Pregenerated sensors for MDFI (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032717Ensembl transcript IDs: ENSMUST00000035375.14, ENSMUST00000066368.13, ENSMUST00000113280.8, ENSMUST00000129360.2, ENSMUST00000131971.2, ENSMUST00000132125.8, ENSMUST00000152455.8
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GATGCCGTGTTCCTGGTCACCCGTGGAGGGGACCAGGCTACGCGTCTGAAAGCAGACCTGTTCGGTGGCTaGGGTGGCCCCTCTGAGCGT | + |
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Preference number: 2 (lower is better) Translates to: DAVFLVTRGGDQATRLKADLFGG*GGPSER Trigger: ACGCTCAGAGGGGCCACCTCAGCCACCGAACAGGTC...TGCTTTCAGACGCGTAGCCTGGTCCCCTCCACGGGTGACCAGGAACACGGCATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
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| 3UTR-3UTR CCA 90 bp | ATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGTCTTTTCCATATTGCGCCGTGGGGGCCTGGCAGTaGGCGGGGCAGAGGCCTTTT | + |
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Preference number: 2 (lower is better) Translates to: MNRTDPPSTPFQSFPYCAVGAWQ*AGQRPF Trigger: AAAAGGCCTCTGCCCCGCCCACTGCCAGGCCCCCAC...GGCGCAATATGGAAAAGACTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGTAATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGTCTTTTCCATATGTGGGGGCCTGGCAGTaGGCGGGGCAGAGGCCTTTT | + |
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Preference number: 2 (lower is better) Translates to: TVMNRTDPPSTPFQSFPYVGAWQ*AGQRPF Trigger: AAAAGGCCTCTGCCCCGCCCACTGCCAGGCCCCCAC...ATATGGAAAAGACTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCATTACTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGTAATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGTCTTTTCCATATGACCTGTTCGGTGGCTaGGGTGGCCCCTCTGAGCGT | + |
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Preference number: 2 (lower is better) Translates to: TVMNRTDPPSTPFQSFPYDLFGG*GGPSER Trigger: ACGCTCAGAGGGGCCACCTCAGCCACCGAACAGGTC...ATATGGAAAAGACTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCATTACTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
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| 3UTR-3UTR TCA 90 bp | TTATTTACAGTAATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGTCTTTTGACCTGTTCGGTGGCTaGGGTGGCCCCTCTGAGCGT | + |
|
Preference number: 2 (lower is better) Translates to: LFTVMNRTDPPSTPFQSFDLFGG*GGPSER Trigger: ACGCTCAGAGGGGCCACCTCAGCCACCGAACAGGTC...AAAAGACTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCATTACTGTAAATAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
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| 3UTR-3UTR CCA 90 bp | ATGTCTTTATTTACAGTAATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGGAAACCCCATCCTCTTaGGTCACTCTATGGGTTAGG | + |
|
Preference number: 2 (lower is better) Translates to: MSLFTVMNRTDPPSTPFQETPSS*VTLWVR Trigger: CCTAACCCATAGAGTGACCCAAGAGGATGGGGTTTC...CTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCATTACTGTAAATAAAGACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
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| 3UTR GCA 72 bp | TGGCAGCTAACTGGTTCTGTCCTACCAGGCTCTAGATaGCGTGTTCCTGGTCACCCGTGGAGGGGACCAGGC | + |
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Preference number: 3 (lower is better) Translates to: WQLTGSVLPGSR*RVPGHPWRGPG Trigger: GCCTGGTCCCCTCCACGGGTGACCAGGAACACGGCATCTAGAGCCTGGTAGGACAGAACCAGTTAGCTGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
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| 3UTR TCA 72 bp | CCACTCCTGGCCCCTCCCCTACCGTTCACAGTGTTCTaGGTTATGGCAGCTAACTGGTTCTGTCCTACCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PLLAPPLPFTVF*VMAANWFCPTR Trigger: CCTGGTAGGACAGAACCAGTTAGCTGCCATAACTCAGAACACTGTGAACGGTAGGGGAGGGGCCAGGAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
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| CDS-3UTR TCA 90 bp | CCCACCCACCCCCACCCGAAACCCCATCCTCTTGGGTCACTCTATGGGTTAGGCGCGCTGGGGACTCCATaGGGCGCGTCGCAGCGAGAA | + |
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Preference number: 4 (lower is better) Translates to: PTHPHPKPHPLGSLYGLGALGTP*GASQRE Trigger: TTCTCGCTGCGACGCGCCTCATGGAGTCCCCAGCGC...GCCTAACCCATAGAGTGACCCAAGAGGATGGGGTTTCGGGTGGGGGTGGGTGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
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| CDS-3UTR GCA 90 bp | TCTAGATGCCGTGTTCCTGGTCACCCGTGGAGGGGACCAGGCTACGCGTCTGAAATGGGGCATGGAGGGTaGCGCCTCCTCCGGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SRCRVPGHPWRGPGYASEMGHGG*RLLREA Trigger: GGCTTCCCGGAGGAGGCGGCACCCTCCATGCCCCAT...TTCAGACGCGTAGCCTGGTCCCCTCCACGGGTGACCAGGAACACGGCATCTAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 |
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| CDS-3UTR CCA 90 bp | GATGCCGTGTTCCTGGTCACCCGTGGAGGGGACCAGGCTACGCGTCTGAAAGCACAGGGAGGAGGGACATaGTCTGGGCTGGGTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DAVFLVTRGGDQATRLKAQGGGT*SGLGPG Trigger: CCCTGGACCCAGCCCAGACCATGTCCCTCCTCCCTG...TGCTTTCAGACGCGTAGCCTGGTCCCCTCCACGGGTGACCAGGAACACGGCATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 |
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| CDS-3UTR GCA 90 bp | CCCACCCACCCCCACCCGAAACCCCATCCTCTTGGGTCACTCTATGGGTTAGGCAGGAGTCCTCAGAGCTaGAGGAGCCACAGGTGGCGC | + |
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Preference number: 4 (lower is better) Translates to: PTHPHPKPHPLGSLYGLGRSPQS*RSHRWR Trigger: GCGCCACCTGTGGCTCCTGCAGCTCTGAGGACTCCT...GCCTAACCCATAGAGTGACCCAAGAGGATGGGGTTTCGGGTGGGGGTGGGTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
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| CDS-3UTR CCA 90 bp | TCTAGATGCCGTGTTCCTGGTCACCCGTGGAGGGGACCAGGCTACGCGTCTGAAACTTCCGGTGGGCCTTaGACCCGCCCAGAGCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: SRCRVPGHPWRGPGYASETSGGP*TRPEHR Trigger: ACGGTGCTCTGGGCGGGTCCAAGGCCCACCGGAAGT...TTCAGACGCGTAGCCTGGTCCCCTCCACGGGTGACCAGGAACACGGCATCTAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
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| CDS-3UTR CCA 90 bp | GATGCCGTGTTCCTGGTCACCCGTGGAGGGGACCAGGCTACGCGTCTGAAAGCAGTCTGCAACTTCCGGTaGGCCTTGGACCCGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: DAVFLVTRGGDQATRLKAVCNFR*ALDPPR Trigger: TCTGGGCGGGTCCAAGGCCCACCGGAAGTTGCAGAC...TGCTTTCAGACGCGTAGCCTGGTCCCCTCCACGGGTGACCAGGAACACGGCATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
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| CDS-3UTR TCA 90 bp | GGTTCTGTCCTACCAGGCTCTAGATGCCGTGTTCCTGGTCACCCGTGGAGGGGACCTTGGGGGTTCCCTTaGGGCTGGCACGTCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSVLPGSRCRVPGHPWRGPWGFP*GWHVTA Trigger: AGCTGTGACGTGCCAGCCTCAAGGGAACCCCCAAGG...TCCCCTCCACGGGTGACCAGGAACACGGCATCTAGAGCCTGGTAGGACAGAACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 |
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| CDS-3UTR CCA 90 bp | GGTTCTGTCCTACCAGGCTCTAGATGCCGTGTTCCTGGTCACCCGTGGAGGGGAGTCTGCAACTTCCGGTaGGCCTTGGACCCGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSVLPGSRCRVPGHPWRGVCNFR*ALDPPR Trigger: TCTGGGCGGGTCCAAGGCCCACCGGAAGTTGCAGAC...TCCCCTCCACGGGTGACCAGGAACACGGCATCTAGAGCCTGGTAGGACAGAACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
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| CDS-3UTR GCA 90 bp | CCCACCCACCCCCACCCGAAACCCCATCCTCTTGGGTCACTCTATGGGTTAGGCAGGGTGAGTGGATCTTaGTACCTCCAGCCCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PTHPHPKPHPLGSLYGLGRVSGS*YLQPRE Trigger: CTCCCTGGGCTGGAGGTAGCAAGATCCACTCACCCT...GCCTAACCCATAGAGTGACCCAAGAGGATGGGGTTTCGGGTGGGGGTGGGTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 |
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| CDS-3UTR GCA 90 bp | GATGCCGTGTTCCTGGTCACCCGTGGAGGGGACCAGGCTACGCGTCTGAAAGCACTGCCCAGAGATGGATaGGTCTGCAACTTCCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DAVFLVTRGGDQATRLKALPRDG*VCNFRW Trigger: CCACCGGAAGTTGCAGACGCATCCATCTCTGGGCAG...TGCTTTCAGACGCGTAGCCTGGTCCCCTCCACGGGTGACCAGGAACACGGCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
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| CDS-3UTR CCA 90 bp | TCTAGATGCCGTGTTCCTGGTCACCCGTGGAGGGGACCAGGCTACGCGTCTGAATGCAGGAGCCACAGGTaGCGCAGTCCAGGAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: SRCRVPGHPWRGPGYASECRSHR*RSPGGC Trigger: ACATCCTCCTGGACTGCGCCACCTGTGGCTCCTGCA...TTCAGACGCGTAGCCTGGTCCCCTCCACGGGTGACCAGGAACACGGCATCTAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
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| CDS-3UTR CCA 90 bp | CCCTCCCACTCCTGGCCCCTCCCCTACCGTTCACAGTGTTCTGAGTTATGGCAGTGCAGGAGCCACAGGTaGCGCAGTCCAGGAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: PSHSWPLPYRSQCSELWQCRSHR*RSPGGC Trigger: ACATCCTCCTGGACTGCGCCACCTGTGGCTCCTGCA...CTGCCATAACTCAGAACACTGTGAACGGTAGGGGAGGGGCCAGGAGTGGGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
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| CDS-3UTR GCA 90 bp | CCCACCCACCCCCACCCGAAACCCCATCCTCTTGGGTCACTCTATGGGTTAGGCAGAGATGGATGCGTCTaGAACTTCCGGTGGGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: PTHPHPKPHPLGSLYGLGRDGCV*NFRWAL Trigger: CAAGGCCCACCGGAAGTTGCAGACGCATCCATCTCT...GCCTAACCCATAGAGTGACCCAAGAGGATGGGGTTTCGGGTGGGGGTGGGTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
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| CDS-3UTR GCA 90 bp | GGTTCTGTCCTACCAGGCTCTAGATGCCGTGTTCCTGGTCACCCGTGGAGGGGACTGCCCAGAGATGGATaGGTCTGCAACTTCCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSVLPGSRCRVPGHPWRGLPRDG*VCNFRW Trigger: CCACCGGAAGTTGCAGACGCATCCATCTCTGGGCAG...TCCCCTCCACGGGTGACCAGGAACACGGCATCTAGAGCCTGGTAGGACAGAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
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| CDS-3UTR CCA 90 bp | CCCACCCACCCCCACCCGAAACCCCATCCTCTTGGGTCACTCTATGGGTTAGGCTCTGAGAGGTGGTCGTaGCTGGAGCCATTTGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: PTHPHPKPHPLGSLYGLGSERWS*LEPFGS Trigger: ACTGCCAAATGGCTCCAGCCACGACCACCTCTCAGA...GCCTAACCCATAGAGTGACCCAAGAGGATGGGGTTTCGGGTGGGGGTGGGTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
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| CDS-3UTR CCA 90 bp | CCCTCCCACTCCTGGCCCCTCCCCTACCGTTCACAGTGTTCTGAGTTATGGCAGCTGGCTGCCCAGAGATaGATGCGTCTGCAACTTCCG | + |
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Preference number: 4 (lower is better) Translates to: PSHSWPLPYRSQCSELWQLAAQR*MRLQLP Trigger: CGGAAGTTGCAGACGCATCCATCTCTGGGCAGCCAG...CTGCCATAACTCAGAACACTGTGAACGGTAGGGGAGGGGCCAGGAGTGGGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
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| CDS-3UTR CCA 90 bp | TCTAGATGCCGTGTTCCTGGTCACCCGTGGAGGGGACCAGGCTACGCGTCTGAACTGGCTGCCCAGAGATaGATGCGTCTGCAACTTCCG | + |
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Preference number: 4 (lower is better) Translates to: SRCRVPGHPWRGPGYASELAAQR*MRLQLP Trigger: CGGAAGTTGCAGACGCATCCATCTCTGGGCAGCCAG...TTCAGACGCGTAGCCTGGTCCCCTCCACGGGTGACCAGGAACACGGCATCTAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
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| CDS-3UTR CCA 90 bp | GATGCCGTGTTCCTGGTCACCCGTGGAGGGGACCAGGCTACGCGTCTGAAAGCACTTTTCCTTCCAGCCTaGCTGCCCAGAGATGGATGC | + |
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Preference number: 4 (lower is better) Translates to: DAVFLVTRGGDQATRLKALFLPA*LPRDGC Trigger: GCATCCATCTCTGGGCAGCCAGGCTGGAAGGAAAAG...TGCTTTCAGACGCGTAGCCTGGTCCCCTCCACGGGTGACCAGGAACACGGCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
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| CDS-3UTR TCA 90 bp | ATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGTCTTTTCCATATTGCGCCGCGCTGGGGACTCCATaGGGCGCGTCGCAGCGAGAA | + |
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Preference number: 4 (lower is better) Translates to: MNRTDPPSTPFQSFPYCAALGTP*GASQRE Trigger: TTCTCGCTGCGACGCGCCTCATGGAGTCCCCAGCGC...GGCGCAATATGGAAAAGACTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
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| CDS-3UTR GCA 90 bp | CCCTCCCACTCCTGGCCCCTCCCCTACCGTTCACAGTGTTCTGAGTTATGGCAGTATCTCCAAGCAGTCTaGGGACTCGCAGCAGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: PSHSWPLPYRSQCSELWQYLQAV*GLAAGI Trigger: GATGCCTGCTGCGAGTCCGCAGACTGCTTGGAGATA...CTGCCATAACTCAGAACACTGTGAACGGTAGGGGAGGGGCCAGGAGTGGGAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
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| CDS-3UTR CCA 90 bp | GGTTCTGTCCTACCAGGCTCTAGATGCCGTGTTCCTGGTCACCCGTGGAGGGGATCTGAGAGGTGGTCGTaGCTGGAGCCATTTGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: GSVLPGSRCRVPGHPWRGSERWS*LEPFGS Trigger: ACTGCCAAATGGCTCCAGCCACGACCACCTCTCAGA...TCCCCTCCACGGGTGACCAGGAACACGGCATCTAGAGCCTGGTAGGACAGAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
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| CDS-3UTR CCA 90 bp | TCTAGATGCCGTGTTCCTGGTCACCCGTGGAGGGGACCAGGCTACGCGTCTGAACTTTTCCTTCCAGCCTaGCTGCCCAGAGATGGATGC | + |
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Preference number: 4 (lower is better) Translates to: SRCRVPGHPWRGPGYASELFLPA*LPRDGC Trigger: GCATCCATCTCTGGGCAGCCAGGCTGGAAGGAAAAG...TTCAGACGCGTAGCCTGGTCCCCTCCACGGGTGACCAGGAACACGGCATCTAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
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| CDS-3UTR CCA 90 bp | TCTAGATGCCGTGTTCCTGGTCACCCGTGGAGGGGACCAGGCTACGCGTCTGAACAATCTTCCTGTGCCTaGAGAGGGACCTGTGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: SRCRVPGHPWRGPGYASEQSSCA*RGTCEA Trigger: AGCCTCACAGGTCCCTCTCCAGGCACAGGAAGATTG...TTCAGACGCGTAGCCTGGTCCCCTCCACGGGTGACCAGGAACACGGCATCTAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
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| CDS-3UTR CCA 90 bp | ATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGTCTTTTCCATATTGCGCCCAGGGAGGAGGGACATaGTCTGGGCTGGGTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: MNRTDPPSTPFQSFPYCAQGGGT*SGLGPG Trigger: CCCTGGACCCAGCCCAGACCATGTCCCTCCTCCCTG...GGCGCAATATGGAAAAGACTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 |
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| CDS-3UTR CCA 90 bp | ATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGTCTTTTCCATATTGCGCCCACTGTCATGGGGCATaGAGGGTGCCGCCTCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: MNRTDPPSTPFQSFPYCAHCHGA*RVPPPP Trigger: CGGAGGAGGCGGCACCCTCCATGCCCCATGACAGTG...GGCGCAATATGGAAAAGACTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 |
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| CDS-3UTR CCA 90 bp | GGTTCTGTCCTACCAGGCTCTAGATGCCGTGTTCCTGGTCACCCGTGGAGGGGAACGTCACAGCTTCTGTaGGGACATCGAGGTCAATGC | + |
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Preference number: 4 (lower is better) Translates to: GSVLPGSRCRVPGHPWRGTSQLL*GHRGQC Trigger: GCATTGACCTCGATGTCCCCACAGAAGCTGTGACGT...TCCCCTCCACGGGTGACCAGGAACACGGCATCTAGAGCCTGGTAGGACAGAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 |
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| CDS-3UTR TCA 90 bp | ATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGTCTTTTCCATATTGCGCCCCTTGGGGGTTCCCTTaGGGCTGGCACGTCACAGCT | + |
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Preference number: 4 (lower is better) Translates to: MNRTDPPSTPFQSFPYCAPWGFP*GWHVTA Trigger: AGCTGTGACGTGCCAGCCTCAAGGGAACCCCCAAGG...GGCGCAATATGGAAAAGACTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 |
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| CDS-3UTR GCA 90 bp | ATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGTCTTTTCCATATTGCGCCAGGAGTCCTCAGAGCTaGAGGAGCCACAGGTGGCGC | + |
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Preference number: 4 (lower is better) Translates to: MNRTDPPSTPFQSFPYCARSPQS*RSHRWR Trigger: GCGCCACCTGTGGCTCCTGCAGCTCTGAGGACTCCT...GGCGCAATATGGAAAAGACTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
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| CDS-3UTR TCA 90 bp | GTCTTTATTTACAGTAATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGTCCCTTGGGGGTTCCCTTaGGGCTGGCCTGGGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: VFIYSNESNRPSLYPLPVPWGFP*GWPGSR Trigger: CCTGGACCCAGGCCAGCCTCAAGGGAACCCCCAAGG...GACTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCATTACTGTAAATAAAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113280.8 |
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| CDS-3UTR CCA 90 bp | ACAGTAATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGTCTTTTCCATATGGACATGGTCTGGGCTaGGTCCAGGGCAGCGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: TVMNRTDPPSTPFQSFPYGHGLG*VQGSAG Trigger: CCCAGCGCTGCCCTGGACCCAGCCCAGACCATGTCC...ATATGGAAAAGACTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCATTACTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 |
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| CDS-3UTR CCA 90 bp | ATGTCTTTATTTACAGTAATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGCCCTTGAGGCTGGCCTaGGTCCAGGGCAGCGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: MSLFTVMNRTDPPSTPFQPLRLA*VQGSAG Trigger: CCCAGCGCTGCCCTGGACCCAGGCCAGCCTCAAGGG...CTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCATTACTGTAAATAAAGACAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113280.8 |
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| CDS-3UTR TCA 90 bp | ATGTCTTTATTTACAGTAATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGGCGCTGGGGACTCCATaGGGCGCGTCGCAGCGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: MSLFTVMNRTDPPSTPFQALGTP*GASQRE Trigger: TTCTCGCTGCGACGCGCCTCATGGAGTCCCCAGCGC...CTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCATTACTGTAAATAAAGACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
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| CDS-3UTR CCA 90 bp | GTCTTTATTTACAGTAATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGTCAGGAGGGACATGGTCTaGGCTGGGTCCAGGGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: VFIYSNESNRPSLYPLPVRRDMV*AGSRAA Trigger: CGCTGCCCTGGACCCAGCCCAGACCATGTCCCTCCT...GACTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCATTACTGTAAATAAAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 |
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| CDS-3UTR CCA 90 bp | ACAGTAATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGTCTTTTCCATATAGGAGGGACATGGTCTaGGCTGGGTCCAGGGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: TVMNRTDPPSTPFQSFPYRRDMV*AGSRAA Trigger: CGCTGCCCTGGACCCAGCCCAGACCATGTCCCTCCT...ATATGGAAAAGACTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCATTACTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 |
||
| CDS-3UTR CCA 90 bp | GTCTTTATTTACAGTAATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGTCCACTGTCATGGGGCATaGAGGGTGCCGCCTCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: VFIYSNESNRPSLYPLPVHCHGA*RVPPPP Trigger: CGGAGGAGGCGGCACCCTCCATGCCCCATGACAGTG...GACTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCATTACTGTAAATAAAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 |
||
| CDS-3UTR CCA 90 bp | GTCTTTATTTACAGTAATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGTCACTTCCGGTGGGCCTTaGACCCGCCCAGAGCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: VFIYSNESNRPSLYPLPVTSGGP*TRPEHR Trigger: ACGGTGCTCTGGGCGGGTCCAAGGCCCACCGGAAGT...GACTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCATTACTGTAAATAAAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
||
| CDS-3UTR CCA 90 bp | ACAGTAATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGTCTTTTCCATATACTTCCGGTGGGCCTTaGACCCGCCCAGAGCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: TVMNRTDPPSTPFQSFPYTSGGP*TRPEHR Trigger: ACGGTGCTCTGGGCGGGTCCAAGGCCCACCGGAAGT...ATATGGAAAAGACTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCATTACTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
||
| CDS-3UTR CCA 90 bp | ATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGTCTTTTCCATATTGCGCCCTGGCTGCCCAGAGATaGATGCGTCTGCAACTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: MNRTDPPSTPFQSFPYCALAAQR*MRLQLP Trigger: CGGAAGTTGCAGACGCATCCATCTCTGGGCAGCCAG...GGCGCAATATGGAAAAGACTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
||
| CDS-3UTR GCA 90 bp | TTATTTACAGTAATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGTCTTTTATGGGGCATGGAGGGTaGCGCCTCCTCCGGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LFTVMNRTDPPSTPFQSFMGHGG*RLLREA Trigger: GGCTTCCCGGAGGAGGCGGCACCCTCCATGCCCCAT...AAAAGACTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCATTACTGTAAATAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 |
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| CDS-3UTR GCA 90 bp | ATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGTCTTTTCCATATTGCGCCAGAGATGGATGCGTCTaGAACTTCCGGTGGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: MNRTDPPSTPFQSFPYCARDGCV*NFRWAL Trigger: CAAGGCCCACCGGAAGTTGCAGACGCATCCATCTCT...GGCGCAATATGGAAAAGACTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
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| CDS-3UTR GCA 90 bp | GTCTTTATTTACAGTAATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGTCAGGAGTCCTCAGAGCTaGAGGAGCCACAGGTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VFIYSNESNRPSLYPLPVRSPQS*RSHRWR Trigger: GCGCCACCTGTGGCTCCTGCAGCTCTGAGGACTCCT...GACTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCATTACTGTAAATAAAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
||
| CDS-3UTR GCA 90 bp | ATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGTCTTTTCCATATTGCGCCTATCTCCAAGCAGTCTaGGGACTCGCAGCAGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: MNRTDPPSTPFQSFPYCAYLQAV*GLAAGI Trigger: GATGCCTGCTGCGAGTCCGCAGACTGCTTGGAGATA...GGCGCAATATGGAAAAGACTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
||
| CDS-3UTR CCA 90 bp | GTCTTTATTTACAGTAATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGTCGTCTGCAACTTCCGGTaGGCCTTGGACCCGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VFIYSNESNRPSLYPLPVVCNFR*ALDPPR Trigger: TCTGGGCGGGTCCAAGGCCCACCGGAAGTTGCAGAC...GACTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCATTACTGTAAATAAAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
||
| CDS-3UTR CCA 90 bp | ATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGTCTTTTCCATATTGCGCCCAATCTTCCTGTGCCTaGAGAGGGACCTGTGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: MNRTDPPSTPFQSFPYCAQSSCA*RGTCEA Trigger: AGCCTCACAGGTCCCTCTCCAGGCACAGGAAGATTG...GGCGCAATATGGAAAAGACTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
||
| CDS-3UTR GCA 90 bp | GTCTTTATTTACAGTAATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGTCAGGCTGACCGGGCGCTaGCTCTGCTTTTCCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VFIYSNESNRPSLYPLPVRLTGR*LCFSFQ Trigger: CTGGAAGGAAAAGCAGAGGCAGCGCCCGGTCAGCCT...GACTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCATTACTGTAAATAAAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
||
| CDS-3UTR CCA 90 bp | GTCTTTATTTACAGTAATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGTCTGCAGGAGCCACAGGTaGCGCAGTCCAGGAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: VFIYSNESNRPSLYPLPVCRSHR*RSPGGC Trigger: ACATCCTCCTGGACTGCGCCACCTGTGGCTCCTGCA...GACTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCATTACTGTAAATAAAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
||
| CDS-3UTR GCA 90 bp | GTCTTTATTTACAGTAATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGTCAGGGTGAGTGGATCTTaGTACCTCCAGCCCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VFIYSNESNRPSLYPLPVRVSGS*YLQPRE Trigger: CTCCCTGGGCTGGAGGTAGCAAGATCCACTCACCCT...GACTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCATTACTGTAAATAAAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 |
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| CDS-3UTR GCA 90 bp | ATGTCTTTATTTACAGTAATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGAGGCTGACCGGGCGCTaGCTCTGCTTTTCCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: MSLFTVMNRTDPPSTPFQRLTGR*LCFSFQ Trigger: CTGGAAGGAAAAGCAGAGGCAGCGCCCGGTCAGCCT...CTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCATTACTGTAAATAAAGACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
||
| CDS-3UTR GCA 90 bp | ACAGTAATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGTCTTTTCCATATAGAGATGGATGCGTCTaGAACTTCCGGTGGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TVMNRTDPPSTPFQSFPYRDGCV*NFRWAL Trigger: CAAGGCCCACCGGAAGTTGCAGACGCATCCATCTCT...ATATGGAAAAGACTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCATTACTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
||
| CDS-3UTR GCA 90 bp | TTATTTACAGTAATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGTCTTTTAGGCTGACCGGGCGCTaGCTCTGCTTTTCCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LFTVMNRTDPPSTPFQSFRLTGR*LCFSFQ Trigger: CTGGAAGGAAAAGCAGAGGCAGCGCCCGGTCAGCCT...AAAAGACTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCATTACTGTAAATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
||
| CDS-3UTR CCA 90 bp | GTCTTTATTTACAGTAATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGTCCTTTTCCTTCCAGCCTaGCTGCCCAGAGATGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: VFIYSNESNRPSLYPLPVLFLPA*LPRDGC Trigger: GCATCCATCTCTGGGCAGCCAGGCTGGAAGGAAAAG...GACTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCATTACTGTAAATAAAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
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| CDS-3UTR GCA 90 bp | TTATTTACAGTAATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGTCTTTTTTGGCAGTAGTGGGGTaGAGCCTTGGGGGTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LFTVMNRTDPPSTPFQSFLAVVG*SLGGSL Trigger: AAGGGAACCCCCAAGGCTGCACCCCACTACTGCCAA...AAAAGACTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCATTACTGTAAATAA 49% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
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| CDS-3UTR GCA 90 bp | TTATTTACAGTAATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGTCTTTTCTGCCCAGAGATGGATaGGTCTGCAACTTCCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LFTVMNRTDPPSTPFQSFLPRDG*VCNFRW Trigger: CCACCGGAAGTTGCAGACGCATCCATCTCTGGGCAG...AAAAGACTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCATTACTGTAAATAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
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| CDS-3UTR CCA 90 bp | ATGTCTTTATTTACAGTAATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGTCTGAGAGGTGGTCGTaGCTGGAGCCATTTGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: MSLFTVMNRTDPPSTPFQSERWS*LEPFGS Trigger: ACTGCCAAATGGCTCCAGCCACGACCACCTCTCAGA...CTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCATTACTGTAAATAAAGACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
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| CDS-3UTR CCA 90 bp | ATGTCTTTATTTACAGTAATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGCAATCTTCCTGTGCCTaGAGAGGGACCTGTGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: MSLFTVMNRTDPPSTPFQQSSCA*RGTCEA Trigger: AGCCTCACAGGTCCCTCTCCAGGCACAGGAAGATTG...CTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCATTACTGTAAATAAAGACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
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| CDS-3UTR CCA 90 bp | TTATTTACAGTAATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGTCTTTTACGTCACAGCTTCTGTaGGGACATCGAGGTCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: LFTVMNRTDPPSTPFQSFTSQLL*GHRGQC Trigger: GCATTGACCTCGATGTCCCCACAGAAGCTGTGACGT...AAAAGACTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCATTACTGTAAATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 |
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| CDS CCA 90 bp | CCTGGCTGCCCAGAGATGGATGCGTCTGCAACTTCCGGTGGGCCTTaGACCCGCCCAGAGCACCGTTCCCCGCATGCCCTGCACTGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: PGCPEMDASATSGGP*TRPEHRSPHALHCP Trigger: CGGGCAGTGCAGGGCATGCGGGGAACGGTGCTCTGGGCGGGTCCAAGGCCCACCGGAAGTTGCAGACGCATCCATCTCTGGGCAGCCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 ENSMUST00000131971.2 ENSMUST00000152455.8 |
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| CDS CCA 90 bp | CTTCCAGCCTGGCTGCCCAGAGATGGATGCGTCTGCAACTTCCGGTaGGCCTTGGACCCGCCCAGAGCACCGTTCCCCGCATGCCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LPAWLPRDGCVCNFR*ALDPPRAPFPACPA Trigger: TGCAGGGCATGCGGGGAACGGTGCTCTGGGCGGGTCCAAGGCCCACCGGAAGTTGCAGACGCATCCATCTCTGGGCAGCCAGGCTGGAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 ENSMUST00000131971.2 ENSMUST00000152455.8 |
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| CDS CCA 90 bp | CCGGGCGCTGCCTCTGCTTTTCCTTCCAGCCTGGCTGCCCAGAGATaGATGCGTCTGCAACTTCCGGTGGGCCTTGGACCCGCCCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PGAASAFPSSLAAQR*MRLQLPVGLGPAQS Trigger: GCTCTGGGCGGGTCCAAGGCCCACCGGAAGTTGCAGACGCATCCATCTCTGGGCAGCCAGGCTGGAAGGAAAAGCAGAGGCAGCGCCCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 ENSMUST00000131971.2 ENSMUST00000152455.8 |
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| CDS GCA 90 bp | CAGAGCCTGCTGAGCCCGGAGACCACTGTCATGGGGCATGGAGGGTaGCGCCTCCTCCGGGAAGCCCTCTTCAGAAGATGCCTCTACAGG | + |
|
Preference number: 5 (lower is better) Translates to: QSLLSPETTVMGHGG*RLLREALFRRCLYR Trigger: CCTGTAGAGGCATCTTCTGAAGAGGGCTTCCCGGAGGAGGCGGCACCCTCCATGCCCCATGACAGTGGTCTCCGGGCTCAGCAGGCTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000132125.8 ENSMUST00000152455.8 |
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| CDS GCA 90 bp | CCTCTGCTTTTCCTTCCAGCCTGGCTGCCCAGAGATGGATGCGTCTaGAACTTCCGGTGGGCCTTGGACCCGCCCAGAGCACCGTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PLLFLPAWLPRDGCV*NFRWALDPPRAPFP Trigger: GGGGAACGGTGCTCTGGGCGGGTCCAAGGCCCACCGGAAGTTGCAGACGCATCCATCTCTGGGCAGCCAGGCTGGAAGGAAAAGCAGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 ENSMUST00000131971.2 ENSMUST00000152455.8 |
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| CDS CCA 90 bp | AGAGCACCGTTCCCCGCATGCCCTGCACTGCCCGGTTCTGAGAGGTaGTCGTGGCTGGAGCCATTTGGCAGTAGTGGGGTGCAGCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RAPFPACPALPGSER*SWLEPFGSSGVQPW Trigger: CCAAGGCTGCACCCCACTACTGCCAAATGGCTCCAGCCACGACCACCTCTCAGAACCGGGCAGTGCAGGGCATGCGGGGAACGGTGCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 ENSMUST00000131971.2 ENSMUST00000132125.8 ENSMUST00000152455.8 |
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| CDS-3UTR CAA 90 bp | TCTAGATGCCGTGTTCCTGGTCACCCGTGGAGGGGACCAGGCTACGCGTCTGAAAACTTCCGGTGGGCCTaGGACCCGCCCAGAGCACCG | + |
|
Preference number: 5 (lower is better) Translates to: SRCRVPGHPWRGPGYASENFRWA*DPPRAP Trigger: CGGTGCTCTGGGCGGGTCCAAGGCCCACCGGAAGTT...TTCAGACGCGTAGCCTGGTCCCCTCCACGGGTGACCAGGAACACGGCATCTAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
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| CDS-3UTR CAA 90 bp | GGTTCTGTCCTACCAGGCTCTAGATGCCGTGTTCCTGGTCACCCGTGGAGGGGAGCCTTGGGGGTTCCCTaGAGGCTGGCACGTCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: GSVLPGSRCRVPGHPWRGALGVP*RLARHS Trigger: GCTGTGACGTGCCAGCCTCAAGGGAACCCCCAAGGC...TCCCCTCCACGGGTGACCAGGAACACGGCATCTAGAGCCTGGTAGGACAGAACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 |
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| CDS TCA 90 bp | GCCGCCTCCTCCGGGAAGCCCTCTTCAGAAGATGCCTCTACAGGGTaGGTGGATCTTGCTACCTCCAGCCCAGGGAGGAGGGACATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: AASSGKPSSEDASTG*VDLATSSPGRRDMV Trigger: GACCATGTCCCTCCTCCCTGGGCTGGAGGTAGCAAGATCCACTCACCCTGTAGAGGCATCTTCTGAAGAGGGCTTCCCGGAGGAGGCGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000129360.2 ENSMUST00000132125.8 ENSMUST00000152455.8 |
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| CDS CCA 90 bp | CCTCCTCCGGGAAGCCCTCTTCAGAAGATGCCTCTACAGGGTGAGTaGATCTTGCTACCTCCAGCCCAGGGAGGAGGGACATGGTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PPPGSPLQKMPLQGE*ILLPPAQGGGTWSG Trigger: CCCAGACCATGTCCCTCCTCCCTGGGCTGGAGGTAGCAAGATCCACTCACCCTGTAGAGGCATCTTCTGAAGAGGGCTTCCCGGAGGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000129360.2 ENSMUST00000132125.8 ENSMUST00000152455.8 |
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| CDS CCA 90 bp | TGCAGCCTTGGGGGTTCCCTTGAGGCTGGCACGTCACAGCTTCTGTaGGGACATCGAGGTCAATGCTGTTCAGAGCCTGCTGAGCCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: CSLGGSLEAGTSQLL*GHRGQCCSEPAEPG Trigger: TCCGGGCTCAGCAGGCTCTGAACAGCATTGACCTCGATGTCCCCACAGAAGCTGTGACGTGCCAGCCTCAAGGGAACCCCCAAGGCTGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000132125.8 ENSMUST00000152455.8 |
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| CDS-3UTR CAA 90 bp | CCCTCCCACTCCTGGCCCCTCCCCTACCGTTCACAGTGTTCTGAGTTATGGCAGCAGGGTGAGTGGATCTaGCTACCTCCAGCCCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: PSHSWPLPYRSQCSELWQQGEWI*LPPAQG Trigger: TCCCTGGGCTGGAGGTAGCAAGATCCACTCACCCTG...CTGCCATAACTCAGAACACTGTGAACGGTAGGGGAGGGGCCAGGAGTGGGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 |
||
| CDS GCA 90 bp | CTTGAGGCTGGCACGTCACAGCTTCTGTGGGGACATCGAGGTCAATaGTGTTCAGAGCCTGCTGAGCCCGGAGACCACTGTCATGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LEAGTSQLLWGHRGQ*CSEPAEPGDHCHGA Trigger: TGCCCCATGACAGTGGTCTCCGGGCTCAGCAGGCTCTGAACAGCATTGACCTCGATGTCCCCACAGAAGCTGTGACGTGCCAGCCTCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000132125.8 ENSMUST00000152455.8 |
||
| CDS CCA 90 bp | AATAGACAGGACAGTATGCAGTGGACGCAGCAATCTTCCTGTGCCTaGAGAGGGACCTGTGAGGCTGACCGGGCGCTGCCTCTGCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: NRQDSMQWTQQSSCA*RGTCEADRALPLLF Trigger: GAAAAGCAGAGGCAGCGCCCGGTCAGCCTCACAGGTCCCTCTCCAGGCACAGGAAGATTGCTGCGTCCACTGCATACTGTCCTGTCTATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 ENSMUST00000131971.2 |
||
| CDS-3UTR CAA 90 bp | ATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGTCTTTTCCATATTGCGCCCGTGGCTGGAGCCATTaGGCAGTAGTGGGGTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: MNRTDPPSTPFQSFPYCARGWSH*AVVGCS Trigger: GCTGCACCCCACTACTGCCAAATGGCTCCAGCCACG...GGCGCAATATGGAAAAGACTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
||
| CDS-3UTR CAA 90 bp | ACAGTAATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGTCTTTTCCATATAACTTCCGGTGGGCCTaGGACCCGCCCAGAGCACCG | + |
|
Preference number: 5 (lower is better) Translates to: TVMNRTDPPSTPFQSFPYNFRWA*DPPRAP Trigger: CGGTGCTCTGGGCGGGTCCAAGGCCCACCGGAAGTT...ATATGGAAAAGACTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCATTACTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
||
| CDS-3UTR CAA 90 bp | ATGTCTTTATTTACAGTAATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGAACTTCCGGTGGGCCTaGGACCCGCCCAGAGCACCG | + |
|
Preference number: 5 (lower is better) Translates to: MSLFTVMNRTDPPSTPFQNFRWA*DPPRAP Trigger: CGGTGCTCTGGGCGGGTCCAAGGCCCACCGGAAGTT...CTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCATTACTGTAAATAAAGACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 |
||
| CDS GCA 90 bp | GGATGTTACAGAGCGTCAGGAACTCACAGAATAGACAGGACAGTATaGAGTGGACGCAGCAATCTTCCTGTGCCTGGAGAGGGACCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GCYRASGTHRIDRTV*SGRSNLPVPGEGPV Trigger: CACAGGTCCCTCTCCAGGCACAGGAAGATTGCTGCGTCCACTGCATACTGTCCTGTCTATTCTGTGAGTTCCTGACGCTCTGTAACATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 ENSMUST00000131971.2 |
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| CDS-3UTR CAA 90 bp | ACAGTAATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGTCTTTTCCATATCAGGGTGAGTGGATCTaGCTACCTCCAGCCCAGGGA | + |
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Preference number: 5 (lower is better) Translates to: TVMNRTDPPSTPFQSFPYQGEWI*LPPAQG Trigger: TCCCTGGGCTGGAGGTAGCAAGATCCACTCACCCTG...ATATGGAAAAGACTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCATTACTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 |
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| CDS-3UTR CAA 90 bp | TTATTTACAGTAATGAATCGAACAGACCCTCCCTCTACCCCCTTCCAGTCTTTTGCCTTGGGGGTTCCCTaGAGGCTGGCACGTCACAGC | + |
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Preference number: 5 (lower is better) Translates to: LFTVMNRTDPPSTPFQSFALGVP*RLARHS Trigger: GCTGTGACGTGCCAGCCTCAAGGGAACCCCCAAGGC...AAAAGACTGGAAGGGGGTAGAGGGAGGGTCTGTTCGATTCATTACTGTAAATAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 |
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| CDS GCA 72 bp | TGGGCCTTGGACCCGCCCAGAGCACCGTTCCCCGCATaGCCTGCACTGCCCGGTTCTGAGAGGTGGTCGTGG | + |
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Preference number: 6 (lower is better) Translates to: WALDPPRAPFPA*PALPGSERWSW Trigger: CCACGACCACCTCTCAGAACCGGGCAGTGCAGGGCATGCGGGGAACGGTGCTCTGGGCGGGTCCAAGGCCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 ENSMUST00000131971.2 ENSMUST00000152455.8 |
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| CDS GCA 72 bp | GTGCCTGGAGAGGGACCTGTGAGGCTGACCGGGCGCTaGCTCTGCTTTTCCTTCCAGCCTGGCTGCCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: VPGEGPVRLTGR*LCFSFQPGCPE Trigger: CTCTGGGCAGCCAGGCTGGAAGGAAAAGCAGAGGCAGCGCCCGGTCAGCCTCACAGGTCCCTCTCCAGGCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 ENSMUST00000131971.2 |
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| CDS CCA 72 bp | CCAGAGATGGATGCGTCTGCAACTTCCGGTGGGCCTTaGACCCGCCCAGAGCACCGTTCCCCGCATGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: PEMDASATSGGP*TRPEHRSPHAL Trigger: CAGGGCATGCGGGGAACGGTGCTCTGGGCGGGTCCAAGGCCCACCGGAAGTTGCAGACGCATCCATCTCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 ENSMUST00000131971.2 ENSMUST00000152455.8 |
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| CDS CCA 72 bp | TGGCTGCCCAGAGATGGATGCGTCTGCAACTTCCGGTaGGCCTTGGACCCGCCCAGAGCACCGTTCCCCGCA | + |
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Preference number: 6 (lower is better) Translates to: WLPRDGCVCNFR*ALDPPRAPFPA Trigger: TGCGGGGAACGGTGCTCTGGGCGGGTCCAAGGCCCACCGGAAGTTGCAGACGCATCCATCTCTGGGCAGCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 ENSMUST00000131971.2 ENSMUST00000152455.8 |
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| CDS CCA 72 bp | GCCCTGCACTGCCCGGTTCTGAGAGGTGGTCGTGGCTaGAGCCATTTGGCAGTAGTGGGGTGCAGCCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: ALHCPVLRGGRG*SHLAVVGCSLG Trigger: CCCAAGGCTGCACCCCACTACTGCCAAATGGCTCCAGCCACGACCACCTCTCAGAACCGGGCAGTGCAGGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 ENSMUST00000131971.2 ENSMUST00000132125.8 ENSMUST00000152455.8 |
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| CDS GCA 72 bp | GGTGGTCGTGGCTGGAGCCATTTGGCAGTAGTGGGGTaGAGCCTTGGGGGTTCCCTTGAGGCTGGCACGTCA | + |
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Preference number: 6 (lower is better) Translates to: GGRGWSHLAVVG*SLGGSLEAGTS Trigger: TGACGTGCCAGCCTCAAGGGAACCCCCAAGGCTGCACCCCACTACTGCCAAATGGCTCCAGCCACGACCACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000132125.8 ENSMUST00000152455.8 |
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| CDS GCA 72 bp | TTCCTTCCAGCCTGGCTGCCCAGAGATGGATGCGTCTaGAACTTCCGGTGGGCCTTGGACCCGCCCAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: FLPAWLPRDGCV*NFRWALDPPRA Trigger: TGCTCTGGGCGGGTCCAAGGCCCACCGGAAGTTGCAGACGCATCCATCTCTGGGCAGCCAGGCTGGAAGGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 ENSMUST00000131971.2 ENSMUST00000152455.8 |
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| CDS GCA 72 bp | GGAGAGGGACCTGTGAGGCTGACCGGGCGCTGCCTCTaGTTTTCCTTCCAGCCTGGCTGCCCAGAGATGGAT | + |
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Preference number: 6 (lower is better) Translates to: GEGPVRLTGRCL*FSFQPGCPEMD Trigger: ATCCATCTCTGGGCAGCCAGGCTGGAAGGAAAAGCAGAGGCAGCGCCCGGTCAGCCTCACAGGTCCCTCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 ENSMUST00000131971.2 |
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| CDS CCA 72 bp | TTCCCCGCATGCCCTGCACTGCCCGGTTCTGAGAGGTaGTCGTGGCTGGAGCCATTTGGCAGTAGTGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: FPACPALPGSER*SWLEPFGSSGV Trigger: CACCCCACTACTGCCAAATGGCTCCAGCCACGACCACCTCTCAGAACCGGGCAGTGCAGGGCATGCGGGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 ENSMUST00000131971.2 ENSMUST00000132125.8 ENSMUST00000152455.8 |
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| CDS CCA 72 bp | GACAGTATGCAGTGGACGCAGCAATCTTCCTGTGCCTaGAGAGGGACCTGTGAGGCTGACCGGGCGCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: DSMQWTQQSSCA*RGTCEADRALP Trigger: AGGCAGCGCCCGGTCAGCCTCACAGGTCCCTCTCCAGGCACAGGAAGATTGCTGCGTCCACTGCATACTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 ENSMUST00000131971.2 |
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| CDS CAA 72 bp | TGCCCGGTTCTGAGAGGTGGTCGTGGCTGGAGCCATTaGGCAGTAGTGGGGTGCAGCCTTGGGGGTTCCCTT | + |
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Preference number: 6 (lower is better) Translates to: CPVLRGGRGWSH*AVVGCSLGGSL Trigger: AAGGGAACCCCCAAGGCTGCACCCCACTACTGCCAAATGGCTCCAGCCACGACCACCTCTCAGAACCGGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 ENSMUST00000131971.2 ENSMUST00000132125.8 ENSMUST00000152455.8 |
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| CDS TCA 72 bp | GTGGGGACATCGAGGTCAATGCTGTTCAGAGCCTGCTaGGCCCGGAGACCACTGTCATGGGGCATGGAGGGT | + |
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Preference number: 6 (lower is better) Translates to: VGTSRSMLFRAC*ARRPLSWGMEG Trigger: ACCCTCCATGCCCCATGACAGTGGTCTCCGGGCTCAGCAGGCTCTGAACAGCATTGACCTCGATGTCCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000132125.8 ENSMUST00000152455.8 |
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| CDS TCA 72 bp | TCCGGGAAGCCCTCTTCAGAAGATGCCTCTACAGGGTaGGTGGATCTTGCTACCTCCAGCCCAGGGAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: SGKPSSEDASTG*VDLATSSPGRR Trigger: CCTCCTCCCTGGGCTGGAGGTAGCAAGATCCACTCACCCTGTAGAGGCATCTTCTGAAGAGGGCTTCCCGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000129360.2 ENSMUST00000132125.8 ENSMUST00000152455.8 |
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| CDS GCA 72 bp | GGCACGTCACAGCTTCTGTGGGGACATCGAGGTCAATaGTGTTCAGAGCCTGCTGAGCCCGGAGACCACTGT | + |
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Preference number: 6 (lower is better) Translates to: GTSQLLWGHRGQ*CSEPAEPGDHC Trigger: ACAGTGGTCTCCGGGCTCAGCAGGCTCTGAACAGCATTGACCTCGATGTCCCCACAGAAGCTGTGACGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000132125.8 ENSMUST00000152455.8 |
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| CDS CCA 72 bp | GGGGGTTCCCTTGAGGCTGGCACGTCACAGCTTCTGTaGGGACATCGAGGTCAATGCTGTTCAGAGCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: GGSLEAGTSQLL*GHRGQCCSEPA Trigger: AGCAGGCTCTGAACAGCATTGACCTCGATGTCCCCACAGAAGCTGTGACGTGCCAGCCTCAAGGGAACCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000132125.8 ENSMUST00000152455.8 |
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| CDS CCA 72 bp | GGAAGCCCTCTTCAGAAGATGCCTCTACAGGGTGAGTaGATCTTGCTACCTCCAGCCCAGGGAGGAGGGACA | + |
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Preference number: 6 (lower is better) Translates to: GSPLQKMPLQGE*ILLPPAQGGGT Trigger: TGTCCCTCCTCCCTGGGCTGGAGGTAGCAAGATCCACTCACCCTGTAGAGGCATCTTCTGAAGAGGGCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000129360.2 ENSMUST00000132125.8 ENSMUST00000152455.8 |
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| CDS GCA 72 bp | CTCTTCAGAAGATGCCTCTACAGGGTGAGTGGATCTTaGTACCTCCAGCCCAGGGAGGAGGGACATGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: LFRRCLYRVSGS*YLQPREEGHGL Trigger: CAGACCATGTCCCTCCTCCCTGGGCTGGAGGTAGCAAGATCCACTCACCCTGTAGAGGCATCTTCTGAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000129360.2 ENSMUST00000132125.8 ENSMUST00000152455.8 |
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| CDS CAA 72 bp | CCTCTTCAGAAGATGCCTCTACAGGGTGAGTGGATCTaGCTACCTCCAGCCCAGGGAGGAGGGACATGGTCT | + |
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Preference number: 6 (lower is better) Translates to: PLQKMPLQGEWI*LPPAQGGGTWS Trigger: AGACCATGTCCCTCCTCCCTGGGCTGGAGGTAGCAAGATCCACTCACCCTGTAGAGGCATCTTCTGAAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000129360.2 ENSMUST00000132125.8 ENSMUST00000152455.8 |
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| CDS CCA 72 bp | GTCAGGAACTCACAGAATAGACAGGACAGTATGCAGTaGACGCAGCAATCTTCCTGTGCCTGGAGAGGGACC | + |
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Preference number: 6 (lower is better) Translates to: VRNSQNRQDSMQ*TQQSSCAWRGT Trigger: GGTCCCTCTCCAGGCACAGGAAGATTGCTGCGTCCACTGCATACTGTCCTGTCTATTCTGTGAGTTCCTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035375.14 ENSMUST00000066368.13 ENSMUST00000113280.8 ENSMUST00000131971.2 |
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