates to: FLQAFFCNLLFTSVCSYGEASML*NLVHPL Trigger: TAAAGGATGAACCAGGTTTCAAAGCATGCTGGCTTC...GCCATAGGAACATACAGAAGTGAATAACAGGTTACAGAAGAAGGCCTGGAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR-3UTR TCA 90 bp | TTACAGACAAGCTGGACTGGATTTTTCTGTGCATCTTCTGAGAAACGGGGGCTGAGCATTTCCAATTACTaGGCTCATTGGCAGAAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: LQTSWTGFFCASSEKRGLSISNY*AHWQKE Trigger: TTCTTTCTGCCAATGAGCTCAGTAATTGGAAATGCT...CAGCCCCCGTTTCTCAGAAGATGCACAGAAAAATCCAGTCCAGCTTGTCTGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGGTATGTGGAAATACTAAGGTTGCCATTATATTTGACGCAGCGAATCAAAGCAGCTCCCATCCTGCTTaGTTCCATTACACTTCCTGC | + |
|
Preference number: 2 (lower is better) Translates to: WVCGNTKVAIIFDAANQSSSHPA*FHYTSC Trigger: GCAGGAAGTGTAATGGAAGCAAGCAGGATGGGAGCT...GCTTTGATTCGCTGCGTCAAATATAATGGCAACCTTAGTATTTCCACATACCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR-3UTR CCA 90 bp | TGGGTATGTGGAAATACTAAGGTTGCCATTATATTTGACGCAGCGAATCAAAGCTGGAATCCTGATACCTaGTGGATGGTGTTGGACGTC | + |
|
Preference number: 2 (lower is better) Translates to: WVCGNTKVAIIFDAANQSWNPDT*WMVLDV Trigger: GACGTCCAACACCATCCACCAGGTATCAGGATTCCA...GCTTTGATTCGCTGCGTCAAATATAATGGCAACCTTAGTATTTCCACATACCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR CAA 90 bp | GAGAAGAAAACCATGGGAGAGAGCTACGTGTTTCATTCATACACATaGCCTTTTCTCCTCTGTGTTTCTTCCAAAGCTGCATCCTTGCAT | + |
|
Preference number: 2 (lower is better) Translates to: EKKTMGESYVFHSYT*PFLLCVSSKAASLH Trigger: ATGCAAGGATGCAGCTTTGGAAGAAACACAGAGGAGAAAAGGCAATGTGTATGAATGAAACACGTAGCTCTCTCCCATGGTTTTCTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| 3UTR-3UTR TCA 90 bp | CCACAGTGCCATATCTTCCTCCAGGCCTTCTTCTGTAACCTGTTATTCACTTCTAAACAGTGCAAATACTaGGTTGTTTCATGGGAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: PQCHIFLQAFFCNLLFTSKQCKY*VVSWES Trigger: AGACTCCCATGAAACAACTCAGTATTTGCACTGTTT...AGAAGTGAATAACAGGTTACAGAAGAAGGCCTGGAGGAAGATATGGCACTGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR-3UTR TCA 90 bp | AATGTGATCTTCTTCAGAGCACTCTGGCAGAACAAGAGAGCTGAAAAGCCCAGAAAACAGTGCAAATACTaGGTTGTTTCATGGGAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: NVIFFRALWQNKRAEKPRKQCKY*VVSWES Trigger: AGACTCCCATGAAACAACTCAGTATTTGCACTGTTT...TCTGGGCTTTTCAGCTCTCTTGTTCTGCCAGAGTGCTCTGAAGAAGATCACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR-3UTR GCA 90 bp | CCACAGTGCCATATCTTCCTCCAGGCCTTCTTCTGTAACCTGTTATTCACTTCTTTTAGAGCAAAGAGCTaGTCAGAATGGTTAGCGAAA | + |
|
Preference number: 2 (lower is better) Translates to: PQCHIFLQAFFCNLLFTSFRAKS*SEWLAK Trigger: TTTCGCTAACCATTCTGAGCAGCTCTTTGCTCTAAA...AGAAGTGAATAACAGGTTACAGAAGAAGGCCTGGAGGAAGATATGGCACTGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR-3UTR CCA 90 bp | ATGCAAGCAGGTAATCTTATCTCTACTGCACAGAGTAACATGTTGCACCAAGGAGTAGGGTCACTGACCTaGAACTATGCAGACCATTTA | + |
|
Preference number: 2 (lower is better) Translates to: MQAGNLISTAQSNMLHQGVGSLT*NYADHL Trigger: TAAATGGTCTGCATAGTTCCAGGTCAGTGACCCTAC...TCCTTGGTGCAACATGTTACTCTGTGCAGTAGAGATAAGATTACCTGCTTGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGGTATGTGGAAATACTAAGGTTGCCATTATATTTGACGCAGCGAATCAAAGCTGGATGAGAGCAATGTaGTCTTCTTCAGAGCACTCT | + |
|
Preference number: 2 (lower is better) Translates to: WVCGNTKVAIIFDAANQSWMRAM*SSSEHS Trigger: AGAGTGCTCTGAAGAAGATCACATTGCTCTCATCCA...GCTTTGATTCGCTGCGTCAAATATAATGGCAACCTTAGTATTTCCACATACCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR-3UTR TCA 90 bp | CTTCTGTTTCAAAGACGAGGAGGAAGGCAGCTGTACATTAGCATCGTATTTAAAGAAGCCAGCATGCTTTaGAACCTGGTTCATCCTTTA | + |
|
Preference number: 2 (lower is better) Translates to: LLFQRRGGRQLYISIVFKEASML*NLVHPL Trigger: TAAAGGATGAACCAGGTTTCAAAGCATGCTGGCTTC...TTTAAATACGATGCTAATGTACAGCTGCCTTCCTCCTCGTCTTTGAAACAGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR-3UTR TCA 90 bp | ATAGTATTTAGCCTAACTTCAAGTTGGTTAAGGGCAGATGAGGTGCCATTGAAGCAGCAAGCTCTGAAATaGATTCCTTCAAGAGGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: IVFSLTSSWLRADEVPLKQQALK*IPSRGR Trigger: CCTTCCTCTTGAAGGAATTCATTTCAGAGCTTGCTG...CTTCAATGGCACCTCATCTGCCCTTAACCAACTTGAAGTTAGGCTAAATACTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGCTTAAATACATACTGAGCAATGTTGTGTTTAGAGCAAAGAGCTGCTCAGAAATGGGAGTCTTACCATaGGCCTTTCTTTCCCCTACA | + |
|
Preference number: 2 (lower is better) Translates to: WLKYILSNVVFRAKSCSEMGVLP*AFLSPT Trigger: TGTAGGGGAAAGAAAGGCGCATGGTAAGACTCCCAT...TTCTGAGCAGCTCTTTGCTCTAAACACAACATTGCTCAGTATGTATTTAAGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR-3UTR GCA 90 bp | GTCTTTCCAAATATAAGGCAGCTTTGGAAAAACCCCAAGGAATACTGGGATTTTATGGGAGTCTTACCATaGGCCTTTCTTTCCCCTACA | + |
|
Preference number: 2 (lower is better) Translates to: VFPNIRQLWKNPKEYWDFMGVLP*AFLSPT Trigger: TGTAGGGGAAAGAAAGGCGCATGGTAAGACTCCCAT...AAAATCCCAGTATTCCTTGGGGTTTTTCCAAAGCTGCCTTATATTTGGAAAGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR-3UTR GCA 90 bp | GTCTTTCCAAATATAAGGCAGCTTTGGAAAAACCCCAAGGAATACTGGGATTTTGTTCCTATGGCCTCTTaGCTTTACAGTCTTGAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: VFPNIRQLWKNPKEYWDFVPMAS*LYSLEA Trigger: GGCTTCAAGACTGTAAAGGCAAGAGGCCATAGGAAC...AAAATCCCAGTATTCCTTGGGGTTTTTCCAAAGCTGCCTTATATTTGGAAAGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR-3UTR GCA 90 bp | TTCAGAGGCGACACCACAGTCAACAGGTTCAAGGTAAAACTGAGCTTCAAGACATGTTTCTTCCAAAGCTaGATCCTTGCATTTCAAATG | + |
|
Preference number: 2 (lower is better) Translates to: FRGDTTVNRFKVKLSFKTCFFQS*ILAFQM Trigger: CATTTGAAATGCAAGGATGCAGCTTTGGAAGAAACA...TGTCTTGAAGCTCAGTTTTACCTTGAACCTGTTGACTGTGGTGTCGCCTCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTCTGTTTCAAAGACGAGGAGGAAGGCAGCTGTACATTAGCATCGTATTTAAAGCATGCTTTGAAACCTaGTTCATCCTTTACAGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: LLFQRRGGRQLYISIVFKACFET*FILYSS Trigger: GGAGCTGTAAAGGATGAACCAGGTTTCAAAGCATGC...TTTAAATACGATGCTAATGTACAGCTGCCTTCCTCCTCGTCTTTGAAACAGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR-3UTR TCA 90 bp | ATAAAGAACCGAGTCTTTCCAAATATAAGGCAGCTTTGGAAAAACCCCAAGGAATGGATGAGAGCAATGTaGTCTTCTTCAGAGCACTCT | + |
|
Preference number: 2 (lower is better) Translates to: IKNRVFPNIRQLWKNPKEWMRAM*SSSEHS Trigger: AGAGTGCTCTGAAGAAGATCACATTGCTCTCATCCA...TTCCTTGGGGTTTTTCCAAAGCTGCCTTATATTTGGAAAGACTCGGTTCTTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR-3UTR TCA 90 bp | GTCTTTCCAAATATAAGGCAGCTTTGGAAAAACCCCAAGGAATACTGGGATTTTGAAGCCAGCATGCTTTaGAACCTGGTTCATCCTTTA | + |
|
Preference number: 2 (lower is better) Translates to: VFPNIRQLWKNPKEYWDFEASML*NLVHPL Trigger: TAAAGGATGAACCAGGTTTCAAAGCATGCTGGCTTC...AAAATCCCAGTATTCCTTGGGGTTTTTCCAAAGCTGCCTTATATTTGGAAAGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR-3UTR TCA 90 bp | CTTCTGTTTCAAAGACGAGGAGGAAGGCAGCTGTACATTAGCATCGTATTTAAAAAACTCACCTCCTTATaGAAGACAACATGGCTAGGA | + |
|
Preference number: 2 (lower is better) Translates to: LLFQRRGGRQLYISIVFKKLTSL*KTTWLG Trigger: TCCTAGCCATGTTGTCTTTCATAAGGAGGTGAGTTT...TTTAAATACGATGCTAATGTACAGCTGCCTTCCTCCTCGTCTTTGAAACAGAAG 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR-3UTR TCA 90 bp | GCTCTGCTTACCCACTTTGACACTATCCTCTCTTTTGGTTGCAACTTTTACCTTTCTCTGCAACATGTTTaGTACTTTCCTTGGTGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: ALLTHFDTILSFGCNFYLSLQHV*YFPWCF Trigger: GAAACACCAAGGAAAGTATCAAACATGTTGCAGAGA...AAGGTAAAAGTTGCAACCAAAAGAGAGGATAGTGTCAAAGTGGGTAAGCAGAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCAGAGGCGACACCACAGTCAACAGGTTCAAGGTAAAACTGAGCTTCAAGACAACTGACCTGGAACTATaGAGACCATTTATTATCATA | + |
|
Preference number: 2 (lower is better) Translates to: FRGDTTVNRFKVKLSFKTTDLEL*RPFIII Trigger: TATGATAATAAATGGTCTGCATAGTTCCAGGTCAGT...TGTCTTGAAGCTCAGTTTTACCTTGAACCTGTTGACTGTGGTGTCGCCTCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTCTGCTTACCCACTTTGACACTATCCTCTCTTTTGGTTGCAACTTTTACCTTCAAAGAAAATTGCATTaGCTTCTCAACTCCTTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: ALLTHFDTILSFGCNFYLQRKLH*LLNSLE Trigger: CTCCAAGGAGTTGAGAAGGCAATGCAATTTTCTTTG...AAGGTAAAAGTTGCAACCAAAAGAGAGGATAGTGTCAAAGTGGGTAAGCAGAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCAGAGGCGACACCACAGTCAACAGGTTCAAGGTAAAACTGAGCTTCAAGACAGTTTCATTCTCCTCATaGTCCCAATTTGATCTTAAA | + |
|
Preference number: 2 (lower is better) Translates to: FRGDTTVNRFKVKLSFKTVSFSS*SQFDLK Trigger: TTTAAGATCAAATTGGGAGCATGAGGAGAATGAAAC...TGTCTTGAAGCTCAGTTTTACCTTGAACCTGTTGACTGTGGTGTCGCCTCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| 3UTR-3UTR CCA 90 bp | ATAGTATTTAGCCTAACTTCAAGTTGGTTAAGGGCAGATGAGGTGCCATTGAAGGTAGTCACTCTAAGGTaGCAATCTAAAAGCAGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: IVFSLTSSWLRADEVPLKVVTLR*QSKSSA Trigger: AGCACTGCTTTTAGATTGCCACCTTAGAGTGACTAC...CTTCAATGGCACCTCATCTGCCCTTAACCAACTTGAAGTTAGGCTAAATACTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125326.8 ENSMUST00000140516.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGGTATGTGGAAATACTAAGGTTGCCATTATATTTGACGCAGCGAATCAAAGCAAACAGTGCAAATACTaGGTTGTTTCATGGGAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: WVCGNTKVAIIFDAANQSKQCKY*VVSWES Trigger: AGACTCCCATGAAACAACTCAGTATTTGCACTGTTT...GCTTTGATTCGCTGCGTCAAATATAATGGCAACCTTAGTATTTCCACATACCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR-3UTR TCA 90 bp | AATACGACACAACGAACCATCCAAAGAGCATCTGCAGGTTTCATCATATTGAGTCTTTTCAGCAAGCTCTaGAATGAATTCCTTCAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: NTTQRTIQRASAGFIILSLFSKL*NEFLQE Trigger: CTCTTGAAGGAATTCATTTCAGAGCTTGCTGAAAAG...ACTCAATATGATGAAACCTGCAGATGCTCTTTGGATGGTTCGTTGTGTCGTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTGGAATCTTGCTGGATACACACCATTCGTCATCCTCAAATTCCACTGCTGAAACTTGTCTCCTACAATaGCATTTCATTATCCATTCA | + |
|
Preference number: 2 (lower is better) Translates to: SGILLDTHHSSSSNSTAETCLLQ*HFIIHS Trigger: TGAATGGATAATGAAATGGCATTGTAGGAGACAAGT...TTCAGCAGTGGAATTTGAGGATGACGAATGGTGTGTATCCAGCAAGATTCCAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR-3UTR CCA 90 bp | AATACGACACAACGAACCATCCAAAGAGCATCTGCAGGTTTCATCATATTGAGTTTTCTGGAATCTTGCTaGATACACACCATTCGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: NTTQRTIQRASAGFIILSFLESC*IHTIRH Trigger: ATGACGAATGGTGTGTATCCAGCAAGATTCCAGAAA...ACTCAATATGATGAAACCTGCAGATGCTCTTTGGATGGTTCGTTGTGTCGTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGGTATGTGGAAATACTAAGGTTGCCATTATATTTGACGCAGCGAATCAAAGCTTACATGTAGGAAAGTaGGTATTTGCATTAGTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: WVCGNTKVAIIFDAANQSLHVGK*VFALVE Trigger: CTCAACTAATGCAAATACGCACTTTCCTACATGTAA...GCTTTGATTCGCTGCGTCAAATATAATGGCAACCTTAGTATTTCCACATACCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR-3UTR GCA 90 bp | CTTCTGTTTCAAAGACGAGGAGGAAGGCAGCTGTACATTAGCATCGTATTTAAATTACATGTAGGAAAGTaGGTATTTGCATTAGTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: LLFQRRGGRQLYISIVFKLHVGK*VFALVE Trigger: CTCAACTAATGCAAATACGCACTTTCCTACATGTAA...TTTAAATACGATGCTAATGTACAGCTGCCTTCCTCCTCGTCTTTGAAACAGAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR CAA 90 bp | TTACCCACTTTGACACTATCCTCTCTTTTGGTTGCAACTTTTACCTaGAGTATAAATTATATTGATAACTTGGGAGACATCTTGCTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: LPTLTLSSLLVATFT*SINYIDNLGDILLA Trigger: AGCCAGCAAGATGTCTCCCAAGTTATCAATATAATTTATACTCAAGGTAAAAGTTGCAACCAAAAGAGAGGATAGTGTCAAAGTGGGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| 3UTR GCA 72 bp | GGAGTAAAAGGATTGGGCAGGGCTGGAGTGGGTGAGTaGTATGTGCTGGCAGCAAGGGAACTGGAAGATGGC | + |
|
Preference number: 3 (lower is better) Translates to: GVKGLGRAGVGE*YVLAARELEDG Trigger: GCCATCTTCCAGTTCCCTTGCTGCCAGCACATAGCACTCACCCACTCCAGCCCTGCCCAATCCTTTTACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125326.8 ENSMUST00000140516.8 |
||
| 3UTR CCA 72 bp | GATTGGGCAGGGCTGGAGTGGGTGAGTGCTATGTGCTaGCAGCAAGGGAACTGGAAGATGGCTCACAAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: DWAGLEWVSAMC*QQGNWKMAHKV Trigger: TACTTTGTGAGCCATCTTCCAGTTCCCTTGCTGCCAGCACATAGCACTCACCCACTCCAGCCCTGCCCAATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125326.8 ENSMUST00000140516.8 |
||
| 3UTR-3UTR CAA 90 bp | TTAAGATGCACATCGATGTCCCACTCACCTTCGGGTGAGGAGGCTGCTTTTGGGCTTCTCTTCACTCTCTaGCTGGCCCAGTCAGGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LRCTSMSHSPSGEEAAFGLLFTL*LAQSGQ Trigger: CTGACCTGACTGGGCCAGCAAGAGAGTGAAGAGAAG...CCCAAAAGCAGCCTCCTCACCCGAAGGTGAGTGGGACATCGATGTGCATCTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR TCA 72 bp | TCCTCCTTGCCGGGTTCCTGTGCTGATGTCTGGAGTTaGGGCAGACGTTCAGGTTGGGTTCTGACAAGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: SSLPGSCADVWS*GRRSGWVLTSS Trigger: TGAACTTGTCAGAACCCAACCTGAACGTCTGCCTCAACTCCAGACATCAGCACAGGAACCCGGCAAGGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR CCA 72 bp | CAAATGGACTGGTCCCGCATCAGCCCACACCTGGTATaGCCACTGGTAGCTGGCCTTTTATCTTTCTCCGTA | + |
|
Preference number: 3 (lower is better) Translates to: QMDWSRISPHLV*PLVAGLLSFSV Trigger: TACGGAGAAAGATAAAAGGCCAGCTACCAGTGGCCATACCAGGTGTGGGCTGATGCGGGACCAGTCCATTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR TCA 72 bp | GATCTTCTTCAGAGCACTCTGGCAGAACAAGAGAGCTaGAAAGCCCAGAGGAGACCAACACGGAGAGTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: DLLQSTLAEQES*KAQRRPTRRVP Trigger: TGGGACTCTCCGTGTTGGTCTCCTCTGGGCTTTTCAGCTCTCTTGTTCTGCCAGAGTGCTCTGAAGAAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR GCA 72 bp | CATTGCTCATCCTTGTGTGGCCGCCATTCTTTATCTTaGCTGTTTCCTCCTTGCCGGGTTCCTGTGCTGATG | + |
|
Preference number: 3 (lower is better) Translates to: HCSSLCGRHSLS*LFPPCRVPVLM Trigger: CATCAGCACAGGAACCCGGCAAGGAGGAAACAGGCAAGATAAAGAATGGCGGCCACACAAGGATGAGCAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR-3UTR CAA 90 bp | TTAAGATGCACATCGATGTCCCACTCACCTTCGGGTGAGGAGGCTGCTTTTGGGGCACAGAGTAACATGTaGCACCAAGGAGGGAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LRCTSMSHSPSGEEAAFGAQSNM*HQGGKE Trigger: TTCTTTCCCTCCTTGGTGCAACATGTTACTCTGTGC...CCCAAAAGCAGCCTCCTCACCCGAAGGTGAGTGGGACATCGATGTGCATCTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR-3UTR CAA 90 bp | TTACAGACAAGCTGGACTGGATTTTTCTGTGCATCTTCTGAGAAACGGGGGCTGCACCAGCTGAAGGATTaGGCCAAATGGACTGGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LQTSWTGFFCASSEKRGLHQLKD*AKWTGP Trigger: GGGACCAGTCCATTTGGCCAAATCCTTCAGCTGGTG...CAGCCCCCGTTTCTCAGAAGATGCACAGAAAAATCCAGTCCAGCTTGTCTGTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR TCA 72 bp | CCTGCTTGCTTCCATTACACTTCCTGCCGCTCTGGATaGGAGCAATGTGATCTTCTTCAGAGCACTCTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: PACFHYTSCRSG*EQCDLLQSTLA Trigger: TGCCAGAGTGCTCTGAAGAAGATCACATTGCTCTCATCCAGAGCGGCAGGAAGTGTAATGGAAGCAAGCAGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR TCA 72 bp | GCTTTCTTGAGGTCACAGAGCATTGGCAAGTGTTTCTaGGAGCGGAGTAAAAGGATTGGGCAGGGCTGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: AFLRSQSIGKCF*ERSKRIGQGWS Trigger: ACTCCAGCCCTGCCCAATCCTTTTACTCCGCTCTCAGAAACACTTGCCAATGCTCTGTGACCTCAAGAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125326.8 ENSMUST00000140516.8 |
||
| 3UTR TCA 72 bp | GGCCTGGACTTCAATATGGCTGAGTGTGTGGAGTTCTaGGGCAGAGCTGACTGCAAACAAGAGGCAGTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: GLDFNMAECVEF*GRADCKQEAVY Trigger: ATAGACTGCCTCTTGTTTGCAGTCAGCTCTGCCTCAGAACTCCACACACTCAGCCATATTGAAGTCCAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| 3UTR CCA 72 bp | GAGTGGGTGAGTGCTATGTGCTGGCAGCAAGGGAACTaGAAGATGGCTCACAAAGTAGATACCCATCACCTA | + |
|
Preference number: 3 (lower is better) Translates to: EWVSAMCWQQGN*KMAHKVDTHHL Trigger: TAGGTGATGGGTATCTACTTTGTGAGCCATCTTCCAGTTCCCTTGCTGCCAGCACATAGCACTCACCCACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125326.8 ENSMUST00000140516.8 |
||
| 3UTR TCA 72 bp | CCATTACACTTCCTGCCGCTCTGGATGAGAGCAATGTaGTCTTCTTCAGAGCACTCTGGCAGAACAAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: PLHFLPLWMRAM*SSSEHSGRTRE Trigger: CTCTCTTGTTCTGCCAGAGTGCTCTGAAGAAGATCACATTGCTCTCATCCAGAGCGGCAGGAAGTGTAATGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR TCA 72 bp | GCCTCTTGCCTTTACAGTCTTGAAGCCAGCATGCTTTaGAACCTGGTTCATCCTTTACAGCTCCCATCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: ASCLYSLEASML*NLVHPLQLPSC Trigger: GCAGGATGGGAGCTGTAAAGGATGAACCAGGTTTCAAAGCATGCTGGCTTCAAGACTGTAAAGGCAAGAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR TCA 72 bp | ATGTCTGGAGTTGAGGCAGACGTTCAGGTTGGGTTCTaGCAAGTTCACCAGCTGAAGGATTTGGCCAAATGG | + |
|
Preference number: 3 (lower is better) Translates to: MSGVEADVQVGF*QVHQLKDLAKW Trigger: CCATTTGGCCAAATCCTTCAGCTGGTGAACTTGTCAGAACCCAACCTGAACGTCTGCCTCAACTCCAGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR CCA 72 bp | GAAAGTAAGGCCTGGACTTCAATATGGCTGAGTGTGTaGAGTTCTGAGGCAGAGCTGACTGCAAACAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: ESKAWTSIWLSV*SSEAELTANKR Trigger: CCTCTTGTTTGCAGTCAGCTCTGCCTCAGAACTCCACACACTCAGCCATATTGAAGTCCAGGCCTTACTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| 3UTR CCA 72 bp | GGCATTGTGTACGAAAGTAAGGCCTGGACTTCAATATaGCTGAGTGTGTGGAGTTCTGAGGCAGAGCTGACT | + |
|
Preference number: 3 (lower is better) Translates to: GIVYESKAWTSI*LSVWSSEAELT Trigger: AGTCAGCTCTGCCTCAGAACTCCACACACTCAGCCATATTGAAGTCCAGGCCTTACTTTCGTACACAATGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| 3UTR TCA 72 bp | GTGTGTGTGAATCCAAACTCTCCCCTCCACATGAGCTaGCTCCATCACTGTAGAATTAGTCTCATTGCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: VCVNPNSPLHMS*LHHCRISLIAA Trigger: GGCTGCAATGAGACTAATTCTACAGTGATGGAGTCAGCTCATGTGGAGGGGAGAGTTTGGATTCACACACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR GCA 72 bp | CTCTTGCTGGCCCAGTCAGGTCAGTTTCTGGAATCTTaGTGGATACACACCATTCGTCATCCTCAAATTCCA | + |
|
Preference number: 3 (lower is better) Translates to: LLLAQSGQFLES*WIHTIRHPQIP Trigger: TGGAATTTGAGGATGACGAATGGTGTGTATCCAGCAAGATTCCAGAAACTGACCTGACTGGGCCAGCAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR GCA 72 bp | ACACATGTTTGGCTCCGTGAGGAATTCCATTCCCATTaGTCATCCTTGTGTGGCCGCCATTCTTTATCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: THVWLREEFHSH*SSLCGRHSLSC Trigger: GCAAGATAAAGAATGGCGGCCACACAAGGATGAGCAATGGGAATGGAATTCCTCACGGAGCCAAACATGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR CCA 72 bp | GCCTTTACAGTCTTGAAGCCAGCATGCTTTGAAACCTaGTTCATCCTTTACAGCTCCCATCCTGCTTGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: AFTVLKPACFET*FILYSSHPACF Trigger: GAAGCAAGCAGGATGGGAGCTGTAAAGGATGAACCAGGTTTCAAAGCATGCTGGCTTCAAGACTGTAAAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR CCA 72 bp | GTGTCCATGAGTTTTGTCTTCTCTTCACTCTCTTGCTaGCCCAGTCAGGTCAGTTTCTGGAATCTTGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: VSMSFVFSSLSC*PSQVSFWNLAG Trigger: TCCAGCAAGATTCCAGAAACTGACCTGACTGGGCCAGCAAGAGAGTGAAGAGAAGACAAAACTCATGGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR-3UTR CAA 90 bp | ATAGTATTTAGCCTAACTTCAAGTTGGTTAAGGGCAGATGAGGTGCCATTGAAGAGCGGAGTAAAAGGATaGGGCAGGGCTGGAGTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: IVFSLTSSWLRADEVPLKSGVKG*GRAGVG Trigger: ACCCACTCCAGCCCTGCCCAATCCTTTTACTCCGCT...CTTCAATGGCACCTCATCTGCCCTTAACCAACTTGAAGTTAGGCTAAATACTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125326.8 ENSMUST00000140516.8 |
||
| 3UTR-3UTR CAA 90 bp | CACAGAGCATTGGCAAGTGTTTCTGAGAGCGGAGTAAAAGGATTGGGCAGGGCTTTATCTTTCTCCGTATaGTCCTCATTACATGCTTCG | + |
|
Preference number: 3 (lower is better) Translates to: HRALASVSESGVKGLGRALSFSV*SSLHAS Trigger: CGAAGCATGTAATGAGGACAATACGGAGAAAGATAA...AGCCCTGCCCAATCCTTTTACTCCGCTCTCAGAAACACTTGCCAATGCTCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR TCA 72 bp | CTGGATTTTTCTGTGCATCTTCTGAGAAACGGGGGCTaGTATCTTGTGATTCTCCACGGACACATGTTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LDFSVHLLRNGG*YLVILHGHMFG Trigger: GCCAAACATGTGTCCGTGGAGAATCACAAGATATCAGCCCCCGTTTCTCAGAAGATGCACAGAAAAATCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR GCA 72 bp | CTATGGCCTCTTGCCTTTACAGTCTTGAAGCCAGCATaGTTTGAAACCTGGTTCATCCTTTACAGCTCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: LWPLAFTVLKPA*FETWFILYSSH Trigger: ATGGGAGCTGTAAAGGATGAACCAGGTTTCAAAGCATGCTGGCTTCAAGACTGTAAAGGCAAGAGGCCATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR-3UTR CAA 90 bp | CCACAGTGCCATATCTTCCTCCAGGCCTTCTTCTGTAACCTGTTATTCACTTCTCTTGCCTTTACAGTCTaGAAGCCAGCATGCTTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: PQCHIFLQAFFCNLLFTSLAFTV*KPACFE Trigger: TTCAAAGCATGCTGGCTTCAAGACTGTAAAGGCAAG...AGAAGTGAATAACAGGTTACAGAAGAAGGCCTGGAGGAAGATATGGCACTGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR-3UTR CAA 90 bp | GATGTCATTGTTTACAGACAAGCTGGACTGGATTTTTCTGTGCATCTTCTGAGACCGCCATTCTTTATCTaGCCTGTTTCCTCCTTGCCG | + |
|
Preference number: 3 (lower is better) Translates to: DVIVYRQAGLDFSVHLLRPPFFI*PVSSLP Trigger: CGGCAAGGAGGAAACAGGCAAGATAAAGAATGGCGG...TCTCAGAAGATGCACAGAAAAATCCAGTCCAGCTTGTCTGTAAACAATGACATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR TCA 72 bp | AGTCCTCCTGTAGTGGATCCAAAACTCACCTCCTTATaGAAGACAACATGGCTAGGACTACAAGCCAATGAA | + |
|
Preference number: 3 (lower is better) Translates to: SPPVVDPKLTSL*KTTWLGLQANE Trigger: TTCATTGGCTTGTAGTCCTAGCCATGTTGTCTTTCATAAGGAGGTGAGTTTTGGATCCACTACAGGAGGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR TCA 72 bp | AAGCGAAAAGACATGGACGGGTCTCTGCAACATGTTTaGTACTTTCCTTGGTGTTTCATTCTCCTCATGCTC | + |
|
Preference number: 3 (lower is better) Translates to: KRKDMDGSLQHV*YFPWCFILLML Trigger: GAGCATGAGGAGAATGAAACACCAAGGAAAGTATCAAACATGTTGCAGAGACCCGTCCATGTCTTTTCGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| 3UTR GCA 72 bp | CCATGGGAGAGAGCTACGTGTTTCATTCATACACATTaGCTTTTCTCCTCTGTGTTTCTTCCAAAGCTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: PWERATCFIHTH*LFSSVFLPKLH Trigger: ATGCAGCTTTGGAAGAAACACAGAGGAGAAAAGGCAATGTGTATGAATGAAACACGTAGCTCTCTCCCATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| 3UTR GCA 72 bp | CCAATTACTGAGCTCATTGGCAGAAAGAATGGAGTCTaGACCATTAGGGGAAAGTCAAGAAGCTCCATGATA | + |
|
Preference number: 3 (lower is better) Translates to: PITELIGRKNGV*TIRGKSRSSMI Trigger: TATCATGGAGCTTCTTGACTTTCCCCTAATGGTGCAGACTCCATTCTTTCTGCCAATGAGCTCAGTAATTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR GCA 72 bp | TGGCCTTTTATCTTTCTCCGTATTGTCCTCATTACATaGTTCGGTATCTGTAAACCCTCCATGACTCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: WPFIFLRIVLIT*FGICKPSMTQL Trigger: CAGCTGAGTCATGGAGGGTTTACAGATACCGAAGCATGTAATGAGGACAATACGGAGAAAGATAAAAGGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTGGAATCTTGCTGGATACACACCATTCGTCATCCTCAAATTCCACTGCTGAACAATTACTGAGCTCATaGGCAGAAAGAATGGAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: SGILLDTHHSSSSNSTAEQLLSS*AERMES Trigger: AGACTCCATTCTTTCTGCCAATGAGCTCAGTAATTG...TTCAGCAGTGGAATTTGAGGATGACGAATGGTGTGTATCCAGCAAGATTCCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR TCA 72 bp | GATGCCTTAAGGAATGGCTTGCCTGGAGTAGAGAGCTaGAGAATAGTCCTACCTGTACAAGTATGGAAATTA | + |
|
Preference number: 3 (lower is better) Translates to: DALRNGLPGVES*RIVLPVQVWKL Trigger: TAATTTCCATACTTGTACAGGTAGGACTATTCTTCAGCTCTCTACTCCAGGCAAGCCATTCCTTAAGGCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR TCA 72 bp | AATCCCTGCGTTATGATGAGACTTTTCAGCAAGCTCTaGAATGAATTCCTTCAAGAGGAAGGTCCTATAGCC | + |
|
Preference number: 3 (lower is better) Translates to: NPCVMMRLFSKL*NEFLQEEGPIA Trigger: GGCTATAGGACCTTCCTCTTGAAGGAATTCATTTCAGAGCTTGCTGAAAAGTCTCATCATAACGCAGGGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR GCA 72 bp | CAGGTAATCTTATCTCTACTGCACAGAGTAACATGTTaGACCAAGGAGGGAAAGAATAGAGGCACTGTGATA | + |
|
Preference number: 3 (lower is better) Translates to: QVILSLLHRVTC*TKEGKNRGTVI Trigger: TATCACAGTGCCTCTATTCTTTCCCTCCTTGGTGCAACATGTTACTCTGTGCAGTAGAGATAAGATTACCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125326.8 ENSMUST00000140516.8 |
||
| 3UTR CCA 72 bp | TGCCCTGGGTTCATAGTATTTAGCCTAACTTCAAGTTaGTTAAGGGCAGATGAGGTGCCATTGAAGATGAAA | + |
|
Preference number: 3 (lower is better) Translates to: CPGFIVFSLTSS*LRADEVPLKMK Trigger: TTTCATCTTCAATGGCACCTCATCTGCCCTTAACCAACTTGAAGTTAGGCTAAATACTATGAACCCAGGGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125326.8 ENSMUST00000140516.8 |
||
| 3UTR-3UTR CAA 90 bp | GATGTCATTGTTTACAGACAAGCTGGACTGGATTTTTCTGTGCATCTTCTGAGATCAGTTTCTGGAATCTaGCTGGATACACACCATTCG | + |
|
Preference number: 3 (lower is better) Translates to: DVIVYRQAGLDFSVHLLRSVSGI*LDTHHS Trigger: CGAATGGTGTGTATCCAGCAAGATTCCAGAAACTGA...TCTCAGAAGATGCACAGAAAAATCCAGTCCAGCTTGTCTGTAAACAATGACATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR TCA 72 bp | CATGTTGCACCAAGGAGGGAAAGAATAGAGGCACTGTaGTACGCCCCCAAATGGAATATTTATATTTTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: HVAPRRERIEAL*YAPKWNIYIFS Trigger: GCTAAAAATATAAATATTCCATTTGGGGGCGTATCACAGTGCCTCTATTCTTTCCCTCCTTGGTGCAACATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000125326.8 ENSMUST00000140516.8 |
||
| 3UTR TCA 72 bp | CTGCGTTATGATGAGACTTTTCAGCAAGCTCTGAAATaGATTCCTTCAAGAGGAAGGTCCTATAGCCAAACA | + |
|
Preference number: 3 (lower is better) Translates to: LRYDETFQQALK*IPSRGRSYSQT Trigger: TGTTTGGCTATAGGACCTTCCTCTTGAAGGAATTCATTTCAGAGCTTGCTGAAAAGTCTCATCATAACGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR CCA 72 bp | TTGAATTATACAAGATGCCTTAAGGAATGGCTTGCCTaGAGTAGAGAGCTGAAGAATAGTCCTACCTGTACA | + |
|
Preference number: 3 (lower is better) Translates to: LNYTRCLKEWLA*SRELKNSPTCT Trigger: TGTACAGGTAGGACTATTCTTCAGCTCTCTACTCCAGGCAAGCCATTCCTTAAGGCATCTTGTATAATTCAA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR-3UTR CAA 90 bp | CAATTGCATTCAATTATTTCACCCAATCACCTCGAAGTAAAGATCCTCCAAAGAGCACAGAGTAACATGTaGCACCAAGGAGGGAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: QLHSIISPNHLEVKILQRAQSNM*HQGGKE Trigger: TTCTTTCCCTCCTTGGTGCAACATGTTACTCTGTGC...TCTTTGGAGGATCTTTACTTCGAGGTGATTGGGTGAAATAATTGAATGCAATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| 3UTR TCA 72 bp | TATACAAGGCAAATCCTTTTCACTTGTCCAAAGCACTaGCAGTCTAGGCTGTGTACCTTCAACATTTCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: YTRQILFTCPKH*QSRLCTFNISL Trigger: TAAGGAAATGTTGAAGGTACACAGCCTAGACTGTCAGTGCTTTGGACAAGTGAAAAGGATTTGCCTTGTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR TCA 72 bp | AAATTCCCCATTTATTTACAGTCCAATCTATCACTGTaGGGAGGCATAGCTAACTTTACAGAGGCTTTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: KFPIYLQSNLSL*GGIANFTEAFL Trigger: CAGGAAAGCCTCTGTAAAGTTAGCTATGCCTCCTCACAGTGATAGATTGGACTGTAAATAAATGGGGAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| 3UTR GCA 72 bp | TACATACTGAGCAATGTTGTGTTTAGAGCAAAGAGCTaGTCAGAATGGTTAGCGAAAACAGACATGTCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: YILSNVVFRAKS*SEWLAKTDMSR Trigger: TCTTGACATGTCTGTTTTCGCTAACCATTCTGAGCAGCTCTTTGCTCTAAACACAACATTGCTCAGTATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR CCA 72 bp | AGCAATGTTGTGTTTAGAGCAAAGAGCTGCTCAGAATaGTTAGCGAAAACAGACATGTCAAGAGAAAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: SNVVFRAKSCSE*LAKTDMSRERR Trigger: TCTTCTTTCTCTTGACATGTCTGTTTTCGCTAACCATTCTGAGCAGCTCTTTGCTCTAAACACAACATTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR TCA 72 bp | ATTATCCATTCAAAACCCAGACAATTGTACTCTAGTTaGCAACATCCGAGGAAATCTGAGGTGAAAAATCCC | + |
|
Preference number: 3 (lower is better) Translates to: IIHSKPRQLYSS*QHPRKSEVKNP Trigger: GGGATTTTTCACCTCAGATTTCCTCGGATGTTGTCAACTAGAGTACAATTGTCTGGGTTTTGAATGGATAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR-3UTR CAA 90 bp | CAATTGCATTCAATTATTTCACCCAATCACCTCGAAGTAAAGATCCTCCAAAGAATTTTAGGTAAGGATTaGCAAATAGGGACAGGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: QLHSIISPNHLEVKILQRILGKD*QIGTGG Trigger: TCCTCCTGTCCCTATTTGCAAATCCTTACCTAAAAT...TCTTTGGAGGATCTTTACTTCGAGGTGATTGGGTGAAATAATTGAATGCAATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| 3UTR TCA 72 bp | AATATATTGCTAATACACAGTGATTCATTGCAAAGATaGCCAGCTTGCACTGACCCAGTATGGAAAACACTT | + |
|
Preference number: 3 (lower is better) Translates to: NILLIHSDSLQR*PACTDPVWKTL Trigger: AAGTGTTTTCCATACTGGGTCAGTGCAAGCTGGTCATCTTTGCAATGAATCACTGTGTATTAGCAATATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| 3UTR GCA 72 bp | ATTAGTTTGGAAAGTAGGGTCACTGACCTGGAACTATaGAGACCATTTATTATCATATCATTTGATCAACCT | + |
|
Preference number: 3 (lower is better) Translates to: ISLESRVTDLEL*RPFIIISFDQP Trigger: AGGTTGATCAAATGATATGATAATAAATGGTCTGCATAGTTCCAGGTCAGTGACCCTACTTTCCAAACTAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| CDS-3UTR TCA 90 bp | AACAAGAGAGCTGAAAAGCCCAGAGGAGACCAACACGGAGAGTCCCACATCTGTACAGCAGTCTTCGGGTaGGGAGGCTGCTTTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NKRAEKPRGDQHGESHICTAVFG*GGCFWG Trigger: TCCCCAAAAGCAGCCTCCTCACCCGAAGACTGCTGT...ACAGATGTGGGACTCTCCGTGTTGGTCTCCTCTGGGCTTTTCAGCTCTCTTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR CAA 72 bp | GCATTGGCAAGTGTTTCTGAGAGCGGAGTAAAAGGATaGGGCAGGGCTGGAGTGGGTGAGTGCTATGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALASVSESGVKG*GRAGVGECYVL Trigger: CAGCACATAGCACTCACCCACTCCAGCCCTGCCCAATCCTTTTACTCCGCTCTCAGAAACACTTGCCAATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125326.8 ENSMUST00000140516.8 |
||
| 3UTR CAA 72 bp | CCATTGCTCATCCTTGTGTGGCCGCCATTCTTTATCTaGCCTGTTTCCTCCTTGCCGGGTTCCTGTGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PLLILVWPPFFI*PVSSLPGSCAD Trigger: ATCAGCACAGGAACCCGGCAAGGAGGAAACAGGCAAGATAAAGAATGGCGGCCACACAAGGATGAGCAATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| CDS-3UTR GCA 90 bp | GAGTGGGTGAGTGCTATGTGCTGGCAGCAAGGGAACTGGAAGATGGCTCACAAACGCCATTCTTTATCTTaGCTGTTTCCTCCTTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: EWVSAMCWQQGNWKMAHKRHSLS*LFPPCR Trigger: CCGGCAAGGAGGAAACAGGCAAGATAAAGAATGGCG...TTTGTGAGCCATCTTCCAGTTCCCTTGCTGCCAGCACATAGCACTCACCCACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| CDS-3UTR GCA 90 bp | GAGTGGGTGAGTGCTATGTGCTGGCAGCAAGGGAACTGGAAGATGGCTCACAAAGAATTCCATTCCCATTaGTCATCCTTGTGTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: EWVSAMCWQQGNWKMAHKEFHSH*SSLCGR Trigger: GCGGCCACACAAGGATGAGCAATGGGAATGGAATTC...TTTGTGAGCCATCTTCCAGTTCCCTTGCTGCCAGCACATAGCACTCACCCACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| CDS-3UTR GCA 90 bp | CCACATACATCCGGCGAAAGGAAGAATTTCAGAGCTTACTTAGAAGGAATGGGTTGCACGGACCCCAGCTaGTTAGGTGCTGGGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PHTSGERKNFRAYLEGMGCTDPS*LGAGCR Trigger: CCTGCACCCAGCACCTAAGCAGCTGGGGTCCGTGCA...ACCCATTCCTTCTAAGTAAGCTCTGAAATTCTTCCTTTCGCCGGATGTATGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190255.7 |
||
| CDS-3UTR CCA 90 bp | AACAAGAGAGCTGAAAAGCCCAGAGGAGACCAACACGGAGAGTCCCACATCTGTAAGGATTTGGCCAAATaGACTGGTCCCGCATCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NKRAEKPRGDQHGESHICKDLAK*TGPASA Trigger: GGCTGATGCGGGACCAGTCCATTTGGCCAAATCCTT...ACAGATGTGGGACTCTCCGTGTTGGTCTCCTCTGGGCTTTTCAGCTCTCTTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CCA 90 bp | TGGGTATGTGGAAATACTAAGGTTGCCATTATATTTGACGCAGCGAATCAAAGCGAGTGGCAGCGACAGTaGCAGCCGCCCGCGCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: WVCGNTKVAIIFDAANQSEWQRQ*QPPALT Trigger: AGTCAGCGCGGGCGGCTGCCACTGTCGCTGCCACTC...GCTTTGATTCGCTGCGTCAAATATAATGGCAACCTTAGTATTTCCACATACCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190255.7 |
||
| CDS-3UTR CCA 90 bp | GTCCCACATCTGTTTACGGCTCTGCCCAATGTTTGTGCTTACTTAGAATTAAAAGGCCCCATCACGCCCTaGCAGCCTGACCACGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VPHLFTALPNVCAYLELKGPITP*QPDHVP Trigger: AGGGACGTGGTCAGGCTGCCAGGGCGTGATGGGGCC...TTTTAATTCTAAGTAAGCACAAACATTGGGCAGAGCCGTAAACAGATGTGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190255.7 |
||
| CDS-3UTR TCA 90 bp | AATGTGATCTTCTTCAGAGCACTCTGGCAGAACAAGAGAGCTGAAAAGCCCAGAACAGCAGTCTTCGGGTaGGGAGGCTGCTTTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NVIFFRALWQNKRAEKPRTAVFG*GGCFWG Trigger: TCCCCAAAAGCAGCCTCCTCACCCGAAGACTGCTGT...TCTGGGCTTTTCAGCTCTCTTGTTCTGCCAGAGTGCTCTGAAGAAGATCACATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR TCA 90 bp | AACCTGGTTCATCCTTTACAGCTCCCATCCTGCTTGCTTCCATTACACTTCCTGCACAACAGGCATCCATaGTGCCGCAGTCCATGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: NLVHPLQLPSCLLPLHFLHNRHP*CRSPCH Trigger: GTGACATGGACTGCGGCATCATGGATGCCTGTTGTG...CAGGAAGTGTAATGGAAGCAAGCAGGATGGGAGCTGTAAAGGATGAACCAGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR GCA 90 bp | AACCTGGTTCATCCTTTACAGCTCCCATCCTGCTTGCTTCCATTACACTTCCTGTGCCTGTTTCCTCCTTaGCGGGTTCCTGTGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: NLVHPLQLPSCLLPLHFLCLFPP*RVPVLM Trigger: CATCAGCACAGGAACCCGGCAAGGAGGAAACAGGCA...CAGGAAGTGTAATGGAAGCAAGCAGGATGGGAGCTGTAAAGGATGAACCAGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR GCA 90 bp | AACAAGAGAGCTGAAAAGCCCAGAGGAGACCAACACGGAGAGTCCCACATCTGTGTCCCAGGACAATGTTaGAGAGGGTCAGGAATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: NKRAEKPRGDQHGESHICVPGQC*RGSGIH Trigger: GTGAATTCCTGACCCTCTGCAACATTGTCCTGGGAC...ACAGATGTGGGACTCTCCGTGTTGGTCTCCTCTGGGCTTTTCAGCTCTCTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR TCA 90 bp | CCACATACATCCGGCGAAAGGAAGAATTTCAGAGCTTACTTAGAAGGAATGGGTACAGCAGTCTTCGGGTaGGGAGGCTGCTTTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PHTSGERKNFRAYLEGMGTAVFG*GGCFWG Trigger: TCCCCAAAAGCAGCCTCCTCACCCGAAGACTGCTGT...ACCCATTCCTTCTAAGTAAGCTCTGAAATTCTTCCTTTCGCCGGATGTATGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CCA 90 bp | AAGAGCTGCTCAGAATGGTTAGCGAAAACAGACATGTCAAGAGAAAGAAGACATTCATTACATGCTTCGTaGGCCGGGGAGCCCAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KSCSEWLAKTDMSRERRHSLHAS*AGEPSR Trigger: CCGGCTGGGCTCCCCGGCCCACGAAGCATGTAATGA...ATGTCTTCTTTCTCTTGACATGTCTGTTTTCGCTAACCATTCTGAGCAGCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CCA 90 bp | GTCCCACATCTGTTTACGGCTCTGCCCAATGTTTGTGCTTACTTAGAATTAAAATCATTACATGCTTCGTaGGCCGGGGAGCCCAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VPHLFTALPNVCAYLELKSLHAS*AGEPSR Trigger: CCGGCTGGGCTCCCCGGCCCACGAAGCATGTAATGA...TTTTAATTCTAAGTAAGCACAAACATTGGGCAGAGCCGTAAACAGATGTGGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR CAA 72 bp | TGGCTCCGTGAGGAATTCCATTCCCATTGCTCATCCTaGTGTGGCCGCCATTCTTTATCTTGCCTGTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WLREEFHSHCSS*CGRHSLSCLFP Trigger: AGGAAACAGGCAAGATAAAGAATGGCGGCCACACAAGGATGAGCAATGGGAATGGAATTCCTCACGGAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| CDS-3UTR TCA 90 bp | CCACATACATCCGGCGAAAGGAAGAATTTCAGAGCTTACTTAGAAGGAATGGGTGCTGATGTCTGGAGTTaGGGCAGACGTTCAGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PHTSGERKNFRAYLEGMGADVWS*GRRSGW Trigger: CCAACCTGAACGTCTGCCTCAACTCCAGACATCAGC...ACCCATTCCTTCTAAGTAAGCTCTGAAATTCTTCCTTTCGCCGGATGTATGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR TCA 90 bp | TTCCTCCAGGCCTTCTTCTGTAACCTGTTATTCACTTCTGTATGTTCCTATGGCCACAACAGGCATCCATaGTGCCGCAGTCCATGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FLQAFFCNLLFTSVCSYGHNRHP*CRSPCH Trigger: GTGACATGGACTGCGGCATCATGGATGCCTGTTGTG...GCCATAGGAACATACAGAAGTGAATAACAGGTTACAGAAGAAGGCCTGGAGGAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR GCA 90 bp | ACAGTGCAAATACTGAGTTGTTTCATGGGAGTCTTACCATGCGCCTTTCTTTCCCTTCGGAGGTGCAGATaGCACACGAAGCTTGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TVQILSCFMGVLPCAFLSLRRCR*HTKLVP Trigger: TGGGACAAGCTTCGTGTGGCATCTGCACCTCCGAAG...GGAAAGAAAGGCGCATGGTAAGACTCCCATGAAACAACTCAGTATTTGCACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR GCA 90 bp | CCACATACATCCGGCGAAAGGAAGAATTTCAGAGCTTACTTAGAAGGAATGGGTCTTCGGAGGTGCAGATaGCACACGAAGCTTGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PHTSGERKNFRAYLEGMGLRRCR*HTKLVP Trigger: TGGGACAAGCTTCGTGTGGCATCTGCACCTCCGAAG...ACCCATTCCTTCTAAGTAAGCTCTGAAATTCTTCCTTTCGCCGGATGTATGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CCA 90 bp | CAGGAGGAAGAACAGAAGGTTATACACAGGCTGGGAATAATTTACAACCTTAATTCATTACATGCTTCGTaGGCCGGGGAGCCCAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: QEEEQKVIHRLGIIYNLNSLHAS*AGEPSR Trigger: CCGGCTGGGCTCCCCGGCCCACGAAGCATGTAATGA...ATTAAGGTTGTAAATTATTCCCAGCCTGTGTATAACCTTCTGTTCTTCCTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| CDS-3UTR CCA 90 bp | GTCTTTCCAAATATAAGGCAGCTTTGGAAAAACCCCAAGGAATACTGGGATTTTTCATTACATGCTTCGTaGGCCGGGGAGCCCAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VFPNIRQLWKNPKEYWDFSLHAS*AGEPSR Trigger: CCGGCTGGGCTCCCCGGCCCACGAAGCATGTAATGA...AAAATCCCAGTATTCCTTGGGGTTTTTCCAAAGCTGCCTTATATTTGGAAAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CCA 90 bp | AATGTGATCTTCTTCAGAGCACTCTGGCAGAACAAGAGAGCTGAAAAGCCCAGAAAGGATTTGGCCAAATaGACTGGTCCCGCATCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NVIFFRALWQNKRAEKPRKDLAK*TGPASA Trigger: GGCTGATGCGGGACCAGTCCATTTGGCCAAATCCTT...TCTGGGCTTTTCAGCTCTCTTGTTCTGCCAGAGTGCTCTGAAGAAGATCACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CCA 90 bp | TTCAGAGGCGACACCACAGTCAACAGGTTCAAGGTAAAACTGAGCTTCAAGACAAAGGATTTGGCCAAATaGACTGGTCCCGCATCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FRGDTTVNRFKVKLSFKTKDLAK*TGPASA Trigger: GGCTGATGCGGGACCAGTCCATTTGGCCAAATCCTT...TGTCTTGAAGCTCAGTTTTACCTTGAACCTGTTGACTGTGGTGTCGCCTCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| 3UTR CAA 72 bp | TCTCTTGCTGGCCCAGTCAGGTCAGTTTCTGGAATCTaGCTGGATACACACCATTCGTCATCCTCAAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLAGPVRSVSGI*LDTHHSSSSNS Trigger: GGAATTTGAGGATGACGAATGGTGTGTATCCAGCAAGATTCCAGAAACTGACCTGACTGGGCCAGCAAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| 3UTR CAA 72 bp | CGATGTCCCACTCACCTTCGGGTGAGGAGGCTGCTTTaGGGGAAAAGACAGCATTTACTTTACTCTTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: RCPTHLRVRRLL*GKRQHLLYSSY Trigger: GTAAGAAGAGTAAAGTAAATGCTGTCTTTTCCCCAAAAGCAGCCTCCTCACCCGAAGGTGAGTGGGACATCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| CDS-3UTR TCA 90 bp | AATGTGATCTTCTTCAGAGCACTCTGGCAGAACAAGAGAGCTGAAAAGCCCAGAGTTCAGGTTGGGTTCTaGCAAGTTCACCAGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NVIFFRALWQNKRAEKPRVQVGF*QVHQLK Trigger: CTTCAGCTGGTGAACTTGTCAGAACCCAACCTGAAC...TCTGGGCTTTTCAGCTCTCTTGTTCTGCCAGAGTGCTCTGAAGAAGATCACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR TCA 90 bp | GAAATAATAACTAGCTTTCTTGAGGTCACAGAGCATTGGCAAGTGTTTCTGAGACCACTCACCTTCGGGTaGGGAGGCTGCTTTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: EIITSFLEVTEHWQVFLRPLTFG*GGCFWG Trigger: TCCCCAAAAGCAGCCTCCTCACCCGAAGGTGAGTGG...TCTCAGAAACACTTGCCAATGCTCTGTGACCTCAAGAAAGCTAGTTATTATTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| CDS-3UTR GCA 90 bp | AATGTGATCTTCTTCAGAGCACTCTGGCAGAACAAGAGAGCTGAAAAGCCCAGACGCCATTCTTTATCTTaGCTGTTTCCTCCTTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: NVIFFRALWQNKRAEKPRRHSLS*LFPPCR Trigger: CCGGCAAGGAGGAAACAGGCAAGATAAAGAATGGCG...TCTGGGCTTTTCAGCTCTCTTGTTCTGCCAGAGTGCTCTGAAGAAGATCACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR GCA 90 bp | CCACAGTGCCATATCTTCCTCCAGGCCTTCTTCTGTAACCTGTTATTCACTTCTCGCCATTCTTTATCTTaGCTGTTTCCTCCTTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PQCHIFLQAFFCNLLFTSRHSLS*LFPPCR Trigger: CCGGCAAGGAGGAAACAGGCAAGATAAAGAATGGCG...AGAAGTGAATAACAGGTTACAGAAGAAGGCCTGGAGGAAGATATGGCACTGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR GCA 90 bp | AATGTGATCTTCTTCAGAGCACTCTGGCAGAACAAGAGAGCTGAAAAGCCCAGAGAATTCCATTCCCATTaGTCATCCTTGTGTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: NVIFFRALWQNKRAEKPREFHSH*SSLCGR Trigger: GCGGCCACACAAGGATGAGCAATGGGAATGGAATTC...TCTGGGCTTTTCAGCTCTCTTGTTCTGCCAGAGTGCTCTGAAGAAGATCACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CCA 90 bp | GTCCCACATCTGTTTACGGCTCTGCCCAATGTTTGTGCTTACTTAGAATTAAAAAGCCCACACCTGGTATaGCCACTGGTAGCTGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VPHLFTALPNVCAYLELKSPHLV*PLVAGL Trigger: AAGGCCAGCTACCAGTGGCCATACCAGGTGTGGGCT...TTTTAATTCTAAGTAAGCACAAACATTGGGCAGAGCCGTAAACAGATGTGGGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CCA 90 bp | CCACATACATCCGGCGAAAGGAAGAATTTCAGAGCTTACTTAGAAGGAATGGGTAAGGATTTGGCCAAATaGACTGGTCCCGCATCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PHTSGERKNFRAYLEGMGKDLAK*TGPASA Trigger: GGCTGATGCGGGACCAGTCCATTTGGCCAAATCCTT...ACCCATTCCTTCTAAGTAAGCTCTGAAATTCTTCCTTTCGCCGGATGTATGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CCA 90 bp | ACAGTGCAAATACTGAGTTGTTTCATGGGAGTCTTACCATGCGCCTTTCTTTCCAAGGATTTGGCCAAATaGACTGGTCCCGCATCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TVQILSCFMGVLPCAFLSKDLAK*TGPASA Trigger: GGCTGATGCGGGACCAGTCCATTTGGCCAAATCCTT...GGAAAGAAAGGCGCATGGTAAGACTCCCATGAAACAACTCAGTATTTGCACTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CCA 90 bp | AACAAGAGAGCTGAAAAGCCCAGAGGAGACCAACACGGAGAGTCCCACATCTGTACAGACAAGCTGGACTaGATTTTTCTGTGCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NKRAEKPRGDQHGESHICTDKLD*IFLCIF Trigger: GAAGATGCACAGAAAAATCCAGTCCAGCTTGTCTGT...ACAGATGTGGGACTCTCCGTGTTGGTCTCCTCTGGGCTTTTCAGCTCTCTTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CCA 90 bp | CACAGAGCATTGGCAAGTGTTTCTGAGAGCGGAGTAAAAGGATTGGGCAGGGCTACAGACAAGCTGGACTaGATTTTTCTGTGCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HRALASVSESGVKGLGRATDKLD*IFLCIF Trigger: GAAGATGCACAGAAAAATCCAGTCCAGCTTGTCTGT...AGCCCTGCCCAATCCTTTTACTCCGCTCTCAGAAACACTTGCCAATGCTCTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| CDS-3UTR CCA 90 bp | AGCTGCTCAGAATGGTTAGCGAAAACAGACATGTCAAGAGAAAGAAGACATTTACAGCTGCTTAGGTGCTaGGTGCAGGAAACGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SCSEWLAKTDMSRERRHLQLLRC*VQETAC Trigger: GCAGGCCGTTTCCTGCACCCAGCACCTAAGCAGCTG...TAAATGTCTTCTTTCTCTTGACATGTCTGTTTTCGCTAACCATTCTGAGCAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190255.7 |
||
| CDS-3UTR TCA 90 bp | TTCAGAGGCGACACCACAGTCAACAGGTTCAAGGTAAAACTGAGCTTCAAGACAGACAAGTTCACCAGCTaGAGGATTTGGCCAAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: FRGDTTVNRFKVKLSFKTDKFTS*RIWPNG Trigger: TCCATTTGGCCAAATCCTTCAGCTGGTGAACTTGTC...TGTCTTGAAGCTCAGTTTTACCTTGAACCTGTTGACTGTGGTGTCGCCTCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| CDS-3UTR TCA 90 bp | AATACGACACAACGAACCATCCAAAGAGCATCTGCAGGTTTCATCATATTGAGTGCTGATGTCTGGAGTTaGGGCAGACGTTCAGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NTTQRTIQRASAGFIILSADVWS*GRRSGW Trigger: CCAACCTGAACGTCTGCCTCAACTCCAGACATCAGC...ACTCAATATGATGAAACCTGCAGATGCTCTTTGGATGGTTCGTTGTGTCGTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| CDS-3UTR TCA 90 bp | CTTCTGTTTCAAAGACGAGGAGGAAGGCAGCTGTACATTAGCATCGTATTTAAAGCTGATGTCTGGAGTTaGGGCAGACGTTCAGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLFQRRGGRQLYISIVFKADVWS*GRRSGW Trigger: CCAACCTGAACGTCTGCCTCAACTCCAGACATCAGC...TTTAAATACGATGCTAATGTACAGCTGCCTTCCTCCTCGTCTTTGAAACAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR TCA 90 bp | GTCCCACATCTGTTTACGGCTCTGCCCAATGTTTGTGCTTACTTAGAATTAAAACACAACAGGCATCCATaGTGCCGCAGTCCATGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VPHLFTALPNVCAYLELKHNRHP*CRSPCH Trigger: GTGACATGGACTGCGGCATCATGGATGCCTGTTGTG...TTTTAATTCTAAGTAAGCACAAACATTGGGCAGAGCCGTAAACAGATGTGGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR TCA 90 bp | AAGAGCTGCTCAGAATGGTTAGCGAAAACAGACATGTCAAGAGAAAGAAGACATCACAACAGGCATCCATaGTGCCGCAGTCCATGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KSCSEWLAKTDMSRERRHHNRHP*CRSPCH Trigger: GTGACATGGACTGCGGCATCATGGATGCCTGTTGTG...ATGTCTTCTTTCTCTTGACATGTCTGTTTTCGCTAACCATTCTGAGCAGCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR GCA 90 bp | TGGGTATGTGGAAATACTAAGGTTGCCATTATATTTGACGCAGCGAATCAAAGCTGCCTGTTTCCTCCTTaGCGGGTTCCTGTGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: WVCGNTKVAIIFDAANQSCLFPP*RVPVLM Trigger: CATCAGCACAGGAACCCGGCAAGGAGGAAACAGGCA...GCTTTGATTCGCTGCGTCAAATATAATGGCAACCTTAGTATTTCCACATACCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR GCA 90 bp | AACCTGGTTCATCCTTTACAGCTCCCATCCTGCTTGCTTCCATTACACTTCCTGTGCCACAGCATTCCATaGAGATTTCTAGACAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NLVHPLQLPSCLLPLHFLCHSIP*RFLDSL Trigger: CAGACTGTCTAGAAATCTGCATGGAATGCTGTGGCA...CAGGAAGTGTAATGGAAGCAAGCAGGATGGGAGCTGTAAAGGATGAACCAGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR GCA 90 bp | GAGTGGGTGAGTGCTATGTGCTGGCAGCAAGGGAACTGGAAGATGGCTCACAAACAGGAGAAAGGAATGTaGTTTCAAATGTCAATGCTA | + |
|
Preference number: 4 (lower is better) Translates to: EWVSAMCWQQGNWKMAHKQEKGM*FQMSML Trigger: TAGCATTGACATTTGAAAGCACATTCCTTTCTCCTG...TTTGTGAGCCATCTTCCAGTTCCCTTGCTGCCAGCACATAGCACTCACCCACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| CDS-3UTR CCA 90 bp | CCACATACATCCGGCGAAAGGAAGAATTTCAGAGCTTACTTAGAAGGAATGGGTCCACGGACACATGTTTaGCTCCGTGAGGAATTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PHTSGERKNFRAYLEGMGPRTHV*LREEFH Trigger: ATGGAATTCCTCACGGAGCCAAACATGTGTCCGTGG...ACCCATTCCTTCTAAGTAAGCTCTGAAATTCTTCCTTTCGCCGGATGTATGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR CAA 72 bp | ACTGAGCTTCAAGACAAGACACCCTCTTTCCACAGCTaGGCCTATATGTGGTTTGCCGTATTGACCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TELQDKTPSFHS*AYMWFAVLTFS Trigger: AGAGAAGGTCAATACGGCAAACCACATATAGGCCAAGCTGTGGAAAGAGGGTGTCTTGTCTTGAAGCTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| CDS-3UTR TCA 90 bp | CCACATACATCCGGCGAAAGGAAGAATTTCAGAGCTTACTTAGAAGGAATGGGTGACAAGTTCACCAGCTaGAGGATTTGGCCAAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: PHTSGERKNFRAYLEGMGDKFTS*RIWPNG Trigger: TCCATTTGGCCAAATCCTTCAGCTGGTGAACTTGTC...ACCCATTCCTTCTAAGTAAGCTCTGAAATTCTTCCTTTCGCCGGATGTATGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR TCA 90 bp | ACAGTGCAAATACTGAGTTGTTTCATGGGAGTCTTACCATGCGCCTTTCTTTCCGACAAGTTCACCAGCTaGAGGATTTGGCCAAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: TVQILSCFMGVLPCAFLSDKFTS*RIWPNG Trigger: TCCATTTGGCCAAATCCTTCAGCTGGTGAACTTGTC...GGAAAGAAAGGCGCATGGTAAGACTCCCATGAAACAACTCAGTATTTGCACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR TCA 90 bp | TTCCTCCAGGCCTTCTTCTGTAACCTGTTATTCACTTCTGTATGTTCCTATGGCGACAAGTTCACCAGCTaGAGGATTTGGCCAAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: FLQAFFCNLLFTSVCSYGDKFTS*RIWPNG Trigger: TCCATTTGGCCAAATCCTTCAGCTGGTGAACTTGTC...GCCATAGGAACATACAGAAGTGAATAACAGGTTACAGAAGAAGGCCTGGAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR TCA 90 bp | AGCTGCTCAGAATGGTTAGCGAAAACAGACATGTCAAGAGAAAGAAGACATTTAGCTGATGTCTGGAGTTaGGGCAGACGTTCAGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SCSEWLAKTDMSRERRHLADVWS*GRRSGW Trigger: CCAACCTGAACGTCTGCCTCAACTCCAGACATCAGC...TAAATGTCTTCTTTCTCTTGACATGTCTGTTTTCGCTAACCATTCTGAGCAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR GCA 90 bp | AGCTGCTCAGAATGGTTAGCGAAAACAGACATGTCAAGAGAAAGAAGACATTTATGCCTGTTTCCTCCTTaGCGGGTTCCTGTGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SCSEWLAKTDMSRERRHLCLFPP*RVPVLM Trigger: CATCAGCACAGGAACCCGGCAAGGAGGAAACAGGCA...TAAATGTCTTCTTTCTCTTGACATGTCTGTTTTCGCTAACCATTCTGAGCAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR GCA 90 bp | TGGCTTAAATACATACTGAGCAATGTTGTGTTTAGAGCAAAGAGCTGCTCAGAATGCCTGTTTCCTCCTTaGCGGGTTCCTGTGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: WLKYILSNVVFRAKSCSECLFPP*RVPVLM Trigger: CATCAGCACAGGAACCCGGCAAGGAGGAAACAGGCA...TTCTGAGCAGCTCTTTGCTCTAAACACAACATTGCTCAGTATGTATTTAAGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR GCA 90 bp | GTCTTTCCAAATATAAGGCAGCTTTGGAAAAACCCCAAGGAATACTGGGATTTTCTTCGGAGGTGCAGATaGCACACGAAGCTTGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VFPNIRQLWKNPKEYWDFLRRCR*HTKLVP Trigger: TGGGACAAGCTTCGTGTGGCATCTGCACCTCCGAAG...AAAATCCCAGTATTCCTTGGGGTTTTTCCAAAGCTGCCTTATATTTGGAAAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR GCA 90 bp | CAATTGCATTCAATTATTTCACCCAATCACCTCGAAGTAAAGATCCTCCAAAGATGCCTGTTTCCTCCTTaGCGGGTTCCTGTGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: QLHSIISPNHLEVKILQRCLFPP*RVPVLM Trigger: CATCAGCACAGGAACCCGGCAAGGAGGAAACAGGCA...TCTTTGGAGGATCTTTACTTCGAGGTGATTGGGTGAAATAATTGAATGCAATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTGTTTCAAAGACGAGGAGGAAGGCAGCTGTACATTAGCATCGTATTTAAACGCCATTCTTTATCTTaGCTGTTTCCTCCTTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LLFQRRGGRQLYISIVFKRHSLS*LFPPCR Trigger: CCGGCAAGGAGGAAACAGGCAAGATAAAGAATGGCG...TTTAAATACGATGCTAATGTACAGCTGCCTTCCTCCTCGTCTTTGAAACAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR GCA 90 bp | CTTCTGTTTCAAAGACGAGGAGGAAGGCAGCTGTACATTAGCATCGTATTTAAAGTCCCAGGACAATGTTaGAGAGGGTCAGGAATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLFQRRGGRQLYISIVFKVPGQC*RGSGIH Trigger: GTGAATTCCTGACCCTCTGCAACATTGTCCTGGGAC...TTTAAATACGATGCTAATGTACAGCTGCCTTCCTCCTCGTCTTTGAAACAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR GCA 90 bp | CCACATACATCCGGCGAAAGGAAGAATTTCAGAGCTTACTTAGAAGGAATGGGTTGCCACAGCATTCCATaGAGATTTCTAGACAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PHTSGERKNFRAYLEGMGCHSIP*RFLDSL Trigger: CAGACTGTCTAGAAATCTGCATGGAATGCTGTGGCA...ACCCATTCCTTCTAAGTAAGCTCTGAAATTCTTCCTTTCGCCGGATGTATGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CCA 90 bp | AACCTGGTTCATCCTTTACAGCTCCCATCCTGCTTGCTTCCATTACACTTCCTGTGTTTACAGACAAGCTaGACTGGATTTTTCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NLVHPLQLPSCLLPLHFLCLQTS*TGFFCA Trigger: TGCACAGAAAAATCCAGTCCAGCTTGTCTGTAAACA...CAGGAAGTGTAATGGAAGCAAGCAGGATGGGAGCTGTAAAGGATGAACCAGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR CAA 72 bp | TTCTGTATGTTCCTATGGCCTCTTGCCTTTACAGTCTaGAAGCCAGCATGCTTTGAAACCTGGTTCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FCMFLWPLAFTV*KPACFETWFIL Trigger: AAGGATGAACCAGGTTTCAAAGCATGCTGGCTTCAAGACTGTAAAGGCAAGAGGCCATAGGAACATACAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR CAA 72 bp | CCCAATCACCTCGAAGTAAAGATCCTCCAAAGAAAATaGCATTGCCTTCTCAACTCCTTGGAGAGCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PNHLEVKILQRK*HCLLNSLESQF Trigger: AAACTGGCTCTCCAAGGAGTTGAGAAGGCAATGCAATTTTCTTTGGAGGATCTTTACTTCGAGGTGATTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| 3UTR CAA 72 bp | CATGGACGGGTCTCTGCAACATGTTTGATACTTTCCTaGGTGTTTCATTCTCCTCATGCTCCCAATTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: HGRVSATCLILS*VFHSPHAPNLI Trigger: GATCAAATTGGGAGCATGAGGAGAATGAAACACCAAGGAAAGTATCAAACATGTTGCAGAGACCCGTCCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| CDS-3UTR TCA 90 bp | TTACAGACAAGCTGGACTGGATTTTTCTGTGCATCTTCTGAGAAACGGGGGCTGAAAGGCACATGTATGTaGATCATCTTTGTTCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: LQTSWTGFFCASSEKRGLKGTCM*IIFVQI Trigger: GATCTGAACAAAGATGATTCACATACATGTGCCTTT...CAGCCCCCGTTTCTCAGAAGATGCACAGAAAAATCCAGTCCAGCTTGTCTGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| CDS-3UTR TCA 90 bp | ATGCAAGCAGGTAATCTTATCTCTACTGCACAGAGTAACATGTTGCACCAAGGATTCCAGCTTCATTCCTaGGACTACAAAAGGACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: MQAGNLISTAQSNMLHQGFQLHS*DYKRTE Trigger: CTCTGTCCTTTTGTAGTCTCAGGAATGAAGCTGGAA...TCCTTGGTGCAACATGTTACTCTGTGCAGTAGAGATAAGATTACCTGCTTGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| CDS-3UTR GCA 90 bp | TGGCTTAAATACATACTGAGCAATGTTGTGTTTAGAGCAAAGAGCTGCTCAGAACGCCATTCTTTATCTTaGCTGTTTCCTCCTTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: WLKYILSNVVFRAKSCSERHSLS*LFPPCR Trigger: CCGGCAAGGAGGAAACAGGCAAGATAAAGAATGGCG...TTCTGAGCAGCTCTTTGCTCTAAACACAACATTGCTCAGTATGTATTTAAGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR GCA 90 bp | ATAAAGAACCGAGTCTTTCCAAATATAAGGCAGCTTTGGAAAAACCCCAAGGAAGAATTCCATTCCCATTaGTCATCCTTGTGTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: IKNRVFPNIRQLWKNPKEEFHSH*SSLCGR Trigger: GCGGCCACACAAGGATGAGCAATGGGAATGGAATTC...TTCCTTGGGGTTTTTCCAAAGCTGCCTTATATTTGGAAAGACTCGGTTCTTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR GCA 90 bp | TGGCTTAAATACATACTGAGCAATGTTGTGTTTAGAGCAAAGAGCTGCTCAGAAGAATTCCATTCCCATTaGTCATCCTTGTGTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: WLKYILSNVVFRAKSCSEEFHSH*SSLCGR Trigger: GCGGCCACACAAGGATGAGCAATGGGAATGGAATTC...TTCTGAGCAGCTCTTTGCTCTAAACACAACATTGCTCAGTATGTATTTAAGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR GCA 90 bp | TGGCTTAAATACATACTGAGCAATGTTGTGTTTAGAGCAAAGAGCTGCTCAGAAGTCCCAGGACAATGTTaGAGAGGGTCAGGAATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: WLKYILSNVVFRAKSCSEVPGQC*RGSGIH Trigger: GTGAATTCCTGACCCTCTGCAACATTGTCCTGGGAC...TTCTGAGCAGCTCTTTGCTCTAAACACAACATTGCTCAGTATGTATTTAAGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR GCA 90 bp | ATAAAGAACCGAGTCTTTCCAAATATAAGGCAGCTTTGGAAAAACCCCAAGGAAGTCCCAGGACAATGTTaGAGAGGGTCAGGAATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: IKNRVFPNIRQLWKNPKEVPGQC*RGSGIH Trigger: GTGAATTCCTGACCCTCTGCAACATTGTCCTGGGAC...TTCCTTGGGGTTTTTCCAAAGCTGCCTTATATTTGGAAAGACTCGGTTCTTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CCA 90 bp | CAGGAGGAAGAACAGAAGGTTATACACAGGCTGGGAATAATTTACAACCTTAATCCACGGACACATGTTTaGCTCCGTGAGGAATTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QEEEQKVIHRLGIIYNLNPRTHV*LREEFH Trigger: ATGGAATTCCTCACGGAGCCAAACATGTGTCCGTGG...ATTAAGGTTGTAAATTATTCCCAGCCTGTGTATAACCTTCTGTTCTTCCTCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| CDS-3UTR CCA 90 bp | ATAAAGAACCGAGTCTTTCCAAATATAAGGCAGCTTTGGAAAAACCCCAAGGAACCACGGACACATGTTTaGCTCCGTGAGGAATTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: IKNRVFPNIRQLWKNPKEPRTHV*LREEFH Trigger: ATGGAATTCCTCACGGAGCCAAACATGTGTCCGTGG...TTCCTTGGGGTTTTTCCAAAGCTGCCTTATATTTGGAAAGACTCGGTTCTTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR GCA 90 bp | CATATTAAACCACATACATCCGGCGAAAGGAAGAATTTCAGAGCTTACTTAGAAGAATTCCATTCCCATTaGTCATCCTTGTGTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: HIKPHTSGERKNFRAYLEEFHSH*SSLCGR Trigger: GCGGCCACACAAGGATGAGCAATGGGAATGGAATTC...TTCTAAGTAAGCTCTGAAATTCTTCCTTTCGCCGGATGTATGTGGTTTAATATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CCA 90 bp | CATATTAAACCACATACATCCGGCGAAAGGAAGAATTTCAGAGCTTACTTAGAACCACGGACACATGTTTaGCTCCGTGAGGAATTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: HIKPHTSGERKNFRAYLEPRTHV*LREEFH Trigger: ATGGAATTCCTCACGGAGCCAAACATGTGTCCGTGG...TTCTAAGTAAGCTCTGAAATTCTTCCTTTCGCCGGATGTATGTGGTTTAATATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CCA 90 bp | ACAGTGCAAATACTGAGTTGTTTCATGGGAGTCTTACCATGCGCCTTTCTTTCCTGTTTACAGACAAGCTaGACTGGATTTTTCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TVQILSCFMGVLPCAFLSCLQTS*TGFFCA Trigger: TGCACAGAAAAATCCAGTCCAGCTTGTCTGTAAACA...GGAAAGAAAGGCGCATGGTAAGACTCCCATGAAACAACTCAGTATTTGCACTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CCA 90 bp | TTTGAAACCTGGTTCATCCTTTACAGCTCCCATCCTGCTTGCTTCCATTACACTTGTTTACAGACAAGCTaGACTGGATTTTTCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FETWFILYSSHPACFHYTCLQTS*TGFFCA Trigger: TGCACAGAAAAATCCAGTCCAGCTTGTCTGTAAACA...AGTGTAATGGAAGCAAGCAGGATGGGAGCTGTAAAGGATGAACCAGGTTTCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR GCA 90 bp | TGGCTTAAATACATACTGAGCAATGTTGTGTTTAGAGCAAAGAGCTGCTCAGAATGCCACAGCATTCCATaGAGATTTCTAGACAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WLKYILSNVVFRAKSCSECHSIP*RFLDSL Trigger: CAGACTGTCTAGAAATCTGCATGGAATGCTGTGGCA...TTCTGAGCAGCTCTTTGCTCTAAACACAACATTGCTCAGTATGTATTTAAGCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR GCA 90 bp | ATAAAGAACCGAGTCTTTCCAAATATAAGGCAGCTTTGGAAAAACCCCAAGGAATGCCACAGCATTCCATaGAGATTTCTAGACAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IKNRVFPNIRQLWKNPKECHSIP*RFLDSL Trigger: CAGACTGTCTAGAAATCTGCATGGAATGCTGTGGCA...TTCCTTGGGGTTTTTCCAAAGCTGCCTTATATTTGGAAAGACTCGGTTCTTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR GCA 90 bp | AAGAGCTGCTCAGAATGGTTAGCGAAAACAGACATGTCAAGAGAAAGAAGACATATGAAGGAAAACAGATaGCACAGCATTCCATGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KSCSEWLAKTDMSRERRHMKENR*HSIPCR Trigger: TCTGCATGGAATGCTGTGGCATCTGTTTTCCTTCAT...ATGTCTTCTTTCTCTTGACATGTCTGTTTTCGCTAACCATTCTGAGCAGCTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CCA 90 bp | TGGGTATGTGGAAATACTAAGGTTGCCATTATATTTGACGCAGCGAATCAAAGCACAGACAAGCTGGACTaGATTTTTCTGTGCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WVCGNTKVAIIFDAANQSTDKLD*IFLCIF Trigger: GAAGATGCACAGAAAAATCCAGTCCAGCTTGTCTGT...GCTTTGATTCGCTGCGTCAAATATAATGGCAACCTTAGTATTTCCACATACCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CCA 90 bp | GTCCCACATCTGTTTACGGCTCTGCCCAATGTTTGTGCTTACTTAGAATTAAAAACAGACAAGCTGGACTaGATTTTTCTGTGCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VPHLFTALPNVCAYLELKTDKLD*IFLCIF Trigger: GAAGATGCACAGAAAAATCCAGTCCAGCTTGTCTGT...TTTTAATTCTAAGTAAGCACAAACATTGGGCAGAGCCGTAAACAGATGTGGGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR GCA 90 bp | ATAAAGAACCGAGTCTTTCCAAATATAAGGCAGCTTTGGAAAAACCCCAAGGAAATGAAGGAAAACAGATaGCACAGCATTCCATGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IKNRVFPNIRQLWKNPKEMKENR*HSIPCR Trigger: TCTGCATGGAATGCTGTGGCATCTGTTTTCCTTCAT...TTCCTTGGGGTTTTTCCAAAGCTGCCTTATATTTGGAAAGACTCGGTTCTTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CCA 90 bp | ATAGTATTTAGCCTAACTTCAAGTTGGTTAAGGGCAGATGAGGTGCCATTGAAGTGTTTACAGACAAGCTaGACTGGATTTTTCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IVFSLTSSWLRADEVPLKCLQTS*TGFFCA Trigger: TGCACAGAAAAATCCAGTCCAGCTTGTCTGTAAACA...CTTCAATGGCACCTCATCTGCCCTTAACCAACTTGAAGTTAGGCTAAATACTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| CDS-3UTR GCA 90 bp | CATATTAAACCACATACATCCGGCGAAAGGAAGAATTTCAGAGCTTACTTAGAAATGAAGGAAAACAGATaGCACAGCATTCCATGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HIKPHTSGERKNFRAYLEMKENR*HSIPCR Trigger: TCTGCATGGAATGCTGTGGCATCTGTTTTCCTTCAT...TTCTAAGTAAGCTCTGAAATTCTTCCTTTCGCCGGATGTATGTGGTTTAATATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| 3UTR CAA 72 bp | ATTGGGTATGTGGAAATACTAAGGTTGCCATTATATTaGACGCAGCGAATCAAAGCTTCTGTTTCAAAGACG | + |
|
Preference number: 4 (lower is better) Translates to: IGYVEILRLPLY*TQRIKASVSKT Trigger: CGTCTTTGAAACAGAAGCTTTGATTCGCTGCGTCAAATATAATGGCAACCTTAGTATTTCCACATACCCAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CCA 90 bp | CATATTAAACCACATACATCCGGCGAAAGGAAGAATTTCAGAGCTTACTTAGAATGTTTACAGACAAGCTaGACTGGATTTTTCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HIKPHTSGERKNFRAYLECLQTS*TGFFCA Trigger: TGCACAGAAAAATCCAGTCCAGCTTGTCTGTAAACA...TTCTAAGTAAGCTCTGAAATTCTTCCTTTCGCCGGATGTATGTGGTTTAATATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS CCA 90 bp | GCTGCTCCGCGGGCCCGGGAGCGAGGGCTTCACCCGCGCAGGACATaGGCCACGCTCCGAGCCAGAGCCGTCCCCGCGGGGTGCACGGAC | + |
|
Preference number: 5 (lower is better) Translates to: AAPRARERGLHPRRT*ATLRARAVPAGCTD Trigger: GTCCGTGCACCCCGCGGGGACGGCTCTGGCTCGGAGCGTGGCCCATGTCCTGCGCGGGTGAAGCCCTCGCTCCCGGGCCCGCGGAGCAGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190255.7 |
||
| CDS CCA 90 bp | GCTGGCCTTTTATCTTTCTCCGTATTGTCCTCATTACATGCTTCGTaGGCCGGGGAGCCCAGCCGGCCGCCGCCCGCCTCGACCGGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: AGLLSFSVLSSLHAS*AGEPSRPPPASTGH Trigger: GTGCCCGGTCGAGGCGGGCGGCGGCCGGCTGGGCTCCCCGGCCCACGAAGCATGTAATGAGGACAATACGGAGAAAGATAAAAGGCCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000125326.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS GCA 90 bp | ACTGGTAGCTGGCCTTTTATCTTTCTCCGTATTGTCCTCATTACATaGTTCGTGGGCCGGGGAGCCCAGCCGGCCGCCGCCCGCCTCGAC | + |
|
Preference number: 5 (lower is better) Translates to: TGSWPFIFLRIVLIT*FVGRGAQPAAARLD Trigger: GTCGAGGCGGGCGGCGGCCGGCTGGGCTCCCCGGCCCACGAAGCATGTAATGAGGACAATACGGAGAAAGATAAAAGGCCAGCTACCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000125326.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CAA 90 bp | GAGTGGGTGAGTGCTATGTGCTGGCAGCAAGGGAACTGGAAGATGGCTCACAAATTGCCTGTTTCCTCCTaGCCGGGTTCCTGTGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: EWVSAMCWQQGNWKMAHKLPVSS*PGSCAD Trigger: ATCAGCACAGGAACCCGGCAAGGAGGAAACAGGCAA...TTTGTGAGCCATCTTCCAGTTCCCTTGCTGCCAGCACATAGCACTCACCCACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| CDS TCA 90 bp | CCATGCAGATTTCTAGACAGTCTGACGATTCACAACAGGCATCCATaGTGCCGCAGTCCATGTCACAGGGGCAGCTACAGTCATCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: PCRFLDSLTIHNRHP*CRSPCHRGSYSHHP Trigger: TGGGTGATGACTGTAGCTGCCCCTGTGACATGGACTGCGGCATCATGGATGCCTGTTGTGAATCGTCAGACTGTCTAGAAATCTGCATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS GCA 90 bp | CTTCGGAGGTGCAGATGCCACACGAAGCTTGTCCCAGGACAATGTTaGAGAGGGTCAGGAATTCACAGAACAAGCATGCCAGGATACAGT | + |
|
Preference number: 5 (lower is better) Translates to: LRRCRCHTKLVPGQC*RGSGIHRTSMPGYS Trigger: ACTGTATCCTGGCATGCTTGTTCTGTGAATTCCTGACCCTCTGCAACATTGTCCTGGGACAAGCTTCGTGTGGCATCTGCACCTCCGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CAA 90 bp | AACAAGAGAGCTGAAAAGCCCAGAGGAGACCAACACGGAGAGTCCCACATCTGTCCGCCATTCTTTATCTaGCCTGTTTCCTCCTTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: NKRAEKPRGDQHGESHICPPFFI*PVSSLP Trigger: CGGCAAGGAGGAAACAGGCAAGATAAAGAATGGCGG...ACAGATGTGGGACTCTCCGTGTTGGTCTCCTCTGGGCTTTTCAGCTCTCTTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CAA 90 bp | CACAGAGCATTGGCAAGTGTTTCTGAGAGCGGAGTAAAAGGATTGGGCAGGGCTCCGCCATTCTTTATCTaGCCTGTTTCCTCCTTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: HRALASVSESGVKGLGRAPPFFI*PVSSLP Trigger: CGGCAAGGAGGAAACAGGCAAGATAAAGAATGGCGG...AGCCCTGCCCAATCCTTTTACTCCGCTCTCAGAAACACTTGCCAATGCTCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| CDS-3UTR CAA 90 bp | AACAAGAGAGCTGAAAAGCCCAGAGGAGACCAACACGGAGAGTCCCACATCTGTGATGCCACACGAAGCTaGTCCCAGGACAATGTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: NKRAEKPRGDQHGESHICDATRS*SQDNVA Trigger: TGCAACATTGTCCTGGGACAAGCTTCGTGTGGCATC...ACAGATGTGGGACTCTCCGTGTTGGTCTCCTCTGGGCTTTTCAGCTCTCTTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CAA 90 bp | AATGTGATCTTCTTCAGAGCACTCTGGCAGAACAAGAGAGCTGAAAAGCCCAGACACCAGCTGAAGGATTaGGCCAAATGGACTGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: NVIFFRALWQNKRAEKPRHQLKD*AKWTGP Trigger: GGGACCAGTCCATTTGGCCAAATCCTTCAGCTGGTG...TCTGGGCTTTTCAGCTCTCTTGTTCTGCCAGAGTGCTCTGAAGAAGATCACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CAA 90 bp | CCACAGTGCCATATCTTCCTCCAGGCCTTCTTCTGTAACCTGTTATTCACTTCTTTGCCTGTTTCCTCCTaGCCGGGTTCCTGTGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: PQCHIFLQAFFCNLLFTSLPVSS*PGSCAD Trigger: ATCAGCACAGGAACCCGGCAAGGAGGAAACAGGCAA...AGAAGTGAATAACAGGTTACAGAAGAAGGCCTGGAGGAAGATATGGCACTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CAA 90 bp | AACCTGGTTCATCCTTTACAGCTCCCATCCTGCTTGCTTCCATTACACTTCCTGGGAATTCCATTCCCATaGCTCATCCTTGTGTGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: NLVHPLQLPSCLLPLHFLGIPFP*LILVWP Trigger: CGGCCACACAAGGATGAGCAATGGGAATGGAATTCC...CAGGAAGTGTAATGGAAGCAAGCAGGATGGGAGCTGTAAAGGATGAACCAGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CAA 90 bp | TTTGAAACCTGGTTCATCCTTTACAGCTCCCATCCTGCTTGCTTCCATTACACTCACCAGCTGAAGGATTaGGCCAAATGGACTGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: FETWFILYSSHPACFHYTHQLKD*AKWTGP Trigger: GGGACCAGTCCATTTGGCCAAATCCTTCAGCTGGTG...AGTGTAATGGAAGCAAGCAGGATGGGAGCTGTAAAGGATGAACCAGGTTTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CAA 90 bp | TTTGAAACCTGGTTCATCCTTTACAGCTCCCATCCTGCTTGCTTCCATTACACTTTGCCTGTTTCCTCCTaGCCGGGTTCCTGTGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: FETWFILYSSHPACFHYTLPVSS*PGSCAD Trigger: ATCAGCACAGGAACCCGGCAAGGAGGAAACAGGCAA...AGTGTAATGGAAGCAAGCAGGATGGGAGCTGTAAAGGATGAACCAGGTTTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CAA 90 bp | AATGTGATCTTCTTCAGAGCACTCTGGCAGAACAAGAGAGCTGAAAAGCCCAGAGGAATTCCATTCCCATaGCTCATCCTTGTGTGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: NVIFFRALWQNKRAEKPRGIPFP*LILVWP Trigger: CGGCCACACAAGGATGAGCAATGGGAATGGAATTCC...TCTGGGCTTTTCAGCTCTCTTGTTCTGCCAGAGTGCTCTGAAGAAGATCACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CAA 90 bp | CCACAGTGCCATATCTTCCTCCAGGCCTTCTTCTGTAACCTGTTATTCACTTCTGGAATTCCATTCCCATaGCTCATCCTTGTGTGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PQCHIFLQAFFCNLLFTSGIPFP*LILVWP Trigger: CGGCCACACAAGGATGAGCAATGGGAATGGAATTCC...AGAAGTGAATAACAGGTTACAGAAGAAGGCCTGGAGGAAGATATGGCACTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CAA 90 bp | CCACAGTGCCATATCTTCCTCCAGGCCTTCTTCTGTAACCTGTTATTCACTTCTGATGCCACACGAAGCTaGTCCCAGGACAATGTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PQCHIFLQAFFCNLLFTSDATRS*SQDNVA Trigger: TGCAACATTGTCCTGGGACAAGCTTCGTGTGGCATC...AGAAGTGAATAACAGGTTACAGAAGAAGGCCTGGAGGAAGATATGGCACTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CAA 90 bp | TTTGAAACCTGGTTCATCCTTTACAGCTCCCATCCTGCTTGCTTCCATTACACTCCGCCATTCTTTATCTaGCCTGTTTCCTCCTTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: FETWFILYSSHPACFHYTPPFFI*PVSSLP Trigger: CGGCAAGGAGGAAACAGGCAAGATAAAGAATGGCGG...AGTGTAATGGAAGCAAGCAGGATGGGAGCTGTAAAGGATGAACCAGGTTTCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CAA 90 bp | CAGCTCTGCTTACCCACTTTGACACTATCCTCTCTTTTGGTTGCAACTTTTACCGGAATTCCATTCCCATaGCTCATCCTTGTGTGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: QLCLPTLTLSSLLVATFTGIPFP*LILVWP Trigger: CGGCCACACAAGGATGAGCAATGGGAATGGAATTCC...GGTAAAAGTTGCAACCAAAAGAGAGGATAGTGTCAAAGTGGGTAAGCAGAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| CDS-3UTR CAA 90 bp | CCACATACATCCGGCGAAAGGAAGAATTTCAGAGCTTACTTAGAAGGAATGGGTGATGCCACACGAAGCTaGTCCCAGGACAATGTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PHTSGERKNFRAYLEGMGDATRS*SQDNVA Trigger: TGCAACATTGTCCTGGGACAAGCTTCGTGTGGCATC...ACCCATTCCTTCTAAGTAAGCTCTGAAATTCTTCCTTTCGCCGGATGTATGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CAA 90 bp | TGGGTATGTGGAAATACTAAGGTTGCCATTATATTTGACGCAGCGAATCAAAGCCACCAGCTGAAGGATTaGGCCAAATGGACTGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: WVCGNTKVAIIFDAANQSHQLKD*AKWTGP Trigger: GGGACCAGTCCATTTGGCCAAATCCTTCAGCTGGTG...GCTTTGATTCGCTGCGTCAAATATAATGGCAACCTTAGTATTTCCACATACCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CAA 90 bp | AATACGACACAACGAACCATCCAAAGAGCATCTGCAGGTTTCATCATATTGAGTCACCAGCTGAAGGATTaGGCCAAATGGACTGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: NTTQRTIQRASAGFIILSHQLKD*AKWTGP Trigger: GGGACCAGTCCATTTGGCCAAATCCTTCAGCTGGTG...ACTCAATATGATGAAACCTGCAGATGCTCTTTGGATGGTTCGTTGTGTCGTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| CDS-3UTR CAA 90 bp | CTTCTGTTTCAAAGACGAGGAGGAAGGCAGCTGTACATTAGCATCGTATTTAAATTGCCTGTTTCCTCCTaGCCGGGTTCCTGTGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LLFQRRGGRQLYISIVFKLPVSS*PGSCAD Trigger: ATCAGCACAGGAACCCGGCAAGGAGGAAACAGGCAA...TTTAAATACGATGCTAATGTACAGCTGCCTTCCTCCTCGTCTTTGAAACAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CAA 90 bp | TGGCTTAAATACATACTGAGCAATGTTGTGTTTAGAGCAAAGAGCTGCTCAGAACACCAGCTGAAGGATTaGGCCAAATGGACTGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: WLKYILSNVVFRAKSCSEHQLKD*AKWTGP Trigger: GGGACCAGTCCATTTGGCCAAATCCTTCAGCTGGTG...TTCTGAGCAGCTCTTTGCTCTAAACACAACATTGCTCAGTATGTATTTAAGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CAA 90 bp | AAGAGCTGCTCAGAATGGTTAGCGAAAACAGACATGTCAAGAGAAAGAAGACATCCGCCATTCTTTATCTaGCCTGTTTCCTCCTTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: KSCSEWLAKTDMSRERRHPPFFI*PVSSLP Trigger: CGGCAAGGAGGAAACAGGCAAGATAAAGAATGGCGG...ATGTCTTCTTTCTCTTGACATGTCTGTTTTCGCTAACCATTCTGAGCAGCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CAA 90 bp | TGGGTATGTGGAAATACTAAGGTTGCCATTATATTTGACGCAGCGAATCAAAGCGGAATTCCATTCCCATaGCTCATCCTTGTGTGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: WVCGNTKVAIIFDAANQSGIPFP*LILVWP Trigger: CGGCCACACAAGGATGAGCAATGGGAATGGAATTCC...GCTTTGATTCGCTGCGTCAAATATAATGGCAACCTTAGTATTTCCACATACCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CAA 90 bp | CCACATACATCCGGCGAAAGGAAGAATTTCAGAGCTTACTTAGAAGGAATGGGTGTGAGGAGGCTGCTTTaGGGGAAAAGACAGCATTTA | + |
|
Preference number: 5 (lower is better) Translates to: PHTSGERKNFRAYLEGMGVRRLL*GKRQHL Trigger: TAAATGCTGTCTTTTCCCCAAAAGCAGCCTCCTCAC...ACCCATTCCTTCTAAGTAAGCTCTGAAATTCTTCCTTTCGCCGGATGTATGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CAA 90 bp | AAGAGCTGCTCAGAATGGTTAGCGAAAACAGACATGTCAAGAGAAAGAAGACATGATGCCACACGAAGCTaGTCCCAGGACAATGTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: KSCSEWLAKTDMSRERRHDATRS*SQDNVA Trigger: TGCAACATTGTCCTGGGACAAGCTTCGTGTGGCATC...ATGTCTTCTTTCTCTTGACATGTCTGTTTTCGCTAACCATTCTGAGCAGCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CAA 90 bp | CATATTAAACCACATACATCCGGCGAAAGGAAGAATTTCAGAGCTTACTTAGAATTGCCTGTTTCCTCCTaGCCGGGTTCCTGTGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: HIKPHTSGERKNFRAYLELPVSS*PGSCAD Trigger: ATCAGCACAGGAACCCGGCAAGGAGGAAACAGGCAA...TTCTAAGTAAGCTCTGAAATTCTTCCTTTCGCCGGATGTATGTGGTTTAATATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CAA 90 bp | TGGCTTAAATACATACTGAGCAATGTTGTGTTTAGAGCAAAGAGCTGCTCAGAACCGCCATTCTTTATCTaGCCTGTTTCCTCCTTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: WLKYILSNVVFRAKSCSEPPFFI*PVSSLP Trigger: CGGCAAGGAGGAAACAGGCAAGATAAAGAATGGCGG...TTCTGAGCAGCTCTTTGCTCTAAACACAACATTGCTCAGTATGTATTTAAGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CAA 90 bp | TTCAGAGGCGACACCACAGTCAACAGGTTCAAGGTAAAACTGAGCTTCAAGACATTCTTACTGATGTCATaGTTTACAGACAAGCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: FRGDTTVNRFKVKLSFKTFLLMS*FTDKLD Trigger: GTCCAGCTTGTCTGTAAACAATGACATCAGTAAGAA...TGTCTTGAAGCTCAGTTTTACCTTGAACCTGTTGACTGTGGTGTCGCCTCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| CDS-3UTR CAA 90 bp | CTTCTGTTTCAAAGACGAGGAGGAAGGCAGCTGTACATTAGCATCGTATTTAAAGTGAGGAGGCTGCTTTaGGGGAAAAGACAGCATTTA | + |
|
Preference number: 5 (lower is better) Translates to: LLFQRRGGRQLYISIVFKVRRLL*GKRQHL Trigger: TAAATGCTGTCTTTTCCCCAAAAGCAGCCTCCTCAC...TTTAAATACGATGCTAATGTACAGCTGCCTTCCTCCTCGTCTTTGAAACAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CAA 90 bp | TTCCTCCAGGCCTTCTTCTGTAACCTGTTATTCACTTCTGTATGTTCCTATGGCTTATCTTTCTCCGTATaGTCCTCATTACATGCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: FLQAFFCNLLFTSVCSYGLSFSV*SSLHAS Trigger: CGAAGCATGTAATGAGGACAATACGGAGAAAGATAA...GCCATAGGAACATACAGAAGTGAATAACAGGTTACAGAAGAAGGCCTGGAGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CAA 90 bp | TTTGAAACCTGGTTCATCCTTTACAGCTCCCATCCTGCTTGCTTCCATTACACTTTATCTTTCTCCGTATaGTCCTCATTACATGCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: FETWFILYSSHPACFHYTLSFSV*SSLHAS Trigger: CGAAGCATGTAATGAGGACAATACGGAGAAAGATAA...AGTGTAATGGAAGCAAGCAGGATGGGAGCTGTAAAGGATGAACCAGGTTTCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CAA 90 bp | TTTGAAACCTGGTTCATCCTTTACAGCTCCCATCCTGCTTGCTTCCATTACACTTTCTTACTGATGTCATaGTTTACAGACAAGCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: FETWFILYSSHPACFHYTFLLMS*FTDKLD Trigger: GTCCAGCTTGTCTGTAAACAATGACATCAGTAAGAA...AGTGTAATGGAAGCAAGCAGGATGGGAGCTGTAAAGGATGAACCAGGTTTCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CAA 90 bp | ACAGTGCAAATACTGAGTTGTTTCATGGGAGTCTTACCATGCGCCTTTCTTTCCTTCTTACTGATGTCATaGTTTACAGACAAGCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: TVQILSCFMGVLPCAFLSFLLMS*FTDKLD Trigger: GTCCAGCTTGTCTGTAAACAATGACATCAGTAAGAA...GGAAAGAAAGGCGCATGGTAAGACTCCCATGAAACAACTCAGTATTTGCACTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CAA 90 bp | CAGGAGGAAGAACAGAAGGTTATACACAGGCTGGGAATAATTTACAACCTTAATGTGAGGAGGCTGCTTTaGGGGAAAAGACAGCATTTA | + |
|
Preference number: 5 (lower is better) Translates to: QEEEQKVIHRLGIIYNLNVRRLL*GKRQHL Trigger: TAAATGCTGTCTTTTCCCCAAAAGCAGCCTCCTCAC...ATTAAGGTTGTAAATTATTCCCAGCCTGTGTATAACCTTCTGTTCTTCCTCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125326.8 |
||
| CDS-3UTR CAA 90 bp | AGCTGCTCAGAATGGTTAGCGAAAACAGACATGTCAAGAGAAAGAAGACATTTAGTGAGGAGGCTGCTTTaGGGGAAAAGACAGCATTTA | + |
|
Preference number: 5 (lower is better) Translates to: SCSEWLAKTDMSRERRHLVRRLL*GKRQHL Trigger: TAAATGCTGTCTTTTCCCCAAAAGCAGCCTCCTCAC...TAAATGTCTTCTTTCTCTTGACATGTCTGTTTTCGCTAACCATTCTGAGCAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS TCA 90 bp | GCCTTTTATCTTTCTCCGTATTGTCCTCATTACATGCTTCTGAAATaGTGTCCAATGAGTATAAAGACACTCCAGCCACATCTCCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: AFYLSPYCPHYMLLK*CPMSIKTLQPHLQD Trigger: ATCCTGGAGATGTGGCTGGAGTGTCTTTATACTCATTGGACATCATTTCAGAAGCATGTAATGAGGACAATACGGAGAAAGATAAAAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128849.3 |
||
| CDS-3UTR CAA 90 bp | CATATTAAACCACATACATCCGGCGAAAGGAAGAATTTCAGAGCTTACTTAGAAGTGAGGAGGCTGCTTTaGGGGAAAAGACAGCATTTA | + |
|
Preference number: 5 (lower is better) Translates to: HIKPHTSGERKNFRAYLEVRRLL*GKRQHL Trigger: TAAATGCTGTCTTTTCCCCAAAAGCAGCCTCCTCAC...TTCTAAGTAAGCTCTGAAATTCTTCCTTTCGCCGGATGTATGTGGTTTAATATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CAA 90 bp | ATAGTATTTAGCCTAACTTCAAGTTGGTTAAGGGCAGATGAGGTGCCATTGAAGGTATGTGAATCATCTTaGTTCAGATCATGTGGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: IVFSLTSSWLRADEVPLKVCESS*FRSCGR Trigger: ACGCCCACATGATCTGAACAAAGATGATTCACATAC...CTTCAATGGCACCTCATCTGCCCTTAACCAACTTGAAGTTAGGCTAAATACTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| CDS-3UTR CAA 90 bp | CTTCTGTTTCAAAGACGAGGAGGAAGGCAGCTGTACATTAGCATCGTATTTAAATTATCTTTCTCCGTATaGTCCTCATTACATGCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: LLFQRRGGRQLYISIVFKLSFSV*SSLHAS Trigger: CGAAGCATGTAATGAGGACAATACGGAGAAAGATAA...TTTAAATACGATGCTAATGTACAGCTGCCTTCCTCCTCGTCTTTGAAACAGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CAA 90 bp | TGGGTATGTGGAAATACTAAGGTTGCCATTATATTTGACGCAGCGAATCAAAGCTTATCTTTCTCCGTATaGTCCTCATTACATGCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: WVCGNTKVAIIFDAANQSLSFSV*SSLHAS Trigger: CGAAGCATGTAATGAGGACAATACGGAGAAAGATAA...GCTTTGATTCGCTGCGTCAAATATAATGGCAACCTTAGTATTTCCACATACCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101663.10 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS-3UTR CAA 90 bp | TGGCTTAAATACATACTGAGCAATGTTGTGTTTAGAGCAAAGAGCTGCTCAGAATTCTTACTGATGTCATaGTTTACAGACAAGCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: WLKYILSNVVFRAKSCSEFLLMS*FTDKLD Trigger: GTCCAGCTTGTCTGTAAACAATGACATCAGTAAGAA...TTCTGAGCAGCTCTTTGCTCTAAACACAACATTGCTCAGTATGTATTTAAGCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS CCA 72 bp | CGGGCCCGGGAGCGAGGGCTTCACCCGCGCAGGACATaGGCCACGCTCCGAGCCAGAGCCGTCCCCGCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RARERGLHPRRT*ATLRARAVPAG Trigger: CCCCGCGGGGACGGCTCTGGCTCGGAGCGTGGCCCATGTCCTGCGCGGGTGAAGCCCTCGCTCCCGGGCCCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190255.7 |
||
| CDS TCA 72 bp | AGGCTCTGGCCGCGGCCCCATCACGCCCTGGCAGCCTaGCCACGTCCCTCCGGCCCCGGGAGTGGCAGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: RLWPRPHHALAA*PRPSGPGSGSD Trigger: GTCGCTGCCACTCCCGGGGCCGGAGGGACGTGGTCAGGCTGCCAGGGCGTGATGGGGCCGCGGCCAGAGCCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190255.7 |
||
| CDS CCA 72 bp | CCTGGCAGCCTGACCACGTCCCTCCGGCCCCGGGAGTaGCAGCGACAGTGGCAGCCGCCCGCGCTGACTCCG | + |
|
Preference number: 6 (lower is better) Translates to: PGSLTTSLRPRE*QRQWQPPALTP Trigger: CGGAGTCAGCGCGGGCGGCTGCCACTGTCGCTGCCACTCCCGGGGCCGGAGGGACGTGGTCAGGCTGCCAGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190255.7 |
||
| CDS CAA 72 bp | GCAGCAGGCTTCGGAGGTGCAGATGCCACACGAAGCTaGTCCCAGGACAATGTTGCAGAGGGTCAGGAATTC | + |
|
Preference number: 6 (lower is better) Translates to: AAGFGGADATRS*SQDNVAEGQEF Trigger: GAATTCCTGACCCTCTGCAACATTGTCCTGGGACAAGCTTCGTGTGGCATCTGCACCTCCGAAGCCTGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS CAA 72 bp | GGACAGAGCCGAAAGGCACATGTATGTGAATCATCTTaGTTCAGATCATGTGGGCGTGAGTCGTGGGCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: GQSRKAHVCESS*FRSCGRESWAG Trigger: CCCGGCCCACGACTCACGCCCACATGATCTGAACAAAGATGATTCACATACATGTGCCTTTCGGCTCTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| CDS CAA 90 bp | ACAGCAACAGCAGCAGGCTTCGGAGGTGCAGATGCCACACGAAGCTaGTCCCAGGACAATGTTGCAGAGGGTCAGGAATTCACAGAACAA | + |
|
Preference number: 6 (lower is better) Translates to: TATAAGFGGADATRS*SQDNVAEGQEFTEQ Trigger: TTGTTCTGTGAATTCCTGACCCTCTGCAACATTGTCCTGGGACAAGCTTCGTGTGGCATCTGCACCTCCGAAGCCTGCTGCTGTTGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS CAA 90 bp | ACTACAAAAGGACAGAGCCGAAAGGCACATGTATGTGAATCATCTTaGTTCAGATCATGTGGGCGTGAGTCGTGGGCCGGGGAGCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TTKGQSRKAHVCESS*FRSCGRESWAGEPS Trigger: GCTGGGCTCCCCGGCCCACGACTCACGCCCACATGATCTGAACAAAGATGATTCACATACATGTGCCTTTCGGCTCTGTCCTTTTGTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| CDS TCA 72 bp | TTTCTAGACAGTCTGACGATTCACAACAGGCATCCATaGTGCCGCAGTCCATGTCACAGGGGCAGCTACAGT | + |
|
Preference number: 6 (lower is better) Translates to: FLDSLTIHNRHP*CRSPCHRGSYS Trigger: ACTGTAGCTGCCCCTGTGACATGGACTGCGGCATCATGGATGCCTGTTGTGAATCGTCAGACTGTCTAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS CCA 72 bp | CACCATCCCCCAAGAACTGGCAAGAGAGCCAGACGTTaGTCCTTCAGGAGAAAGGAATGTGCTTTCAAATGT | + |
|
Preference number: 6 (lower is better) Translates to: HHPPRTGKRARR*SFRRKECAFKC Trigger: ACATTTGAAAGCACATTCCTTTCTCCTGAAGGACCAACGTCTGGCTCTCTTGCCAGTTCTTGGGGGATGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| CDS CAA 72 bp | TCACCATCCCCCAAGAACTGGCAAGAGAGCCAGACGTaGGTCCTTCAGGAGAAAGGAATGTGCTTTCAAATG | + |
|
Preference number: 6 (lower is better) Translates to: SPSPKNWQESQT*VLQEKGMCFQM Trigger: CATTTGAAAGCACATTCCTTTCTCCTGAAGGACCAACGTCTGGCTCTCTTGCCAGTTCTTGGGGGATGGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| CDS CAA 90 bp | ATCCAATACTCACCATCCCCCAAGAACTGGCAAGAGAGCCAGACGTaGGTCCTTCAGGAGAAAGGAATGTGCTTTCAAATGTCAATGCTA | + |
|
Preference number: 6 (lower is better) Translates to: IQYSPSPKNWQESQT*VLQEKGMCFQMSML Trigger: TAGCATTGACATTTGAAAGCACATTCCTTTCTCCTGAAGGACCAACGTCTGGCTCTCTTGCCAGTTCTTGGGGGATGGTGAGTATTGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| CDS CAA 72 bp | AGTGGACACAGCAGTCTTCGGGTGAGGAGGCTGCTTTaGGGGAAAAGACAGCATTTACTTTACTCTTCTTAC | + |
|
Preference number: 6 (lower is better) Translates to: SGHSSLRVRRLL*GKRQHLLYSSY Trigger: GTAAGAAGAGTAAAGTAAATGCTGTCTTTTCCCCAAAAGCAGCCTCCTCACCCGAAGACTGCTGTGTCCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101663.10 ENSMUST00000120512.8 ENSMUST00000189359.7 ENSMUST00000190255.7 |
||
| CDS TCA 72 bp | TGTGCTAGCATAAAACCTCAATTCCAGCTTCATTCCTaGGACTACAAAAGGACAGAGCCGAAAGGCACATGT | + |
|
Preference number: 6 (lower is better) Translates to: CASIKPQFQLHS*DYKRTEPKGTC Trigger: ACATGTGCCTTTCGGCTCTGTCCTTTTGTAGTCTCAGGAATGAAGCTGGAATTGAGGTTTTATGCTAGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140516.8 |
||
| CDS CAA 72 bp | TGGCCACTGGTAGCTGGCCTTTTATCTTTCTCCGTATaGTCCTCATTACATGCTTCTGAAATGATGTCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: WPLVAGLLSFSV*SSLHASEMMSN Trigger: ATTGGACATCATTTCAGAAGCATGTAATGAGGACAATACGGAGAAAGATAAAAGGCCAGCTACCAGTGGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128849.3 |
||
| CDS CAA 90 bp | CACCTGGTATGGCCACTGGTAGCTGGCCTTTTATCTTTCTCCGTATaGTCCTCATTACATGCTTCTGAAATGATGTCCAATGAGTATAAA | + |
|
Preference number: 6 (lower is better) Translates to: HLVWPLVAGLLSFSV*SSLHASEMMSNEYK Trigger: TTTATACTCATTGGACATCATTTCAGAAGCATGTAATGAGGACAATACGGAGAAAGATAAAAGGCCAGCTACCAGTGGCCATACCAGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128849.3 |
||