Pregenerated sensors for MCTP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021596Ensembl transcript IDs: ENSMUST00000109583.9, ENSMUST00000109589.3, ENSMUST00000125209.8, ENSMUST00000126960.8
Found 181 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTGTAGACCCTGTTGTGCACATAGTAGAGACTGGATGCTGCGAATaGGGCTGGAGAGTGATTGGAGGACAGCAAGAGAATGGTCTGAGT | + |
|
Preference number: 1 (lower is better) Translates to: FVDPVVHIVETGCCE*GWRVIGGQQENGLS Trigger: ACTCAGACCATTCTCTTGCTGTCCTCCAATCACTCTCCAGCCTCATTCGCAGCATCCAGTCTCTACTATGTGCACAACAGGGTCTACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| 3UTR TCA 90 bp | CATATCTTTAGACGGATATGGAAAGCTCTTGTTCTGGGAGTGAGATaGGGTACTGAGGGAGAATTGTCCTCAAGGAGCCATGACAGAACA | + |
|
Preference number: 1 (lower is better) Translates to: HIFRRIWKALVLGVR*GTEGELSSRSHDRT Trigger: TGTTCTGTCATGGCTCCTTGAGGACAATTCTCCCTCAGTACCTCATCTCACTCCCAGAACAAGAGCTTTCCATATCCGTCTAAAGATATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| 3UTR TCA 90 bp | CCTTACATATCTTTAGACGGATATGGAAAGCTCTTGTTCTGGGAGTaGGATGAGGTACTGAGGGAGAATTGTCCTCAAGGAGCCATGACA | + |
|
Preference number: 1 (lower is better) Translates to: PYISLDGYGKLLFWE*DEVLRENCPQGAMT Trigger: TGTCATGGCTCCTTGAGGACAATTCTCCCTCAGTACCTCATCTCACTCCCAGAACAAGAGCTTTCCATATCCGTCTAAAGATATGTAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| 3UTR TCA 90 bp | TGTGATTCCACTAACAAGTCAGTGAAGACATCCTCACCACCCACATaGCCTCTGCAGAGGTATATTCCCTTGATAGACCCTGGAATTAGT | + |
|
Preference number: 1 (lower is better) Translates to: CDSTNKSVKTSSPPT*PLQRYIPLIDPGIS Trigger: ACTAATTCCAGGGTCTATCAAGGGAATATACCTCTGCAGAGGTCATGTGGGTGGTGAGGATGTCTTCACTGACTTGTTAGTGGAATCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| 3UTR TCA 90 bp | TGTCTGCAGCAATTATCATTGAGTGTGATTCCACTAACAAGTCAGTaGAGACATCCTCACCACCCACATGACCTCTGCAGAGGTATATTC | + |
|
Preference number: 1 (lower is better) Translates to: CLQQLSLSVIPLTSQ*RHPHHPHDLCRGIF Trigger: GAATATACCTCTGCAGAGGTCATGTGGGTGGTGAGGATGTCTTCACTGACTTGTTAGTGGAATCACACTCAATGATAATTGCTGCAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGAAGGAAGGGTTTGGTCCAAGTTCAACAACCTTGTTCTGTCTGAGCATACTATTAGCCCAGCTTCCATaGAGGGGGCAGGAGCAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: QKEGFGPSSTTLFCLSILLAQLP*RGQEQA Trigger: AGCCTGCTCCTGCCCCCTCCATGGAAGCTGGGCTAA...TAGTATGCTCAGACAGAACAAGGTTGTTGAACTTGGACCAAACCCTTCCTTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126960.8 |
||
| 3UTR-3UTR GCA 90 bp | GGAGCAAAAGGAAAATGGTCAGAAGGAAGGGTTTGGTCCAAGTTCAACAACCTTGTAGAATGGCGTGGCTaGTGCCACAGTCTGCATGGA | + |
|
Preference number: 2 (lower is better) Translates to: GAKGKWSEGRVWSKFNNLVEWRG*CHSLHG Trigger: TCCATGCAGACTGTGGCAGCAGCCACGCCATTCTAC...AAGGTTGTTGAACTTGGACCAAACCCTTCCTTCTGACCATTTTCCTTTTGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126960.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAACAGAATGTTTATGGCCCTCTGTCTGGAGTTGTCCCTGCCCCAGTTCATCAAGGCTGGAGAGTGATTaGAGGACAGCAAGAGAATGG | + |
|
Preference number: 2 (lower is better) Translates to: KTECLWPSVWSCPCPSSSRLESD*RTAREW Trigger: CCATTCTCTTGCTGTCCTCCAATCACTCTCCAGCCT...TGATGAACTGGGGCAGGGACAACTCCAGACAGAGGGCCATAAACATTCTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| 3UTR-3UTR GCA 90 bp | TATGTTAAGTTGAAGTGCAACATTTCTATTATTCAAGCTTTGGGGTTTCCCCCGAAAGAGAGGAAGGGCTaGGGAGGCTGCGGAGGAGTT | + |
|
Preference number: 2 (lower is better) Translates to: YVKLKCNISIIQALGFPPKERKG*GGCGGV Trigger: AACTCCTCCGCAGCCTCCGCAGCCCTTCCTCTCTTT...CGGGGGAAACCCCAAAGCTTGAATAATAGAAATGTTGCACTTCAACTTAACATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| 3UTR-3UTR CCA 90 bp | AAATATTCAGCAACTTTCTCCAGTATGTGCCTTTTGAGTCCTGGTCTTTTGGTGTTATGGCCCTCTGTCTaGAGTTGTCCCTGCCCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: KYSATFSSMCLLSPGLLVLWPSV*SCPCPS Trigger: ACTGGGGCAGGGACAACTCCAGACAGAGGGCCATAA...CACCAAAAGACCAGGACTCAAAAGGCACATACTGGAGAAAGTTGCTGAATATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| 3UTR-3UTR TCA 90 bp | AAATATTCAGCAACTTTCTCCAGTATGTGCCTTTTGAGTCCTGGTCTTTTGGTGACTGGATGCTGCGAATaGGGCTGGAGAGTGATTGGA | + |
|
Preference number: 2 (lower is better) Translates to: KYSATFSSMCLLSPGLLVTGCCE*GWRVIG Trigger: TCCAATCACTCTCCAGCCTCATTCGCAGCATCCAGT...CACCAAAAGACCAGGACTCAAAAGGCACATACTGGAGAAAGTTGCTGAATATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| 3UTR-3UTR CCA 90 bp | AAAACAGAATGTTTATGGCCCTCTGTCTGGAGTTGTCCCTGCCCCAGTTCATCAAATGATGAAACTTTGTaGTACAGCTTGGAAGGGGAT | + |
|
Preference number: 2 (lower is better) Translates to: KTECLWPSVWSCPCPSSSNDETL*YSLEGD Trigger: ATCCCCTTCCAAGCTGTACCACAAAGTTTCATCATT...TGATGAACTGGGGCAGGGACAACTCCAGACAGAGGGCCATAAACATTCTGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| 3UTR-3UTR GCA 90 bp | TGTTGTGCACATAGTAGAGACTGGATGCTGCGAATGAGGCTGGAGAGTGATTGGAAGCATTGCATGATTTaGTTAAAGATTATGAGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: CCAHSRDWMLRMRLESDWKHCMI*LKIMRR Trigger: CCTCCTCATAATCTTTAAGCAAATCATGCAATGCTT...CCAATCACTCTCCAGCCTCATTCGCAGCATCCAGTCTCTACTATGTGCACAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| 3UTR-3UTR CCA 90 bp | GACCACAGTGAATTCCAGAAAATATTCAGCAACTTTCTCCAGTATGTGCCTTTTAGGACAGCAAGAGAATaGTCTGAGTGCTCTGCACCA | + |
|
Preference number: 2 (lower is better) Translates to: DHSEFQKIFSNFLQYVPFRTARE*SECSAP Trigger: TGGTGCAGAGCACTCAGACCATTCTCTTGCTGTCCT...AAAAGGCACATACTGGAGAAAGTTGCTGAATATTTTCTGGAATTCACTGTGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| 3UTR-3UTR TCA 90 bp | GTTCAGTTTCATCTTGATATTTCGTTCAAGAGTGGTACTATCACCAAAGGTACTAATGAGGCTGGAGAGTaGTTGGAGGACAGCAAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: VQFHLDISFKSGTITKGTNEAGE*LEDSKR Trigger: TCTCTTGCTGTCCTCCAATCACTCTCCAGCCTCATT...AGTACCTTTGGTGATAGTACCACTCTTGAACGAAATATCAAGATGAAACTGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| 3UTR-3UTR TCA 90 bp | GTTCAGTTTCATCTTGATATTTCGTTCAAGAGTGGTACTATCACCAAAGGTACTGTTCTGGGAGTGAGATaGGGTACTGAGGGAGAATTG | + |
|
Preference number: 2 (lower is better) Translates to: VQFHLDISFKSGTITKGTVLGVR*GTEGEL Trigger: CAATTCTCCCTCAGTACCTCATCTCACTCCCAGAAC...AGTACCTTTGGTGATAGTACCACTCTTGAACGAAATATCAAGATGAAACTGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| 3UTR-3UTR GCA 90 bp | AGTGAAGACATCCTCACCACCCACATGACCTCTGCAGAGGTATATTCCCTTGATCAAAACAGGTTTTCATaGGTTATCAATGATCTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: SEDILTTHMTSAEVYSLDQNRFS*VINDLP Trigger: AGGAAGATCATTGATAACGCATGAAAACCTGTTTTG...ATCAAGGGAATATACCTCTGCAGAGGTCATGTGGGTGGTGAGGATGTCTTCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTGGTGAATTATCTCTTTGTTGTCAGCAGTCTAAGAACTGGAAAGTAGCTAACGCACATAGTAGAGACTaGATGCTGCGAATGAGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: FGELSLCCQQSKNWKVANAHSRD*MLRMRL Trigger: CAGCCTCATTCGCAGCATCCAGTCTCTACTATGTGC...GTTAGCTACTTTCCAGTTCTTAGACTGCTGACAACAAAGAGATAATTCACCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| 3UTR-3UTR GCA 90 bp | TCTGATAGTTCGGTTCTTTCCCTTGTGATTGGAAAAATGTATATCTTCCAGTTTAAGGGCTGCGGAGGCTaGGGAGGAGTTTTTCTTTTA | + |
|
Preference number: 2 (lower is better) Translates to: SDSSVLSLVIGKMYIFQFKGCGG*GGVFLL Trigger: TAAAAGAAAAACTCCTCCGCAGCCTCCGCAGCCCTT...AAACTGGAAGATATACATTTTTCCAATCACAAGGGAAAGAACCGAACTATCAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| 3UTR CAA 90 bp | TATTCAGCAACTTTCTCCAGTATGTGCCTTTTGAGTCCTGGTCTTTaGGTGAATTATCTCTTTGTTGTCAGCAGTCTAAGAACTGGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: YSATFSSMCLLSPGL*VNYLFVVSSLRTGK Trigger: CTTTCCAGTTCTTAGACTGCTGACAACAAAGAGATAATTCACCAAAAGACCAGGACTCAAAAGGCACATACTGGAGAAAGTTGCTGAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| 3UTR-3UTR GCA 90 bp | TCTGATAGTTCGGTTCTTTCCCTTGTGATTGGAAAAATGTATATCTTCCAGTTTTTATCTTCCCAAACATaGTGCTTTCCTCGGAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: SDSSVLSLVIGKMYIFQFLSSQT*CFPRSW Trigger: CCAGCTCCGAGGAAAGCAGCATGTTTGGGAAGATAA...AAACTGGAAGATATACATTTTTCCAATCACAAGGGAAAGAACCGAACTATCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| 3UTR-3UTR CCA 90 bp | AAATATTCAGCAACTTTCTCCAGTATGTGCCTTTTGAGTCCTGGTCTTTTGGTGATCTTTAGACGGATATaGAAAGCTCTTGTTCTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: KYSATFSSMCLLSPGLLVIFRRI*KALVLG Trigger: TCCCAGAACAAGAGCTTTCCATATCCGTCTAAAGAT...CACCAAAAGACCAGGACTCAAAAGGCACATACTGGAGAAAGTTGCTGAATATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| 3UTR CAA 90 bp | GTGAATTCCAGAAAATATTCAGCAACTTTCTCCAGTATGTGCCTTTaGAGTCCTGGTCTTTTGGTGAATTATCTCTTTGTTGTCAGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: VNSRKYSATFSSMCL*SPGLLVNYLFVVSS Trigger: ACTGCTGACAACAAAGAGATAATTCACCAAAAGACCAGGACTCAAAAGGCACATACTGGAGAAAGTTGCTGAATATTTTCTGGAATTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| 3UTR-3UTR CCA 90 bp | AGGAGCCCTGTAGTAAAGAACTTAGCAAATGGATTTCAAATCATAGAGCTTAAGAGCAGGCTCAAATGTTaGTTACTACATTGGAGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: RSPVVKNLANGFQIIELKSRLKC*LLHWSR Trigger: TCTGCTCCAATGTAGTAACCAACATTTGAGCCTGCT...CTTAAGCTCTATGATTTGAAATCCATTTGCTAAGTTCTTTACTACAGGGCTCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126960.8 |
||
| 3UTR-3UTR CCA 90 bp | AATGAAAACACTGGCCTTTCACTTAGCCAACTGCACTCTCCATTAAAACTCACTGCCATTTACGTTTTATaGAAAGTGAACCAGAGCATA | + |
|
Preference number: 2 (lower is better) Translates to: NENTGLSLSQLHSPLKLTAIYVL*KVNQSI Trigger: TATGCTCTGGTTCACTTTCCATAAAACGTAAATGGC...AGTGAGTTTTAATGGAGAGTGCAGTTGGCTAAGTGAAAGGCCAGTGTTTTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| 3UTR CCA 72 bp | ATTGGAGCAGACTGTGAGATGAGGAGAAGAGTAGAATaGCGTGGCTGCTGCCACAGTCTGCATGGAAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: IGADCEMRRRVE*RGCCHSLHGSR Trigger: CCTGCTTCCATGCAGACTGTGGCAGCAGCCACGCCATTCTACTCTTCTCCTCATCTCACAGTCTGCTCCAAT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126960.8 |
||
| 3UTR CCA 72 bp | AGAGACTGGATGCTGCGAATGAGGCTGGAGAGTGATTaGAGGACAGCAAGAGAATGGTCTGAGTGCTCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: RDWMLRMRLESD*RTAREWSECSA Trigger: TGCAGAGCACTCAGACCATTCTCTTGCTGTCCTCCAATCACTCTCCAGCCTCATTCGCAGCATCCAGTCTCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| 3UTR CCA 72 bp | CAAGAAGTGCTAAGGGTAGAGTTAGCCCAGCTTCCATaGAGGGGGCAGGAGCAGGCTCAAATGTTGGTTACT | + |
|
Preference number: 3 (lower is better) Translates to: QEVLRVELAQLP*RGQEQAQMLVT Trigger: AGTAACCAACATTTGAGCCTGCTCCTGCCCCCTCCATGGAAGCTGGGCTAACTCTACCCTTAGCACTTCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126960.8 |
||
| 3UTR GCA 72 bp | ACAGAATGTTTATGGCCCTCTGTCTGGAGTTGTCCCTaGCCCAGTTCATCACTTCCATTCTGGAGCAGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: TECLWPSVWSCP*PSSSLPFWSRV Trigger: CACTCTGCTCCAGAATGGAAGTGATGAACTGGGGCAGGGACAACTCCAGACAGAGGGCCATAAACATTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| 3UTR TCA 72 bp | CCTGTTGTGCACATAGTAGAGACTGGATGCTGCGAATaGGGCTGGAGAGTGATTGGAGGACAGCAAGAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: PVVHIVETGCCE*GWRVIGGQQEN Trigger: ATTCTCTTGCTGTCCTCCAATCACTCTCCAGCCTCATTCGCAGCATCCAGTCTCTACTATGTGCACAACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| 3UTR-3UTR CAA 90 bp | AAAACAGAATGTTTATGGCCCTCTGTCTGGAGTTGTCCCTGCCCCAGTTCATCAGGGGATGGGAAGGATTaGGAAAAGCAGCTAACAGTC | + |
|
Preference number: 3 (lower is better) Translates to: KTECLWPSVWSCPCPSSSGDGKD*EKQLTV Trigger: GACTGTTAGCTGCTTTTCCAAATCCTTCCCATCCCC...TGATGAACTGGGGCAGGGACAACTCCAGACAGAGGGCCATAAACATTCTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| 3UTR TCA 72 bp | CCTGCCCCAGTTCATCACTTCCATTCTGGAGCAGAGTaGTTTTGTAGACCCTGTTGTGCACATAGTAGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: PAPVHHFHSGAE*FCRPCCAHSRD Trigger: GTCTCTACTATGTGCACAACAGGGTCTACAAAATCACTCTGCTCCAGAATGGAAGTGATGAACTGGGGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| 3UTR TCA 72 bp | AGACGGATATGGAAAGCTCTTGTTCTGGGAGTGAGATaGGGTACTGAGGGAGAATTGTCCTCAAGGAGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: RRIWKALVLGVR*GTEGELSSRSH Trigger: ATGGCTCCTTGAGGACAATTCTCCCTCAGTACCTCATCTCACTCCCAGAACAAGAGCTTTCCATATCCGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTGGTGAATTATCTCTTTGTTGTCAGCAGTCTAAGAACTGGAAAGTAGCTAACGCCCTCTGTCTGGAGTaGTCCCTGCCCCAGTTCATC | + |
|
Preference number: 3 (lower is better) Translates to: FGELSLCCQQSKNWKVANALCLE*SLPQFI Trigger: GATGAACTGGGGCAGGGACAACTCCAGACAGAGGGC...GTTAGCTACTTTCCAGTTCTTAGACTGCTGACAACAAAGAGATAATTCACCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| 3UTR TCA 72 bp | TCTTTAGACGGATATGGAAAGCTCTTGTTCTGGGAGTaGGATGAGGTACTGAGGGAGAATTGTCCTCAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SLDGYGKLLFWE*DEVLRENCPQG Trigger: TCCTTGAGGACAATTCTCCCTCAGTACCTCATCTCACTCCCAGAACAAGAGCTTTCCATATCCGTCTAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| 3UTR CCA 72 bp | CCAGGAGCAAAAGGAAAATGGTCAGAAGGAAGGGTTTaGTCCAAGTTCAACAACCTTGTTCTGTCTGAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: PGAKGKWSEGRV*SKFNNLVLSEH Trigger: ATGCTCAGACAGAACAAGGTTGTTGAACTTGGACCAAACCCTTCCTTCTGACCATTTTCCTTTTGCTCCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126960.8 |
||
| 3UTR-3UTR CAA 90 bp | AAATATTCAGCAACTTTCTCCAGTATGTGCCTTTTGAGTCCTGGTCTTTTGGTGGGCAATGATGAAACTTaGTGGTACAGCTTGGAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: KYSATFSSMCLLSPGLLVGNDET*WYSLEG Trigger: CCCTTCCAAGCTGTACCACAAAGTTTCATCATTGCC...CACCAAAAGACCAGGACTCAAAAGGCACATACTGGAGAAAGTTGCTGAATATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| 3UTR-3UTR CAA 90 bp | GTAAAAAGTATTTGTTGTGCACCTAGGGACCCAGTTTCAATCCCTGAAACACATACAGAACCCACAGTGTaGTCCTCTGAATTTGACATG | + |
|
Preference number: 3 (lower is better) Translates to: VKSICCAPRDPVSIPETHTEPTV*SSEFDM Trigger: CATGTCAAATTCAGAGGACAACACTGTGGGTTCTGT...ATGTGTTTCAGGGATTGAAACTGGGTCCCTAGGTGCACAACAAATACTTTTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126960.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGAGCCCTGTAGTAAAGAACTTAGCAAATGGATTTCAAATCATAGAGCTTAAGGAGCAGGCTCAAATGTaGGTTACTACATTGGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RSPVVKNLANGFQIIELKEQAQM*VTTLEQ Trigger: CTGCTCCAATGTAGTAACCAACATTTGAGCCTGCTC...CTTAAGCTCTATGATTTGAAATCCATTTGCTAAGTTCTTTACTACAGGGCTCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126960.8 |
||
| 3UTR GCA 72 bp | ACAGGAGTGGAAGTCGTGATGTATGTTAAGTTGAAGTaGAACATTTCTATTATTCAAGCTTTGGGGTTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: TGVEVVMYVKLK*NISIIQALGFP Trigger: GGGAAACCCCAAAGCTTGAATAATAGAAATGTTGCACTTCAACTTAACATACATCACGACTTCCACTCCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| 3UTR CCA 72 bp | CCACAGTGTTGTCCTCTGAATTTGACATGTGTGCTGTaGCATATGCACAAACATAAACTGCATCATATAACA | + |
|
Preference number: 3 (lower is better) Translates to: PQCCPLNLTCVL*HMHKHKLHHIT Trigger: TGTTATATGATGCAGTTTATGTTTGTGCATATGCCACAGCACACATGTCAAATTCAGAGGACAACACTGTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126960.8 |
||
| 3UTR TCA 72 bp | TATCTCACTGAAGTTGCAGTAATCTCTACCGCTCTTTaGGCCTTTACAAAACAGCTAACAACAATAATGACA | + |
|
Preference number: 3 (lower is better) Translates to: YLTEVAVISTAL*AFTKQLTTIMT Trigger: TGTCATTATTGTTGTTAGCTGTTTTGTAAAGGCTCAAAGAGCGGTAGAGATTACTGCAACTTCAGTGAGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126960.8 |
||
| 3UTR TCA 72 bp | AGTCATCTGTTAATGGTTGCATCCACTAGGTATATCTaGGGTTATAGATTGTCAGGCTTATCGACATTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: SHLLMVASTRYI*GYRLSGLSTFE Trigger: TTCAAATGTCGATAAGCCTGACAATCTATAACCTCAGATATACCTAGTGGATGCAACCATTAACAGATGACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| 3UTR TCA 72 bp | CATTTACGTTTTATGGAAAGTGAACCAGAGCATAATTaGGCATTTTATCTGATAGTTCGGTTCTTTCCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: HLRFMESEPEHN*AFYLIVRFFPL Trigger: CAAGGGAAAGAACCGAACTATCAGATAAAATGCTCAATTATGCTCTGGTTCACTTTCCATAAAACGTAAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| 3UTR TCA 72 bp | TTCAAAGCACAGTCATATAAAAGTTCAGTTTCATCTTaGTATTTCGTTCAAGAGTGGTACTATCACCAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: FKAQSYKSSVSS*YFVQEWYYHQR Trigger: CCTTTGGTGATAGTACCACTCTTGAACGAAATATCAAGATGAAACTGAACTTTTATATGACTGTGCTTTGAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| 3UTR TCA 72 bp | AACTTAGCAAATGGATTTCAAATCATAGAGCTTAAGTaGTTTATACAAGAAGTGCTAAGGGTAGAGTTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: NLANGFQIIELK*FIQEVLRVELA Trigger: GGCTAACTCTACCCTTAGCACTTCTTGTATAAATCACTTAAGCTCTATGATTTGAAATCCATTTGCTAAGTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126960.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTGCAGAGGTATATTCCCTTGATAGACCCTGGAATTAGTTTTAGGAATGCAGGCGGCGGCGCAGCGTaGACCCTTGCTCGGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PLQRYIPLIDPGISFRNAGGGAA*TLARLC Trigger: GCAGAGCCGAGCAAGGGTCCACGCTGCGCCGCCGCC...TGCATTCCTAAAACTAATTCCAGGGTCTATCAAGGGAATATACCTCTGCAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR CCA 90 bp | GAGAAGAGTAGAATGGCGTGGCTGCTGCCACAGTCTGCATGGAAGCAGGTGGCGAGTGTGATATCCAACTaGTACATTCCGGGATCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: EKSRMAWLLPQSAWKQVASVISN*YIPGSA Trigger: GGCTGATCCCGGAATGTACCAGTTGGATATCACACT...CGCCACCTGCTTCCATGCAGACTGTGGCAGCAGCCACGCCATTCTACTCTTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126960.8 |
||
| CDS-3UTR CCA 90 bp | AATGAAAACACTGGCCTTTCACTTAGCCAACTGCACTCTCCATTAAAACTCACTGGGACGGGGTCGGAGTaGCCGCAGTGCGGTGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: NENTGLSLSQLHSPLKLTGTGSE*PQCGAR Trigger: CCGAGCACCGCACTGCGGCCACTCCGACCCCGTCCC...AGTGAGTTTTAATGGAGAGTGCAGTTGGCTAAGTGAAAGGCCAGTGTTTTCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR TCA 90 bp | GAGAAGAGTAGAATGGCGTGGCTGCTGCCACAGTCTGCATGGAAGCAGGTGGCGGACCCCTTCTTAGTGTaGTATCCAACTGGTACATTC | + |
|
Preference number: 4 (lower is better) Translates to: EKSRMAWLLPQSAWKQVADPFLV*YPTGTF Trigger: GAATGTACCAGTTGGATATCACACTAAGAAGGGGTC...CGCCACCTGCTTCCATGCAGACTGTGGCAGCAGCCACGCCATTCTACTCTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126960.8 |
||
| CDS-3UTR GCA 90 bp | GAGAAGAGTAGAATGGCGTGGCTGCTGCCACAGTCTGCATGGAAGCAGGTGGCGAGCCAAAGGGACATCTaGATTACTGTTTCCAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: EKSRMAWLLPQSAWKQVASQRDI*ITVSNC Trigger: ACAGTTGGAAACAGTAATGCAGATGTCCCTTTGGCT...CGCCACCTGCTTCCATGCAGACTGTGGCAGCAGCCACGCCATTCTACTCTTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126960.8 |
||
| CDS-3UTR GCA 90 bp | AATGAAAACACTGGCCTTTCACTTAGCCAACTGCACTCTCCATTAAAACTCACTTTGCTCGGCTCTGCCTaGTCCGCCTGGCTCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NENTGLSLSQLHSPLKLTLLGSA*SAWLQG Trigger: CCCCTGGAGCCAGGCGGAGCAGGCAGAGCCGAGCAA...AGTGAGTTTTAATGGAGAGTGCAGTTGGCTAAGTGAAAGGCCAGTGTTTTCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR CCA 90 bp | CTTATTCATAGACTCTCAGATTCTCTTAAGGGATTATGTGTGTATGCAGACAGGTTCCAGAGCCGGGCCTaGAAGGAGGGGGACGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LIHRLSDSLKGLCVYADRFQSRA*KEGDAA Trigger: GGCCGCGTCCCCCTCCTTCCAGGCCCGGCTCTGGAA...CCTGTCTGCATACACACATAATCCCTTAAGAGAATCTGAGAGTCTATGAATAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR GCA 90 bp | CCTCTGCAGAGGTATATTCCCTTGATAGACCCTGGAATTAGTTTTAGGAATGCACGCTCTATGTCCTTCTaGAGAGCCTGGGGTTCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PLQRYIPLIDPGISFRNARSMSF*RAWGSA Trigger: CGCCGAACCCCAGGCTCTGCAGAAGGACATAGAGCG...TGCATTCCTAAAACTAATTCCAGGGTCTATCAAGGGAATATACCTCTGCAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR TCA 90 bp | AATGAAAACACTGGCCTTTCACTTAGCCAACTGCACTCTCCATTAAAACTCACTCCGAGGCTGTCAGAGTaGCAAGCAGAACCAGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NENTGLSLSQLHSPLKLTPRLSE*QAEPGG Trigger: GCCACCTGGTTCTGCTTGTCACTCTGACAGCCTCGG...AGTGAGTTTTAATGGAGAGTGCAGTTGGCTAAGTGAAAGGCCAGTGTTTTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR TCA 90 bp | AGTGAAGACATCCTCACCACCCACATGACCTCTGCAGAGGTATATTCCCTTGATGGTCCTCCATGGAATTaGCAGAGAGGTCAGAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: SEDILTTHMTSAEVYSLDGPPWN*QRGQRY Trigger: GTATCTCTGACCTCTCTGTCAATTCCATGGAGGACC...ATCAAGGGAATATACCTCTGCAGAGGTCATGTGGGTGGTGAGGATGTCTTCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR TCA 90 bp | CAGAAGGAAGGGTTTGGTCCAAGTTCAACAACCTTGTTCTGTCTGAGCATACTATGGCTGCAGCCTGGATaGAAGACTGGACTGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QKEGFGPSSTTLFCLSILWLQPG*KTGLLL Trigger: AAGCAGCAGTCCAGTCTTTCATCCAGGCTGCAGCCA...TAGTATGCTCAGACAGAACAAGGTTGTTGAACTTGGACCAAACCCTTCCTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126960.8 |
||
| CDS-3UTR TCA 90 bp | AATGAAAACACTGGCCTTTCACTTAGCCAACTGCACTCTCCATTAAAACTCACTCTTGCTTCCGCTTCTTaGAGCCGCTCCACCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NENTGLSLSQLHSPLKLTLASAS*SRSTCC Trigger: GCAGCAGGTGGAGCGGCTTCAAGAAGCGGAAGCAAG...AGTGAGTTTTAATGGAGAGTGCAGTTGGCTAAGTGAAAGGCCAGTGTTTTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR GCA 90 bp | CTTATTCATAGACTCTCAGATTCTCTTAAGGGATTATGTGTGTATGCAGACAGGTTGCCCACCCCCAGCTaGAGGTTCTTCCAGAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LIHRLSDSLKGLCVYADRLPTPS*RFFQSR Trigger: CCGGCTCTGGAAGAACCTGCAGCTGGGGGTGGGCAA...CCTGTCTGCATACACACATAATCCCTTAAGAGAATCTGAGAGTCTATGAATAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR TCA 90 bp | AAAACAGAATGTTTATGGCCCTCTGTCTGGAGTTGTCCCTGCCCCAGTTCATCACGGGCAGCTAAACTTTaGCCCCTTCTTAGTGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: KTECLWPSVWSCPCPSSSRAAKL*PLLSVI Trigger: TATCACACTAAGAAGGGGTCAAAGTTTAGCTGCCCG...TGATGAACTGGGGCAGGGACAACTCCAGACAGAGGGCCATAAACATTCTGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| CDS-3UTR TCA 90 bp | TATGTTAAGTTGAAGTGCAACATTTCTATTATTCAAGCTTTGGGGTTTCCCCCGGCACAGGTTGGGCTGTaGGGAGGAGAACACTCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: YVKLKCNISIIQALGFPPAQVGL*GGEHSV Trigger: GACCGAGTGTTCTCCTCCTCACAGCCCAACCTGTGC...CGGGGGAAACCCCAAAGCTTGAATAATAGAAATGTTGCACTTCAACTTAACATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR GCA 90 bp | CCTCTGCAGAGGTATATTCCCTTGATAGACCCTGGAATTAGTTTTAGGAATGCAACTCGGTCCAGCACTTaGTTCCGCTTCTTGAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PLQRYIPLIDPGISFRNATRSST*FRFLKP Trigger: CGGCTTCAAGAAGCGGAAGCAAGTGCTGGACCGAGT...TGCATTCCTAAAACTAATTCCAGGGTCTATCAAGGGAATATACCTCTGCAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR GCA 90 bp | TCTGATAGTTCGGTTCTTTCCCTTGTGATTGGAAAAATGTATATCTTCCAGTTTACCCTTGCTCGGCTCTaGCTGCTCCGCCTGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SDSSVLSLVIGKMYIFQFTLARL*LLRLAP Trigger: TGGAGCCAGGCGGAGCAGGCAGAGCCGAGCAAGGGT...AAACTGGAAGATATACATTTTTCCAATCACAAGGGAAAGAACCGAACTATCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCAATGATGAAACTTTGTGGTACAGCTTGGAAGGGGATGGGAAGGATTTGGAGTGTGATATCCAACTaGTACATTCCGGGATCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LAMMKLCGTAWKGMGRIWSVISN*YIPGSA Trigger: GGCTGATCCCGGAATGTACCAGTTGGATATCACACT...CCAAATCCTTCCCATCCCCTTCCAAGCTGTACCACAAAGTTTCATCATTGCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| CDS-3UTR CCA 90 bp | GGAGCAAAAGGAAAATGGTCAGAAGGAAGGGTTTGGTCCAAGTTCAACAACCTTCTCATGGCTGCAGCCTaGATGAAAGACTGGACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GAKGKWSEGRVWSKFNNLLMAAA*MKDWTA Trigger: AGCAGTCCAGTCTTTCATCCAGGCTGCAGCCATGAG...AAGGTTGTTGAACTTGGACCAAACCCTTCCTTCTGACCATTTTCCTTTTGCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126960.8 |
||
| CDS-3UTR CCA 90 bp | TCTGATAGTTCGGTTCTTTCCCTTGTGATTGGAAAAATGTATATCTTCCAGTTTCCCCTCGGGGGCGGTTaGGGAGAAGAGGACAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SDSSVLSLVIGKMYIFQFPLGGG*GEEDRE Trigger: TTCCCTGTCCTCTTCTCCCCAACCGCCCCCGAGGGG...AAACTGGAAGATATACATTTTTCCAATCACAAGGGAAAGAACCGAACTATCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCCTTTATAAGTGGTATAATGAAAACACTGGCCTTTCACTTAGCCAACTGCGAGGAGCTCTTTTGGTaGCACAGGTGCACCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSFISGIMKTLAFHLANCEELFW*HRCTPG Trigger: CCCTGGGGTGCACCTGTGCCACCAAAAGAGCTCCTC...GCAGTTGGCTAAGTGAAAGGCCAGTGTTTTCATTATACCACTTATAAAGGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR TCA 90 bp | CTGGCAATGATGAAACTTTGTGGTACAGCTTGGAAGGGGATGGGAAGGATTTGGTTAACTCCAACTGAGTaGGATCAAGAAAGGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LAMMKLCGTAWKGMGRIWLTPTE*DQERLS Trigger: GCTCAGCCTTTCTTGATCTCACTCAGTTGGAGTTAA...CCAAATCCTTCCCATCCCCTTCCAAGCTGTACCACAAAGTTTCATCATTGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| CDS-3UTR TCA 90 bp | AGTGAAGACATCCTCACCACCCACATGACCTCTGCAGAGGTATATTCCCTTGATTTAACTCCAACTGAGTaGGATCAAGAAAGGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SEDILTTHMTSAEVYSLDLTPTE*DQERLS Trigger: GCTCAGCCTTTCTTGATCTCACTCAGTTGGAGTTAA...ATCAAGGGAATATACCTCTGCAGAGGTCATGTGGGTGGTGAGGATGTCTTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR TCA 90 bp | ACATTGAAGTCCAGGAGCAAAAGGAAAATGGTCAGAAGGAAGGGTTTGGTCCAATTGCTCTTGTACTTCTaGTGGCCAAGCCGGAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: TLKSRSKRKMVRRKGLVQLLLYF*WPSRNF Trigger: GAAGTTCCGGCTTGGCCATCAGAAGTACAAGAGCAA...TTGGACCAAACCCTTCCTTCTGACCATTTTCCTTTTGCTCCTGGACTTCAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126960.8 |
||
| CDS-3UTR TCA 90 bp | AGTGAAGACATCCTCACCACCCACATGACCTCTGCAGAGGTATATTCCCTTGATGATCACTTTTACCTGTaGCATCTGCAGCCATCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SEDILTTHMTSAEVYSLDDHFYL*HLQPSN Trigger: GTTTGATGGCTGCAGATGTCACAGGTAAAAGTGATC...ATCAAGGGAATATACCTCTGCAGAGGTCATGTGGGTGGTGAGGATGTCTTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR TCA 90 bp | TCTGATAGTTCGGTTCTTTCCCTTGTGATTGGAAAAATGTATATCTTCCAGTTTAGACGAAGAAGGAGCTaGGTCCGGAGAGCGTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SDSSVLSLVIGKMYIFQFRRRRS*VRRASA Trigger: GGCGGACGCTCTCCGGACTCAGCTCCTTCTTCGTCT...AAACTGGAAGATATACATTTTTCCAATCACAAGGGAAAGAACCGAACTATCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR GCA 90 bp | TGTTGTGCACATAGTAGAGACTGGATGCTGCGAATGAGGCTGGAGAGTGATTGGAGCCAAAGGGACATCTaGATTACTGTTTCCAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: CCAHSRDWMLRMRLESDWSQRDI*ITVSNC Trigger: ACAGTTGGAAACAGTAATGCAGATGTCCCTTTGGCT...CCAATCACTCTCCAGCCTCATTCGCAGCATCCAGTCTCTACTATGTGCACAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| CDS-3UTR GCA 90 bp | AGTGAAGACATCCTCACCACCCACATGACCTCTGCAGAGGTATATTCCCTTGATTCATCTAGGATGTTCTaGACACTGACACAGACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SEDILTTHMTSAEVYSLDSSRMF*TLTQTS Trigger: GGAAGTCTGTGTCAGTGTGCAGAACATCCTAGATGA...ATCAAGGGAATATACCTCTGCAGAGGTCATGTGGGTGGTGAGGATGTCTTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR CCA 90 bp | AGTGAAGACATCCTCACCACCCACATGACCTCTGCAGAGGTATATTCCCTTGATGAAGACAGGTCAACCTaGCACCTTCCAATAAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SEDILTTHMTSAEVYSLDEDRST*HLPIKS Trigger: TGACTTTATTGGAAGGTGCCAGGTTGACCTGTCTTC...ATCAAGGGAATATACCTCTGCAGAGGTCATGTGGGTGGTGAGGATGTCTTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR CCA 90 bp | AATGAAAACACTGGCCTTTCACTTAGCCAACTGCACTCTCCATTAAAACTCACTACAAGCAGAACCAGGTaGCCCTCACCCTCTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NENTGLSLSQLHSPLKLTTSRTR*PSPSSR Trigger: TCTGGAAGAGGGTGAGGGCCACCTGGTTCTGCTTGT...AGTGAGTTTTAATGGAGAGTGCAGTTGGCTAAGTGAAAGGCCAGTGTTTTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR CCA 90 bp | AATGAAAACACTGGCCTTTCACTTAGCCAACTGCACTCTCCATTAAAACTCACTAGAGAGGAGCTCTTTTaGTGGCACAGGTGCACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NENTGLSLSQLHSPLKLTREELF*WHRCTP Trigger: TGGGGTGCACCTGTGCCACCAAAAGAGCTCCTCTCT...AGTGAGTTTTAATGGAGAGTGCAGTTGGCTAAGTGAAAGGCCAGTGTTTTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR TCA 90 bp | ATGAAACAAAACAGAATGTTTATGGCCCTCTGTCTGGAGTTGTCCCTGCCCCAGCTGTTTAACTCCAACTaGGTGAGATCAAGAAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: MKQNRMFMALCLELSLPQLFNSN*VRSRKA Trigger: AGCCTTTCTTGATCTCACTCAGTTGGAGTTAAACAG...CTGGGGCAGGGACAACTCCAGACAGAGGGCCATAAACATTCTGTTTTGTTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| CDS-3UTR CCA 90 bp | AATGAAAACACTGGCCTTTCACTTAGCCAACTGCACTCTCCATTAAAACTCACTGATGACCCCCTTTGTTaGCCCTGTCAGCTGCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: NENTGLSLSQLHSPLKLTDDPLC*PCQLLV Trigger: AACAAGCAGCTGACAGGGCCAACAAAGGGGGTCATC...AGTGAGTTTTAATGGAGAGTGCAGTTGGCTAAGTGAAAGGCCAGTGTTTTCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR TCA 90 bp | CCTCTGCAGAGGTATATTCCCTTGATAGACCCTGGAATTAGTTTTAGGAATGCACGGGCAGCTAAACTTTaGCCCCTTCTTAGTGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: PLQRYIPLIDPGISFRNARAAKL*PLLSVI Trigger: TATCACACTAAGAAGGGGTCAAAGTTTAGCTGCCCG...TGCATTCCTAAAACTAATTCCAGGGTCTATCAAGGGAATATACCTCTGCAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTGCAGAGGTATATTCCCTTGATAGACCCTGGAATTAGTTTTAGGAATGCAAGTGTGATATCCAACTaGTACATTCCGGGATCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PLQRYIPLIDPGISFRNASVISN*YIPGSA Trigger: GGCTGATCCCGGAATGTACCAGTTGGATATCACACT...TGCATTCCTAAAACTAATTCCAGGGTCTATCAAGGGAATATACCTCTGCAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAGGAAGGGTTTGGTCCAAGTTCAACAACCTTGTTCTGTCTGAGCATACTACCGGAACTTCACATATaGATCACTCAACCCATTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QKEGFGPSSTTLFCLSILPELHI*ITQPIG Trigger: TCCAATGGGTTGAGTGATCCATATGTGAAGTTCCGG...TAGTATGCTCAGACAGAACAAGGTTGTTGAACTTGGACCAAACCCTTCCTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126960.8 |
||
| CDS-3UTR CCA 90 bp | AATGAAAACACTGGCCTTTCACTTAGCCAACTGCACTCTCCATTAAAACTCACTAGCAGCAAGACTCCTTaGGGGCGAATCCCAATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NENTGLSLSQLHSPLKLTSSKTP*GRIPIK Trigger: TTTGATTGGGATTCGCCCCCAAGGAGTCTTGCTGCT...AGTGAGTTTTAATGGAGAGTGCAGTTGGCTAAGTGAAAGGCCAGTGTTTTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR CCA 90 bp | TATGTTAAGTTGAAGTGCAACATTTCTATTATTCAAGCTTTGGGGTTTCCCCCGCACACAGGGCTACAATaGCCAGCCAGCTTAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: YVKLKCNISIIQALGFPPHTGLQ*PASLRR Trigger: CCTTCTTAAGCTGGCTGGCCATTGTAGCCCTGTGTG...CGGGGGAAACCCCAAAGCTTGAATAATAGAAATGTTGCACTTCAACTTAACATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR TCA 90 bp | CCTCTGCAGAGGTATATTCCCTTGATAGACCCTGGAATTAGTTTTAGGAATGCAGACCCCTTCTTAGTGTaGTATCCAACTGGTACATTC | + |
|
Preference number: 4 (lower is better) Translates to: PLQRYIPLIDPGISFRNADPFLV*YPTGTF Trigger: GAATGTACCAGTTGGATATCACACTAAGAAGGGGTC...TGCATTCCTAAAACTAATTCCAGGGTCTATCAAGGGAATATACCTCTGCAGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR TCA 90 bp | TATGTTAAGTTGAAGTGCAACATTTCTATTATTCAAGCTTTGGGGTTTCCCCCGTTGCTCTTGTACTTCTaGTGGCCAAGCCGGAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: YVKLKCNISIIQALGFPPLLLYF*WPSRNF Trigger: GAAGTTCCGGCTTGGCCATCAGAAGTACAAGAGCAA...CGGGGGAAACCCCAAAGCTTGAATAATAGAAATGTTGCACTTCAACTTAACATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR TCA 90 bp | TCTGATAGTTCGGTTCTTTCCCTTGTGATTGGAAAAATGTATATCTTCCAGTTTAGAGGACAGGGAAGATaGGGCGGAAGACGAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SDSSVLSLVIGKMYIFQFRGQGR*GGRRRR Trigger: CCTTCTTCGTCTTCCGCCTCATCTTCCCTGTCCTCT...AAACTGGAAGATATACATTTTTCCAATCACAAGGGAAAGAACCGAACTATCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR CCA 90 bp | CTTATTCATAGACTCTCAGATTCTCTTAAGGGATTATGTGTGTATGCAGACAGGAGTGGCTCTCTAAGATaGTCAATGAGCACGCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LIHRLSDSLKGLCVYADRSGSLR*SMSTQA Trigger: GGCTTGCGTGCTCATTGACCATCTTAGAGAGCCACT...CCTGTCTGCATACACACATAATCCCTTAAGAGAATCTGAGAGTCTATGAATAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR TCA 90 bp | GTAAAAAGTATTTGTTGTGCACCTAGGGACCCAGTTTCAATCCCTGAAACACATTTAACTCCAACTGAGTaGGATCAAGAAAGGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VKSICCAPRDPVSIPETHLTPTE*DQERLS Trigger: GCTCAGCCTTTCTTGATCTCACTCAGTTGGAGTTAA...ATGTGTTTCAGGGATTGAAACTGGGTCCCTAGGTGCACAACAAATACTTTTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126960.8 |
||
| CDS-3UTR TCA 90 bp | CCTCTGCAGAGGTATATTCCCTTGATAGACCCTGGAATTAGTTTTAGGAATGCACTGTTTAACTCCAACTaGGTGAGATCAAGAAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLQRYIPLIDPGISFRNALFNSN*VRSRKA Trigger: AGCCTTTCTTGATCTCACTCAGTTGGAGTTAAACAG...TGCATTCCTAAAACTAATTCCAGGGTCTATCAAGGGAATATACCTCTGCAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR TCA 90 bp | GTAAAAAGTATTTGTTGTGCACCTAGGGACCCAGTTTCAATCCCTGAAACACATAGGCGTAAGGATGACTaGCAGCAAAATGATTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VKSICCAPRDPVSIPETHRRKDD*QQNDSK Trigger: CTTGGAATCATTTTGCTGTCAGTCATCCTTACGCCT...ATGTGTTTCAGGGATTGAAACTGGGTCCCTAGGTGCACAACAAATACTTTTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126960.8 |
||
| CDS-3UTR TCA 90 bp | GTAAAAAGTATTTGTTGTGCACCTAGGGACCCAGTTTCAATCCCTGAAACACATTGGAATCCATTGCTTTaGGATCTCGACCCTCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: VKSICCAPRDPVSIPETHWNPLL*DLDPQS Trigger: TGATTGAGGGTCGAGATCTCAAAGCAATGGATTCCA...ATGTGTTTCAGGGATTGAAACTGGGTCCCTAGGTGCACAACAAATACTTTTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126960.8 |
||
| CDS-3UTR TCA 90 bp | CCTCTGCAGAGGTATATTCCCTTGATAGACCCTGGAATTAGTTTTAGGAATGCATGTTCCACTCAGGATTaGGGTTTTTGTACACAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PLQRYIPLIDPGISFRNACSTQD*GFCTQC Trigger: ACACTGTGTACAAAAACCTCAATCCTGAGTGGAACA...TGCATTCCTAAAACTAATTCCAGGGTCTATCAAGGGAATATACCTCTGCAGAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR TCA 90 bp | CTTATTCATAGACTCTCAGATTCTCTTAAGGGATTATGTGTGTATGCAGACAGGCTATTTCAAGATAGATaGCCCCCTTTGTTGGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LIHRLSDSLKGLCVYADRLFQDR*PPLLAL Trigger: CAGGGCCAACAAAGGGGGTCATCTATCTTGAAATAG...CCTGTCTGCATACACACATAATCCCTTAAGAGAATCTGAGAGTCTATGAATAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR TCA 90 bp | TCTGATAGTTCGGTTCTTTCCCTTGTGATTGGAAAAATGTATATCTTCCAGTTTGGATGTTCTGCACACTaGCACAGACTTCCTGGATCG | + |
|
Preference number: 4 (lower is better) Translates to: SDSSVLSLVIGKMYIFQFGCSAH*HRLPGS Trigger: CGATCCAGGAAGTCTGTGTCAGTGTGCAGAACATCC...AAACTGGAAGATATACATTTTTCCAATCACAAGGGAAAGAACCGAACTATCAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR GCA 90 bp | AATGAAAACACTGGCCTTTCACTTAGCCAACTGCACTCTCCATTAAAACTCACTTACTTATTTTCTGGCTaGAGTCGCGCTCTATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NENTGLSLSQLHSPLKLTYLFSG*SRALCP Trigger: AGGACATAGAGCGCGACTGCAGCCAGAAAATAAGTA...AGTGAGTTTTAATGGAGAGTGCAGTTGGCTAAGTGAAAGGCCAGTGTTTTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR CCA 90 bp | TTTGGTGAATTATCTCTTTGTTGTCAGCAGTCTAAGAACTGGAAAGTAGCTAACAGTGGCTCTCTAAGATaGTCAATGAGCACGCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FGELSLCCQQSKNWKVANSGSLR*SMSTQA Trigger: GGCTTGCGTGCTCATTGACCATCTTAGAGAGCCACT...GTTAGCTACTTTCCAGTTCTTAGACTGCTGACAACAAAGAGATAATTCACCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| CDS-3UTR TCA 90 bp | CTTATTCATAGACTCTCAGATTCTCTTAAGGGATTATGTGTGTATGCAGACAGGGAGATCAAGAAAGGCTaGGCCCATAAAGTCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LIHRLSDSLKGLCVYADREIKKG*AHKVIL Trigger: CAAGATGACTTTATGGGCTCAGCCTTTCTTGATCTC...CCTGTCTGCATACACACATAATCCCTTAAGAGAATCTGAGAGTCTATGAATAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR TCA 90 bp | GACCACAGTGAATTCCAGAAAATATTCAGCAACTTTCTCCAGTATGTGCCTTTTAGGCGTAAGGATGACTaGCAGCAAAATGATTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: DHSEFQKIFSNFLQYVPFRRKDD*QQNDSK Trigger: CTTGGAATCATTTTGCTGTCAGTCATCCTTACGCCT...AAAAGGCACATACTGGAGAAAGTTGCTGAATATTTTCTGGAATTCACTGTGGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| CDS-3UTR CCA 90 bp | CTTATTCATAGACTCTCAGATTCTCTTAAGGGATTATGTGTGTATGCAGACAGGCCGGAACTTCACATATaGATCACTCAACCCATTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LIHRLSDSLKGLCVYADRPELHI*ITQPIG Trigger: TCCAATGGGTTGAGTGATCCATATGTGAAGTTCCGG...CCTGTCTGCATACACACATAATCCCTTAAGAGAATCTGAGAGTCTATGAATAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR CCA 90 bp | TATGTTAAGTTGAAGTGCAACATTTCTATTATTCAAGCTTTGGGGTTTCCCCCGACTGTACTTATTTTCTaGCTGCAGTCGCGCTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: YVKLKCNISIIQALGFPPTVLIF*LQSRSM Trigger: CATAGAGCGCGACTGCAGCCAGAAAATAAGTACAGT...CGGGGGAAACCCCAAAGCTTGAATAATAGAAATGTTGCACTTCAACTTAACATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR TCA 90 bp | GTTCAGTTTCATCTTGATATTTCGTTCAAGAGTGGTACTATCACCAAAGGTACTGACCCCTTCTTAGTGTaGTATCCAACTGGTACATTC | + |
|
Preference number: 4 (lower is better) Translates to: VQFHLDISFKSGTITKGTDPFLV*YPTGTF Trigger: GAATGTACCAGTTGGATATCACACTAAGAAGGGGTC...AGTACCTTTGGTGATAGTACCACTCTTGAACGAAATATCAAGATGAAACTGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| CDS-3UTR TCA 90 bp | GTTCAGTTTCATCTTGATATTTCGTTCAAGAGTGGTACTATCACCAAAGGTACTGAGATCAAGAAAGGCTaGGCCCATAAAGTCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VQFHLDISFKSGTITKGTEIKKG*AHKVIL Trigger: CAAGATGACTTTATGGGCTCAGCCTTTCTTGATCTC...AGTACCTTTGGTGATAGTACCACTCTTGAACGAAATATCAAGATGAAACTGAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| CDS-3UTR TCA 90 bp | AGGAGCCCTGTAGTAAAGAACTTAGCAAATGGATTTCAAATCATAGAGCTTAAGGAGATCAAGAAAGGCTaGGCCCATAAAGTCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RSPVVKNLANGFQIIELKEIKKG*AHKVIL Trigger: CAAGATGACTTTATGGGCTCAGCCTTTCTTGATCTC...CTTAAGCTCTATGATTTGAAATCCATTTGCTAAGTTCTTTACTACAGGGCTCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126960.8 |
||
| CDS-3UTR TCA 90 bp | AATGAAAACACTGGCCTTTCACTTAGCCAACTGCACTCTCCATTAAAACTCACTCGTAAACTTTGGGTCTaGAACTTACTGGATCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NENTGLSLSQLHSPLKLTRKLWV*NLLDLF Trigger: GAAAAGATCCAGTAAGTTTCAGACCCAAAGTTTACG...AGTGAGTTTTAATGGAGAGTGCAGTTGGCTAAGTGAAAGGCCAGTGTTTTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR TCA 90 bp | CTTATTCATAGACTCTCAGATTCTCTTAAGGGATTATGTGTGTATGCAGACAGGCAAAGTTCCAGACAATaGGGAGAAAGAGCACAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LIHRLSDSLKGLCVYADRQSSRQ*GERAQK Trigger: CTTTTGTGCTCTTTCTCCTCATTGTCTGGAACTTTG...CCTGTCTGCATACACACATAATCCCTTAAGAGAATCTGAGAGTCTATGAATAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR GCA 90 bp | TATGTTAAGTTGAAGTGCAACATTTCTATTATTCAAGCTTTGGGGTTTCCCCCGAGCCAAAGGGACATCTaGATTACTGTTTCCAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: YVKLKCNISIIQALGFPPSQRDI*ITVSNC Trigger: ACAGTTGGAAACAGTAATGCAGATGTCCCTTTGGCT...CGGGGGAAACCCCAAAGCTTGAATAATAGAAATGTTGCACTTCAACTTAACATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR CCA 90 bp | TATGTTAAGTTGAAGTGCAACATTTCTATTATTCAAGCTTTGGGGTTTCCCCCGGGGTCTGAAACTTACTaGATCTTTTCCAACTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: YVKLKCNISIIQALGFPPGSETY*IFSNSS Trigger: GGAAGAGTTGGAAAAGATCCAGTAAGTTTCAGACCC...CGGGGGAAACCCCAAAGCTTGAATAATAGAAATGTTGCACTTCAACTTAACATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| 3UTR CAA 72 bp | ACTTTCTCCAGTATGTGCCTTTTGAGTCCTGGTCTTTaGGTGAATTATCTCTTTGTTGTCAGCAGTCTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TFSSMCLLSPGL*VNYLFVVSSLR Trigger: TCTTAGACTGCTGACAACAAAGAGATAATTCACCAAAAGACCAGGACTCAAAAGGCACATACTGGAGAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| CDS-3UTR TCA 90 bp | AGGAGCCCTGTAGTAAAGAACTTAGCAAATGGATTTCAAATCATAGAGCTTAAGCTGTTTAACTCCAACTaGGTGAGATCAAGAAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RSPVVKNLANGFQIIELKLFNSN*VRSRKA Trigger: AGCCTTTCTTGATCTCACTCAGTTGGAGTTAAACAG...CTTAAGCTCTATGATTTGAAATCCATTTGCTAAGTTCTTTACTACAGGGCTCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126960.8 |
||
| CDS-3UTR TCA 90 bp | TCTGATAGTTCGGTTCTTTCCCTTGTGATTGGAAAAATGTATATCTTCCAGTTTAGGCGTAAGGATGACTaGCAGCAAAATGATTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SDSSVLSLVIGKMYIFQFRRKDD*QQNDSK Trigger: CTTGGAATCATTTTGCTGTCAGTCATCCTTACGCCT...AAACTGGAAGATATACATTTTTCCAATCACAAGGGAAAGAACCGAACTATCAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR TCA 90 bp | TCTGATAGTTCGGTTCTTTCCCTTGTGATTGGAAAAATGTATATCTTCCAGTTTTGGAATCCATTGCTTTaGGATCTCGACCCTCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: SDSSVLSLVIGKMYIFQFWNPLL*DLDPQS Trigger: TGATTGAGGGTCGAGATCTCAAAGCAATGGATTCCA...AAACTGGAAGATATACATTTTTCCAATCACAAGGGAAAGAACCGAACTATCAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR TCA 90 bp | CTTATTCATAGACTCTCAGATTCTCTTAAGGGATTATGTGTGTATGCAGACAGGAGGGGACAGTCCAGTTaGAAGTATTCTTTATCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LIHRLSDSLKGLCVYADRRGQSS*KYSLSF Trigger: AAAGGATAAAGAATACTTTCAACTGGACTGTCCCCT...CCTGTCTGCATACACACATAATCCCTTAAGAGAATCTGAGAGTCTATGAATAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR GCA 90 bp | GTAAAAAGTATTTGTTGTGCACCTAGGGACCCAGTTTCAATCCCTGAAACACATAAACGAGTGGTAAATTaGAGAAACTTTTCAGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VKSICCAPRDPVSIPETHKRVVN*RNFSAC Trigger: ACAGGCTGAAAAGTTTCTGCAATTTACCACTCGTTT...ATGTGTTTCAGGGATTGAAACTGGGTCCCTAGGTGCACAACAAATACTTTTTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126960.8 |
||
| CDS-3UTR CCA 90 bp | CTTATTCATAGACTCTCAGATTCTCTTAAGGGATTATGTGTGTATGCAGACAGGTGTACTTCCGTTCTTTaGGTATTAATGTTCGTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LIHRLSDSLKGLCVYADRCTSVL*VLMFVS Trigger: GCTTACGAACATTAATACCCAAAGAACGGAAGTACA...CCTGTCTGCATACACACATAATCCCTTAAGAGAATCTGAGAGTCTATGAATAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR GCA 90 bp | TTTGGTGAATTATCTCTTTGTTGTCAGCAGTCTAAGAACTGGAAAGTAGCTAACAAACGAGTGGTAAATTaGAGAAACTTTTCAGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FGELSLCCQQSKNWKVANKRVVN*RNFSAC Trigger: ACAGGCTGAAAAGTTTCTGCAATTTACCACTCGTTT...GTTAGCTACTTTCCAGTTCTTAGACTGCTGACAACAAAGAGATAATTCACCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| CDS-3UTR GCA 90 bp | TCTTCCTTTATAAGTGGTATAATGAAAACACTGGCCTTTCACTTAGCCAACTGCACTATTAACGTAGTATaGAGCGTTTACAAGCACTAT | + |
|
Preference number: 4 (lower is better) Translates to: SSFISGIMKTLAFHLANCTINVV*SVYKHY Trigger: ATAGTGCTTGTAAACGCTGCATACTACGTTAATAGT...GCAGTTGGCTAAGTGAAAGGCCAGTGTTTTCATTATACCACTTATAAAGGAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR GCA 90 bp | TCTTCCTTTATAAGTGGTATAATGAAAACACTGGCCTTTCACTTAGCCAACTGCTTCATTGTTATCAATTaGATATGGACTCCGAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSFISGIMKTLAFHLANCFIVIN*IWTPKL Trigger: AAGCTTCGGAGTCCATATGCAATTGATAACAATGAA...GCAGTTGGCTAAGTGAAAGGCCAGTGTTTTCATTATACCACTTATAAAGGAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR CCA 90 bp | TCTGATAGTTCGGTTCTTTCCCTTGTGATTGGAAAAATGTATATCTTCCAGTTTAACAATGTATCTCAGTaGGATGAAGTACAGAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: SDSSVLSLVIGKMYIFQFNNVSQ*DEVQNG Trigger: GCCATTCTGTACTTCATCCCACTGAGATACATTGTT...AAACTGGAAGATATACATTTTTCCAATCACAAGGGAAAGAACCGAACTATCAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| 3UTR CAA 72 bp | GTTAAGTTGAAGTGCAACATTTCTATTATTCAAGCTTaGGGGTTTCCCCCGTTTGAATGTATAAACAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VKLKCNISIIQA*GFPPFECINRK Trigger: TTTCCTGTTTATACATTCAAACGGGGGAAACCCCAAAGCTTGAATAATAGAAATGTTGCACTTCAACTTAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS TCA 90 bp | GCTGTGAGGAGGAGAACACTCGGTCCAGCACTTGCTTCCGCTTCTTaGAGCCGCTCCACCTGCTGCCAGTACTTCCCACACCGGCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: AVRRRTLGPALASAS*SRSTCCQYFPHRPG Trigger: CCCTGGCCGGTGTGGGAAGTACTGGCAGCAGGTGGAGCGGCTTCAAGAAGCGGAAGCAAGTGCTGGACCGAGTGTTCTCCTCCTCACAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS GCA 90 bp | CAGCACAGGTTGGGCTGTGAGGAGGAGAACACTCGGTCCAGCACTTaGTTCCGCTTCTTGAAGCCGCTCCACCTGCTGCCAGTACTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: QHRLGCEEENTRSST*FRFLKPLHLLPVLP Trigger: GGGAAGTACTGGCAGCAGGTGGAGCGGCTTCAAGAAGCGGAAGCAAGTGCTGGACCGAGTGTTCTCCTCCTCACAGCCCAACCTGTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR CAA 90 bp | GAGAAGAGTAGAATGGCGTGGCTGCTGCCACAGTCTGCATGGAAGCAGGTGGCGCTTTTCCCAGCATCTTaGTCCCAGGCAGTGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: EKSRMAWLLPQSAWKQVALFPAS*SQAVMS Trigger: GGACATCACTGCCTGGGACAAAGATGCTGGGAAAAG...CGCCACCTGCTTCCATGCAGACTGTGGCAGCAGCCACGCCATTCTACTCTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126960.8 |
||
| CDS TCA 90 bp | AGAACCAGGTGGCCCTCACCCTCTTCCAGATGTAACTCCAGCTTGTaGGTTTGCTCCCTACTGAGGGAAGACAGGTCAACCTGGCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: RTRWPSPSSRCNSSL*VCSLLREDRSTWHL Trigger: AAGGTGCCAGGTTGACCTGTCTTCCCTCAGTAGGGAGCAAACTCACAAGCTGGAGTTACATCTGGAAGAGGGTGAGGGCCACCTGGTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109583.9 ENSMUST00000125209.8 |
||
| CDS-3UTR CAA 90 bp | TCTTCCTTTATAAGTGGTATAATGAAAACACTGGCCTTTCACTTAGCCAACTGCCCGCCGCCCTTGCCCTaGCCCACCCCCAGCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSFISGIMKTLAFHLANCPPPLP*PTPSCR Trigger: CCTGCAGCTGGGGGTGGGCAAGGGCAAGGGCGGCGG...GCAGTTGGCTAAGTGAAAGGCCAGTGTTTTCATTATACCACTTATAAAGGAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS GCA 90 bp | AAGGGACATCTGCATTACTGTTTCCAACTGTACTTATTTTCTGGCTaGAGTCGCGCTCTATGTCCTTCTGCAGAGCCTGGGGTTCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: KGHLHYCFQLYLFSG*SRALCPSAEPGVRR Trigger: CCGCCGAACCCCAGGCTCTGCAGAAGGACATAGAGCGCGACTGCAGCCAGAAAATAAGTACAGTTGGAAACAGTAATGCAGATGTCCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS TCA 90 bp | TCCCTCCTCGATCACGGGCAGCTAAACTTTGACCCCTTCTTAGTGTaGTATCCAACTGGTACATTCCGGGATCAGCCAAAGGGACATCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLLDHGQLNFDPFLV*YPTGTFRDQPKGHL Trigger: CAGATGTCCCTTTGGCTGATCCCGGAATGTACCAGTTGGATATCACACTAAGAAGGGGTCAAAGTTTAGCTGCCCGTGATCGAGGAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109589.3 ENSMUST00000125209.8 ENSMUST00000126960.8 |
||
| CDS CCA 90 bp | GCCAAAGGGACATCTGCATTACTGTTTCCAACTGTACTTATTTTCTaGCTGCAGTCGCGCTCTATGTCCTTCTGCAGAGCCTGGGGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: AKGTSALLFPTVLIF*LQSRSMSFCRAWGS Trigger: CGAACCCCAGGCTCTGCAGAAGGACATAGAGCGCGACTGCAGCCAGAAAATAAGTACAGTTGGAAACAGTAATGCAGATGTCCCTTTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS TCA 90 bp | ACATACGGATCGCTTGTCCCTCCTCGATCACGGGCAGCTAAACTTTaGCCCCTTCTTAGTGTGATATCCAACTGGTACATTCCGGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: TYGSLVPPRSRAAKL*PLLSVISNWYIPGS Trigger: TGATCCCGGAATGTACCAGTTGGATATCACACTAAGAAGGGGTCAAAGTTTAGCTGCCCGTGATCGAGGAGGGACAAGCGATCCGTATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109589.3 ENSMUST00000125209.8 ENSMUST00000126960.8 |
||
| CDS-3UTR CAA 90 bp | AATGAAAACACTGGCCTTTCACTTAGCCAACTGCACTCTCCATTAAAACTCACTCACTCGGTCCAGCACTaGCTTCCGCTTCTTGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: NENTGLSLSQLHSPLKLTHSVQH*LPLLEA Trigger: GGCTTCAAGAAGCGGAAGCAAGTGCTGGACCGAGTG...AGTGAGTTTTAATGGAGAGTGCAGTTGGCTAAGTGAAAGGCCAGTGTTTTCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR CAA 90 bp | CTTATTCATAGACTCTCAGATTCTCTTAAGGGATTATGTGTGTATGCAGACAGGCAGAGAGGAGCTCTTTaGGTGGCACAGGTGCACCCC | + |
|
Preference number: 5 (lower is better) Translates to: LIHRLSDSLKGLCVYADRQRGAL*VAQVHP Trigger: GGGGTGCACCTGTGCCACCAAAAGAGCTCCTCTCTG...CCTGTCTGCATACACACATAATCCCTTAAGAGAATCTGAGAGTCTATGAATAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR CAA 90 bp | CCTCTGCAGAGGTATATTCCCTTGATAGACCCTGGAATTAGTTTTAGGAATGCACTTTTCCCAGCATCTTaGTCCCAGGCAGTGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PLQRYIPLIDPGISFRNALFPAS*SQAVMS Trigger: GGACATCACTGCCTGGGACAAAGATGCTGGGAAAAG...TGCATTCCTAAAACTAATTCCAGGGTCTATCAAGGGAATATACCTCTGCAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR CAA 90 bp | TCTTCCTTTATAAGTGGTATAATGAAAACACTGGCCTTTCACTTAGCCAACTGCACTTGCTTCCGCTTCTaGAAGCCGCTCCACCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSFISGIMKTLAFHLANCTCFRF*KPLHLL Trigger: CAGCAGGTGGAGCGGCTTCAAGAAGCGGAAGCAAGT...GCAGTTGGCTAAGTGAAAGGCCAGTGTTTTCATTATACCACTTATAAAGGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS GCA 90 bp | AAGCCGGAACTTCACATATGGATCACTCAACCCATTGGAATCCATTaGTTTGAGATCTCGACCCTCAATCAAGGTGATGCTGACTATTCC | + |
|
Preference number: 5 (lower is better) Translates to: KPELHIWITQPIGIH*FEISTLNQGDADYS Trigger: GGAATAGTCAGCATCACCTTGATTGAGGGTCGAGATCTCAAAGCAATGGATTCCAATGGGTTGAGTGATCCATATGTGAAGTTCCGGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109583.9 ENSMUST00000125209.8 ENSMUST00000126960.8 |
||
| CDS CCA 90 bp | AATCTTGCTCTTGTACTTCTGATGGCCAAGCCGGAACTTCACATATaGATCACTCAACCCATTGGAATCCATTGCTTTGAGATCTCGACC | + |
|
Preference number: 5 (lower is better) Translates to: NLALVLLMAKPELHI*ITQPIGIHCFEIST Trigger: GGTCGAGATCTCAAAGCAATGGATTCCAATGGGTTGAGTGATCCATATGTGAAGTTCCGGCTTGGCCATCAGAAGTACAAGAGCAAGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109583.9 ENSMUST00000125209.8 ENSMUST00000126960.8 |
||
| CDS CCA 90 bp | ATTCTTCAAGAAGTGAGGCTCATGGCTGCAGCCTGGATGAAAGACTaGACTGCTGCTTCCAATAAAGTCATCTCTTTTCCCAGCATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: ILQEVRLMAAAWMKD*TAASNKVISFPSIF Trigger: AAAGATGCTGGGAAAAGAGATGACTTTATTGGAAGCAGCAGTCCAGTCTTTCATCCAGGCTGCAGCCATGAGCCTCACTTCTTGAAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126960.8 |
||
| CDS-3UTR CAA 90 bp | GGAGCAAAAGGAAAATGGTCAGAAGGAAGGGTTTGGTCCAAGTTCAACAACCTTGAGATGGAAATCAAATaGCTCCCTCCACTGAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: GAKGKWSEGRVWSKFNNLEMEIK*LPPLRV Trigger: AACCCTCAGTGGAGGGAGCAATTTGATTTCCATCTC...AAGGTTGTTGAACTTGGACCAAACCCTTCCTTCTGACCATTTTCCTTTTGCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126960.8 |
||
| CDS-3UTR CAA 90 bp | TATGTTAAGTTGAAGTGCAACATTTCTATTATTCAAGCTTTGGGGTTTCCCCCGCTCCAGCTTGTGAGTTaGCTCCCTACTGAGGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: YVKLKCNISIIQALGFPPLQLVS*LPTEGR Trigger: TCTTCCCTCAGTAGGGAGCAAACTCACAAGCTGGAG...CGGGGGAAACCCCAAAGCTTGAATAATAGAAATGTTGCACTTCAACTTAACATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR CAA 90 bp | CTTATTCATAGACTCTCAGATTCTCTTAAGGGATTATGTGTGTATGCAGACAGGAAGCAGCAAGACTCCTaGGGGGCGAATCCCAATCAA | + |
|
Preference number: 5 (lower is better) Translates to: LIHRLSDSLKGLCVYADRKQQDS*GANPNQ Trigger: TTGATTGGGATTCGCCCCCAAGGAGTCTTGCTGCTT...CCTGTCTGCATACACACATAATCCCTTAAGAGAATCTGAGAGTCTATGAATAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR CAA 90 bp | GGAGCAAAAGGAAAATGGTCAGAAGGAAGGGTTTGGTCCAAGTTCAACAACCTTGCCCATAAAGTCATCTaGCAGTCCAAAATCATAGTC | + |
|
Preference number: 5 (lower is better) Translates to: GAKGKWSEGRVWSKFNNLAHKVI*QSKIIV Trigger: GACTATGATTTTGGACTGCAAGATGACTTTATGGGC...AAGGTTGTTGAACTTGGACCAAACCCTTCCTTCTGACCATTTTCCTTTTGCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000126960.8 |
||
| CDS-3UTR CAA 90 bp | TCTTCCTTTATAAGTGGTATAATGAAAACACTGGCCTTTCACTTAGCCAACTGCGAGATGGAAATCAAATaGCTCCCTCCACTGAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SSFISGIMKTLAFHLANCEMEIK*LPPLRV Trigger: AACCCTCAGTGGAGGGAGCAATTTGATTTCCATCTC...GCAGTTGGCTAAGTGAAAGGCCAGTGTTTTCATTATACCACTTATAAAGGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS GCA 90 bp | ACTCCTTGGGGGCGAATCCCAATCAAAGCAACTATTAACGTAGTATaGAGCGTTTACAAGCACTATGACACAACGTTTTGTTCTGATAAA | + |
|
Preference number: 5 (lower is better) Translates to: TPWGRIPIKATINVV*SVYKHYDTTFCSDK Trigger: TTTATCAGAACAAAACGTTGTGTCATAGTGCTTGTAAACGCTGCATACTACGTTAATAGTTGCTTTGATTGGGATTCGCCCCCAAGGAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109583.9 ENSMUST00000125209.8 |
||
| CDS-3UTR CAA 90 bp | AAATATTCAGCAACTTTCTCCAGTATGTGCCTTTTGAGTCCTGGTCTTTTGGTGCAAACGAGTGGTAAATaGCAGAAACTTTTCAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: KYSATFSSMCLLSPGLLVQTSGK*QKLFSL Trigger: CAGGCTGAAAAGTTTCTGCAATTTACCACTCGTTTG...CACCAAAAGACCAGGACTCAAAAGGCACATACTGGAGAAAGTTGCTGAATATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| CDS-3UTR CAA 90 bp | GTAAAAAGTATTTGTTGTGCACCTAGGGACCCAGTTTCAATCCCTGAAACACATCAAACGAGTGGTAAATaGCAGAAACTTTTCAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VKSICCAPRDPVSIPETHQTSGK*QKLFSL Trigger: CAGGCTGAAAAGTTTCTGCAATTTACCACTCGTTTG...ATGTGTTTCAGGGATTGAAACTGGGTCCCTAGGTGCACAACAAATACTTTTTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126960.8 |
||
| CDS-3UTR CAA 90 bp | AAATATTCAGCAACTTTCTCCAGTATGTGCCTTTTGAGTCCTGGTCTTTTGGTGGCCCATAAAGTCATCTaGCAGTCCAAAATCATAGTC | + |
|
Preference number: 5 (lower is better) Translates to: KYSATFSSMCLLSPGLLVAHKVI*QSKIIV Trigger: GACTATGATTTTGGACTGCAAGATGACTTTATGGGC...CACCAAAAGACCAGGACTCAAAAGGCACATACTGGAGAAAGTTGCTGAATATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| CDS-3UTR CAA 90 bp | TCTTCCTTTATAAGTGGTATAATGAAAACACTGGCCTTTCACTTAGCCAACTGCTCTTCCTCATTAGCATaGTCACATCCCTGTGTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: SSFISGIMKTLAFHLANCSSSLA*SHPCVH Trigger: GTGAACACAGGGATGTGACAATGCTAATGAGGAAGA...GCAGTTGGCTAAGTGAAAGGCCAGTGTTTTCATTATACCACTTATAAAGGAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR CAA 90 bp | TCTTCCTTTATAAGTGGTATAATGAAAACACTGGCCTTTCACTTAGCCAACTGCCCCACGTCTTTTAGGTaGTTAAATATCCTCAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSFISGIMKTLAFHLANCPTSFR*LNILSG Trigger: CCCACTGAGGATATTTAACAACCTAAAAGACGTGGG...GCAGTTGGCTAAGTGAAAGGCCAGTGTTTTCATTATACCACTTATAAAGGAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR CAA 90 bp | GTTCAGTTTCATCTTGATATTTCGTTCAAGAGTGGTACTATCACCAAAGGTACTTCTTCCTCATTAGCATaGTCACATCCCTGTGTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: VQFHLDISFKSGTITKGTSSSLA*SHPCVH Trigger: GTGAACACAGGGATGTGACAATGCTAATGAGGAAGA...AGTACCTTTGGTGATAGTACCACTCTTGAACGAAATATCAAGATGAAACTGAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109589.3 |
||
| CDS-3UTR CAA 90 bp | TATGTTAAGTTGAAGTGCAACATTTCTATTATTCAAGCTTTGGGGTTTCCCCCGTCAGGATTGAGGTTTTaGTACACAGTGTGTGTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: YVKLKCNISIIQALGFPPSGLRF*YTVCVS Trigger: GCTAACACACACTGTGTACAAAAACCTCAATCCTGA...CGGGGGAAACCCCAAAGCTTGAATAATAGAAATGTTGCACTTCAACTTAACATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR CAA 90 bp | TATGTTAAGTTGAAGTGCAACATTTCTATTATTCAAGCTTTGGGGTTTCCCCCGGTTAGCAGCCTATCATaGTTCAGTTCTACTACACAA | + |
|
Preference number: 5 (lower is better) Translates to: YVKLKCNISIIQALGFPPVSSLS*FSSTTQ Trigger: TTGTGTAGTAGAACTGAACAATGATAGGCTGCTAAC...CGGGGGAAACCCCAAAGCTTGAATAATAGAAATGTTGCACTTCAACTTAACATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR CAA 90 bp | TATGTTAAGTTGAAGTGCAACATTTCTATTATTCAAGCTTTGGGGTTTCCCCCGTTAAATGTGAACACTTaGTTCCACTCAGGATTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: YVKLKCNISIIQALGFPPLNVNT*FHSGLR Trigger: CCTCAATCCTGAGTGGAACAAAGTGTTCACATTTAA...CGGGGGAAACCCCAAAGCTTGAATAATAGAAATGTTGCACTTCAACTTAACATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR CAA 90 bp | CTTATTCATAGACTCTCAGATTCTCTTAAGGGATTATGTGTGTATGCAGACAGGAAGGGGACAGTCCAGTaGAAAGTATTCTTTATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LIHRLSDSLKGLCVYADRKGTVQ*KVFFIL Trigger: AAGGATAAAGAATACTTTCAACTGGACTGTCCCCTT...CCTGTCTGCATACACACATAATCCCTTAAGAGAATCTGAGAGTCTATGAATAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR CAA 90 bp | TCTGATAGTTCGGTTCTTTCCCTTGTGATTGGAAAAATGTATATCTTCCAGTTTATCTGGTTTCAGTTCTaGGTACTGCACCACTTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SDSSVLSLVIGKMYIFQFIWFQF*VLHHLY Trigger: GTACAAGTGGTGCAGTACCAAGAACTGAAACCAGAT...AAACTGGAAGATATACATTTTTCCAATCACAAGGGAAAGAACCGAACTATCAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR CAA 90 bp | TCTGATAGTTCGGTTCTTTCCCTTGTGATTGGAAAAATGTATATCTTCCAGTTTGCCCATAAAGTCATCTaGCAGTCCAAAATCATAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SDSSVLSLVIGKMYIFQFAHKVI*QSKIIV Trigger: GACTATGATTTTGGACTGCAAGATGACTTTATGGGC...AAACTGGAAGATATACATTTTTCCAATCACAAGGGAAAGAACCGAACTATCAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS-3UTR CAA 90 bp | TATGTTAAGTTGAAGTGCAACATTTCTATTATTCAAGCTTTGGGGTTTCCCCCGATGTACTTCCGTTCTTaGGGTATTAATGTTCGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: YVKLKCNISIIQALGFPPMYFRS*GINVRK Trigger: CTTACGAACATTAATACCCAAAGAACGGAAGTACAT...CGGGGGAAACCCCAAAGCTTGAATAATAGAAATGTTGCACTTCAACTTAACATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS GCA 72 bp | GTAGGCGGCGGCGCAGCGTGGACCCTTGCTCGGCTCTaGCTGCTCCGCCTGGCTCCAGGGGCTCTGGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: VGGGAAWTLARL*LLRLAPGALVR Trigger: CCTCACCAGAGCCCCTGGAGCCAGGCGGAGCAGGCAGAGCCGAGCAAGGGTCCACGCTGCGCCGCCGCCTAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS CCA 72 bp | TGGCTGCAGTCGCGCTCTATGTCCTTCTGCAGAGCCTaGGGTTCGGCGGGACCCCGGGCCGGTTCTGCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: WLQSRSMSFCRA*GSAGPRAGSAG Trigger: CCCCGCAGAACCGGCCCGGGGTCCCGCCGAACCCCAGGCTCTGCAGAAGGACATAGAGCGCGACTGCAGCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS CAA 72 bp | CTCCAGGCACGCGGTTCCGGGCAGAGAGGAGCTCTTTaGGTGGCACAGGTGCACCCCAGGGCCCCCACGCCG | + |
|
Preference number: 6 (lower is better) Translates to: LQARGSGQRGAL*VAQVHPRAPTP Trigger: CGGCGTGGGGGCCCTGGGGTGCACCTGTGCCACCAAAAGAGCTCCTCTCTGCCCGGAACCGCGTGCCTGGAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS CAA 90 bp | CAGCAACTGCTCCAGGCACGCGGTTCCGGGCAGAGAGGAGCTCTTTaGGTGGCACAGGTGCACCCCAGGGCCCCCACGCCGTGTACTCTC | + |
|
Preference number: 6 (lower is better) Translates to: QQLLQARGSGQRGAL*VAQVHPRAPTPCTL Trigger: GAGAGTACACGGCGTGGGGGCCCTGGGGTGCACCTGTGCCACCAAAAGAGCTCCTCTCTGCCCGGAACCGCGTGCCTGGAGCAGTTGCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS CAA 90 bp | GGCTGTGAGGAGGAGAACACTCGGTCCAGCACTTGCTTCCGCTTCTaGAAGCCGCTCCACCTGCTGCCAGTACTTCCCACACCGGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GCEEENTRSSTCFRF*KPLHLLPVLPTPAR Trigger: CCTGGCCGGTGTGGGAAGTACTGGCAGCAGGTGGAGCGGCTTCAAGAAGCGGAAGCAAGTGCTGGACCGAGTGTTCTCCTCCTCACAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS GCA 72 bp | TTGGGCTGTGAGGAGGAGAACACTCGGTCCAGCACTTaGTTCCGCTTCTTGAAGCCGCTCCACCTGCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LGCEEENTRSST*FRFLKPLHLLP Trigger: TGGCAGCAGGTGGAGCGGCTTCAAGAAGCGGAAGCAAGTGCTGGACCGAGTGTTCTCCTCCTCACAGCCCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS TCA 72 bp | AGGAGAACACTCGGTCCAGCACTTGCTTCCGCTTCTTaGAGCCGCTCCACCTGCTGCCAGTACTTCCCACAC | + |
|
Preference number: 6 (lower is better) Translates to: RRTLGPALASAS*SRSTCCQYFPH Trigger: GTGTGGGAAGTACTGGCAGCAGGTGGAGCGGCTTCAAGAAGCGGAAGCAAGTGCTGGACCGAGTGTTCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS CAA 72 bp | GAGGAGAACACTCGGTCCAGCACTTGCTTCCGCTTCTaGAAGCCGCTCCACCTGCTGCCAGTACTTCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: EENTRSSTCFRF*KPLHLLPVLPT Trigger: TGTGGGAAGTACTGGCAGCAGGTGGAGCGGCTTCAAGAAGCGGAAGCAAGTGCTGGACCGAGTGTTCTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS TCA 72 bp | TGGCCCTCACCCTCTTCCAGATGTAACTCCAGCTTGTaGGTTTGCTCCCTACTGAGGGAAGACAGGTCAACC | + |
|
Preference number: 6 (lower is better) Translates to: WPSPSSRCNSSL*VCSLLREDRST Trigger: GGTTGACCTGTCTTCCCTCAGTAGGGAGCAAACTCACAAGCTGGAGTTACATCTGGAAGAGGGTGAGGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109583.9 ENSMUST00000125209.8 |
||
| CDS TCA 72 bp | TTCCTGTGCTGGTCGGACAGGCGTAAACTTTGGGTCTaGAACACATCCCTGTGTTCACCTTCCTTAGGCGTA | + |
|
Preference number: 6 (lower is better) Translates to: FLCWSDRRKLWV*NTSLCSPSLGV Trigger: TACGCCTAAGGAAGGTGAACACAGGGATGTGTTTCAGACCCAAAGTTTACGCCTGTCCGACCAGCACAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126960.8 |
||
| CDS GCA 72 bp | CTGCATTACTGTTTCCAACTGTACTTATTTTCTGGCTaGAGTCGCGCTCTATGTCCTTCTGCAGAGCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LHYCFQLYLFSG*SRALCPSAEPG Trigger: CCCAGGCTCTGCAGAAGGACATAGAGCGCGACTGCAGCCAGAAAATAAGTACAGTTGGAAACAGTAATGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS CCA 72 bp | GAAGTGAGGCTCATGGCTGCAGCCTGGATGAAAGACTaGACTGCTGCTTCCAATAAAGTCATCTCTTTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: EVRLMAAAWMKD*TAASNKVISFP Trigger: GGGAAAAGAGATGACTTTATTGGAAGCAGCAGTCCAGTCTTTCATCCAGGCTGCAGCCATGAGCCTCACTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126960.8 |
||
| CDS TCA 72 bp | GATCACGGGCAGCTAAACTTTGACCCCTTCTTAGTGTaGTATCCAACTGGTACATTCCGGGATCAGCCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: DHGQLNFDPFLV*YPTGTFRDQPK Trigger: CTTTGGCTGATCCCGGAATGTACCAGTTGGATATCACACTAAGAAGGGGTCAAAGTTTAGCTGCCCGTGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109589.3 ENSMUST00000125209.8 ENSMUST00000126960.8 |
||
| CDS TCA 72 bp | TCGCTTGTCCCTCCTCGATCACGGGCAGCTAAACTTTaGCCCCTTCTTAGTGTGATATCCAACTGGTACATT | + |
|
Preference number: 6 (lower is better) Translates to: SLVPPRSRAAKL*PLLSVISNWYI Trigger: AATGTACCAGTTGGATATCACACTAAGAAGGGGTCAAAGTTTAGCTGCCCGTGATCGAGGAGGGACAAGCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109589.3 ENSMUST00000125209.8 ENSMUST00000126960.8 |
||
| CDS CCA 72 bp | ACATCTGCATTACTGTTTCCAACTGTACTTATTTTCTaGCTGCAGTCGCGCTCTATGTCCTTCTGCAGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: TSALLFPTVLIF*LQSRSMSFCRA Trigger: GGCTCTGCAGAAGGACATAGAGCGCGACTGCAGCCAGAAAATAAGTACAGTTGGAAACAGTAATGCAGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125209.8 |
||
| CDS CAA 72 bp | CCAAGCCGGAACTTCACATATGGATCACTCAACCCATaGGAATCCATTGCTTTGAGATCTCGACCCTCAATC | + |
|
Preference number: 6 (lower is better) Translates to: PSRNFTYGSLNP*ESIALRSRPSI Trigger: GATTGAGGGTCGAGATCTCAAAGCAATGGATTCCAATGGGTTGAGTGATCCATATGTGAAGTTCCGGCTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109583.9 ENSMUST00000125209.8 ENSMUST00000126960.8 |
||
| CDS CAA 72 bp | CACCTTCCAATAAAGTCATCTCTTTTCCCAGCATCTTaGTCCCAGGCAGTGATGTCCATGATCCCACCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: HLPIKSSLFPAS*SQAVMSMIPPL Trigger: AAGAGGTGGGATCATGGACATCACTGCCTGGGACAAAGATGCTGGGAAAAGAGATGACTTTATTGGAAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109583.9 ENSMUST00000125209.8 |
||
| CDS CAA 72 bp | CTGCTTCCAATAAAGTCATCTCTTTTCCCAGCATCTTaGTCCCAGGCAGTGATGTCCATGATCCCACCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LLPIKSSLFPAS*SQAVMSMIPPL Trigger: AAGAGGTGGGATCATGGACATCACTGCCTGGGACAAAGATGCTGGGAAAAGAGATGACTTTATTGGAAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126960.8 |
||
| CDS CAA 90 bp | CGGAACTTCACATATGGATCACTCAACCCATTGGAATCCATTGCTTaGAGATCTCGACCCTCAATCAAGGTGATGCTGACTATTCCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: RNFTYGSLNPLESIA*RSRPSIKVMLTIPL Trigger: GAGAGGAATAGTCAGCATCACCTTGATTGAGGGTCGAGATCTCAAAGCAATGGATTCCAATGGGTTGAGTGATCCATATGTGAAGTTCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109583.9 ENSMUST00000125209.8 ENSMUST00000126960.8 |
||
| CDS TCA 72 bp | ATCCCTGTGTTCACCTTCCTTAGGCGTAAGGATGACTaGCAGCAAAATGATTCCAAGGTCATGGTCAGGATA | + |
|
Preference number: 6 (lower is better) Translates to: IPVFTFLRRKDD*QQNDSKVMVRI Trigger: TATCCTGACCATGACCTTGGAATCATTTTGCTGTCAGTCATCCTTACGCCTAAGGAAGGTGAACACAGGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000109583.9 ENSMUST00000109589.3 ENSMUST00000125209.8 ENSMUST00000126960.8 |
||
| CDS GCA 72 bp | ATACATATAGATTCTTCAAGAAGTGAGGCTCATGGCTaGAGCCTGGATGAAAGACTGGACTGCTGCTTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: IHIDSSRSEAHG*SLDERLDCCFQ Trigger: TTGGAAGCAGCAGTCCAGTCTTTCATCCAGGCTGCAGCCATGAGCCTCACTTCTTGAAGAATCTATATGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126960.8 |
||
| CDS GCA 72 bp | CTTCACATATGGATCACTCAACCCATTGGAATCCATTaGTTTGAGATCTCGACCCTCAATCAAGGTGATGCT | + |
|
Preference number: 6 (lower is better) Translates to: LHIWITQPIGIH*FEISTLNQGDA Trigger: AGCATCACCTTGATTGAGGGTCGAGATCTCAAAGCAATGGATTCCAATGGGTTGAGTGATCCATATGTGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109583.9 ENSMUST00000125209.8 ENSMUST00000126960.8 |
||
| CDS CCA 72 bp | AATCACATCTATTTCAAGATAGATGACCCCCTTTGTTaGCCCTGTCAGCTGCTTGTTTTTCAAGACGTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: NHIYFKIDDPLC*PCQLLVFQDVG Trigger: GCCTACGTCTTGAAAAACAAGCAGCTGACAGGGCCAACAAAGGGGGTCATCTATCTTGAAATAGATGTGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000109583.9 ENSMUST00000125209.8 |
||
| CDS CAA 72 bp | ACATATGGATCACTCAACCCATTGGAATCCATTGCTTaGAGATCTCGACCCTCAATCAAGGTGATGCTGACT | + |
|
Preference number: 6 (lower is better) Translates to: TYGSLNPLESIA*RSRPSIKVMLT Trigger: AGTCAGCATCACCTTGATTGAGGGTCGAGATCTCAAAGCAATGGATTCCAATGGGTTGAGTGATCCATATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109583.9 ENSMUST00000125209.8 ENSMUST00000126960.8 |
||
| CDS GCA 72 bp | GGGCGAATCCCAATCAAAGCAACTATTAACGTAGTATaGAGCGTTTACAAGCACTATGACACAACGTTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: GRIPIKATINVV*SVYKHYDTTFC Trigger: ACAAAACGTTGTGTCATAGTGCTTGTAAACGCTGCATACTACGTTAATAGTTGCTTTGATTGGGATTCGCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109583.9 ENSMUST00000125209.8 |
||
| CDS CAA 72 bp | ATGACTTTCACCTGGAGAAATCCCACGTCTTTTAGGTaGTTAAATATCCTCAGTGGGCTATATCTCTTTAAT | + |
|
Preference number: 6 (lower is better) Translates to: MTFTWRNPTSFR*LNILSGLYLFN Trigger: ATTAAAGAGATATAGCCCACTGAGGATATTTAACAACCTAAAAGACGTGGGATTTCTCCAGGTGAAAGTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109583.9 ENSMUST00000125209.8 |
||