Pregenerated sensors for MCTP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032776Ensembl transcript IDs: ENSMUST00000079323.8, ENSMUST00000205410.2, ENSMUST00000206466.2
Found 191 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGGATACCCGTGCACAGGGACCTGTGTGCAGGTGTGCTTGCATCTaGGTATGTAAAGAAAGCAGAGAGGGAGTAGAAGGTTGCACACAA | + |
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Preference number: 1 (lower is better) Translates to: QDTRAQGPVCRCACI*VCKESREGVEGCTQ Trigger: TTGTGTGCAACCTTCTACTCCCTCTCTGCTTTCTTTACATACCCAGATGCAAGCACACCTGCACACAGGTCCCTGTGCACGGGTATCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079323.8 ENSMUST00000206466.2 |
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| 3UTR TCA 90 bp | TTTCCTGGCTGTCCTGGGTGCTGCTGGCTTTCCCTTTCATGGGTCTaGGGAAGTTGTACAGAAAGAGTAGCAACAATGCCAGAGGGATCA | + |
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Preference number: 1 (lower is better) Translates to: FPGCPGCCWLSLSWV*GSCTERVATMPEGS Trigger: TGATCCCTCTGGCATTGTTGCTACTCTTTCTGTACAACTTCCTCAGACCCATGAAAGGGAAAGCCAGCAGCACCCAGGACAGCCAGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205410.2 |
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| 3UTR CCA 90 bp | TGCAGGCAAAGGAGAAATTACTTGGTCCTTTCATTGTGGGACTTCTaGGTTGGCCCATATCTGAAGGAACAGGTGAATTTCTTGGTACCT | + |
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Preference number: 1 (lower is better) Translates to: CRQRRNYLVLSLWDF*VGPYLKEQVNFLVP Trigger: AGGTACCAAGAAATTCACCTGTTCCTTCAGATATGGGCCAACCCAGAAGTCCCACAATGAAAGGACCAAGTAATTTCTCCTTTGCCTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| 3UTR TCA 90 bp | ACTATCACAAAAACCCTTATTCTTCCAATGGGTGATTCTAATGAGTaGCTCCTTGGAACCGTCAAGGATGGCCCTTGCCAACAACAACTG | + |
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Preference number: 1 (lower is better) Translates to: TITKTLILPMGDSNE*LLGTVKDGPCQQQL Trigger: CAGTTGTTGTTGGCAAGGGCCATCCTTGACGGTTCCAAGGAGTCACTCATTAGAATCACCCATTGGAAGAATAAGGGTTTTTGTGATAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| 3UTR CCA 90 bp | GCAAAGGAGAAATTACTTGGTCCTTTCATTGTGGGACTTCTGGGTTaGCCCATATCTGAAGGAACAGGTGAATTTCTTGGTACCTTGCTA | + |
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Preference number: 1 (lower is better) Translates to: AKEKLLGPFIVGLLG*PISEGTGEFLGTLL Trigger: TAGCAAGGTACCAAGAAATTCACCTGTTCCTTCAGATATGGGCCAACCCAGAAGTCCCACAATGAAAGGACCAAGTAATTTCTCCTTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| 3UTR TCA 90 bp | TGCTCTCAAATACCAGCTGGCATTTGTGTCCTGAATGTAATGCTGTaGGTTCTATTGGGGCTATGGAGGAAAGAAGTCTCACTAATGATA | + |
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Preference number: 1 (lower is better) Translates to: CSQIPAGICVLNVML*VLLGLWRKEVSLMI Trigger: TATCATTAGTGAGACTTCTTTCCTCCATAGCCCCAATAGAACTCACAGCATTACATTCAGGACACAAATGCCAGCTGGTATTTGAGAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| 3UTR CCA 90 bp | GAGAGAAGTTCTGCCCACAGCACCATGACAGGTGCTTCTTTAAGGTaGAATAAGGTATTAGATTATACTATTTGTCACTCTCTGAGATCC | + |
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Preference number: 1 (lower is better) Translates to: ERSSAHSTMTGASLR*NKVLDYTICHSLRS Trigger: GGATCTCAGAGAGTGACAAATAGTATAATCTAATACCTTATTCCACCTTAAAGAAGCACCTGTCATGGTGCTGTGGGCAGAACTTCTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| 3UTR CCA 90 bp | TTATTCTATTGCAGGCAAAGGAGAAATTACTTGGTCCTTTCATTGTaGGACTTCTGGGTTGGCCCATATCTGAAGGAACAGGTGAATTTC | + |
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Preference number: 1 (lower is better) Translates to: LFYCRQRRNYLVLSL*DFWVGPYLKEQVNF Trigger: GAAATTCACCTGTTCCTTCAGATATGGGCCAACCCAGAAGTCCCACAATGAAAGGACCAAGTAATTTCTCCTTTGCCTGCAATAGAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| 3UTR CCA 90 bp | TATTCCAGAAACATAATACTATCACAAAAACCCTTATTCTTCCAATaGGTGATTCTAATGAGTGACTCCTTGGAACCGTCAAGGATGGCC | + |
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Preference number: 1 (lower is better) Translates to: YSRNIILSQKPLFFQ*VILMSDSLEPSRMA Trigger: GGCCATCCTTGACGGTTCCAAGGAGTCACTCATTAGAATCACCCATTGGAAGAATAAGGGTTTTTGTGATAGTATTATGTTTCTGGAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| 3UTR CCA 90 bp | AGTGAGTTTCTATACAGAGTAAATCATGCCAGTCACAAAAGCAGGTaGAAGTTATTCTATTGCAGGCAAAGGAGAAATTACTTGGTCCTT | + |
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Preference number: 1 (lower is better) Translates to: SEFLYRVNHASHKSR*KLFYCRQRRNYLVL Trigger: AAGGACCAAGTAATTTCTCCTTTGCCTGCAATAGAATAACTTCCACCTGCTTTTGTGACTGGCATGATTTACTCTGTATAGAAACTCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| 3UTR TCA 90 bp | AATGTTGATTTCATCAACTACCAATTGTCTTCAGTTAAAGAGTGTTaGAAAAGTTGGCCCTGTCTTGCTCTCAAATACCAGCTGGCATTT | + |
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Preference number: 1 (lower is better) Translates to: NVDFINYQLSSVKEC*KSWPCLALKYQLAF Trigger: AAATGCCAGCTGGTATTTGAGAGCAAGACAGGGCCAACTTTTTCAACACTCTTTAACTGAAGACAATTGGTAGTTGATGAAATCAACATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| 3UTR CCA 90 bp | AGGAACAAGACAATGAGGTATTGTTTACACAGAAGATTGAGTAACTaGTTAGACAAAGAGGTTCTCGGGTATCTATTGTATGTACAACTA | + |
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Preference number: 1 (lower is better) Translates to: RNKTMRYCLHRRLSN*LDKEVLGYLLYVQL Trigger: TAGTTGTACATACAATAGATACCCGAGAACCTCTTTGTCTAACCAGTTACTCAATCTTCTGTGTAAACAATACCTCATTGTCTTGTTCCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| 3UTR-3UTR GCA 90 bp | TCCAGATGTTTGTGTAAGGAATCTTGGGTCACTAGGGAACCAGGCCCCAAACACGCACAGGGACCTGTGTaGAGGTGTGCTTGCATCTGG | + |
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Preference number: 2 (lower is better) Translates to: SRCLCKESWVTREPGPKHAQGPV*RCACIW Trigger: CCAGATGCAAGCACACCTGCACACAGGTCCCTGTGC...GTGTTTGGGGCCTGGTTCCCTAGTGACCCAAGATTCCTTACACAAACATCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| 3UTR-3UTR TCA 90 bp | GCCCCATGCATACAAGGAGAGAAGTTCTGCCCACAGCACCATGACAGGTGCTTCGGTGATTCTAATGAGTaGCTCCTTGGAACCGTCAAG | + |
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Preference number: 2 (lower is better) Translates to: APCIQGEKFCPQHHDRCFGDSNE*LLGTVK Trigger: CTTGACGGTTCCAAGGAGTCACTCATTAGAATCACC...GAAGCACCTGTCATGGTGCTGTGGGCAGAACTTCTCTCCTTGTATGCATGGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| 3UTR-3UTR GCA 90 bp | GCTCCCACAGTCTCAGACTTGATGTCTTTTGATGGTTTGGTTGTCCAGGAATCCTGGCTGCACACTGGATaGTGGAGGCCTCAGTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: APTVSDLMSFDGLVVQESWLHTG*WRPQSV Trigger: CACAGACTGAGGCCTCCAGCATCCAGTGTGCAGCCA...GGATTCCTGGACAACCAAACCATCAAAAGACATCAAGTCTGAGACTGTGGGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCCATGCATACAAGGAGAGAAGTTCTGCCCACAGCACCATGACAGGTGCTTCACCACCAGCCTCAACTaGAAAGAACTGATTCTTAGT | + |
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Preference number: 2 (lower is better) Translates to: APCIQGEKFCPQHHDRCFTTSLN*KELILS Trigger: ACTAAGAATCAGTTCTTTCCAGTTGAGGCTGGTGGT...GAAGCACCTGTCATGGTGCTGTGGGCAGAACTTCTCTCCTTGTATGCATGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| 3UTR-3UTR GCA 90 bp | AAATCTGTCGAAGGTATTGAAATAAGTTCCGCATCATCCTGGAATCAAGTGGTCGCACAGGGACCTGTGTaGAGGTGTGCTTGCATCTGG | + |
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Preference number: 2 (lower is better) Translates to: KSVEGIEISSASSWNQVVAQGPV*RCACIW Trigger: CCAGATGCAAGCACACCTGCACACAGGTCCCTGTGC...GACCACTTGATTCCAGGATGATGCGGAACTTATTTCAATACCTTCGACAGATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079323.8 ENSMUST00000206466.2 |
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| 3UTR CAA 90 bp | GTCTTCTGGCTGTCCTCGAGGATGGTGTTCAGACATGTGGACACCTaGTTTTATGTCCTAAAAATGGATATGAAGCTCCCACAGTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: VFWLSSRMVFRHVDT*FYVLKMDMKLPQSQ Trigger: CTGAGACTGTGGGAGCTTCATATCCATTTTTAGGACATAAAACAAGGTGTCCACATGTCTGAACACCATCCTCGAGGACAGCCAGAAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079323.8 ENSMUST00000206466.2 |
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| 3UTR-3UTR GCA 90 bp | GCTGTCCTCGAGGATGGTGTTCAGACATGTGGACACCTTGTTTTATGTCCTAAAGTGTGCAGGTGTGCTTaGATCTGGGTATGTAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: AVLEDGVQTCGHLVLCPKVCRCA*IWVCKE Trigger: TTCTTTACATACCCAGATGCAAGCACACCTGCACAC...TTTAGGACATAAAACAAGGTGTCCACATGTCTGAACACCATCCTCGAGGACAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079323.8 ENSMUST00000206466.2 |
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| 3UTR-3UTR CCA 90 bp | AAATTCATGCTAGTTCTGGCCCCATGCATACAAGGAGAGAAGTTCTGCCCACAGAAACACATAGGGGGATaGAGACTGGAAATAACTGAA | + |
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Preference number: 2 (lower is better) Translates to: KFMLVLAPCIQGEKFCPQKHIGG*RLEITE Trigger: TTCAGTTATTTCCAGTCTCCATCCCCCTATGTGTTT...CTGTGGGCAGAACTTCTCTCCTTGTATGCATGGGGCCAGAACTAGCATGAATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| 3UTR CAA 90 bp | AAAAGCAGGTGGAAGTTATTCTATTGCAGGCAAAGGAGAAATTACTaGGTCCTTTCATTGTGGGACTTCTGGGTTGGCCCATATCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: KSRWKLFYCRQRRNY*VLSLWDFWVGPYLK Trigger: CTTCAGATATGGGCCAACCCAGAAGTCCCACAATGAAAGGACCAAGTAATTTCTCCTTTGCCTGCAATAGAATAACTTCCACCTGCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| 3UTR CAA 90 bp | AAGTTATTCTATTGCAGGCAAAGGAGAAATTACTTGGTCCTTTCATaGTGGGACTTCTGGGTTGGCCCATATCTGAAGGAACAGGTGAAT | + |
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Preference number: 2 (lower is better) Translates to: KLFYCRQRRNYLVLS*WDFWVGPYLKEQVN Trigger: ATTCACCTGTTCCTTCAGATATGGGCCAACCCAGAAGTCCCACAATGAAAGGACCAAGTAATTTCTCCTTTGCCTGCAATAGAATAACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| 3UTR CAA 90 bp | ACCAATTGTCTTCAGTTAAAGAGTGTTGAAAAAGTTGGCCCTGTCTaGCTCTCAAATACCAGCTGGCATTTGTGTCCTGAATGTAATGCT | + |
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Preference number: 2 (lower is better) Translates to: TNCLQLKSVEKVGPV*LSNTSWHLCPECNA Trigger: AGCATTACATTCAGGACACAAATGCCAGCTGGTATTTGAGAGCAAGACAGGGCCAACTTTTTCAACACTCTTTAACTGAAGACAATTGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| 3UTR-3UTR GCA 90 bp | GATGGTGTTCAGACATGTGGACACCTTGTTTTATGTCCTAAAAATGGATATGAAGTGTGCAGGTGTGCTTaGATCTGGGTATGTAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: DGVQTCGHLVLCPKNGYEVCRCA*IWVCKE Trigger: TTCTTTACATACCCAGATGCAAGCACACCTGCACAC...TTCATATCCATTTTTAGGACATAAAACAAGGTGTCCACATGTCTGAACACCATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079323.8 ENSMUST00000206466.2 |
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| 3UTR CAA 90 bp | CTGGATGACAGGAACAAGACAATGAGGTATTGTTTACACAGAAGATaGAGTAACTGGTTAGACAAAGAGGTTCTCGGGTATCTATTGTAT | + |
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Preference number: 2 (lower is better) Translates to: LDDRNKTMRYCLHRR*SNWLDKEVLGYLLY Trigger: ATACAATAGATACCCGAGAACCTCTTTGTCTAACCAGTTACTCAATCTTCTGTGTAAACAATACCTCATTGTCTTGTTCCTGTCATCCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| 3UTR-3UTR CCA 90 bp | GAACTGATTCTTAGTGGAAAATCTGTCGAAGGTATTGAAATAAGTTCCGCATCATGGTGTTCAGACATGTaGACACCTTGTTTTATGTCC | + |
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Preference number: 2 (lower is better) Translates to: ELILSGKSVEGIEISSASWCSDM*TPCFMS Trigger: GGACATAAAACAAGGTGTCCACATGTCTGAACACCA...TGATGCGGAACTTATTTCAATACCTTCGACAGATTTTCCACTAAGAATCAGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| 3UTR CAA 90 bp | AGAAGATTGAGTAACTGGTTAGACAAAGAGGTTCTCGGGTATCTATaGTATGTACAACTAACAGATTTACTGGGGCTTTTAGAATCTCGT | + |
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Preference number: 2 (lower is better) Translates to: RRLSNWLDKEVLGYL*YVQLTDLLGLLESR Trigger: ACGAGATTCTAAAAGCCCCAGTAAATCTGTTAGTTGTACATACAATAGATACCCGAGAACCTCTTTGTCTAACCAGTTACTCAATCTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| 3UTR GCA 72 bp | CTAGTTCTGGCCCCATGCATACAAGGAGAGAAGTTCTaGCCACAGCACCATGACAGGTGCTTCTTTAAGGTG | + |
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Preference number: 3 (lower is better) Translates to: LVLAPCIQGEKF*PQHHDRCFFKV Trigger: CACCTTAAAGAAGCACCTGTCATGGTGCTGTGGGCAGAACTTCTCTCCTTGTATGCATGGGGCCAGAACTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| 3UTR-3UTR CAA 90 bp | AGATTTACTGGGGCTTTTAGAATCTCGTCAAGGCTCCTTTCCAGCCAGCTTCATGTTTCTGAGCTGGCCTaGAGCTTGAACTGTCCTGCC | + |
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Preference number: 3 (lower is better) Translates to: RFTGAFRISSRLLSSQLHVSELA*SLNCPA Trigger: GGCAGGACAGTTCAAGCTCAAGGCCAGCTCAGAAAC...ATGAAGCTGGCTGGAAAGGAGCCTTGACGAGATTCTAAAAGCCCCAGTAAATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| 3UTR TCA 72 bp | TGTCCTGGGTGCTGCTGGCTTTCCCTTTCATGGGTCTaGGGAAGTTGTACAGAAAGAGTAGCAACAATGCCA | + |
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Preference number: 3 (lower is better) Translates to: CPGCCWLSLSWV*GSCTERVATMP Trigger: TGGCATTGTTGCTACTCTTTCTGTACAACTTCCTCAGACCCATGAAAGGGAAAGCCAGCAGCACCCAGGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205410.2 |
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| 3UTR-3UTR CAA 90 bp | AGGGTGTGCTGTGGAGTTGTAGGGTACTCAGGATTCAAACACTATCTACAGAGGCCCACAGTCTCAGACTaGATGTCTTTTGATGGTTTG | + |
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Preference number: 3 (lower is better) Translates to: RVCCGVVGYSGFKHYLQRPTVSD*MSFDGL Trigger: CAAACCATCAAAAGACATCAAGTCTGAGACTGTGGG...CCTCTGTAGATAGTGTTTGAATCCTGAGTACCCTACAACTCCACAGCACACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| 3UTR TCA 72 bp | CCTGCCTTGGCCTCTTCCCTGTTAGGATTATATGTGTaGACCACCAGCCTCAACTGGAAAGAACTGATTCTT | + |
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Preference number: 3 (lower is better) Translates to: PALASSLLGLYV*TTSLNWKELIL Trigger: AAGAATCAGTTCTTTCCAGTTGAGGCTGGTGGTTCACACATATAATCCTAACAGGGAAGAGGCCAAGGCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| 3UTR CCA 72 bp | TCTGTCGAAGGTATTGAAATAAGTTCCGCATCATCCTaGAATCAAGTGGTCTTCTGGCTGTCCTCGAGGATG | + |
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Preference number: 3 (lower is better) Translates to: SVEGIEISSASS*NQVVFWLSSRM Trigger: CATCCTCGAGGACAGCCAGAAGACCACTTGATTCCAGGATGATGCGGAACTTATTTCAATACCTTCGACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079323.8 ENSMUST00000206466.2 |
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| 3UTR TCA 72 bp | CTCGTCAAGGCTCCTTTCCAGCCAGCTTCATTAACTTaGAGTAAATCAAATCGTGCAGAAATCGGGCTATGC | + |
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Preference number: 3 (lower is better) Translates to: LVKAPFQPASLT*SKSNRAEIGLC Trigger: GCATAGCCCGATTTCTGCACGATTTGATTTACTTCAAGTTAATGAAGCTGGCTGGAAAGGAGCCTTGACGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| 3UTR GCA 72 bp | AGAAGGAAAAAGAAATTCATGCTAGTTCTGGCCCCATaGATACAAGGAGAGAAGTTCTGCCCACAGCACCAT | + |
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Preference number: 3 (lower is better) Translates to: RRKKKFMLVLAP*IQGEKFCPQHH Trigger: ATGGTGCTGTGGGCAGAACTTCTCTCCTTGTATGCATGGGGCCAGAACTAGCATGAATTTCTTTTTCCTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| 3UTR TCA 72 bp | CGTCAAGGATGGCCCTTGCCAACAACAACTGAGATTTaGTTTGAACTGGCATCTAATACTAAAGGGTCACCA | + |
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Preference number: 3 (lower is better) Translates to: RQGWPLPTTTEI*FELASNTKGSP Trigger: TGGTGACCCTTTAGTATTAGATGCCAGTTCAAATCAAATCTCAGTTGTTGTTGGCAAGGGCCATCCTTGACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| 3UTR CCA 72 bp | GAAAAAGTTGGCCCTGTCTTGCTCTCAAATACCAGCTaGCATTTGTGTCCTGAATGTAATGCTGTGAGTTCT | + |
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Preference number: 3 (lower is better) Translates to: EKVGPVLLSNTS*HLCPECNAVSS Trigger: AGAACTCACAGCATTACATTCAGGACACAAATGCCAGCTGGTATTTGAGAGCAAGACAGGGCCAACTTTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| 3UTR TCA 72 bp | CCACTAATTCATCTGCCCCAATCTCCACCATCGCTCTaGGGATGCATATCAACATCTCATTGTAGTAATAAG | + |
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Preference number: 3 (lower is better) Translates to: PLIHLPQSPPSL*GCISTSHCSNK Trigger: CTTATTACTACAATGAGATGTTGATATGCATCCTCAGAGCGATGGTGGAGATTGGGGCAGATGAATTAGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| 3UTR-3UTR CAA 90 bp | ACTAACAGATTTACTGGGGCTTTTAGAATCTCGTCAAGGCTCCTTTCCAGCCAGAGACATGTGGACACCTaGTTTTATGTCCTAAAAATG | + |
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Preference number: 3 (lower is better) Translates to: TNRFTGAFRISSRLLSSQRHVDT*FYVLKM Trigger: CATTTTTAGGACATAAAACAAGGTGTCCACATGTCT...CTGGCTGGAAAGGAGCCTTGACGAGATTCTAAAAGCCCCAGTAAATCTGTTAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| 3UTR TCA 72 bp | CTAAAAATGGATATGAAGCTCCCACAGTCTCAGACTTaGTGTCTTTTGATGGTTTGGTTGTCCAGGAATCCA | + |
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Preference number: 3 (lower is better) Translates to: LKMDMKLPQSQT*CLLMVWLSRNP Trigger: TGGATTCCTGGACAACCAAACCATCAAAAGACATCAAGTCTGAGACTGTGGGAGCTTCATATCCATTTTTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079323.8 ENSMUST00000206466.2 |
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| 3UTR CCA 72 bp | AAGGGGTTATTTGGCTCCCAAAAGTTTCCATTCCAATaGCTGATCATATCTCACATGACGGCTTATAGATGT | + |
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Preference number: 3 (lower is better) Translates to: KGLFGSQKFPFQ*LIISHMTAYRC Trigger: ACATCTATAAGCCGTCATGTGAGATATGATCAGCCATTGGAATGGAAACTTTTGGGAGCCAAATAACCCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| 3UTR CCA 72 bp | TCTGCCCACAGCACCATGACAGGTGCTTCTTTAAGGTaGAATAAGGTATTAGATTATACTATTTGTCACTCT | + |
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Preference number: 3 (lower is better) Translates to: SAHSTMTGASLR*NKVLDYTICHS Trigger: AGAGTGACAAATAGTATAATCTAATACCTTATTCCACCTTAAAGAAGCACCTGTCATGGTGCTGTGGGCAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| 3UTR CCA 72 bp | ATAGAGGGAAAAAGGAACATTAAACACATAGGGGGATaGAGACTGGAAATAACTGAACCTCTGTTGATTGTT | + |
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Preference number: 3 (lower is better) Translates to: IEGKRNIKHIGG*RLEITEPLLIV Trigger: AACAATCAACAGAGGTTCAGTTATTTCCAGTCTCCATCCCCCTATGTGTTTAATGTTCCTTTTTCCCTCTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| 3UTR CCA 72 bp | CTATACAGAGTAAATCATGCCAGTCACAAAAGCAGGTaGAAGTTATTCTATTGCAGGCAAAGGAGAAATTAC | + |
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Preference number: 3 (lower is better) Translates to: LYRVNHASHKSR*KLFYCRQRRNY Trigger: GTAATTTCTCCTTTGCCTGCAATAGAATAACTTCCACCTGCTTTTGTGACTGGCATGATTTACTCTGTATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| 3UTR CCA 72 bp | ACAATGAGGTATTGTTTACACAGAAGATTGAGTAACTaGTTAGACAAAGAGGTTCTCGGGTATCTATTGTAT | + |
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Preference number: 3 (lower is better) Translates to: TMRYCLHRRLSN*LDKEVLGYLLY Trigger: ATACAATAGATACCCGAGAACCTCTTTGTCTAACCAGTTACTCAATCTTCTGTGTAAACAATACCTCATTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| 3UTR CCA 72 bp | TTTTTCAAAGCATACAAATTGTCATGCTGGCATATCTaGACATGCCAAAGGACTGCTTTCTATAACTGTAAA | + |
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Preference number: 3 (lower is better) Translates to: FFKAYKLSCWHI*TCQRTAFYNCK Trigger: TTTACAGTTATAGAAAGCAGTCCTTTGGCATGTCCAGATATGCCAGCATGACAATTTGTATGCTTTGAAAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| CDS-3UTR GCA 90 bp | ATACCCGTGCACAGGGACCTGTGTGCAGGTGTGCTTGCATCTGGGTATGTAAAGCCCGGACCACGAGGTTaGGGCCTTCCTTCAGGTGTA | + |
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Preference number: 4 (lower is better) Translates to: IPVHRDLCAGVLASGYVKPGPRG*GLPSGV Trigger: TACACCTGAAGGAAGGCCGCAACCTCGTGGTCCGGG...CTTTACATACCCAGATGCAAGCACACCTGCACACAGGTCCCTGTGCACGGGTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| CDS-3UTR GCA 90 bp | ATACCCGTGCACAGGGACCTGTGTGCAGGTGTGCTTGCATCTGGGTATGTAAAGCCTCCTCTACGTCTGTaGTTTCCTGGCTGTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IPVHRDLCAGVLASGYVKPPLRL*FPGCPG Trigger: CCCAGGACAGCCAGGAAAGCACAGACGTAGAGGAGG...CTTTACATACCCAGATGCAAGCACACCTGCACACAGGTCCCTGTGCACGGGTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR CCA 90 bp | ATACCCGTGCACAGGGACCTGTGTGCAGGTGTGCTTGCATCTGGGTATGTAAAGGGTACGCGAAGGGGCTaGGGAGGTGACTCACACAAT | + |
|
Preference number: 4 (lower is better) Translates to: IPVHRDLCAGVLASGYVKGTRRG*GGDSHN Trigger: ATTGTGTGAGTCACCTCCCCAGCCCCTTCGCGTACC...CTTTACATACCCAGATGCAAGCACACCTGCACACAGGTCCCTGTGCACGGGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR GCA 90 bp | AGGATACCCGTGCACAGGGACCTGTGTGCAGGTGTGCTTGCATCTGGGTATGTAACTGCTTCAGTGAGCTaGTGCTGCTCTTCGGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: RIPVHRDLCAGVLASGYVTASVS*CCSSGQ Trigger: TTGTCCCGAAGAGCAGCAGCAGCTCACTGAAGCAGT...TACATACCCAGATGCAAGCACACCTGCACACAGGTCCCTGTGCACGGGTATCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR GCA 90 bp | AGGATACCCGTGCACAGGGACCTGTGTGCAGGTGTGCTTGCATCTGGGTATGTATGGCTGCACACTGGATaGTGGAGGCAGTGGAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: RIPVHRDLCAGVLASGYVWLHTG*WRQWKQ Trigger: TTGTTTCCACTGCCTCCAGCATCCAGTGTGCAGCCA...TACATACCCAGATGCAAGCACACCTGCACACAGGTCCCTGTGCACGGGTATCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206466.2 |
||
| 3UTR CAA 72 bp | GGCCAACATAGCACAGTTTCTGAGCTGGCCTTGAGCTaGAACTGTCCTGCCTTGGCCTCTTCCCTGTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GQHSTVSELALS*NCPALASSLLG Trigger: TCCTAACAGGGAAGAGGCCAAGGCAGGACAGTTCAAGCTCAAGGCCAGCTCAGAAACTGTGCTATGTTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR TCA 90 bp | GCTCCCACAGTCTCAGACTTGATGTCTTTTGATGGTTTGGTTGTCCAGGAATCCCTCAGACTGCTTCAGTaGGCTGCTGCTGCTCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: APTVSDLMSFDGLVVQESLRLLQ*AAAALR Trigger: CCGAAGAGCAGCAGCAGCTCACTGAAGCAGTCTGAG...GGATTCCTGGACAACCAAACCATCAAAAGACATCAAGTCTGAGACTGTGGGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGATGTTTGTGTAAGGAATCTTGGGTCACTAGGGAACCAGGCCCCAAACACGGACAATGCCTGCAGTaGACAGGCTGTTGGGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: SRCLCKESWVTREPGPKHGQCLQ*TGCWVL Trigger: CAGTACCCAACAGCCTGTCCACTGCAGGCATTGTCC...GTGTTTGGGGCCTGGTTCCCTAGTGACCCAAGATTCCTTACACAAACATCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR CCA 90 bp | GCCCCATGCATACAAGGAGAGAAGTTCTGCCCACAGCACCATGACAGGTGCTTCTCCTTCAGAGAGTTCTaGAAGGCATATCGCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: APCIQGEKFCPQHHDRCFSFREF*KAYRWE Trigger: TTCCCAGCGATATGCCTTCCAGAACTCTCTGAAGGA...GAAGCACCTGTCATGGTGCTGTGGGCAGAACTTCTCTCCTTGTATGCATGGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR TCA 90 bp | AAAGAAAGCAGAGAGGGAGTAGAAGGTTGCACACAACATCCATATCTCAGGACACCAGGGCACTCTGGCTaGATGCCTGCCACTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KESREGVEGCTQHPYLRTPGHSG*MPATLL Trigger: CAGAAGAGTGGCAGGCATTCAGCCAGAGTGCCCTGG...TGTCCTGAGATATGGATGTTGTGTGCAACCTTCTACTCCCTCTCTGCTTTCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR TCA 90 bp | AAAGAAAGCAGAGAGGGAGTAGAAGGTTGCACACAACATCCATATCTCAGGACACCTTCAGGTGTATGGTaGGGAGGTACGCGAAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KESREGVEGCTQHPYLRTPSGVW*GGTRRG Trigger: GCCCCTTCGCGTACCTCCTCACCATACACCTGAAGG...TGTCCTGAGATATGGATGTTGTGTGCAACCTTCTACTCCCTCTCTGCTTTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR TCA 90 bp | GCCCCATGCATACAAGGAGAGAAGTTCTGCCCACAGCACCATGACAGGTGCTTCTCCCTTTCATGGGTCTaGGGAAGTTGTACAGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: APCIQGEKFCPQHHDRCFSLSWV*GSCTER Trigger: TCTTTCTGTACAACTTCCTCAGACCCATGAAAGGGA...GAAGCACCTGTCATGGTGCTGTGGGCAGAACTTCTCTCCTTGTATGCATGGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR GCA 90 bp | GCCCCATGCATACAAGGAGAGAAGTTCTGCCCACAGCACCATGACAGGTGCTTCACAGAGCTTCAGCTCTaGATACTGCACCTTCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: APCIQGEKFCPQHHDRCFTELQL*ILHLLN Trigger: ATTCAGAAGGTGCAGTATGCAGAGCTGAAGCTCTGT...GAAGCACCTGTCATGGTGCTGTGGGCAGAACTTCTCTCCTTGTATGCATGGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR CCA 90 bp | AGATTTACTGGGGCTTTTAGAATCTCGTCAAGGCTCCTTTCCAGCCAGCTTCATACGTCTGTGCTTTCCTaGCTGTCCTGGGTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RFTGAFRISSRLLSSQLHTSVLS*LSWVLL Trigger: CAGCAGCACCCAGGACAGCCAGGAAAGCACAGACGT...ATGAAGCTGGCTGGAAAGGAGCCTTGACGAGATTCTAAAAGCCCCAGTAAATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR CCA 90 bp | GACCTGTGTGCAGGTGTGCTTGCATCTGGGTATGTAAAGAAAGCAGAGAGGGAGTGTCAGAGGGCACCCTaGAGAGAAAGTCTAGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DLCAGVLASGYVKKAERECQRAP*RESLVA Trigger: AGCTACTAGACTTTCTCTCCAGGGTGCCCTCTGACA...CTCCCTCTCTGCTTTCTTTACATACCCAGATGCAAGCACACCTGCACACAGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR GCA 90 bp | GACCTGTGTGCAGGTGTGCTTGCATCTGGGTATGTAAAGAAAGCAGAGAGGGAGGCTCCTCATGCTTTTTaGTGTCCTTTCCCCACACTT | + |
|
Preference number: 4 (lower is better) Translates to: DLCAGVLASGYVKKAEREAPHAF*CPFPTL Trigger: AAGTGTGGGGAAAGGACAGCAAAAAGCATGAGGAGC...CTCCCTCTCTGCTTTCTTTACATACCCAGATGCAAGCACACCTGCACACAGGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR GCA 90 bp | CTCTTCCCTGTTAGGATTATATGTGTGAACCACCAGCCTCAACTGGAAAGAACTGGCTGTCCTGGGTGCTaGTGGCTTTCCCTTTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: LFPVRIICVNHQPQLERTGCPGC*WLSLSW Trigger: CCATGAAAGGGAAAGCCAGCAGCACCCAGGACAGCC...AGTTCTTTCCAGTTGAGGCTGGTGGTTCACACATATAATCCTAACAGGGAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR CCA 90 bp | AAATTCATGCTAGTTCTGGCCCCATGCATACAAGGAGAGAAGTTCTGCCCACAGCACAGAGATCAGAGATaGAGACTCCAGTGCATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KFMLVLAPCIQGEKFCPQHRDQR*RLQCMG Trigger: CCCCATGCACTGGAGTCTCCATCTCTGATCTCTGTG...CTGTGGGCAGAACTTCTCTCCTTGTATGCATGGGGCCAGAACTAGCATGAATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| 3UTR CAA 72 bp | GTGCTGCTGGCTTTCCCTTTCATGGGTCTGAGGAAGTaGTACAGAAAGAGTAGCAACAATGCCAGAGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: VLLAFPFMGLRK*YRKSSNNARGI Trigger: GATCCCTCTGGCATTGTTGCTACTCTTTCTGTACAACTTCCTCAGACCCATGAAAGGGAAAGCCAGCAGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205410.2 |
||
| CDS-3UTR TCA 90 bp | GACCTGTGTGCAGGTGTGCTTGCATCTGGGTATGTAAAGAAAGCAGAGAGGGAGTTCACACGGAGCTTTTaGTCAAGGCTTTGTATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: DLCAGVLASGYVKKAEREFTRSF*SRLCIG Trigger: GCCAATACAAAGCCTTGATCAAAAGCTCCGTGTGAA...CTCCCTCTCTGCTTTCTTTACATACCCAGATGCAAGCACACCTGCACACAGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCTGTCCTGGGTGCTGCTGGCTTTCCCTTTCATGGGTCTGAGGAAGTTGTATTCCAGGAAAATGAATaGCTTGTTTCTCTGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LAVLGAAGFPFHGSEEVVFQENE*LVSLRS Trigger: AGACCTCAGAGAAACAAGCCATTCATTTTCCTGGAA...TACAACTTCCTCAGACCCATGAAAGGGAAAGCCAGCAGCACCCAGGACAGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205410.2 |
||
| CDS-3UTR GCA 90 bp | GTGCACAGGGACCTGTGTGCAGGTGTGCTTGCATCTGGGTATGTAAAGAAAGCATTGCTTTTGTACCTCTaGTCTCCCAGTTTTAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: VHRDLCAGVLASGYVKKALLLYL*SPSFNW Trigger: CCAGTTAAAACTGGGAGAGCAGAGGTACAAAAGCAA...TGCTTTCTTTACATACCCAGATGCAAGCACACCTGCACACAGGTCCCTGTGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR GCA 90 bp | GCTCCCACAGTCTCAGACTTGATGTCTTTTGATGGTTTGGTTGTCCAGGAATCCAAGTCAAACTGTTCCTaGCACTGCGGATTTGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: APTVSDLMSFDGLVVQESKSNCS*HCGFAL Trigger: GAGTGCAAATCCGCAGTGGCAGGAACAGTTTGACTT...GGATTCCTGGACAACCAAACCATCAAAAGACATCAAGTCTGAGACTGTGGGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR GCA 90 bp | GCTCCCACAGTCTCAGACTTGATGTCTTTTGATGGTTTGGTTGTCCAGGAATCCTCTGAAGTCGGTCATTaGCCAACTCCAATAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: APTVSDLMSFDGLVVQESSEVGH*PTPIGR Trigger: TCTGCCTATTGGAGTTGGGCAATGACCGACTTCAGA...GGATTCCTGGACAACCAAACCATCAAAAGACATCAAGTCTGAGACTGTGGGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR CCA 90 bp | GCCCCATGCATACAAGGAGAGAAGTTCTGCCCACAGCACCATGACAGGTGCTTCATCAAGGCTTTGTATTaGCAACACAACTATCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: APCIQGEKFCPQHHDRCFIKALY*QHNYLI Trigger: GATGAGATAGTTGTGTTGCCAATACAAAGCCTTGAT...GAAGCACCTGTCATGGTGCTGTGGGCAGAACTTCTCTCCTTGTATGCATGGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR TCA 90 bp | ACAGTCTCAGACTTGATGTCTTTTGATGGTTTGGTTGTCCAGGAATCCAGGATAAGATCGTCATTGCCGTaGGTCTTGTCGTGCTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: TVSDLMSFDGLVVQESRIRSSLP*VLSCSS Trigger: CGAAGAGCACGACAAGACTCACGGCAATGACGATCT...TATCCTGGATTCCTGGACAACCAAACCATCAAAAGACATCAAGTCTGAGACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR TCA 90 bp | ATACCCGTGCACAGGGACCTGTGTGCAGGTGTGCTTGCATCTGGGTATGTAAAGTGTTCCACTCAGGATTaGGGTTTTTGTAAATGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: IPVHRDLCAGVLASGYVKCSTQD*GFCKWY Trigger: ATACCATTTACAAAAACCTCAATCCTGAGTGGAACA...CTTTACATACCCAGATGCAAGCACACCTGCACACAGGTCCCTGTGCACGGGTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR TCA 90 bp | GTGCTGCTGGCTTTCCCTTTCATGGGTCTGAGGAAGTTGTACAGAAAGAGTAGCATTGGAAGCAGCTTTTaGAGAACTGTACTGTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VLLAFPFMGLRKLYRKSSIGSSF*RTVLCS Trigger: GGAACACAGTACAGTTCTTCAAAAGCTGCTTCCAAT...GCTACTCTTTCTGTACAACTTCCTCAGACCCATGAAAGGGAAAGCCAGCAGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205410.2 |
||
| CDS-3UTR GCA 90 bp | GACACCTTGTTTTATGTCCTAAAAATGGATATGAAGCTCCCACAGTCTCAGACTTCAGTGAGCTGCTGCTaGTCTTCGGGACAATGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DTLFYVLKMDMKLPQSQTSVSCC*SSGQCL Trigger: CAGGCATTGTCCCGAAGAGCAGCAGCAGCTCACTGA...AGTCTGAGACTGTGGGAGCTTCATATCCATTTTTAGGACATAAAACAAGGTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR GCA 90 bp | GATGGTGTTCAGACATGTGGACACCTTGTTTTATGTCCTAAAAATGGATATGAACCCGTGGACATGGCTTaGTTCCTCCTGGCTCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: DGVQTCGHLVLCPKNGYEPVDMA*FLLAPV Trigger: GACTGGAGCCAGGAGGAAGCAAGCCATGTCCACGGG...TTCATATCCATTTTTAGGACATAAAACAAGGTGTCCACATGTCTGAACACCATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR GCA 90 bp | AAATCTGTCGAAGGTATTGAAATAAGTTCCGCATCATCCTGGAATCAAGTGGTCTGCCTGCCACTCTTCTaGGGGAGAGGCATAGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: KSVEGIEISSASSWNQVVCLPLF*GRGIDL Trigger: GAGATCTATGCCTCTCCCGCAGAAGAGTGGCAGGCA...GACCACTTGATTCCAGGATGATGCGGAACTTATTTCAATACCTTCGACAGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR GCA 90 bp | GCTGTCCTCGAGGATGGTGTTCAGACATGTGGACACCTTGTTTTATGTCCTAAACTGCCACTGCGGATTTaGACTCTTACACAGTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AVLEDGVQTCGHLVLCPKLPLRI*TLTQCL Trigger: AAGACACTGTGTAAGAGTGCAAATCCGCAGTGGCAG...TTTAGGACATAAAACAAGGTGTCCACATGTCTGAACACCATCCTCGAGGACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR GCA 90 bp | AGGATACCCGTGCACAGGGACCTGTGTGCAGGTGTGCTTGCATCTGGGTATGTAAGCCCTTTAAAAGCTTaGTCTAAGTCTTTATTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RIPVHRDLCAGVLASGYVSPLKA*SKSLFF Trigger: GAAGAATAAAGACTTAGAGCAAGCTTTTAAAGGGCT...TACATACCCAGATGCAAGCACACCTGCACACAGGTCCCTGTGCACGGGTATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR CCA 90 bp | ATACCCGTGCACAGGGACCTGTGTGCAGGTGTGCTTGCATCTGGGTATGTAAAGGCTCATTATTGTCGATaGAATAAGGATTTCGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IPVHRDLCAGVLASGYVKAHYCR*NKDFEA Trigger: AGCTTCGAAATCCTTATTCCATCGACAATAATGAGC...CTTTACATACCCAGATGCAAGCACACCTGCACACAGGTCCCTGTGCACGGGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR TCA 90 bp | GTGCTGCTGGCTTTCCCTTTCATGGGTCTGAGGAAGTTGTACAGAAAGAGTAGCTCCATATTGCCAAAGTaGGTCTTTTTACACGGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: VLLAFPFMGLRKLYRKSSSILPK*VFLHGL Trigger: TAGACCGTGTAAAAAGACTCACTTTGGCAATATGGA...GCTACTCTTTCTGTACAACTTCCTCAGACCCATGAAAGGGAAAGCCAGCAGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205410.2 |
||
| CDS-3UTR GCA 90 bp | GAACTGATTCTTAGTGGAAAATCTGTCGAAGGTATTGAAATAAGTTCCGCATCACTTCGGGACAATGCCTaGAGTGGACAGGCTGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ELILSGKSVEGIEISSASLRDNA*SGQAVG Trigger: CCCAACAGCCTGTCCACTGCAGGCATTGTCCCGAAG...TGATGCGGAACTTATTTCAATACCTTCGACAGATTTTCCACTAAGAATCAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR GCA 90 bp | AGGATGGTGTTCAGACATGTGGACACCTTGTTTTATGTCCTAAAAATGGATATGGCTTCAGTGAGCTGCTaGTGCTCTTCGGGACAATGC | + |
|
Preference number: 4 (lower is better) Translates to: RMVFRHVDTLFYVLKMDMASVSC*CSSGQC Trigger: GCATTGTCCCGAAGAGCAGCAGCAGCTCACTGAAGC...CATATCCATTTTTAGGACATAAAACAAGGTGTCCACATGTCTGAACACCATCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR GCA 90 bp | AAATCTGTCGAAGGTATTGAAATAAGTTCCGCATCATCCTGGAATCAAGTGGTCCCCAGTCGCTCCTCATaGTTTTTGCTGTCCTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KSVEGIEISSASSWNQVVPSRSS*FLLSFP Trigger: GGGAAAGGACAGCAAAAAGCATGAGGAGCGACTGGG...GACCACTTGATTCCAGGATGATGCGGAACTTATTTCAATACCTTCGACAGATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR GCA 90 bp | CTCTTCCCTGTTAGGATTATATGTGTGAACCACCAGCCTCAACTGGAAAGAACTTCTTTTTGGACAGCTTaGGGCTGTCTTCCACAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LFPVRIICVNHQPQLERTSFWTA*GCLPQS Trigger: GCTTTGTGGAAGACAGCCGCAAGCTGTCCAAAAAGA...AGTTCTTTCCAGTTGAGGCTGGTGGTTCACACATATAATCCTAACAGGGAAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR TCA 90 bp | ACTAACAGATTTACTGGGGCTTTTAGAATCTCGTCAAGGCTCCTTTCCAGCCAGATTGGAAGCAGCTTTTaGAGAACTGTACTGTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TNRFTGAFRISSRLLSSQIGSSF*RTVLCS Trigger: GGAACACAGTACAGTTCTTCAAAAGCTGCTTCCAAT...CTGGCTGGAAAGGAGCCTTGACGAGATTCTAAAAGCCCCAGTAAATCTGTTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR TCA 90 bp | GAACTGATTCTTAGTGGAAAATCTGTCGAAGGTATTGAAATAAGTTCCGCATCAGCATACTGCACCTTCTaGATGTCAGAGGGCACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ELILSGKSVEGIEISSASAYCTF*MSEGTL Trigger: CAGGGTGCCCTCTGACATTCAGAAGGTGCAGTATGC...TGATGCGGAACTTATTTCAATACCTTCGACAGATTTTCCACTAAGAATCAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR GCA 90 bp | GATGGTGTTCAGACATGTGGACACCTTGTTTTATGTCCTAAAAATGGATATGAACCAAGGGAAGGTTTGTaGAGATCCAGGGCACTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DGVQTCGHLVLCPKNGYEPREGL*RSRALW Trigger: CCAGAGTGCCCTGGATCTGCACAAACCTTCCCTTGG...TTCATATCCATTTTTAGGACATAAAACAAGGTGTCCACATGTCTGAACACCATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR GCA 90 bp | AACAGAACAGGAGCTAAACACAGTAAACTAGGTTTCCTACCTCAGCTTTTCTTTGGATCAAGGAGGACTTaGTGGCACTTAACCGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NRTGAKHSKLGFLPQLFFGSRRT*WHLTAS Trigger: GGAAGCGGTTAAGTGCCAGCAAGTCCTCCTTGATCC...AAAGAAAAGCTGAGGTAGGAAACCTAGTTTACTGTGTTTAGCTCCTGTTCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR CCA 90 bp | AGGGTGTGCTGTGGAGTTGTAGGGTACTCAGGATTCAAACACTATCTACAGAGGAAAGCGTTTTTCTCTTaGAGTGAAGGTCCTGATACT | + |
|
Preference number: 4 (lower is better) Translates to: RVCCGVVGYSGFKHYLQRKAFFS*SEGPDT Trigger: AGTATCAGGACCTTCACTCCAAGAGAAAAACGCTTT...CCTCTGTAGATAGTGTTTGAATCCTGAGTACCCTACAACTCCACAGCACACCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR CCA 90 bp | AAATTCATGCTAGTTCTGGCCCCATGCATACAAGGAGAGAAGTTCTGCCCACAGAATGTAGACTCCCATTaGAAGCAGCTTTTGAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KFMLVLAPCIQGEKFCPQNVDSH*KQLLKN Trigger: GTTCTTCAAAAGCTGCTTCCAATGGGAGTCTACATT...CTGTGGGCAGAACTTCTCTCCTTGTATGCATGGGGCCAGAACTAGCATGAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR CCA 90 bp | AGATTGAGTAACTGGTTAGACAAAGAGGTTCTCGGGTATCTATTGTATGTACAATGTCCTGGGTGCTGCTaGCTTTCCCTTTCATGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RLSNWLDKEVLGYLLYVQCPGCC*LSLSWV Trigger: GACCCATGAAAGGGAAAGCCAGCAGCACCCAGGACA...TTGTACATACAATAGATACCCGAGAACCTCTTTGTCTAACCAGTTACTCAATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR CCA 90 bp | ACTAACAGATTTACTGGGGCTTTTAGAATCTCGTCAAGGCTCCTTTCCAGCCAGAGATGTTCTGGACAGTaGAAACAATATCCTGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: TNRFTGAFRISSRLLSSQRCSGQ*KQYPGP Trigger: TGGTCCAGGATATTGTTTCCACTGTCCAGAACATCT...CTGGCTGGAAAGGAGCCTTGACGAGATTCTAAAAGCCCCAGTAAATCTGTTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| 3UTR CAA 72 bp | CTGTCCTCGAGGATGGTGTTCAGACATGTGGACACCTaGTTTTATGTCCTAAAAATGGATATGAAGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSSRMVFRHVDT*FYVLKMDMKLP Trigger: TGGGAGCTTCATATCCATTTTTAGGACATAAAACAAGGTGTCCACATGTCTGAACACCATCCTCGAGGACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079323.8 ENSMUST00000206466.2 |
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| 3UTR CAA 72 bp | TATTGCAGGCAAAGGAGAAATTACTTGGTCCTTTCATaGTGGGACTTCTGGGTTGGCCCATATCTGAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: YCRQRRNYLVLS*WDFWVGPYLKE Trigger: TTCCTTCAGATATGGGCCAACCCAGAAGTCCCACAATGAAAGGACCAAGTAATTTCTCCTTTGCCTGCAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| 3UTR CAA 72 bp | TGGAAGTTATTCTATTGCAGGCAAAGGAGAAATTACTaGGTCCTTTCATTGTGGGACTTCTGGGTTGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: WKLFYCRQRRNY*VLSLWDFWVGP Trigger: TGGGCCAACCCAGAAGTCCCACAATGAAAGGACCAAGTAATTTCTCCTTTGCCTGCAATAGAATAACTTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| CDS-3UTR GCA 90 bp | AAAGAAAGCAGAGAGGGAGTAGAAGGTTGCACACAACATCCATATCTCAGGACATCTTACACAGTGTCTTaGTTTTGTACCTCTGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KESREGVEGCTQHPYLRTSYTVS*FCTSAL Trigger: GAGAGCAGAGGTACAAAAGCAAGACACTGTGTAAGA...TGTCCTGAGATATGGATGTTGTGTGCAACCTTCTACTCCCTCTCTGCTTTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| CDS-3UTR GCA 90 bp | GTGCTGCTGGCTTTCCCTTTCATGGGTCTGAGGAAGTTGTACAGAAAGAGTAGCTACTGTGTTCCATATTaGCAAAGTGAGTCTTTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: VLLAFPFMGLRKLYRKSSYCVPY*QSESFY Trigger: GTAAAAAGACTCACTTTGGCAATATGGAACACAGTA...GCTACTCTTTCTGTACAACTTCCTCAGACCCATGAAAGGGAAAGCCAGCAGCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205410.2 |
||
| CDS-3UTR CCA 90 bp | GAGGATGGTGTTCAGACATGTGGACACCTTGTTTTATGTCCTAAAAATGGATATCAGTGGACAGGCTGTTaGGTACTGAGATGTAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: EDGVQTCGHLVLCPKNGYQWTGC*VLRCRM Trigger: CATCCTACATCTCAGTACCCAACAGCCTGTCCACTG...ATATCCATTTTTAGGACATAAAACAAGGTGTCCACATGTCTGAACACCATCCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR CCA 90 bp | GAACTGATTCTTAGTGGAAAATCTGTCGAAGGTATTGAAATAAGTTCCGCATCAGGAGACTCCAGTGCATaGGGTCAGGGTGATCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: ELILSGKSVEGIEISSASGDSSA*GQGDQH Trigger: ATGTTGATCACCCTGACCCCATGCACTGGAGTCTCC...TGATGCGGAACTTATTTCAATACCTTCGACAGATTTTCCACTAAGAATCAGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR CCA 90 bp | AAAGAAAGCAGAGAGGGAGTAGAAGGTTGCACACAACATCCATATCTCAGGACATCCTCCAAGATGTTCTaGACAGTGGAAACAATATCC | + |
|
Preference number: 4 (lower is better) Translates to: KESREGVEGCTQHPYLRTSSKMF*TVETIS Trigger: GGATATTGTTTCCACTGTCCAGAACATCTTGGAGGA...TGTCCTGAGATATGGATGTTGTGTGCAACCTTCTACTCCCTCTCTGCTTTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| 3UTR CAA 72 bp | CCTAAAAATGGATATGAAGCTCCCACAGTCTCAGACTaGATGTCTTTTGATGGTTTGGTTGTCCAGGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: PKNGYEAPTVSD*MSFDGLVVQES Trigger: GGATTCCTGGACAACCAAACCATCAAAAGACATCAAGTCTGAGACTGTGGGAGCTTCATATCCATTTTTAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079323.8 ENSMUST00000206466.2 |
||
| 3UTR CAA 72 bp | CTTCAGTTAAAGAGTGTTGAAAAAGTTGGCCCTGTCTaGCTCTCAAATACCAGCTGGCATTTGTGTCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LQLKSVEKVGPV*LSNTSWHLCPE Trigger: TTCAGGACACAAATGCCAGCTGGTATTTGAGAGCAAGACAGGGCCAACTTTTTCAACACTCTTTAACTGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR TCA 90 bp | AAAGAAAGCAGAGAGGGAGTAGAAGGTTGCACACAACATCCATATCTCAGGACATCTTCTTGCTTAGGTTaGTTAACAAAGGTCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KESREGVEGCTQHPYLRTSSCLG*LTKVWF Trigger: GAACCAGACCTTTGTTAATCAACCTAAGCAAGAAGA...TGTCCTGAGATATGGATGTTGTGTGCAACCTTCTACTCCCTCTCTGCTTTCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCTTTCCCTTTCATGGGTCTGAGGAAGTTGTACAGAAAGAGTAGCAACAATAATGTAGACTCCCATTaGAAGCAGCTTTTGAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LAFPFMGLRKLYRKSSNNNVDSH*KQLLKN Trigger: GTTCTTCAAAAGCTGCTTCCAATGGGAGTCTACATT...ATTGTTGCTACTCTTTCTGTACAACTTCCTCAGACCCATGAAAGGGAAAGCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205410.2 |
||
| CDS-3UTR GCA 90 bp | CTCTTCCCTGTTAGGATTATATGTGTGAACCACCAGCCTCAACTGGAAAGAACTGATTCTTCTTCAAAATaGTGCGATGTCATAGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LFPVRIICVNHQPQLERTDSSSK*CDVIEA Trigger: TGCTTCTATGACATCGCAGCATTTTGAAGAAGAATC...AGTTCTTTCCAGTTGAGGCTGGTGGTTCACACATATAATCCTAACAGGGAAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR GCA 90 bp | GAACTGATTCTTAGTGGAAAATCTGTCGAAGGTATTGAAATAAGTTCCGCATCAAACTGTTCCTGCCACTaGGGATTTGCACTCTTACAC | + |
|
Preference number: 4 (lower is better) Translates to: ELILSGKSVEGIEISSASNCSCH*GFALLH Trigger: GTGTAAGAGTGCAAATCCGCAGTGGCAGGAACAGTT...TGATGCGGAACTTATTTCAATACCTTCGACAGATTTTCCACTAAGAATCAGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR GCA 90 bp | CTCTTCCCTGTTAGGATTATATGTGTGAACCACCAGCCTCAACTGGAAAGAACTGAAGGTCCTGATACTTaGTTTGACCGGATTATATAT | + |
|
Preference number: 4 (lower is better) Translates to: LFPVRIICVNHQPQLERTEGPDT*FDRIIY Trigger: ATATATAATCCGGTCAAAGCAAGTATCAGGACCTTC...AGTTCTTTCCAGTTGAGGCTGGTGGTTCACACATATAATCCTAACAGGGAAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR GCA 90 bp | AGAAATCGGGCTATGCCACAGAGAAATCAGGAAGAAGAATATGAAGTAAAACAGCTTCAATGTCCAAAATaGCCATCCTGTCAGAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RNRAMPQRNQEEEYEVKQLQCPK*PSCQRS Trigger: ACTTCTCTGACAGGATGGGCATTTTGGACATTGAAG...CTGTTTTACTTCATATTCTTCTTCCTGATTTCTCTGTGGCATAGCCCGATTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| CDS-3UTR TCA 90 bp | AAAAATGGATATGAAGCTCCCACAGTCTCAGACTTGATGTCTTTTGATGGTTTGTCCATATTGCCAAAGTaGGTCTTTTTACACGGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: KNGYEAPTVSDLMSFDGLSILPK*VFLHGL Trigger: TAGACCGTGTAAAAAGACTCACTTTGGCAATATGGA...CAAACCATCAAAAGACATCAAGTCTGAGACTGTGGGAGCTTCATATCCATTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| 3UTR CAA 72 bp | ATAGGGGGATGGAGACTGGAAATAACTGAACCTCTGTaGATTGTTGGTTTTAGGACAGTTTGTACTATATGT | + |
|
Preference number: 4 (lower is better) Translates to: IGGWRLEITEPL*IVGFRTVCTIC Trigger: ACATATAGTACAAACTGTCCTAAAACCAACAATCAACAGAGGTTCAGTTATTTCCAGTCTCCATCCCCCTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| 3UTR CAA 72 bp | AGGAACAAGACAATGAGGTATTGTTTACACAGAAGATaGAGTAACTGGTTAGACAAAGAGGTTCTCGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: RNKTMRYCLHRR*SNWLDKEVLGY Trigger: ATACCCGAGAACCTCTTTGTCTAACCAGTTACTCAATCTTCTGTGTAAACAATACCTCATTGTCTTGTTCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| CDS-3UTR TCA 90 bp | AGATTGAGTAACTGGTTAGACAAAGAGGTTCTCGGGTATCTATTGTATGTACAACAAATGCAGAACCCATaGAATCAGACTTGGTTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RLSNWLDKEVLGYLLYVQQMQNP*NQTWLS Trigger: ACTTAACCAAGTCTGATTTCATGGGTTCTGCATTTG...TTGTACATACAATAGATACCCGAGAACCTCTTTGTCTAACCAGTTACTCAATCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR GCA 90 bp | GAACTGATTCTTAGTGGAAAATCTGTCGAAGGTATTGAAATAAGTTCCGCATCATCTGAGAACGACAAATaGAGAACCCATGAAATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ELILSGKSVEGIEISSASSENDK*RTHEIR Trigger: TCTGATTTCATGGGTTCTGCATTTGTCGTTCTCAGA...TGATGCGGAACTTATTTCAATACCTTCGACAGATTTTCCACTAAGAATCAGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| 3UTR CAA 72 bp | AGTAACTGGTTAGACAAAGAGGTTCTCGGGTATCTATaGTATGTACAACTAACAGATTTACTGGGGCTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SNWLDKEVLGYL*YVQLTDLLGLL Trigger: TAAAAGCCCCAGTAAATCTGTTAGTTGTACATACAATAGATACCCGAGAACCTCTTTGTCTAACCAGTTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| CDS-3UTR GCA 90 bp | GTTTTATGTCCTAAAAATGGATATGAAGCTCCCACAGTCTCAGACTTGATGTCTTACTGTGTTCCATATTaGCAAAGTGAGTCTTTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: VLCPKNGYEAPTVSDLMSYCVPY*QSESFY Trigger: GTAAAAAGACTCACTTTGGCAATATGGAACACAGTA...AGACATCAAGTCTGAGACTGTGGGAGCTTCATATCCATTTTTAGGACATAAAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR CCA 90 bp | GAGGATGGTGTTCAGACATGTGGACACCTTGTTTTATGTCCTAAAAATGGATATCAACACATAACAGTTTaGTTGTCCATCTCTAATAGA | + |
|
Preference number: 4 (lower is better) Translates to: EDGVQTCGHLVLCPKNGYQHITV*LSISNR Trigger: TCTATTAGAGATGGACAACCAAACTGTTATGTGTTG...ATATCCATTTTTAGGACATAAAACAAGGTGTCCACATGTCTGAACACCATCCTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| CDS-3UTR CCA 90 bp | GATGGTGTTCAGACATGTGGACACCTTGTTTTATGTCCTAAAAATGGATATGAATTGATAATATCTTTTTaGACAGCTTGCGGCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: DGVQTCGHLVLCPKNGYELIISF*TACGCL Trigger: AAGACAGCCGCAAGCTGTCCAAAAAGATATTATCAA...TTCATATCCATTTTTAGGACATAAAACAAGGTGTCCACATGTCTGAACACCATC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| CDS TCA 90 bp | CAGGGGCCAAAGCCTCTGCTTCCAGGAGGTCAGGCACTGAGAGGCTaGGGCGCCTGTCCAGGTGATGCTGCACCCTTAAATCCAAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: QGPKPLLPGGQALRG*GACPGDAAPLNPKV Trigger: AACCTTTGGATTTAAGGGTGCAGCATCACCTGGACAGGCGCCTCAGCCTCTCAGTGCCTGACCTCCTGGAAGCAGAGGCTTTGGCCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| CDS GCA 90 bp | TTTGTGCAGATCCAGGGCACTCTGGCTGAATGCCTGCCACTCTTCTaGGGGAGAGGCATAGATCTCTTCAGAGTCGGTGTCCACCCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: FVQIQGTLAECLPLF*GRGIDLFRVGVHPV Trigger: CACGGGGTGGACACCGACTCTGAAGAGATCTATGCCTCTCCCGCAGAAGAGTGGCAGGCATTCAGCCAGAGTGCCCTGGATCTGCACAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| CDS CCA 90 bp | CTCGAAAGGGCAGACACAGAGATCAGAGATGGAGACTCCAGTGCATaGGGTCAGGGTGATCAACATGAGGAGAGCCCCCTGGCAGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LERADTEIRDGDSSA*GQGDQHEESPLAAL Trigger: GAGAGCTGCCAGGGGGCTCTCCTCATGTTGATCACCCTGACCCCATGCACTGGAGTCTCCATCTCTGATCTCTGTGTCTGCCCTTTCGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| CDS-3UTR CAA 90 bp | GTGCACAGGGACCTGTGTGCAGGTGTGCTTGCATCTGGGTATGTAAAGAAAGCACCCCGTGGACATGGCTaGCTTCCTCCTGGCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: VHRDLCAGVLASGYVKKAPRGHG*LPPGSS Trigger: ACTGGAGCCAGGAGGAAGCAAGCCATGTCCACGGGG...TGCTTTCTTTACATACCCAGATGCAAGCACACCTGCACACAGGTCCCTGTGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| CDS-3UTR CAA 90 bp | GTGCACAGGGACCTGTGTGCAGGTGTGCTTGCATCTGGGTATGTAAAGAAAGCATCCCGGACCACGAGGTaGCGGCCTTCCTTCAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: VHRDLCAGVLASGYVKKASRTTR*RPSFRC Trigger: ACACCTGAAGGAAGGCCGCAACCTCGTGGTCCGGGA...TGCTTTCTTTACATACCCAGATGCAAGCACACCTGCACACAGGTCCCTGTGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| CDS GCA 90 bp | AGAGCCCCCTGGCAGCTCTCCAGAGGCAGCTCCAAGCAATTGTCTTaGTTCAGTGGGAGCGCTGAGATATCTACTTTACACGTGCCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RAPWQLSRGSSKQLS*FSGSAEISTLHVPS Trigger: ACTGGGCACGTGTAAAGTAGATATCTCAGCGCTCCCACTGAAGCAAGACAATTGCTTGGAGCTGCCTCTGGAGAGCTGCCAGGGGGCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| CDS TCA 90 bp | GCTTCCAGGAGGTCAGGCACTGAGAGGCTGAGGCGCCTGTCCAGGTaGTGCTGCACCCTTAAATCCAAAGGTTTGCTTGGGCTCTTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: ASRRSGTERLRRLSR*CCTLKSKGLLGLFL Trigger: TAAAAAGAGCCCAAGCAAACCTTTGGATTTAAGGGTGCAGCATCACCTGGACAGGCGCCTCAGCCTCTCAGTGCCTGACCTCCTGGAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| CDS GCA 90 bp | TCTTCCAAGGGAAGGTTTGTGCAGATCCAGGGCACTCTGGCTGAATaGCTGCCACTCTTCTGCGGGAGAGGCATAGATCTCTTCAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SSKGRFVQIQGTLAE*LPLFCGRGIDLFRV Trigger: GACTCTGAAGAGATCTATGCCTCTCCCGCAGAAGAGTGGCAGGCATTCAGCCAGAGTGCCCTGGATCTGCACAAACCTTCCCTTGGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| CDS TCA 90 bp | CTCCAGAGGCAGCTCCAAGCAATTGTCTTGCTTCAGTGGGAGCGCTaGGATATCTACTTTACACGTGCCCAGTCGCTCCTCATGCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LQRQLQAIVLLQWER*DIYFTRAQSLLMLF Trigger: AAAAAGCATGAGGAGCGACTGGGCACGTGTAAAGTAGATATCTCAGCGCTCCCACTGAAGCAAGACAATTGCTTGGAGCTGCCTCTGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| CDS CCA 90 bp | GAGAGTTCTGGAAGGCATATCGCTGGGAAATCTGCTGTCTTTCACTaGGATCCTCGAAAGGGCAGACACAGAGATCAGAGATGGAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: ESSGRHIAGKSAVFH*DPRKGRHRDQRWRL Trigger: GAGTCTCCATCTCTGATCTCTGTGTCTGCCCTTTCGAGGATCCCAGTGAAAGACAGCAGATTTCCCAGCGATATGCCTTCCAGAACTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| CDS-3UTR CAA 90 bp | TCCAGATGTTTGTGTAAGGAATCTTGGGTCACTAGGGAACCAGGCCCCAAACACAGAAAGTCCGGGGCCTaGTCTCCATCCTCATCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SRCLCKESWVTREPGPKHRKSGA*SPSSSN Trigger: GTTTGATGAGGATGGAGACAAGGCCCCGGACTTTCT...GTGTTTGGGGCCTGGTTCCCTAGTGACCCAAGATTCCTTACACAAACATCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| CDS-3UTR CAA 90 bp | AAATTCATGCTAGTTCTGGCCCCATGCATACAAGGAGAGAAGTTCTGCCCACAGCGCTCCTCATGCTTTTaGCTGTCCTTTCCCCACACT | + |
|
Preference number: 5 (lower is better) Translates to: KFMLVLAPCIQGEKFCPQRSSCF*LSFPHT Trigger: AGTGTGGGGAAAGGACAGCAAAAAGCATGAGGAGCG...CTGTGGGCAGAACTTCTCTCCTTGTATGCATGGGGCCAGAACTAGCATGAATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| CDS TCA 90 bp | TCAAAATGCTGCGATGTCATAGAAGCATTCAGATCGTCATTGCCGTaGGTCTTGTCGTGCTCTTCGGGAGCATCTCTTCCAAGGGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SKCCDVIEAFRSSLP*VLSCSSGASLPREG Trigger: ACCTTCCCTTGGAAGAGATGCTCCCGAAGAGCACGACAAGACTCACGGCAATGACGATCTGAATGCTTCTATGACATCGCAGCATTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| CDS GCA 90 bp | TTCACATCCTTCAGAGAGTTCTGGAAGGCATATCGCTGGGAAATCTaGTGTCTTTCACTGGGATCCTCGAAAGGGCAGACACAGAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: FTSFREFWKAYRWEI*CLSLGSSKGQTQRS Trigger: TGATCTCTGTGTCTGCCCTTTCGAGGATCCCAGTGAAAGACAGCAGATTTCCCAGCGATATGCCTTCCAGAACTCTCTGAAGGATGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS CCA 90 bp | TTCACCTGTAGAATCCCCACATCCTTCACATCCTTCAGAGAGTTCTaGAAGGCATATCGCTGGGAAATCTGCTGTCTTTCACTGGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: FTCRIPTSFTSFREF*KAYRWEICCLSLGS Trigger: GGATCCCAGTGAAAGACAGCAGATTTCCCAGCGATATGCCTTCCAGAACTCTCTGAAGGATGTGAAGGATGTGGGGATTCTACAGGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR CAA 90 bp | GACCTGTGTGCAGGTGTGCTTGCATCTGGGTATGTAAAGAAAGCAGAGAGGGAGCTTCACACGGAGCTTTaGATCAAGGCTTTGTATTGG | + |
|
Preference number: 5 (lower is better) Translates to: DLCAGVLASGYVKKAERELHTEL*IKALYW Trigger: CCAATACAAAGCCTTGATCAAAAGCTCCGTGTGAAG...CTCCCTCTCTGCTTTCTTTACATACCCAGATGCAAGCACACCTGCACACAGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR CAA 90 bp | GTGCACAGGGACCTGTGTGCAGGTGTGCTTGCATCTGGGTATGTAAAGAAAGCACTCTTACACAGTGTCTaGCTTTTGTACCTCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VHRDLCAGVLASGYVKKALLHSV*LLYLCS Trigger: AGAGCAGAGGTACAAAAGCAAGACACTGTGTAAGAG...TGCTTTCTTTACATACCCAGATGCAAGCACACCTGCACACAGGTCCCTGTGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS GCA 90 bp | GTCAGAGAAGTAGTGAAAGTCAAACTGTTCCTGCCACTGCGGATTTaGACTCTTACACAGTGTCTTGCTTTTGTACCTCTGCTCTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VREVVKVKLFLPLRI*TLTQCLAFVPLLSQ Trigger: CTGGGAGAGCAGAGGTACAAAAGCAAGACACTGTGTAAGAGTGCAAATCCGCAGTGGCAGGAACAGTTTGACTTTCACTACTTCTCTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGTGCTGCTGGCTTTCCCTTTCATGGGTCTGAGGAAGTTGTACAGAAAGAGCACGGTCTACATATGTaGATACTTTCCTCCAAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LGAAGFPFHGSEEVVQKEHGLHM*ILSSKS Trigger: GCTTTTGGAGGAAAGTATCAACATATGTAGACCGTG...CTCTTTCTGTACAACTTCCTCAGACCCATGAAAGGGAAAGCCAGCAGCACCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205410.2 |
||
| CDS-3UTR CAA 90 bp | ATACCCGTGCACAGGGACCTGTGTGCAGGTGTGCTTGCATCTGGGTATGTAAAGCTTTTGATCAAGGCTTaGTATTGGCAACACAACTAT | + |
|
Preference number: 5 (lower is better) Translates to: IPVHRDLCAGVLASGYVKLLIKA*YWQHNY Trigger: ATAGTTGTGTTGCCAATACAAAGCCTTGATCAAAAG...CTTTACATACCCAGATGCAAGCACACCTGCACACAGGTCCCTGTGCACGGGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR CAA 90 bp | AAAGAAAGCAGAGAGGGAGTAGAAGGTTGCACACAACATCCATATCTCAGGACACACAGTGTCTTGCTTTaGTACCTCTGCTCTCCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: KESREGVEGCTQHPYLRTHSVLL*YLCSPS Trigger: ACTGGGAGAGCAGAGGTACAAAAGCAAGACACTGTG...TGTCCTGAGATATGGATGTTGTGTGCAACCTTCTACTCCCTCTCTGCTTTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS CCA 90 bp | TTCTTTCCTTCCAAGAGAGTTATACTTATAATCCCATTCCAGAGTTaGTTCTTCCGAAGGGACTCTGAGAGGCGTAGGTTGCGGATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: FFPSKRVILIIPFQS*FFRRDSERRRLRIK Trigger: CTTGATCCGCAACCTACGCCTCTCAGAGTCCCTTCGGAAGAACCAACTCTGGAATGGGATTATAAGTATAACTCTCTTGGAAGGAAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS CCA 90 bp | CTTTTTGGACAGCTTGCGGCTGTCTTCCACAAAGCGTTTTTCTCTTaGAGTGAAGGTCCTGATACTTGCTTTGACCGGATTATATATGAG | + |
|
Preference number: 5 (lower is better) Translates to: LFGQLAAVFHKAFFS*SEGPDTCFDRIIYE Trigger: CTCATATATAATCCGGTCAAAGCAAGTATCAGGACCTTCACTCCAAGAGAAAAACGCTTTGTGGAAGACAGCCGCAAGCTGTCCAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR CAA 90 bp | AAATTCATGCTAGTTCTGGCCCCATGCATACAAGGAGAGAAGTTCTGCCCACAGGATCAAGGCTTTGTATaGGCAACACAACTATCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: KFMLVLAPCIQGEKFCPQDQGFV*ATQLSH Trigger: ATGAGATAGTTGTGTTGCCAATACAAAGCCTTGATC...CTGTGGGCAGAACTTCTCTCCTTGTATGCATGGGGCCAGAACTAGCATGAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR CAA 90 bp | GCTGTCCTCGAGGATGGTGTTCAGACATGTGGACACCTTGTTTTATGTCCTAAACATTGGAAGCAGCTTTaGAAGAACTGTACTGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: AVLEDGVQTCGHLVLCPKHWKQL*KNCTVF Trigger: GAACACAGTACAGTTCTTCAAAAGCTGCTTCCAATG...TTTAGGACATAAAACAAGGTGTCCACATGTCTGAACACCATCCTCGAGGACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR CAA 90 bp | GCTTTCCCTTTCATGGGTCTGAGGAAGTTGTACAGAAAGAGTAGCAACAATGCCCATTGGAAGCAGCTTTaGAAGAACTGTACTGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: AFPFMGLRKLYRKSSNNAHWKQL*KNCTVF Trigger: GAACACAGTACAGTTCTTCAAAAGCTGCTTCCAATG...GGCATTGTTGCTACTCTTTCTGTACAACTTCCTCAGACCCATGAAAGGGAAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205410.2 |
||
| CDS-3UTR CAA 90 bp | ATGGTGTTCAGACATGTGGACACCTTGTTTTATGTCCTAAAAATGGATATGAAGCCTGCCACTGCGGATTaGCACTCTTACACAGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: MVFRHVDTLFYVLKMDMKPATAD*HSYTVS Trigger: AGACACTGTGTAAGAGTGCAAATCCGCAGTGGCAGG...CTTCATATCCATTTTTAGGACATAAAACAAGGTGTCCACATGTCTGAACACCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR CAA 90 bp | AAATCTGTCGAAGGTATTGAAATAAGTTCCGCATCATCCTGGAATCAAGTGGTCGACCAACGATGCCTCTaGAAATCACCCTGTTTTACA | + |
|
Preference number: 5 (lower is better) Translates to: KSVEGIEISSASSWNQVVDQRCL*KSPCFT Trigger: TGTAAAACAGGGTGATTTCAAGAGGCATCGTTGGTC...GACCACTTGATTCCAGGATGATGCGGAACTTATTTCAATACCTTCGACAGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR CAA 90 bp | AAAAATGGATATGAAGCTCCCACAGTCTCAGACTTGATGTCTTTTGATGGTTTGATCTTTTTGGACAGCTaGCGGCTGTCTTCCACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: KNGYEAPTVSDLMSFDGLIFLDS*RLSSTK Trigger: CTTTGTGGAAGACAGCCGCAAGCTGTCCAAAAAGAT...CAAACCATCAAAAGACATCAAGTCTGAGACTGTGGGAGCTTCATATCCATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR CAA 90 bp | GTTTTATGTCCTAAAAATGGATATGAAGCTCCCACAGTCTCAGACTTGATGTCTATGGGTCTGAGGAAGTaGTACAGAAAGAGTAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: VLCPKNGYEAPTVSDLMSMGLRK*YRKSSN Trigger: GTTGCTACTCTTTCTGTACAACTTCCTCAGACCCAT...AGACATCAAGTCTGAGACTGTGGGAGCTTCATATCCATTTTTAGGACATAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS CCA 90 bp | TCGATCATACACCTTCACACGGAGCTTTTGATCAAGGCTTTGTATTaGCAACACAACTATCTCATCCCAAATTGGGTTCAAGTTCTTATA | + |
|
Preference number: 5 (lower is better) Translates to: SIIHLHTELLIKALY*QHNYLIPNWVQVLI Trigger: TATAAGAACTTGAACCCAATTTGGGATGAGATAGTTGTGTTGCCAATACAAAGCCTTGATCAAAAGCTCCGTGTGAAGGTGTATGATCGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR CAA 90 bp | AGATTGAGTAACTGGTTAGACAAAGAGGTTCTCGGGTATCTATTGTATGTACAACTTGATAATATCTTTTaGGACAGCTTGCGGCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RLSNWLDKEVLGYLLYVQLDNIF*DSLRLS Trigger: AGACAGCCGCAAGCTGTCCAAAAAGATATTATCAAG...TTGTACATACAATAGATACCCGAGAACCTCTTTGTCTAACCAGTTACTCAATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS CCA 90 bp | AAAAACACCACAAATGCTATTGTACTCCTTAATGTAGACTCCCATTaGAAGCAGCTTTTGAAGAACTGTACTGTGTTCCATATTGCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: KNTTNAIVLLNVDSH*KQLLKNCTVFHIAK Trigger: TTTGGCAATATGGAACACAGTACAGTTCTTCAAAAGCTGCTTCCAATGGGAGTCTACATTAAGGAGTACAATAGCATTTGTGGTGTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR CAA 90 bp | GAACTGATTCTTAGTGGAAAATCTGTCGAAGGTATTGAAATAAGTTCCGCATCACACATAACAGTTTGGTaGTCCATCTCTAATAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: ELILSGKSVEGIEISSASHITVW*SISNRQ Trigger: CTGTCTATTAGAGATGGACAACCAAACTGTTATGTG...TGATGCGGAACTTATTTCAATACCTTCGACAGATTTTCCACTAAGAATCAGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS-3UTR CAA 90 bp | GTTTTATGTCCTAAAAATGGATATGAAGCTCCCACAGTCTCAGACTTGATGTCTCACGGTCTACATCTCTaGATAATATCTTTTTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: VLCPKNGYEAPTVSDLMSHGLHL*IISFWT Trigger: TGTCCAAAAAGATATTATCAAGAGATGTAGACCGTG...AGACATCAAGTCTGAGACTGTGGGAGCTTCATATCCATTTTTAGGACATAAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS TCA 72 bp | AGGGGCCAAAGCCTCTGCTTCCAGGAGGTCAGGCACTaGGAGGCTGAGGCGCCTGTCCAGGTGATGCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: RGQSLCFQEVRH*EAEAPVQVMLH Trigger: GTGCAGCATCACCTGGACAGGCGCCTCAGCCTCTCAGTGCCTGACCTCCTGGAAGCAGAGGCTTTGGCCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS CAA 72 bp | GGATCGCTCGTGCCACAGCGATCCCGGACCACGAGGTaGCGGCCTTCCTTCAGGTGTATGGTGAGGAGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: GSLVPQRSRTTR*RPSFRCMVRRY Trigger: GTACCTCCTCACCATACACCTGAAGGAAGGCCGCAACCTCGTGGTCCGGGATCGCTGTGGCACGAGCGATCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS CAA 90 bp | TTCACATACGGATCGCTCGTGCCACAGCGATCCCGGACCACGAGGTaGCGGCCTTCCTTCAGGTGTATGGTGAGGAGGTACGCGAAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: FTYGSLVPQRSRTTR*RPSFRCMVRRYAKG Trigger: CCCCTTCGCGTACCTCCTCACCATACACCTGAAGGAAGGCCGCAACCTCGTGGTCCGGGATCGCTGTGGCACGAGCGATCCGTATGTGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS TCA 72 bp | AAGCCTCTGCTTCCAGGAGGTCAGGCACTGAGAGGCTaGGGCGCCTGTCCAGGTGATGCTGCACCCTTAAAT | + |
|
Preference number: 6 (lower is better) Translates to: KPLLPGGQALRG*GACPGDAAPLN Trigger: ATTTAAGGGTGCAGCATCACCTGGACAGGCGCCTCAGCCTCTCAGTGCCTGACCTCCTGGAAGCAGAGGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS TCA 72 bp | CTGGCTCCAGTCCAGTTCTTCCTCAGACTGCTTCAGTaGGCTGCTGCTGCTCTTCGGGACAATGCCTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: LAPVQFFLRLLQ*AAAALRDNACS Trigger: ACTGCAGGCATTGTCCCGAAGAGCAGCAGCAGCTCACTGAAGCAGTCTGAGGAAGAACTGGACTGGAGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS GCA 72 bp | ATCCAGGGCACTCTGGCTGAATGCCTGCCACTCTTCTaGGGGAGAGGCATAGATCTCTTCAGAGTCGGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: IQGTLAECLPLF*GRGIDLFRVGV Trigger: GACACCGACTCTGAAGAGATCTATGCCTCTCCCGCAGAAGAGTGGCAGGCATTCAGCCAGAGTGCCCTGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS CCA 72 bp | GCAGACACAGAGATCAGAGATGGAGACTCCAGTGCATaGGGTCAGGGTGATCAACATGAGGAGAGCCCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: ADTEIRDGDSSA*GQGDQHEESPL Trigger: CAGGGGGCTCTCCTCATGTTGATCACCCTGACCCCATGCACTGGAGTCTCCATCTCTGATCTCTGTGTCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS CAA 72 bp | GCCCCCTGGCAGCTCTCCAGAGGCAGCTCCAAGCAATaGTCTTGCTTCAGTGGGAGCGCTGAGATATCTACT | + |
|
Preference number: 6 (lower is better) Translates to: APWQLSRGSSKQ*SCFSGSAEIST Trigger: AGTAGATATCTCAGCGCTCCCACTGAAGCAAGACAATTGCTTGGAGCTGCCTCTGGAGAGCTGCCAGGGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS GCA 72 bp | AGACAGTACTCCTCTTCTTCCGAAGTGGGCTGTGGCTaGCACAGAGCTTCAGCTCTGCATACTGCACCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: RQYSSSSEVGCG*HRASALHTAPS Trigger: AGAAGGTGCAGTATGCAGAGCTGAAGCTCTGTGGCAGCCACAGCCCACTTCGGAAGAAGAGGAGTACTGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS TCA 72 bp | CAGCTCCAAGCAATTGTCTTGCTTCAGTGGGAGCGCTaGGATATCTACTTTACACGTGCCCAGTCGCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: QLQAIVLLQWER*DIYFTRAQSLL Trigger: GAGGAGCGACTGGGCACGTGTAAAGTAGATATCTCAGCGCTCCCACTGAAGCAAGACAATTGCTTGGAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS TCA 72 bp | CTGCCACAGAGCTTCAGCTCTGCATACTGCACCTTCTaGATGTCAGAGGGCACCCTGGAGAGAAAGTCTAGT | + |
|
Preference number: 6 (lower is better) Translates to: LPQSFSSAYCTF*MSEGTLERKSS Trigger: ACTAGACTTTCTCTCCAGGGTGCCCTCTGACATTCAGAAGGTGCAGTATGCAGAGCTGAAGCTCTGTGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS GCA 72 bp | TGGCAGCTCTCCAGAGGCAGCTCCAAGCAATTGTCTTaGTTCAGTGGGAGCGCTGAGATATCTACTTTACAC | + |
|
Preference number: 6 (lower is better) Translates to: WQLSRGSSKQLS*FSGSAEISTLH Trigger: GTGTAAAGTAGATATCTCAGCGCTCCCACTGAAGCAAGACAATTGCTTGGAGCTGCCTCTGGAGAGCTGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS CCA 72 bp | GGAAGGCATATCGCTGGGAAATCTGCTGTCTTTCACTaGGATCCTCGAAAGGGCAGACACAGAGATCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: GRHIAGKSAVFH*DPRKGRHRDQR Trigger: TCTCTGATCTCTGTGTCTGCCCTTTCGAGGATCCCAGTGAAAGACAGCAGATTTCCCAGCGATATGCCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS TCA 72 bp | TGCGATGTCATAGAAGCATTCAGATCGTCATTGCCGTaGGTCTTGTCGTGCTCTTCGGGAGCATCTCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: CDVIEAFRSSLP*VLSCSSGASLP Trigger: TGGAAGAGATGCTCCCGAAGAGCACGACAAGACTCACGGCAATGACGATCTGAATGCTTCTATGACATCGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS GCA 72 bp | TTCAGAGAGTTCTGGAAGGCATATCGCTGGGAAATCTaGTGTCTTTCACTGGGATCCTCGAAAGGGCAGACA | + |
|
Preference number: 6 (lower is better) Translates to: FREFWKAYRWEI*CLSLGSSKGQT Trigger: TGTCTGCCCTTTCGAGGATCCCAGTGAAAGACAGCAGATTTCCCAGCGATATGCCTTCCAGAACTCTCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS GCA 72 bp | GAGATATCTACTTTACACGTGCCCAGTCGCTCCTCATaGTTTTTGCTGTCCTTTCCCCACACTTCAATGTCC | + |
|
Preference number: 6 (lower is better) Translates to: EISTLHVPSRSS*FLLSFPHTSMS Trigger: GGACATTGAAGTGTGGGGAAAGGACAGCAAAAAGCATGAGGAGCGACTGGGCACGTGTAAAGTAGATATCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS CCA 72 bp | CAGCTTGCGGCTGTCTTCCACAAAGCGTTTTTCTCTTaGAGTGAAGGTCCTGATACTTGCTTTGACCGGATT | + |
|
Preference number: 6 (lower is better) Translates to: QLAAVFHKAFFS*SEGPDTCFDRI Trigger: AATCCGGTCAAAGCAAGTATCAGGACCTTCACTCCAAGAGAAAAACGCTTTGTGGAAGACAGCCGCAAGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS CAA 90 bp | TGTCAGAGAAGTAGTGAAAGTCAAACTGTTCCTGCCACTGCGGATTaGCACTCTTACACAGTGTCTTGCTTTTGTACCTCTGCTCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: CQRSSESQTVPATAD*HSYTVSCFCTSALP Trigger: TGGGAGAGCAGAGGTACAAAAGCAAGACACTGTGTAAGAGTGCAAATCCGCAGTGGCAGGAACAGTTTGACTTTCACTACTTCTCTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS CCA 72 bp | TTCACATCCTTCAGAGAGTTCTGGAAGGCATATCGCTaGGAAATCTGCTGTCTTTCACTGGGATCCTCGAAA | + |
|
Preference number: 6 (lower is better) Translates to: FTSFREFWKAYR*EICCLSLGSSK Trigger: TTTCGAGGATCCCAGTGAAAGACAGCAGATTTCCCAGCGATATGCCTTCCAGAACTCTCTGAAGGATGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS GCA 72 bp | GTAGTGAAAGTCAAACTGTTCCTGCCACTGCGGATTTaGACTCTTACACAGTGTCTTGCTTTTGTACCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: VVKVKLFLPLRI*TLTQCLAFVPL Trigger: CAGAGGTACAAAAGCAAGACACTGTGTAAGAGTGCAAATCCGCAGTGGCAGGAACAGTTTGACTTTCACTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS CCA 72 bp | TCCAAGAGAGTTATACTTATAATCCCATTCCAGAGTTaGTTCTTCCGAAGGGACTCTGAGAGGCGTAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SKRVILIIPFQS*FFRRDSERRRL Trigger: CAACCTACGCCTCTCAGAGTCCCTTCGGAAGAACCAACTCTGGAATGGGATTATAAGTATAACTCTCTTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS GCA 72 bp | GGTTTTTGTAAATGGTATGTGTCTGAAGTCGGTCATTaGCCAACTCCAATAGGCAGAAAGGATCACTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GFCKWYVSEVGH*PTPIGRKDHSS Trigger: GGAAGAGTGATCCTTTCTGCCTATTGGAGTTGGGCAATGACCGACTTCAGACACATACCATTTACAAAAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS CAA 72 bp | AGTAGTGAAAGTCAAACTGTTCCTGCCACTGCGGATTaGCACTCTTACACAGTGTCTTGCTTTTGTACCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSESQTVPATAD*HSYTVSCFCTS Trigger: AGAGGTACAAAAGCAAGACACTGTGTAAGAGTGCAAATCCGCAGTGGCAGGAACAGTTTGACTTTCACTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS CAA 72 bp | TCCAAAGGTTTGCTTGGGCTCTTTTTAGCCTTCTTCTaGCTTAGGTTGATTAACAAAGGTCTGGTTCGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: SKGLLGLFLAFF*LRLINKGLVRC Trigger: ACAGCGAACCAGACCTTTGTTAATCAACCTAAGCAAGAAGAAGGCTAAAAAGAGCCCAAGCAAACCTTTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS CAA 72 bp | ACACCTTCACACGGAGCTTTTGATCAAGGCTTTGTATaGGCAACACAACTATCTCATCCCAAATTGGGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: TPSHGAFDQGFV*ATQLSHPKLGS Trigger: TGAACCCAATTTGGGATGAGATAGTTGTGTTGCCAATACAAAGCCTTGATCAAAAGCTCCGTGTGAAGGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS TCA 72 bp | GTTAAGTCTCGATCATACACCTTCACACGGAGCTTTTaGTCAAGGCTTTGTATTGGCAACACAACTATCTCA | + |
|
Preference number: 6 (lower is better) Translates to: VKSRSYTFTRSF*SRLCIGNTTIS Trigger: TGAGATAGTTGTGTTGCCAATACAAAGCCTTGATCAAAAGCTCCGTGTGAAGGTGTATGATCGAGACTTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS GCA 72 bp | TCACTGGCTTCTCCAAGAGTAGATTCTTCTTCAAAATaGTGCGATGTCATAGAAGCATTCAGATCGTCATTG | + |
|
Preference number: 6 (lower is better) Translates to: SLASPRVDSSSK*CDVIEAFRSSL Trigger: CAATGACGATCTGAATGCTTCTATGACATCGCAGCATTTTGAAGAAGAATCTACTCTTGGAGAAGCCAGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS CAA 72 bp | ATCATACACCTTCACACGGAGCTTTTGATCAAGGCTTaGTATTGGCAACACAACTATCTCATCCCAAATTGG | + |
|
Preference number: 6 (lower is better) Translates to: IIHLHTELLIKA*YWQHNYLIPNW Trigger: CCAATTTGGGATGAGATAGTTGTGTTGCCAATACAAAGCCTTGATCAAAAGCTCCGTGTGAAGGTGTATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS CAA 72 bp | GTACTCCTTAATGTAGACTCCCATTGGAAGCAGCTTTaGAAGAACTGTACTGTGTTCCATATTGCCAAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: VLLNVDSHWKQL*KNCTVFHIAKV Trigger: CACTTTGGCAATATGGAACACAGTACAGTTCTTCAAAAGCTGCTTCCAATGGGAGTCTACATTAAGGAGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079323.8 ENSMUST00000205410.2 |
||
| CDS CAA 90 bp | CTCGATCATACACCTTCACACGGAGCTTTTGATCAAGGCTTTGTATaGGCAACACAACTATCTCATCCCAAATTGGGTTCAAGTTCTTAT | + |
|
Preference number: 6 (lower is better) Translates to: LDHTPSHGAFDQGFV*ATQLSHPKLGSSSY Trigger: ATAAGAACTTGAACCCAATTTGGGATGAGATAGTTGTGTTGCCAATACAAAGCCTTGATCAAAAGCTCCGTGTGAAGGTGTATGATCGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS GCA 72 bp | GAAGCAGCTTTTGAAGAACTGTACTGTGTTCCATATTaGCAAAGTGAGTCTTTTTACACGGTCTACATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: EAAFEELYCVPY*QSESFYTVYIS Trigger: AGAGATGTAGACCGTGTAAAAAGACTCACTTTGGCAATATGGAACACAGTACAGTTCTTCAAAAGCTGCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS CAA 90 bp | ACCCTTAAATCCAAAGGTTTGCTTGGGCTCTTTTTAGCCTTCTTCTaGCTTAGGTTGATTAACAAAGGTCTGGTTCGCTGTTTTAATGAT | + |
|
Preference number: 6 (lower is better) Translates to: TLKSKGLLGLFLAFF*LRLINKGLVRCFND Trigger: ATCATTAAAACAGCGAACCAGACCTTTGTTAATCAACCTAAGCAAGAAGAAGGCTAAAAAGAGCCCAAGCAAACCTTTGGATTTAAGGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS GCA 72 bp | GAAGCAGCTTTTGAAGAACTGTACTGTGTTCCATATTaGCAAAGTGAGTCTTTTTACACGGTCTACATATGT | + |
|
Preference number: 6 (lower is better) Translates to: EAAFEELYCVPY*QSESFYTVYIC Trigger: ACATATGTAGACCGTGTAAAAAGACTCACTTTGGCAATATGGAACACAGTACAGTTCTTCAAAAGCTGCTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205410.2 |
||
| CDS CCA 72 bp | ACAAATGCTATTGTACTCCTTAATGTAGACTCCCATTaGAAGCAGCTTTTGAAGAACTGTACTGTGTTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: TNAIVLLNVDSH*KQLLKNCTVFH Trigger: ATGGAACACAGTACAGTTCTTCAAAAGCTGCTTCCAATGGGAGTCTACATTAAGGAGTACAATAGCATTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079323.8 ENSMUST00000205410.2 |
||
| CDS CAA 72 bp | TTGCTTGGGCTCTTTTTAGCCTTCTTCTTGCTTAGGTaGATTAACAAAGGTCTGGTTCGCTGTTTTAATGAT | + |
|
Preference number: 6 (lower is better) Translates to: LLGLFLAFFLLR*INKGLVRCFND Trigger: ATCATTAAAACAGCGAACCAGACCTTTGTTAATCAACCTAAGCAAGAAGAAGGCTAAAAAGAGCCCAAGCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
||
| CDS CAA 90 bp | AATGCTATTGTACTCCTTAATGTAGACTCCCATTGGAAGCAGCTTTaGAAGAACTGTACTGTGTTCCATATTGCCAAAGTGAGTCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: NAIVLLNVDSHWKQL*KNCTVFHIAKVSLF Trigger: AAAAAGACTCACTTTGGCAATATGGAACACAGTACAGTTCTTCAAAAGCTGCTTCCAATGGGAGTCTACATTAAGGAGTACAATAGCATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079323.8 ENSMUST00000205410.2 |
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| CDS CAA 90 bp | ATCTCATCCCAAATTGGGTTCAAGTTCTTATATATCACTTTACTTTaGTACAGTGTCTTCCCATTCAGCTTAAATTTCACATACGGATCG | + |
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Preference number: 6 (lower is better) Translates to: ISSQIGFKFLYITLL*YSVFPFSLNFTYGS Trigger: CGATCCGTATGTGAAATTTAAGCTGAATGGGAAGACACTGTACAAAAGTAAAGTGATATATAAGAACTTGAACCCAATTTGGGATGAGAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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| CDS CAA 72 bp | GGCTTTGTATTGGCAACACAACTATCTCATCCCAAATaGGGTTCAAGTTCTTATATATCACTTTACTTTTGT | + |
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Preference number: 6 (lower is better) Translates to: GFVLATQLSHPK*GSSSYISLYFC Trigger: ACAAAAGTAAAGTGATATATAAGAACTTGAACCCAATTTGGGATGAGATAGTTGTGTTGCCAATACAAAGCC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079323.8 |
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