Pregenerated sensors for MCUR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021371Ensembl transcript IDs: ENSMUST00000021800.6
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACACTGCAGCTGCTGCAGCAGAGGCAAGACTGCGTGGGGAACGGCTaGTGGTCAGGCACAGAAGGGCTCTGGGCTGATGCCAAGGATTCT | + |
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Preference number: 1 (lower is better) Translates to: TLQLLQQRQDCVGNG*WSGTEGLWADAKDS Trigger: AGAATCCTTGGCATCAGCCCAGAGCCCTTCTGTGCCTGACCAGCAGCCGTTCCCCACGCAGTCTTGCCTCTGCTGCAGCAGCTGCAGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR GCA 90 bp | AGCACAGGCCCACCCAGGCCAGGCTTGCTGCCCCCAGAATCTTGGTaGTTAAAGCGTTCAGAGACAGACTCCAGCAAGACACCCGCCTCG | + |
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Preference number: 1 (lower is better) Translates to: STGPPRPGLLPPESW*LKRSETDSSKTPAS Trigger: CGAGGCGGGTGTCTTGCTGGAGTCTGTCTCTGAACGCTTTAAGCACCAAGATTCTGGGGGCAGCAAGCCTGGCCTGGGTGGGCCTGTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR CCA 90 bp | CACAGCACAGGCCCACCCAGGCCAGGCTTGCTGCCCCCAGAATCTTaGTGCTTAAAGCGTTCAGAGACAGACTCCAGCAAGACACCCGCC | + |
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Preference number: 1 (lower is better) Translates to: HSTGPPRPGLLPPES*CLKRSETDSSKTPA Trigger: GGCGGGTGTCTTGCTGGAGTCTGTCTCTGAACGCTTTAAGCACCAAGATTCTGGGGGCAGCAAGCCTGGCCTGGGTGGGCCTGTGCTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR GCA 90 bp | AGTCCTGCATCATTAACACTGCAGCTGCTGCAGCAGAGGCAAGACTaGGTGGGGAACGGCTGCTGGTCAGGCACAGAAGGGCTCTGGGCT | + |
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Preference number: 1 (lower is better) Translates to: SPASLTLQLLQQRQD*VGNGCWSGTEGLWA Trigger: AGCCCAGAGCCCTTCTGTGCCTGACCAGCAGCCGTTCCCCACGCAGTCTTGCCTCTGCTGCAGCAGCTGCAGTGTTAATGATGCAGGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR GCA 90 bp | GCAAAGGTCCCCACAGGCTGGACTCAAGGCTGCTGCCTGGAAACCTaGCAGGTCCCTCCTAAGAGCTCCGCAGCTTCATGGAGGTTCAGT | + |
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Preference number: 1 (lower is better) Translates to: AKVPTGWTQGCCLET*QVPPKSSAASWRFS Trigger: ACTGAACCTCCATGAAGCTGCGGAGCTCTTAGGAGGGACCTGGCAGGTTTCCAGGCAGCAGCCTTGAGTCCAGCCTGTGGGGACCTTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR CCA 90 bp | CTGCAGCTGCTGCAGCAGAGGCAAGACTGCGTGGGGAACGGCTGCTaGTCAGGCACAGAAGGGCTCTGGGCTGATGCCAAGGATTCTTTA | + |
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Preference number: 1 (lower is better) Translates to: LQLLQQRQDCVGNGC*SGTEGLWADAKDSL Trigger: TAAAGAATCCTTGGCATCAGCCCAGAGCCCTTCTGTGCCTGACCAGCAGCCGTTCCCCACGCAGTCTTGCCTCTGCTGCAGCAGCTGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR CCA 90 bp | CAGCTATTGCAAAGGTCCCCACAGGCTGGACTCAAGGCTGCTGCCTaGAAACCTGCCAGGTCCCTCCTAAGAGCTCCGCAGCTTCATGGA | + |
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Preference number: 1 (lower is better) Translates to: QLLQRSPQAGLKAAA*KPARSLLRAPQLHG Trigger: TCCATGAAGCTGCGGAGCTCTTAGGAGGGACCTGGCAGGTTTCCAGGCAGCAGCCTTGAGTCCAGCCTGTGGGGACCTTTGCAATAGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR GCA 90 bp | ACAATGGGAACCCAGAGACAAAGGCCCCTAAGGTGTGGCGAGTCCTaGATCATTAACACTGCAGCTGCTGCAGCAGAGGCAAGACTGCGT | + |
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Preference number: 1 (lower is better) Translates to: TMGTQRQRPLRCGES*IINTAAAAAEARLR Trigger: ACGCAGTCTTGCCTCTGCTGCAGCAGCTGCAGTGTTAATGATGCAGGACTCGCCACACCTTAGGGGCCTTTGTCTCTGGGTTCCCATTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR TCA 90 bp | GGGAAGGCTAGCATTCGGAAAGGTAGAGGCTGGGCACGGTGGTGTTaGAGCCGGATAGTGAGTTCAAAGCCAACCTGGCCTACAAAGCAA | + |
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Preference number: 1 (lower is better) Translates to: GKASIRKGRGWARWC*SRIVSSKPTWPTKQ Trigger: TTGCTTTGTAGGCCAGGTTGGCTTTGAACTCACTATCCGGCTTCAACACCACCGTGCCCAGCCTCTACCTTTCCGAATGCTAGCCTTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR TCA 90 bp | AATAACTGCAGCTGCTCCAGGACCTATCTGTTTCCGATGGAGAGCTaGGGCGGCTGTGGGGGTGTCTGCTACCACAGAAGAAGTCAATGC | + |
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Preference number: 1 (lower is better) Translates to: NNCSCSRTYLFPMES*GGCGGVCYHRRSQC Trigger: GCATTGACTTCTTCTGTGGTAGCAGACACCCCCACAGCCGCCTCAGCTCTCCATCGGAAACAGATAGGTCCTGGAGCAGCTGCAGTTATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR CCA 90 bp | CACAGCACACAGGGCTGGGGAAGCAAAGTACTTGCCGTATCAGCTTaGGAAGGAGGGTCAAGGAAAATCGAGGGAAGATGGTACCAAGGC | + |
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Preference number: 1 (lower is better) Translates to: HSTQGWGSKVLAVSA*EGGSRKIEGRWYQG Trigger: GCCTTGGTACCATCTTCCCTCGATTTTCCTTGACCCTCCTTCCCAAGCTGATACGGCAAGTACTTTGCTTCCCCAGCCCTGTGTGCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR TCA 90 bp | CTGCGTGGGGAACGGCTGCTGGTCAGGCACAGAAGGGCTCTGGGCTaGTGCCAAGGATTCTTTAGACTTAAAGCTACCTTGTTTTCCACA | + |
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Preference number: 1 (lower is better) Translates to: LRGERLLVRHRRALG*CQGFFRLKATLFST Trigger: TGTGGAAAACAAGGTAGCTTTAAGTCTAAAGAATCCTTGGCATCAGCCCAGAGCCCTTCTGTGCCTGACCAGCAGCCGTTCCCCACGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR CCA 90 bp | TTCTCCAAAATAACTGCAGCTGCTCCAGGACCTATCTGTTTCCGATaGAGAGCTGAGGCGGCTGTGGGGGTGTCTGCTACCACAGAAGAA | + |
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Preference number: 1 (lower is better) Translates to: FSKITAAAPGPICFR*RAEAAVGVSATTEE Trigger: TTCTTCTGTGGTAGCAGACACCCCCACAGCCGCCTCAGCTCTCCATCGGAAACAGATAGGTCCTGGAGCAGCTGCAGTTATTTTGGAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR GCA 90 bp | GCTGATTTATTCCACCAATCCGATGGCGCGGTCTCTTGTGGTTTCTaGACTATGTGCACCAGCTTGTGCATTTGTGCCTGTGTGGGGCAA | + |
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Preference number: 1 (lower is better) Translates to: ADLFHQSDGAVSCGF*TMCTSLCICACVGQ Trigger: TTGCCCCACACAGGCACAAATGCACAAGCTGGTGCACATAGTGCAGAAACCACAAGAGACCGCGCCATCGGATTGGTGGAATAAATCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR CAA 90 bp | GCACAGCACAGGCCCACCCAGGCCAGGCTTGCTGCCCCCAGAATCTaGGTGCTTAAAGCGTTCAGAGACAGACTCCAGCAAGACACCCGC | + |
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Preference number: 2 (lower is better) Translates to: AQHRPTQARLAAPRI*VLKAFRDRLQQDTR Trigger: GCGGGTGTCTTGCTGGAGTCTGTCTCTGAACGCTTTAAGCACCAAGATTCTGGGGGCAGCAAGCCTGGCCTGGGTGGGCCTGTGCTGTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR-3UTR GCA 90 bp | ACCCAGGCCAGGCTTGCTGCCCCCAGAATCTTGGTGCTTAAAGCGTTCAGAGACTGCGTGGGGAACGGCTaGTGGTCAGGCACAGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: TQARLAAPRILVLKAFRDCVGNG*WSGTEG Trigger: CCCTTCTGTGCCTGACCAGCAGCCGTTCCCCACGCA...GTCTCTGAACGCTTTAAGCACCAAGATTCTGGGGGCAGCAAGCCTGGCCTGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR-3UTR CCA 90 bp | AAGGAGGGTCAAGGAAAATCGAGGGAAGATGGTACCAAGGCACAGCACAGGCCCGAGCTGAGGCGGCTGTaGGGGTGTCTGCTACCACAG | + |
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Preference number: 2 (lower is better) Translates to: KEGQGKSREDGTKAQHRPELRRL*GCLLPQ Trigger: CTGTGGTAGCAGACACCCCCACAGCCGCCTCAGCTC...GGGCCTGTGCTGTGCCTTGGTACCATCTTCCCTCGATTTTCCTTGACCCTCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR CAA 90 bp | TGCCAGTCCTGGCACACAGCACACAGGGCTGGGGAAGCAAAGTACTaGCCGTATCAGCTTGGGAAGGAGGGTCAAGGAAAATCGAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: CQSWHTAHRAGEAKY*PYQLGKEGQGKSRE Trigger: TTCCCTCGATTTTCCTTGACCCTCCTTCCCAAGCTGATACGGCAAGTACTTTGCTTCCCCAGCCCTGTGTGCTGTGTGCCAGGACTGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR CAA 90 bp | ACAGTGAAGGAAGTCCACCCACTGGACTCTTACCCTGTACAGCTATaGCAAAGGTCCCCACAGGCTGGACTCAAGGCTGCTGCCTGGAAA | + |
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Preference number: 2 (lower is better) Translates to: TVKEVHPLDSYPVQL*QRSPQAGLKAAAWK Trigger: TTTCCAGGCAGCAGCCTTGAGTCCAGCCTGTGGGGACCTTTGCAATAGCTGTACAGGGTAAGAGTCCAGTGGGTGGACTTCCTTCACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR-3UTR TCA 90 bp | ACTGGACTCTTACCCTGTACAGCTATTGCAAAGGTCCCCACAGGCTGGACTCAACTCTCACTGGGCAAGTaGCAACCTGAGCCGCTCACA | + |
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Preference number: 2 (lower is better) Translates to: TGLLPCTAIAKVPTGWTQLSLGK*QPEPLT Trigger: TGTGAGCGGCTCAGGTTGTCACTTGCCCAGTGAGAG...TTGAGTCCAGCCTGTGGGGACCTTTGCAATAGCTGTACAGGGTAAGAGTCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR-3UTR GCA 90 bp | AAGGAGGGTCAAGGAAAATCGAGGGAAGATGGTACCAAGGCACAGCACAGGCCCACCCTGTACAGCTATTaGAAAGGTCCCCACAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: KEGQGKSREDGTKAQHRPTLYSY*KGPHRL Trigger: CAGCCTGTGGGGACCTTTGCAATAGCTGTACAGGGT...GGGCCTGTGCTGTGCCTTGGTACCATCTTCCCTCGATTTTCCTTGACCCTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR-3UTR GCA 90 bp | ACCCAGGCCAGGCTTGCTGCCCCCAGAATCTTGGTGCTTAAAGCGTTCAGAGACGGACAGAAAATGCAATaGCTAGCAGGAAGGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: TQARLAAPRILVLKAFRDGQKMQ*LAGRQR Trigger: CCTCTGCCTTCCTGCTAGGCATTGCATTTTCTGTCC...GTCTCTGAACGCTTTAAGCACCAAGATTCTGGGGGCAGCAAGCCTGGCCTGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR-3UTR CCA 90 bp | AGCCAGAGGGAGCTTTGTGCTGCCGTGCTAATGCTTGTAATCCCAGCACTTGGGGGAGTCTTGAAAGTGTaGTCCATCCACACGGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: SQRELCAAVLMLVIPALGGVLKV*SIHTAQ Trigger: CTGAGCCGTGTGGATGGACCACACTTTCAAGACTCC...CCCAAGTGCTGGGATTACAAGCATTAGCACGGCAGCACAAAGCTCCCTCTGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR-3UTR CCA 90 bp | AGCCAGAGGGAGCTTTGTGCTGCCGTGCTAATGCTTGTAATCCCAGCACTTGGGTGGCGCGGTCTCTTGTaGTTTCTGCACTATGTGCAC | + |
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Preference number: 2 (lower is better) Translates to: SQRELCAAVLMLVIPALGWRGLL*FLHYVH Trigger: GTGCACATAGTGCAGAAACCACAAGAGACCGCGCCA...CCCAAGTGCTGGGATTACAAGCATTAGCACGGCAGCACAAAGCTCCCTCTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR-3UTR GCA 90 bp | AAGGAGGGTCAAGGAAAATCGAGGGAAGATGGTACCAAGGCACAGCACAGGCCCAGGTGTGGCGAGTCCTaGATCATTAACACTGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: KEGQGKSREDGTKAQHRPRCGES*IINTAA Trigger: AGCTGCAGTGTTAATGATGCAGGACTCGCCACACCT...GGGCCTGTGCTGTGCCTTGGTACCATCTTCCCTCGATTTTCCTTGACCCTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR-3UTR GCA 90 bp | TCCACCCACTGGACTCTTACCCTGTACAGCTATTGCAAAGGTCCCCACAGGCTGTCACTGCTTCCCAAATaGTCACTCTCATCCGAGTGC | + |
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Preference number: 2 (lower is better) Translates to: STHWTLTLYSYCKGPHRLSLLPK*SLSSEC Trigger: GCACTCGGATGAGAGTGAGCATTTGGGAAGCAGTGA...CAGCCTGTGGGGACCTTTGCAATAGCTGTACAGGGTAAGAGTCCAGTGGGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR-3UTR CCA 90 bp | TCCAAAATAACTGCAGCTGCTCCAGGACCTATCTGTTTCCGATGGAGAGCTGAGCTGGGGCTCTCTCACTaGGCAAGTGACAACCTGAGC | + |
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Preference number: 2 (lower is better) Translates to: SKITAAAPGPICFRWRAELGLSH*ASDNLS Trigger: GCTCAGGTTGTCACTTGCCCAGTGAGAGAGCCCCAG...CTCAGCTCTCCATCGGAAACAGATAGGTCCTGGAGCAGCTGCAGTTATTTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR-3UTR GCA 90 bp | ACTGGACTCTTACCCTGTACAGCTATTGCAAAGGTCCCCACAGGCTGGACTCAAACCTTGTTTTCCACATaGCTTCCCACGCTCTCCACC | + |
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Preference number: 2 (lower is better) Translates to: TGLLPCTAIAKVPTGWTQTLFST*LPTLST Trigger: GGTGGAGAGCGTGGGAAGGCATGTGGAAAACAAGGT...TTGAGTCCAGCCTGTGGGGACCTTTGCAATAGCTGTACAGGGTAAGAGTCCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR-3UTR GCA 90 bp | ACTGGACTCTTACCCTGTACAGCTATTGCAAAGGTCCCCACAGGCTGGACTCAAATGTGCACCAGCTTGTaGATTTGTGCCTGTGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: TGLLPCTAIAKVPTGWTQMCTSL*ICACVG Trigger: CCCCACACAGGCACAAATGCACAAGCTGGTGCACAT...TTGAGTCCAGCCTGTGGGGACCTTTGCAATAGCTGTACAGGGTAAGAGTCCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR-3UTR GCA 90 bp | ACCCAGGCCAGGCTTGCTGCCCCCAGAATCTTGGTGCTTAAAGCGTTCAGAGACGGTTTCTGCACTATGTaGACCAGCTTGTGCATTTGT | + |
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Preference number: 2 (lower is better) Translates to: TQARLAAPRILVLKAFRDGFCTM*TSLCIC Trigger: ACAAATGCACAAGCTGGTGCACATAGTGCAGAAACC...GTCTCTGAACGCTTTAAGCACCAAGATTCTGGGGGCAGCAAGCCTGGCCTGGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR-3UTR GCA 90 bp | TCCACCCACTGGACTCTTACCCTGTACAGCTATTGCAAAGGTCCCCACAGGCTGGTCTCTTGTGGTTTCTaGACTATGTGCACCAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: STHWTLTLYSYCKGPHRLVSCGF*TMCTSL Trigger: CAAGCTGGTGCACATAGTGCAGAAACCACAAGAGAC...CAGCCTGTGGGGACCTTTGCAATAGCTGTACAGGGTAAGAGTCCAGTGGGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR-3UTR GCA 90 bp | GAGGGGACAGAAAATGCAATGCCTAGCAGGAAGGCAGAGGAACAGTTTAGGTATTGCTGCCTGGAAACCTaGCAGGTCCCTCCTAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: EGTENAMPSRKAEEQFRYCCLET*QVPPKS Trigger: GCTCTTAGGAGGGACCTGGCAGGTTTCCAGGCAGCA...ATACCTAAACTGTTCCTCTGCCTTCCTGCTAGGCATTGCATTTTCTGTCCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR-3UTR TCA 90 bp | TCCACCCACTGGACTCTTACCCTGTACAGCTATTGCAAAGGTCCCCACAGGCTGTTTGAGCCCTTTCTCTaGCATCAAGCAGTCAACTGT | + |
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Preference number: 2 (lower is better) Translates to: STHWTLTLYSYCKGPHRLFEPFL*HQAVNC Trigger: ACAGTTGACTGCTTGATGTCAGAGAAAGGGCTCAAA...CAGCCTGTGGGGACCTTTGCAATAGCTGTACAGGGTAAGAGTCCAGTGGGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR-3UTR GCA 90 bp | AAGGAGGGTCAAGGAAAATCGAGGGAAGATGGTACCAAGGCACAGCACAGGCCCCTTCTCCAAAATAACTaGAGCTGCTCCAGGACCTAT | + |
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Preference number: 2 (lower is better) Translates to: KEGQGKSREDGTKAQHRPLLQNN*SCSRTY Trigger: ATAGGTCCTGGAGCAGCTGCAGTTATTTTGGAGAAG...GGGCCTGTGCTGTGCCTTGGTACCATCTTCCCTCGATTTTCCTTGACCCTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR-3UTR CCA 90 bp | AGCCAGAGGGAGCTTTGTGCTGCCGTGCTAATGCTTGTAATCCCAGCACTTGGGGTTCAGTACAGTGTCTaGTCACACTATCCTCACCAT | + |
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Preference number: 2 (lower is better) Translates to: SQRELCAAVLMLVIPALGVQYSV*SHYPHH Trigger: ATGGTGAGGATAGTGTGACCAGACACTGTACTGAAC...CCCAAGTGCTGGGATTACAAGCATTAGCACGGCAGCACAAAGCTCCCTCTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR-3UTR CCA 90 bp | TCCAAAATAACTGCAGCTGCTCCAGGACCTATCTGTTTCCGATGGAGAGCTGAGAGTTCAAAGCCAACCTaGCCTACAAAGCAAGACCTT | + |
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Preference number: 2 (lower is better) Translates to: SKITAAAPGPICFRWRAESSKPT*PTKQDL Trigger: AAGGTCTTGCTTTGTAGGCCAGGTTGGCTTTGAACT...CTCAGCTCTCCATCGGAAACAGATAGGTCCTGGAGCAGCTGCAGTTATTTTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR-3UTR CCA 90 bp | GAAGGAGGGTCAAGGAAAATCGAGGGAAGATGGTACCAAGGCACAGCACAGGCCGATTTCCATAATATGTaGGGCTCAGAATCTTTTTAC | + |
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Preference number: 2 (lower is better) Translates to: EGGSRKIEGRWYQGTAQADFHNM*GSESFY Trigger: GTAAAAAGATTCTGAGCCCCACATATTATGGAAATC...GGCCTGTGCTGTGCCTTGGTACCATCTTCCCTCGATTTTCCTTGACCCTCCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR-3UTR CCA 90 bp | AGGAGTTTAGCAAAAGTATGCAGGCAAGGAGTGAAACTGGGCTTAAGGCTCTTTAGCTCCGCAGCTTCATaGAGGTTCAGTACAGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: RSLAKVCRQGVKLGLRLFSSAAS*RFSTVS Trigger: AGACACTGTACTGAACCTCCATGAAGCTGCGGAGCT...AAAGAGCCTTAAGCCCAGTTTCACTCCTTGCCTGCATACTTTTGCTAAACTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR GCA 72 bp | CTGCTGCAGCAGAGGCAAGACTGCGTGGGGAACGGCTaGTGGTCAGGCACAGAAGGGCTCTGGGCTGATGCC | + |
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Preference number: 3 (lower is better) Translates to: LLQQRQDCVGNG*WSGTEGLWADA Trigger: GGCATCAGCCCAGAGCCCTTCTGTGCCTGACCAGCAGCCGTTCCCCACGCAGTCTTGCCTCTGCTGCAGCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR GCA 72 bp | CCCACAGGCTGGACTCAAGGCTGCTGCCTGGAAACCTaGCAGGTCCCTCCTAAGAGCTCCGCAGCTTCATGG | + |
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Preference number: 3 (lower is better) Translates to: PTGWTQGCCLET*QVPPKSSAASW Trigger: CCATGAAGCTGCGGAGCTCTTAGGAGGGACCTGGCAGGTTTCCAGGCAGCAGCCTTGAGTCCAGCCTGTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR GCA 72 bp | GTGTGGGGCAAGCCAGGAAGGGTCCCCCAGTGTCACTaGTTCCCAAATGCTCACTCTCATCCGAGTGCCAGC | + |
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Preference number: 3 (lower is better) Translates to: VWGKPGRVPQCH*FPNAHSHPSAS Trigger: GCTGGCACTCGGATGAGAGTGAGCATTTGGGAAGCAGTGACACTGGGGGACCCTTCCTGGCTTGCCCCACAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR GCA 72 bp | ATTGCAAAGGTCCCCACAGGCTGGACTCAAGGCTGCTaGCTGGAAACCTGCCAGGTCCCTCCTAAGAGCTCC | + |
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Preference number: 3 (lower is better) Translates to: IAKVPTGWTQGC*LETCQVPPKSS Trigger: GGAGCTCTTAGGAGGGACCTGGCAGGTTTCCAGGCAGCAGCCTTGAGTCCAGCCTGTGGGGACCTTTGCAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR TCA 72 bp | AGCTGCTCCAGGACCTATCTGTTTCCGATGGAGAGCTaGGGCGGCTGTGGGGGTGTCTGCTACCACAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: SCSRTYLFPMES*GGCGGVCYHRR Trigger: TCTTCTGTGGTAGCAGACACCCCCACAGCCGCCTCAGCTCTCCATCGGAAACAGATAGGTCCTGGAGCAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR TCA 72 bp | GCACTGCCAAGCACTGGGGCTCTCTCACTGGGCAAGTaGCAACCTGAGCCGCTCACAGGGAAAAGTGTACTT | + |
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Preference number: 3 (lower is better) Translates to: ALPSTGALSLGK*QPEPLTGKSVL Trigger: AAGTACACTTTTCCCTGTGAGCGGCTCAGGTTGTCACTTGCCCAGTGAGAGAGCCCCAGTGCTTGGCAGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR GCA 72 bp | ACCCAGAGACAAAGGCCCCTAAGGTGTGGCGAGTCCTaGATCATTAACACTGCAGCTGCTGCAGCAGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: TQRQRPLRCGES*IINTAAAAAEA Trigger: TGCCTCTGCTGCAGCAGCTGCAGTGTTAATGATGCAGGACTCGCCACACCTTAGGGGCCTTTGTCTCTGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR CCA 72 bp | TTACCCTGTACAGCTATTGCAAAGGTCCCCACAGGCTaGACTCAAGGCTGCTGCCTGGAAACCTGCCAGGTC | + |
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Preference number: 3 (lower is better) Translates to: LPCTAIAKVPTG*TQGCCLETCQV Trigger: GACCTGGCAGGTTTCCAGGCAGCAGCCTTGAGTCCAGCCTGTGGGGACCTTTGCAATAGCTGTACAGGGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR TCA 72 bp | AGCATTCGGAAAGGTAGAGGCTGGGCACGGTGGTGTTaGAGCCGGATAGTGAGTTCAAAGCCAACCTGGCCT | + |
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Preference number: 3 (lower is better) Translates to: SIRKGRGWARWC*SRIVSSKPTWP Trigger: AGGCCAGGTTGGCTTTGAACTCACTATCCGGCTTCAACACCACCGTGCCCAGCCTCTACCTTTCCGAATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR CCA 72 bp | ACCTGCCAGGTCCCTCCTAAGAGCTCCGCAGCTTCATaGAGGTTCAGTACAGTGTCTGGTCACACTATCCTC | + |
|
Preference number: 3 (lower is better) Translates to: TCQVPPKSSAAS*RFSTVSGHTIL Trigger: GAGGATAGTGTGACCAGACACTGTACTGAACCTCCATGAAGCTGCGGAGCTCTTAGGAGGGACCTGGCAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR GCA 72 bp | GCCAGGAAGGGTCCCCCAGTGTCACTGCTTCCCAAATaGTCACTCTCATCCGAGTGCCAGCAATTTAAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: ARKGPPVSLLPK*SLSSECQQFKE Trigger: CTCTTTAAATTGCTGGCACTCGGATGAGAGTGAGCATTTGGGAAGCAGTGACACTGGGGGACCCTTCCTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR GCA 72 bp | GTCTCTTGTGGTTTCTGCACTATGTGCACCAGCTTGTaGATTTGTGCCTGTGTGGGGCAAGCCAGGAAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: VSCGFCTMCTSL*ICACVGQARKG Trigger: ACCCTTCCTGGCTTGCCCCACACAGGCACAAATGCACAAGCTGGTGCACATAGTGCAGAAACCACAAGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR GCA 72 bp | GGCACACAGCACACAGGGCTGGGGAAGCAAAGTACTTaGCGTATCAGCTTGGGAAGGAGGGTCAAGGAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: GTQHTGLGKQST*RISLGRRVKEN Trigger: ATTTTCCTTGACCCTCCTTCCCAAGCTGATACGGCAAGTACTTTGCTTCCCCAGCCCTGTGTGCTGTGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
||
| 3UTR CCA 72 bp | GTGGGGAACGGCTGCTGGTCAGGCACAGAAGGGCTCTaGGCTGATGCCAAGGATTCTTTAGACTTAAAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: VGNGCWSGTEGL*ADAKDSLDLKL Trigger: TAGCTTTAAGTCTAAAGAATCCTTGGCATCAGCCCAGAGCCCTTCTGTGCCTGACCAGCAGCCGTTCCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
||
| 3UTR CCA 72 bp | CAGGGCTGGGGAAGCAAAGTACTTGCCGTATCAGCTTaGGAAGGAGGGTCAAGGAAAATCGAGGGAAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: QGWGSKVLAVSA*EGGSRKIEGRW Trigger: CCATCTTCCCTCGATTTTCCTTGACCCTCCTTCCCAAGCTGATACGGCAAGTACTTTGCTTCCCCAGCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
||
| 3UTR-3UTR CAA 90 bp | GAAGGAGGGTCAAGGAAAATCGAGGGAAGATGGTACCAAGGCACAGCACAGGCCGGCGTTCTAACTGACTaGCTTGGCATACTTGAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: EGGSRKIEGRWYQGTAQAGVLTD*LGILEG Trigger: CCCTTCAAGTATGCCAAGCAAGTCAGTTAGAACGCC...GGCCTGTGCTGTGCCTTGGTACCATCTTCCCTCGATTTTCCTTGACCCTCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR TCA 72 bp | GAACGGCTGCTGGTCAGGCACAGAAGGGCTCTGGGCTaGTGCCAAGGATTCTTTAGACTTAAAGCTACCTTG | + |
|
Preference number: 3 (lower is better) Translates to: ERLLVRHRRALG*CQGFFRLKATL Trigger: CAAGGTAGCTTTAAGTCTAAAGAATCCTTGGCATCAGCCCAGAGCCCTTCTGTGCCTGACCAGCAGCCGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
||
| 3UTR GCA 72 bp | TTCCACCAATCCGATGGCGCGGTCTCTTGTGGTTTCTaGACTATGTGCACCAGCTTGTGCATTTGTGCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: FHQSDGAVSCGF*TMCTSLCICAC Trigger: ACAGGCACAAATGCACAAGCTGGTGCACATAGTGCAGAAACCACAAGAGACCGCGCCATCGGATTGGTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
||
| 3UTR-3UTR CAA 90 bp | ACCCAGGCCAGGCTTGCTGCCCCCAGAATCTTGGTGCTTAAAGCGTTCAGAGACTACCTAGACTCCCAGTaGCAAGGCACATTAACAATG | + |
|
Preference number: 3 (lower is better) Translates to: TQARLAAPRILVLKAFRDYLDSQ*QGTLTM Trigger: CATTGTTAATGTGCCTTGCAACTGGGAGTCTAGGTA...GTCTCTGAACGCTTTAAGCACCAAGATTCTGGGGGCAGCAAGCCTGGCCTGGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
||
| 3UTR CCA 72 bp | ATGCTGCAGGTTCGCCTGAAAGGAGTCTTGAAAGTGTaGTCCATCCACACGGCTCAGCCAAAAAGCCAACTA | + |
|
Preference number: 3 (lower is better) Translates to: MLQVRLKGVLKV*SIHTAQPKSQL Trigger: TAGTTGGCTTTTTGGCTGAGCCGTGTGGATGGACCACACTTTCAAGACTCCTTTCAGGCGAACCTGCAGCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
||
| 3UTR TCA 72 bp | AAGCACTGGGGCTCTCTCACTGGGCAAGTGACAACCTaGGCCGCTCACAGGGAAAAGTGTACTTATTCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: KHWGSLTGQVTT*AAHREKCTYSK Trigger: TTTAGAATAAGTACACTTTTCCCTGTGAGCGGCTCAGGTTGTCACTTGCCCAGTGAGAGAGCCCCAGTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
||
| 3UTR GCA 72 bp | CCACACGGCTCAGCCAAAAAGCCAACTAAACAGAGCTaGTCCGGAGAACGATCACAGAAATCCCAACTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: PHGSAKKPTKQS*SGERSQKSQLS Trigger: AGAAAGTTGGGATTTCTGTGATCGTTCTCCGGAGCAGCTCTGTTTAGTTGGCTTTTTGGCTGAGCCGTGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
||
| 3UTR GCA 72 bp | AACCTACCCAGGTTAGCCCTTATTGTAAAACATAACTaGACACGGCGCTCTTTCCTCCCAGGAGTTGGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: NLPRLALIVKHN*TRRSFLPGVGL Trigger: AAGACCAACTCCTGGGAGGAAAGAGCGCCGTGTGCAGTTATGTTTTACAATAAGGGCTAACCTGGGTAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
||
| 3UTR-3UTR CAA 90 bp | GAAGTTCACTCCAAACCACACACTGAAGCAGGGTTTCATTCCAAGAATTACAAGCGCCTGAAAGGAGTCTaGAAAGTGTGGTCCATCCAC | + |
|
Preference number: 3 (lower is better) Translates to: EVHSKPHTEAGFHSKNYKRLKGV*KVWSIH Trigger: GTGGATGGACCACACTTTCAAGACTCCTTTCAGGCG...CTTGTAATTCTTGGAATGAAACCCTGCTTCAGTGTGTGGTTTGGAGTGAACTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR-3UTR CAA 90 bp | ACTGGACTCTTACCCTGTACAGCTATTGCAAAGGTCCCCACAGGCTGGACTCAAGAGTACATTTATTTCTaGTCAAATGCTGCAGGTTCG | + |
|
Preference number: 3 (lower is better) Translates to: TGLLPCTAIAKVPTGWTQEYIYF*SNAAGS Trigger: CGAACCTGCAGCATTTGACAAGAAATAAATGTACTC...TTGAGTCCAGCCTGTGGGGACCTTTGCAATAGCTGTACAGGGTAAGAGTCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
||
| 3UTR GCA 72 bp | CTGACTTGCTTGGCATACTTGAAGGGAAAATCGTGTTaGCAGATACTAAGCAAGAAAAGCAGCCAGGAGACT | + |
|
Preference number: 3 (lower is better) Translates to: LTCLAYLKGKSC*QILSKKSSQET Trigger: AGTCTCCTGGCTGCTTTTCTTGCTTAGTATCTGGCAACACGATTTTCCCTTCAAGTATGCCAAGCAAGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
||
| CDS-3UTR CCA 90 bp | GAGGGGACAGAAAATGCAATGCCTAGCAGGAAGGCAGAGGAACAGTTTAGGTATTCCTACGCGGGGCGGTaGCAGTGGCGGTGGCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EGTENAMPSRKAEEQFRYSYAGR*QWRWRP Trigger: TGGCCGCCACCGCCACTGCCACCGCCCCGCGTAGGA...ATACCTAAACTGTTCCTCTGCCTTCCTGCTAGGCATTGCATTTTCTGTCCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
||
| 3UTR CAA 72 bp | AGGCCCACCCAGGCCAGGCTTGCTGCCCCCAGAATCTaGGTGCTTAAAGCGTTCAGAGACAGACTCCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RPTQARLAAPRI*VLKAFRDRLQQ Trigger: TTGCTGGAGTCTGTCTCTGAACGCTTTAAGCACCAAGATTCTGGGGGCAGCAAGCCTGGCCTGGGTGGGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
||
| 3UTR CAA 72 bp | TTGTGGTTTCTGCACTATGTGCACCAGCTTGTGCATTaGTGCCTGTGTGGGGCAAGCCAGGAAGGGTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LWFLHYVHQLVH*CLCGASQEGSP Trigger: GGGGGACCCTTCCTGGCTTGCCCCACACAGGCACAAATGCACAAGCTGGTGCACATAGTGCAGAAACCACAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
||
| 3UTR CAA 72 bp | GCGGTCTCTTGTGGTTTCTGCACTATGTGCACCAGCTaGTGCATTTGTGCCTGTGTGGGGCAAGCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AVSCGFCTMCTS*CICACVGQARK Trigger: CTTCCTGGCTTGCCCCACACAGGCACAAATGCACAAGCTGGTGCACATAGTGCAGAAACCACAAGAGACCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
||
| 3UTR CAA 72 bp | GAAGTCCACCCACTGGACTCTTACCCTGTACAGCTATaGCAAAGGTCCCCACAGGCTGGACTCAAGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EVHPLDSYPVQL*QRSPQAGLKAA Trigger: AGCAGCCTTGAGTCCAGCCTGTGGGGACCTTTGCAATAGCTGTACAGGGTAAGAGTCCAGTGGGTGGACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR CAA 72 bp | TGGCACACAGCACACAGGGCTGGGGAAGCAAAGTACTaGCCGTATCAGCTTGGGAAGGAGGGTCAAGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: WHTAHRAGEAKY*PYQLGKEGQGK Trigger: TTTTCCTTGACCCTCCTTCCCAAGCTGATACGGCAAGTACTTTGCTTCCCCAGCCCTGTGTGCTGTGTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| CDS-3UTR GCA 90 bp | ACCCAGGCCAGGCTTGCTGCCCCCAGAATCTTGGTGCTTAAAGCGTTCAGAGACAGAGCGATTTCCTGCTaGATCTTGCTGACCATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TQARLAAPRILVLKAFRDRAISC*ILLTMS Trigger: AGACATGGTCAGCAAGATGCAGCAGGAAATCGCTCT...GTCTCTGAACGCTTTAAGCACCAAGATTCTGGGGGCAGCAAGCCTGGCCTGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
||
| CDS-3UTR TCA 90 bp | CAAGGATTCTTTAGACTTAAAGCTACCTTGTTTTCCACATGCCTTCCCACGCTCCCTCCAGCATCGTCTTaGGGCCAGCCACCTCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QGFFRLKATLFSTCLPTLPPASS*GQPPPS Trigger: AGACGGAGGTGGCTGGCCTCAAGACGATGCTGGAGG...GAGCGTGGGAAGGCATGTGGAAAACAAGGTAGCTTTAAGTCTAAAGAATCCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| CDS-3UTR GCA 90 bp | AAGGAGGGTCAAGGAAAATCGAGGGAAGATGGTACCAAGGCACAGCACAGGCCCATTGTATCAAGCTTGTaGGCCTCCAGCATCGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KEGQGKSREDGTKAQHRPIVSSL*ASSIVL Trigger: CAAGACGATGCTGGAGGCGCACAAGCTTGATACAAT...GGGCCTGTGCTGTGCCTTGGTACCATCTTCCCTCGATTTTCCTTGACCCTCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
||
| CDS-3UTR TCA 90 bp | GAAGGAGGGTCAAGGAAAATCGAGGGAAGATGGTACCAAGGCACAGCACAGGCCCCATGTCTTTGTAGATaGTGTTCATGTTGGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EGGSRKIEGRWYQGTAQAPCLCR*CSCWSL Trigger: CAGAGACCAACATGAACATCATCTACAAAGACATGG...GGCCTGTGCTGTGCCTTGGTACCATCTTCCCTCGATTTTCCTTGACCCTCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| 3UTR CAA 72 bp | TCTTGTCAAATGCTGCAGGTTCGCCTGAAAGGAGTCTaGAAAGTGTGGTCCATCCACACGGCTCAGCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SCQMLQVRLKGV*KVWSIHTAQPK Trigger: TTTTGGCTGAGCCGTGTGGATGGACCACACTTTCAAGACTCCTTTCAGGCGAACCTGCAGCATTTGACAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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| CDS-3UTR GCA 90 bp | TCCACCCACTGGACTCTTACCCTGTACAGCTATTGCAAAGGTCCCCACAGGCTGTCATCCATCACTTGTTaGTTTAACTGGTGCAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: STHWTLTLYSYCKGPHRLSSITC*FNWCSS Trigger: TGAACTGCACCAGTTAAAGCAACAAGTGATGGATGA...CAGCCTGTGGGGACCTTTGCAATAGCTGTACAGGGTAAGAGTCCAGTGGGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
||
| CDS-3UTR TCA 90 bp | AAGGAGGGTCAAGGAAAATCGAGGGAAGATGGTACCAAGGCACAGCACAGGCCCATGATTTCTGCTTGTTaGATGGTAAACCCATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KEGQGKSREDGTKAQHRPMISAC*MVNPFA Trigger: AGCAAATGGGTTTACCATTCAACAAGCAGAAATCAT...GGGCCTGTGCTGTGCCTTGGTACCATCTTCCCTCGATTTTCCTTGACCCTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
||
| CDS-3UTR TCA 90 bp | GAAGTTCACTCCAAACCACACACTGAAGCAGGGTTTCATTCCAAGAATTACAAGATCTTCCGGTCTGTCTaGGTCAGGGCTCTGTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: EVHSKPHTEAGFHSKNYKIFRSV*VRALSC Trigger: GCAAGACAGAGCCCTGACTCAGACAGACCGGAAGAT...CTTGTAATTCTTGGAATGAAACCCTGCTTCAGTGTGTGGTTTGGAGTGAACTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
||
| 3UTR CAA 72 bp | ACTGACTTGCTTGGCATACTTGAAGGGAAAATCGTGTaGCCAGATACTAAGCAAGAAAAGCAGCCAGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TDLLGILEGKIV*PDTKQEKQPGD Trigger: GTCTCCTGGCTGCTTTTCTTGCTTAGTATCTGGCAACACGATTTTCCCTTCAAGTATGCCAAGCAAGTCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
||
| CDS TCA 90 bp | TGCCGGCTCACAGAGAGGGGCAAGTTCTCTTTTCTGTGCTCCAGCTaGTGGCACTTAGCAGACAGGCTGAGCTCTCTCCGGCTGCTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: CRLTERGKFSFLCSS*WHLADRLSSLRLLA Trigger: TGCGAGCAGCCGGAGAGAGCTCAGCCTGTCTGCTAAGTGCCATCAGCTGGAGCACAGAAAAGAGAACTTGCCCCTCTCTGTGAGCCGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
||
| CDS-3UTR CAA 90 bp | AGCCAGAGGGAGCTTTGTGCTGCCGTGCTAATGCTTGTAATCCCAGCACTTGGGAGTCAGGGCTCTGTCTaGCTGGGCATGCAGCGACAC | + |
|
Preference number: 5 (lower is better) Translates to: SQRELCAAVLMLVIPALGSQGSV*LGMQRH Trigger: GTGTCGCTGCATGCCCAGCAAGACAGAGCCCTGACT...CCCAAGTGCTGGGATTACAAGCATTAGCACGGCAGCACAAAGCTCCCTCTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
||
| CDS-3UTR CAA 90 bp | ACTGGACTCTTACCCTGTACAGCTATTGCAAAGGTCCCCACAGGCTGGACTCAATTGGTCTCTGTGATCTaGACCAGTGCAGACACAATG | + |
|
Preference number: 5 (lower is better) Translates to: TGLLPCTAIAKVPTGWTQLVSVI*TSADTM Trigger: CATTGTGTCTGCACTGGTCAAGATCACAGAGACCAA...TTGAGTCCAGCCTGTGGGGACCTTTGCAATAGCTGTACAGGGTAAGAGTCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
||
| CDS-3UTR CAA 90 bp | ACTGGACTCTTACCCTGTACAGCTATTGCAAAGGTCCCCACAGGCTGGACTCAAAGATTGAAGTTTAATTaGGTATCTGTCCGGACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TGLLPCTAIAKVPTGWTQRLKFN*VSVRTL Trigger: CAAAGTCCGGACAGATACCAAATTAAACTTCAATCT...TTGAGTCCAGCCTGTGGGGACCTTTGCAATAGCTGTACAGGGTAAGAGTCCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
||
| CDS-3UTR CAA 90 bp | TCTTTAGACTTAAAGCTACCTTGTTTTCCACATGCCTTCCCACGCTCTCCACCTGACCCCGCTAAGTATTaGATTGTATCAAGCTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SLDLKLPCFPHAFPRSPPDPAKY*IVSSLC Trigger: GCACAAGCTTGATACAATCAAATACTTAGCGGGGTC...AGGTGGAGAGCGTGGGAAGGCATGTGGAAAACAAGGTAGCTTTAAGTCTAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
||
| CDS GCA 72 bp | CGCAGCCGGAGGACGGGAGCCGCTGGCGACTCGGTGTaGGCCTCGGCCGCTCGGCCGCCACGGAGCCGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RSRRTGAAGDSV*ASAARPPRSRC Trigger: ACAGCGGCTCCGTGGCGGCCGAGCGGCCGAGGCGCACACCGAGTCGCCAGCGGCTCCCGTCCTCCGGCTGCG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
||
| CDS CAA 72 bp | AACACAGACCCCGCTAAGTATTTGATTGTATCAAGCTaGTGCGCCTCCAGCATCGTCTTGAGGCCAGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: NTDPAKYLIVSS*CASSIVLRPAT Trigger: GGTGGCTGGCCTCAAGACGATGCTGGAGGCGCACAAGCTTGATACAATCAAATACTTAGCGGGGTCTGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021800.6 |
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