Pregenerated sensors for MCTS1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000000355

Ensembl transcript IDs: ENSMUST00000000365.3

Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS-3UTR GCA 90 bp	AGACACAGATACAGCACAGTATCCATAGTTAGCCCATGCACATTCCTTTTGAGGATGTTGTTTTCCTTCTaGCATGATTGCAACAATAGT	+
Preference number: 4 (lower is better) Translates to: RHRYSTVSIVSPCTFLLRMLFSF*HDCNNS Trigger: ACTATTGTTGCAATCATGGCAGAAGGAAAACAACAT...CCTCAAAAGGAATGTGCATGGGCTAACTATGGATACTGTGCTGTATCTGTGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000365.3
CDS-3UTR CAA 90 bp	GGAATTTTTATTCAGCATAATCATAGAGGCTTTGTCTTCATGCTGTCACACAGAGAAGTAATCTTAAAGTaGGATAAAAAGGCCCTTCTC	+
Preference number: 5 (lower is better) Translates to: GIFIQHNHRGFVFMLSHREVILK*DKKALL Trigger: GAGAAGGGCCTTTTTATCCAACTTTAAGATTACTTC...TCTGTGTGACAGCATGAAGACAAAGCCTCTATGATTATGCTGAATAAAAATTCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000365.3

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