Pregenerated sensors for MCRS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037570Ensembl transcript IDs: ENSMUST00000041190.17, ENSMUST00000163506.3, ENSMUST00000229359.2, ENSMUST00000229399.2, ENSMUST00000229671.2, ENSMUST00000229926.2
Found 190 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTaGGTACAAGGGTTTTCCAGGAGCCTGAGTTCCCAGCTCAAGGGA | + |
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Preference number: 1 (lower is better) Translates to: KAQSMGQQSGLHSPL*VQGFSRSLSSQLKG Trigger: TCCCTTGAGCTGGGAACTCAGGCTCCTGGAAAACCCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| 3UTR-3UTR CCA 90 bp | CAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGGTTTTCCACCAGCTCAAGGGAGCTaGAATGACAGGGAAACTGAG | + |
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Preference number: 2 (lower is better) Translates to: QWASSRASTPHSGYKGFPPAQGS*NDRETE Trigger: CTCAGTTTCCCTGTCATTCCAGCTCCCTTGAGCTGG...TGGAAAACCCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| 3UTR-3UTR CCA 90 bp | ACCCCACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCAGCTCAAGGGAGCTaGAATGACAGGGAAACTGAG | + |
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Preference number: 2 (lower is better) Translates to: TPPCLKGSINGPAVGPPLPAQGS*NDRETE Trigger: CTCAGTTTCCCTGTCATTCCAGCTCCCTTGAGCTGG...GAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| 3UTR GCA 72 bp | CCAGCCTCTCCTGGCTTCCCCATGGTGACCCCACCTTaGCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGG | + |
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Preference number: 3 (lower is better) Translates to: PASPGFPMVTPP*LKGSINGPAVG Trigger: CCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTGGGGTCACCATGGGGAAGCCAGGAGAGGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR GCA 90 bp | GGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGCAGGGCCTGGGAGGATaGTCGCTTCTGCCCTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: GSINGPAVGPPLPTLGTRQGLGG*SLLPCQ Trigger: CTGGCAGGGCAGAAGCGAGCATCCTCCCAGGCCCTG...CCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR GCA 90 bp | GCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGGTTAGGTACCGCACCATaGGGCCCCGCAGCACGGCCA | + |
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Preference number: 4 (lower is better) Translates to: AQSMGQQSGLHSPLWVQGLGTAP*GPAARP Trigger: TGGCCGTGCTGCGGGGCCGCATGGTGCGGTACCTAA...CCCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR TCA 90 bp | ACCCCACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCTTCTGCCCTGCCAGTaGCTCCTCATCCTCGGAGCG | + |
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Preference number: 4 (lower is better) Translates to: TPPCLKGSINGPAVGPPLLLPCQ*LLILGA Trigger: CGCTCCGAGGATGAGGAGTCACTGGCAGGGCAGAAG...GAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTGGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR GCA 90 bp | CTCTCCTGGCTTCCCCATGGTGACCCCACCTTGCCTCAAAGGCTCAATCAATGGCGGAGCGGCTGGCTGTaGCTGACGCCATCAGGGACG | + |
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Preference number: 4 (lower is better) Translates to: LSWLPHGDPTLPQRLNQWRSGWL*LTPSGT Trigger: CGTCCCTGATGGCGTCAGGCACAGCCAGCCGCTCCG...CCATTGATTGAGCCTTTGAGGCAAGGTGGGGTCACCATGGGGAAGCCAGGAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041190.17 |
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| CDS-3UTR GCA 90 bp | CCCCACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCGAGGAGGAGGTCATCTaGAGGCTTCCATCGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PHLASKAQSMGQQSGLHSEEEVI*RLPSAQ Trigger: CTGGGCCGATGGAAGCCTGCAGATGACCTCCTCCTC...GGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR GCA 90 bp | GCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGGAGCTGCCAGTGGGCCTaGAGAGCCTTGGCAGTACGA | + |
|
Preference number: 4 (lower is better) Translates to: AQSMGQQSGLHSPLWVQGSCQWA*RALAVR Trigger: TCGTACTGCCAAGGCTCTGCAGGCCCACTGGCAGCT...CCCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR CCA 90 bp | CCCCACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCCGGGTGGAGGATTTaGCCAGGCTGCTCTCTACCA | + |
|
Preference number: 4 (lower is better) Translates to: PHLASKAQSMGQQSGLHSPGWRI*PGCSLP Trigger: TGGTAGAGAGCAGCCTGGCCAAATCCTCCACCCGGG...GGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| 3UTR CAA 72 bp | CCCAGCCTCTCCTGGCTTCCCCATGGTGACCCCACCTaGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGG | + |
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Preference number: 4 (lower is better) Translates to: PSLSWLPHGDPT*PQRLNQWASSR Trigger: CCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTGGGGTCACCATGGGGAAGCCAGGAGAGGCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR TCA 90 bp | CCCCACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCAAGCCAGCTTGGAGATaGCAGGGTCGTAGAGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: PHLASKAQSMGQQSGLHSKPAWR*QGRRAG Trigger: CCCTGCTCTACGACCCTGTCATCTCCAAGCTGGCTT...GGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR TCA 90 bp | CCCCACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCGCTCCTCAGCCTTGCTaGACAGGGCCTTGCTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: PHLASKAQSMGQQSGLHSAPQPC*TGPCSE Trigger: TTCAGAGCAAGGCCCTGTTCAGCAAGGCTGAGGAGC...GGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR TCA 90 bp | CACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCAGGTGGGCTGGCTGCTTaGTCCCACTTTGCTCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: HLASKAQSMGQQSGLHSPGGLAA*SHFAQQ Trigger: CTGCTGAGCAAAGTGGGATCAAGCAGCCAGCCCACC...TGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR TCA 90 bp | CCCCACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCGAGAGCCCATGCCTGTaGTGCTGTCCACTAGCACCT | + |
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Preference number: 4 (lower is better) Translates to: PHLASKAQSMGQQSGLHSESPCL*CCPLAP Trigger: AGGTGCTAGTGGACAGCATCACAGGCATGGGCTCTC...GGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR GCA 90 bp | GGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGGAGGATGCTCGCTTCTaGCCTGCCAGTGACTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSINGPAVGPPLPTLGTREDARF*PASDSS Trigger: TGAGGAGTCACTGGCAGGGCAGAAGCGAGCATCCTC...CCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR GCA 90 bp | CCCCACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCGAGGATGCTCGCTTCTaGCCTGCCAGTGACTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: PHLASKAQSMGQQSGLHSEDARF*PASDSS Trigger: TGAGGAGTCACTGGCAGGGCAGAAGCGAGCATCCTC...GGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR GCA 90 bp | CCCCACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCGCTTCTGGGTGTAACTaGCTCATGGCCTGGCAAGCC | + |
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Preference number: 4 (lower is better) Translates to: PHLASKAQSMGQQSGLHSASGCN*LMAWQA Trigger: GGCTTGCCAGGCCATGAGGCAGTTACACCCAGAAGC...GGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR GCA 90 bp | CACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCAAGCTGCCAGTGGGCCTaGAGAGCCTTGGCAGTACGA | + |
|
Preference number: 4 (lower is better) Translates to: HLASKAQSMGQQSGLHSPSCQWA*RALAVR Trigger: TCGTACTGCCAAGGCTCTGCAGGCCCACTGGCAGCT...TGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR CCA 90 bp | CAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGGTTTTCCAATAGTGCCCAGGGCCTaGGAGGATGCTCGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QWASSRASTPHSGYKGFPIVPRA*EDARFC Trigger: GCAGAAGCGAGCATCCTCCCAGGCCCTGGGCACTAT...TGGAAAACCCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR CCA 90 bp | GGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGGGAAGGTCTCCAAGGTaGGCTGGCTGCTTGATCCCA | + |
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Preference number: 4 (lower is better) Translates to: GSINGPAVGPPLPTLGTRGRSPR*AGCLIP Trigger: TGGGATCAAGCAGCCAGCCCACCTTGGAGACCTTCC...CCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR CCA 90 bp | GGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGTTCATGAGCTGCCAGTaGGCCTGCAGAGCCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GSINGPAVGPPLPTLGTRFMSCQ*ACRALA Trigger: TGCCAAGGCTCTGCAGGCCCACTGGCAGCTCATGAA...CCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR CCA 90 bp | ACCCCACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCGGATCTCTCGTTTCTaGCGCCGGTCAGCCACTGTC | + |
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Preference number: 4 (lower is better) Translates to: TPPCLKGSINGPAVGPPLRISRF*RRSATV Trigger: GACAGTGGCTGACCGGCGCCAGAAACGAGAGATCCG...GAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTGGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR CCA 90 bp | GGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGAGCACGGCCAGGGTCTaGTTGTCGAAGTCTGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: GSINGPAVGPPLPTLGTRSTARV*LSKSGE Trigger: CTCTCCAGACTTCGACAACCAGACCCTGGCCGTGCT...CCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR TCA 90 bp | CAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGGTTTTCCAAAGCCAGCTTGGAGATaGCAGGGTCGTAGAGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: QWASSRASTPHSGYKGFPKPAWR*QGRRAG Trigger: CCCTGCTCTACGACCCTGTCATCTCCAAGCTGGCTT...TGGAAAACCCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR TCA 90 bp | AAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAGGTGGGCTGGCTGCTTaGTCCCACTTTGCTCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: KGSINGPAVGPPLPTLGTGGLAA*SHFAQQ Trigger: CTGCTGAGCAAAGTGGGATCAAGCAGCCAGCCCACC...TGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR TCA 90 bp | ACCCCACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCGAGAGCCCATGCCTGTaGTGCTGTCCACTAGCACCT | + |
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Preference number: 4 (lower is better) Translates to: TPPCLKGSINGPAVGPPLESPCL*CCPLAP Trigger: AGGTGCTAGTGGACAGCATCACAGGCATGGGCTCTC...GAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR GCA 90 bp | CCCCACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCAAGGTGGGCTGGCTaGTTGATCCCACTTTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: PHLASKAQSMGQQSGLHSPRWAG*LIPLCS Trigger: TGAGCAAAGTGGGATCAAGCAGCCAGCCCACCTTGG...GGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR GCA 90 bp | GGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGCCAAGGTGGGCTGGCTaGTTGATCCCACTTTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: GSINGPAVGPPLPTLGTRPRWAG*LIPLCS Trigger: TGAGCAAAGTGGGATCAAGCAGCCAGCCCACCTTGG...CCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR GCA 90 bp | GGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGTACTGTTTCATGAGCTaGCAGTGGGCCTGCAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: GSINGPAVGPPLPTLGTRYCFMS*QWACRA Trigger: GGCTCTGCAGGCCCACTGGCAGCTCATGAAACAGTA...CCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR GCA 90 bp | AGCTGGAATGACAGGGAAACTGAGGCTGGAGAATGCCCTGGTTTCTGCTACCGCTTAGGTACCGCACCATaGGGCCCCGCAGCACGGCCA | + |
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Preference number: 4 (lower is better) Translates to: SWNDRETEAGECPGFCYRLGTAP*GPAARP Trigger: TGGCCGTGCTGCGGGGCCGCATGGTGCGGTACCTAA...GCGGTAGCAGAAACCAGGGCATTCTCCAGCCTCAGTTTCCCTGTCATTCCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR CCA 90 bp | GCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGGTTTTCTTCACACGCTTaGTCAGCCCAGGGGTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: AQSMGQQSGLHSPLWVQGFSSHA*SAQGLG Trigger: CCCCAACCCCTGGGCTGACCAAGCGTGTGAAGAAAA...CCCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR CCA 90 bp | CCCCACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCTTTTCTTCACACGCTTaGTCAGCCCAGGGGTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: PHLASKAQSMGQQSGLHSFSSHA*SAQGLG Trigger: CCCCAACCCCTGGGCTGACCAAGCGTGTGAAGAAAA...GGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR CCA 90 bp | AAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAGGGCCTGCAGAGCCTTaGCAGTACGAGCCAGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: KGSINGPAVGPPLPTLGTGPAEP*QYEPGR Trigger: TCTACCTGGCTCGTACTGCCAAGGCTCTGCAGGCCC...TGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR CCA 90 bp | CAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGGTTTTCCATTCATGAGCTGCCAGTaGGCCTGCAGAGCCTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: QWASSRASTPHSGYKGFPFMSCQ*ACRALA Trigger: TGCCAAGGCTCTGCAGGCCCACTGGCAGCTCATGAA...TGGAAAACCCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR CCA 90 bp | ACCCCACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCAGCACGGCCAGGGTCTaGTTGTCGAAGTCTGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: TPPCLKGSINGPAVGPPLSTARV*LSKSGE Trigger: CTCTCCAGACTTCGACAACCAGACCCTGGCCGTGCT...GAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR TCA 90 bp | AGCTGGAATGACAGGGAAACTGAGGCTGGAGAATGCCCTGGTTTCTGCTACCGCCTTCTGCCCTGCCAGTaGCTCCTCATCCTCGGAGCG | + |
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Preference number: 4 (lower is better) Translates to: SWNDRETEAGECPGFCYRLLPCQ*LLILGA Trigger: CGCTCCGAGGATGAGGAGTCACTGGCAGGGCAGAAG...GCGGTAGCAGAAACCAGGGCATTCTCCAGCCTCAGTTTCCCTGTCATTCCAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR TCA 90 bp | CTCTCCTGGCTTCCCCATGGTGACCCCACCTTGCCTCAAAGGCTCAATCAATGGGCGTACCAGCGCTCCTaGACTTCCCGAAGGGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: LSWLPHGDPTLPQRLNQWAYQRS*TSRRVK Trigger: CTTCACCCTTCGGGAAGTTCAGGAGCGCTGGTACGC...CCATTGATTGAGCCTTTGAGGCAAGGTGGGGTCACCATGGGGAAGCCAGGAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR TCA 90 bp | AAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAGCTCCTCAGCCTTGCTaGACAGGGCCTTGCTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: KGSINGPAVGPPLPTLGTAPQPC*TGPCSE Trigger: TTCAGAGCAAGGCCCTGTTCAGCAAGGCTGAGGAGC...TGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR TCA 90 bp | GCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGGCAGGTCCTCTGCATCTaGGAAGTTGAGCACTTGGTC | + |
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Preference number: 4 (lower is better) Translates to: AQSMGQQSGLHSPLWVQGQVLCI*EVEHLV Trigger: GACCAAGTGCTCAACTTCTCAGATGCAGAGGACCTG...CCCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR GCA 90 bp | CTCTCCTGGCTTCCCCATGGTGACCCCACCTTGCCTCAAAGGCTCAATCAATGGGAGGAGGAGGTCATCTaGAGGCTTCCATCGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: LSWLPHGDPTLPQRLNQWEEEVI*RLPSAQ Trigger: CTGGGCCGATGGAAGCCTGCAGATGACCTCCTCCTC...CCATTGATTGAGCCTTTGAGGCAAGGTGGGGTCACCATGGGGAAGCCAGGAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR GCA 90 bp | GCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGGACTTTGCTCAGCAGCTaGTCCTCAGCCTTGCTGAAC | + |
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Preference number: 4 (lower is better) Translates to: AQSMGQQSGLHSPLWVQGTLLSS*SSALLN Trigger: GTTCAGCAAGGCTGAGGAGCAGCTGCTGAGCAAAGT...CCCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR GCA 90 bp | GCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGGTGCTTGATCCCACTTTaGTCAGCAGCTGCTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AQSMGQQSGLHSPLWVQGCLIPL*SAAAPQ Trigger: CTGAGGAGCAGCTGCTGAGCAAAGTGGGATCAAGCA...CCCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR GCA 90 bp | GGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGTGCTTGATCCCACTTTaGTCAGCAGCTGCTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GSINGPAVGPPLPTLGTRCLIPL*SAAAPQ Trigger: CTGAGGAGCAGCTGCTGAGCAAAGTGGGATCAAGCA...CCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR GCA 90 bp | GCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGGGCATCAGGGTGTGTATaGAGCAAGTCCTGGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: AQSMGQQSGLHSPLWVQGASGCV*SKSWKV Trigger: GACCTTCCAGGACTTGCTGCATACACACCCTGATGC...CCCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR GCA 90 bp | CACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCATACTGTTTCATGAGCTaGCAGTGGGCCTGCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HLASKAQSMGQQSGLHSPYCFMS*QWACRA Trigger: GGCTCTGCAGGCCCACTGGCAGCTCATGAAACAGTA...TGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR GCA 90 bp | CCCCACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCAGTTCCTGTTCCAGCTaGCGGATCTCTCGTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PHLASKAQSMGQQSGLHSSSCSS*RISRFW Trigger: CCAGAAACGAGAGATCCGGCAGCTGGAACAGGAACT...GGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR GCA 90 bp | CCCCACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCTGGTTGTCCTTGGTTaGTCTGCCCAGGGTTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: PHLASKAQSMGQQSGLHSLVVLG*SAQGYL Trigger: GAGATAACCCTGGGCAGAGCAACCAAGGACAACCAG...GGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR CCA 90 bp | CTCTCCTGGCTTCCCCATGGTGACCCCACCTTGCCTCAAAGGCTCAATCAATGGCCCGGGTGGAGGATTTaGCCAGGCTGCTCTCTACCA | + |
|
Preference number: 4 (lower is better) Translates to: LSWLPHGDPTLPQRLNQWPGWRI*PGCSLP Trigger: TGGTAGAGAGCAGCCTGGCCAAATCCTCCACCCGGG...CCATTGATTGAGCCTTTGAGGCAAGGTGGGGTCACCATGGGGAAGCCAGGAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR TCA 90 bp | ACCCCACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCGGTAATACTGTTTCATaGGCTGCCAGTGGGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TPPCLKGSINGPAVGPPLGNTVS*AASGPA Trigger: TGCAGGCCCACTGGCAGCTCATGAAACAGTATTACC...GAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR TCA 90 bp | CAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGGTTTTCCACAGGTCCTCTGCATCTaGGAAGTTGAGCACTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QWASSRASTPHSGYKGFPQVLCI*EVEHLV Trigger: GACCAAGTGCTCAACTTCTCAGATGCAGAGGACCTG...TGGAAAACCCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR GCA 90 bp | ACCCCACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCACTTTGCTCAGCAGCTaGTCCTCAGCCTTGCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TPPCLKGSINGPAVGPPLTLLSS*SSALLN Trigger: GTTCAGCAAGGCTGAGGAGCAGCTGCTGAGCAAAGT...GAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR GCA 90 bp | CAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGGTTTTCCAAGTTCCTGTTCCAGCTaGCGGATCTCTCGTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QWASSRASTPHSGYKGFPSSCSS*RISRFW Trigger: CCAGAAACGAGAGATCCGGCAGCTGGAACAGGAACT...TGGAAAACCCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR GCA 90 bp | CACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCAAGCACCTGCCACTTATaGAGTTCCTGTTCCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HLASKAQSMGQQSGLHSPSTCHL*SSCSSC Trigger: GCAGCTGGAACAGGAACTGCATAAGTGGCAGGTGCT...TGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR GCA 90 bp | CAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGGTTTTCCAAGCACCTGCCACTTATaGAGTTCCTGTTCCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QWASSRASTPHSGYKGFPSTCHL*SSCSSC Trigger: GCAGCTGGAACAGGAACTGCATAAGTGGCAGGTGCT...TGGAAAACCCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR GCA 90 bp | CCCCACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCTGTCCACTAGCACCTaGCACTTATGCAGTTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PHLASKAQSMGQQSGLHSLSTST*HLCSSC Trigger: ACAGGAACTGCATAAGTGGCAGGTGCTAGTGGACAG...GGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR GCA 90 bp | CACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCATGTCCTTGGTTGCTCTaGCCAGGGTTATCTCACGAG | + |
|
Preference number: 4 (lower is better) Translates to: HLASKAQSMGQQSGLHSPCPWLL*PGLSHE Trigger: CTCGTGAGATAACCCTGGGCAGAGCAACCAAGGACA...TGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR CCA 90 bp | AGCTGGAATGACAGGGAAACTGAGGCTGGAGAATGCCCTGGTTTCTGCTACCGCATAGTGCCCAGGGCCTaGGAGGATGCTCGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SWNDRETEAGECPGFCYRIVPRA*EDARFC Trigger: GCAGAAGCGAGCATCCTCCCAGGCCCTGGGCACTAT...GCGGTAGCAGAAACCAGGGCATTCTCCAGCCTCAGTTTCCCTGTCATTCCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR CCA 90 bp | ACCCCACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCATCGGCCCAGATCCTTaGTCACCTGAAGTGGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TPPCLKGSINGPAVGPPLIGPDP*SPEVAV Trigger: AACAGCCACTTCAGGTGACCAAGGATCTGGGCCGAT...GAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR CCA 90 bp | CAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGGTTTTCCAATCGGCCCAGATCCTTaGTCACCTGAAGTGGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QWASSRASTPHSGYKGFPIGPDP*SPEVAV Trigger: AACAGCCACTTCAGGTGACCAAGGATCTGGGCCGAT...TGGAAAACCCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR CCA 90 bp | GCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGGTCTGAATGGCTGCAATaGCTTCTGGGTGTAACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AQSMGQQSGLHSPLWVQGSEWLQ*LLGVTA Trigger: GGCAGTTACACCCAGAAGCCATTGCAGCCATTCAGA...CCCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR CCA 90 bp | AGCTGGAATGACAGGGAAACTGAGGCTGGAGAATGCCCTGGTTTCTGCTACCGCCGGATCTCTCGTTTCTaGCGCCGGTCAGCCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SWNDRETEAGECPGFCYRRISRF*RRSATV Trigger: GACAGTGGCTGACCGGCGCCAGAAACGAGAGATCCG...GCGGTAGCAGAAACCAGGGCATTCTCCAGCCTCAGTTTCCCTGTCATTCCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR CCA 90 bp | CACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTGGTTGTCGAAGTCTaGAGAGCCCATGCCTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: HLASKAQSMGQQSGLHSPLVVEV*RAHACD Trigger: ATCACAGGCATGGGCTCTCCAGACTTCGACAACCAG...TGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR CCA 90 bp | CAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGGTTTTCCACTGGTTGTCGAAGTCTaGAGAGCCCATGCCTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: QWASSRASTPHSGYKGFPLVVEV*RAHACD Trigger: ATCACAGGCATGGGCTCTCCAGACTTCGACAACCAG...TGGAAAACCCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR CCA 90 bp | CACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCAAGACGAATCGCAGGCTaGCGATCTCTACCACAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: HLASKAQSMGQQSGLHSPRRIAG*RSLPQS Trigger: ACTCTGTGGTAGAGATCGCCAGCCTGCGATTCGTCT...TGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR CCA 90 bp | ACCCCACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCAGACGAATCGCAGGCTaGCGATCTCTACCACAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TPPCLKGSINGPAVGPPLRRIAG*RSLPQS Trigger: ACTCTGTGGTAGAGATCGCCAGCCTGCGATTCGTCT...GAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR TCA 90 bp | GGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGCATCTCGCATGTCCTTaGGCTTACTGTCGTCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: GSINGPAVGPPLPTLGTRHLACP*AYCRQS Trigger: TGATTGACGACAGTAAGCTCAAGGACATGCGAGATG...CCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR GCA 90 bp | GGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGCCTGAAGTGGCTGTTTaGTTTTCTTCACACGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSINGPAVGPPLPTLGTRPEVAV*FSSHAW Trigger: CCAAGCGTGTGAAGAAAAGCAAACAGCCACTTCAGG...CCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR GCA 90 bp | AGCTGGAATGACAGGGAAACTGAGGCTGGAGAATGCCCTGGTTTCTGCTACCGCGCTTCTGGGTGTAACTaGCTCATGGCCTGGCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SWNDRETEAGECPGFCYRASGCN*LMAWQA Trigger: GGCTTGCCAGGCCATGAGGCAGTTACACCCAGAAGC...GCGGTAGCAGAAACCAGGGCATTCTCCAGCCTCAGTTTCCCTGTCATTCCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR GCA 90 bp | CACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTGTCCACTAGCACCTaGCACTTATGCAGTTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HLASKAQSMGQQSGLHSPLSTST*HLCSSC Trigger: ACAGGAACTGCATAAGTGGCAGGTGCTAGTGGACAG...TGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR CCA 90 bp | CCCCACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCGAGTACTGGGAGCCTTaGATACCTTCTTCTTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PHLASKAQSMGQQSGLHSEYWEP*IPSSSH Trigger: GTGAGAAGAAGAAGGTATCCAAGGCTCCCAGTACTC...GGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR CCA 90 bp | CCCCACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCAACTTCACACCCAGGTaGACAGATGTCAGGTCGTTA | + |
|
Preference number: 4 (lower is better) Translates to: PHLASKAQSMGQQSGLHSNFTPR*TDVRSL Trigger: TAACGACCTGACATCTGTCCACCTGGGTGTGAAGTT...GGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR CCA 90 bp | ACCCCACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCAGGTCCACGTCAATCTaGTTGTCCTTGGTTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TPPCLKGSINGPAVGPPLRSTSI*LSLVAL Trigger: CAGAGCAACCAAGGACAACCAGATTGACGTGGACCT...GAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR TCA 90 bp | TCATCTCGCATGTCCTTGAGCTTACTGTCGTCAATCAGGTCCTCTGCATCTGAGCTTCTGCCCTGCCAGTaGCTCCTCATCCTCGGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SSRMSLSLLSSIRSSASELLPCQ*LLILGA Trigger: CGCTCCGAGGATGAGGAGTCACTGGCAGGGCAGAAG...CTCAGATGCAGAGGACCTGATTGACGACAGTAAGCTCAAGGACATGCGAGATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229399.2 |
||
| CDS-3UTR TCA 90 bp | CTCTCCTGGCTTCCCCATGGTGACCCCACCTTGCCTCAAAGGCTCAATCAATGGAACAGGGCCTTGCTCTaGATGGCTGCAATGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSWLPHGDPTLPQRLNQWNRALL*MAAMAS Trigger: AGAAGCCATTGCAGCCATTCAGAGCAAGGCCCTGTT...CCATTGATTGAGCCTTTGAGGCAAGGTGGGGTCACCATGGGGAAGCCAGGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR TCA 90 bp | CAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGGTTTTCCACATCTCGCATGTCCTTaGGCTTACTGTCGTCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: QWASSRASTPHSGYKGFPHLACP*AYCRQS Trigger: TGATTGACGACAGTAAGCTCAAGGACATGCGAGATG...TGGAAAACCCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR CCA 90 bp | ACCCCACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCGAGTACTGGGAGCCTTaGATACCTTCTTCTTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TPPCLKGSINGPAVGPPLEYWEP*IPSSSH Trigger: GTGAGAAGAAGAAGGTATCCAAGGCTCCCAGTACTC...GAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR CCA 90 bp | GGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGCTTGGTCACCTGAAGTaGCTGTTTGCTTTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GSINGPAVGPPLPTLGTRLGHLK*LFAFLH Trigger: GTGAAGAAAAGCAAACAGCCACTTCAGGTGACCAAG...CCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR CCA 90 bp | AGCTGGAATGACAGGGAAACTGAGGCTGGAGAATGCCCTGGTTTCTGCTACCGCGGGCCTTGCTCTGAATaGCTGCAATGGCTTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SWNDRETEAGECPGFCYRGPCSE*LQWLLG Trigger: ACCCAGAAGCCATTGCAGCCATTCAGAGCAAGGCCC...GCGGTAGCAGAAACCAGGGCATTCTCCAGCCTCAGTTTCCCTGTCATTCCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR CCA 90 bp | CAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGGTTTTCCAAGGGCAATGAGGTCCTaGTTGATGAGGAAGACGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QWASSRASTPHSGYKGFPRAMRS*LMRKTN Trigger: ATTCGTCTTCCTCATCAACCAGGACCTCATTGCCCT...TGGAAAACCCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR TCA 90 bp | AGCTGGAATGACAGGGAAACTGAGGCTGGAGAATGCCCTGGTTTCTGCTACCGCAACAGGGCCTTGCTCTaGATGGCTGCAATGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SWNDRETEAGECPGFCYRNRALL*MAAMAS Trigger: AGAAGCCATTGCAGCCATTCAGAGCAAGGCCCTGTT...GCGGTAGCAGAAACCAGGGCATTCTCCAGCCTCAGTTTCCCTGTCATTCCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR GCA 90 bp | TTACTGTCGTCAATCAGGTCCTCTGCATCTGAGAAGTTGAGCACTTGGTCCCCCGAGGATGCTCGCTTCTaGCCTGCCAGTGACTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLSSIRSSASEKLSTWSPEDARF*PASDSS Trigger: TGAGGAGTCACTGGCAGGGCAGAAGCGAGCATCCTC...GGGGGACCAAGTGCTCAACTTCTCAGATGCAGAGGACCTGATTGACGACAGTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229399.2 |
||
| CDS-3UTR GCA 90 bp | AGCTGGAATGACAGGGAAACTGAGGCTGGAGAATGCCCTGGTTTCTGCTACCGCTGTCCTTGGTTGCTCTaGCCAGGGTTATCTCACGAG | + |
|
Preference number: 4 (lower is better) Translates to: SWNDRETEAGECPGFCYRCPWLL*PGLSHE Trigger: CTCGTGAGATAACCCTGGGCAGAGCAACCAAGGACA...GCGGTAGCAGAAACCAGGGCATTCTCCAGCCTCAGTTTCCCTGTCATTCCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR CCA 90 bp | TCATCTCGCATGTCCTTGAGCTTACTGTCGTCAATCAGGTCCTCTGCATCTGAGATAGTGCCCAGGGCCTaGGAGGATGCTCGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSRMSLSLLSSIRSSASEIVPRA*EDARFC Trigger: GCAGAAGCGAGCATCCTCCCAGGCCCTGGGCACTAT...CTCAGATGCAGAGGACCTGATTGACGACAGTAAGCTCAAGGACATGCGAGATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229399.2 |
||
| CDS-3UTR CCA 90 bp | CACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTTGGTCACCTGAAGTaGCTGTTTGCTTTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: HLASKAQSMGQQSGLHSPLGHLK*LFAFLH Trigger: GTGAAGAAAAGCAAACAGCCACTTCAGGTGACCAAG...TGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR CCA 90 bp | AAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAACTTCACACCCAGGTaGACAGATGTCAGGTCGTTA | + |
|
Preference number: 4 (lower is better) Translates to: KGSINGPAVGPPLPTLGTNFTPR*TDVRSL Trigger: TAACGACCTGACATCTGTCCACCTGGGTGTGAAGTT...TGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR CCA 90 bp | CTCTCCTGGCTTCCCCATGGTGACCCCACCTTGCCTCAAAGGCTCAATCAATGGAGGTCCACGTCAATCTaGTTGTCCTTGGTTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSWLPHGDPTLPQRLNQWRSTSI*LSLVAL Trigger: CAGAGCAACCAAGGACAACCAGATTGACGTGGACCT...CCATTGATTGAGCCTTTGAGGCAAGGTGGGGTCACCATGGGGAAGCCAGGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR CCA 90 bp | AGCTGGAATGACAGGGAAACTGAGGCTGGAGAATGCCCTGGTTTCTGCTACCGCTCTGAATGGCTGCAATaGCTTCTGGGTGTAACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SWNDRETEAGECPGFCYRSEWLQ*LLGVTA Trigger: GGCAGTTACACCCAGAAGCCATTGCAGCCATTCAGA...GCGGTAGCAGAAACCAGGGCATTCTCCAGCCTCAGTTTCCCTGTCATTCCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR TCA 90 bp | ACAAAAACAAAAAGGAGTCTAAAGCTGACTCACTGGAGACACAGGAGTGACAATGCGGCTGGCTGTGCCTaGCGCCATCAGGGACGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TKTKRSLKLTHWRHRSDNAAGCA*RHQGRV Trigger: GACTCGTCCCTGATGGCGTCAGGCACAGCCAGCCGC...ATTGTCACTCCTGTGTCTCCAGTGAGTCAGCTTTAGACTCCTTTTTGTTTTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041190.17 |
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| CDS-3UTR CCA 90 bp | TCATCTCGCATGTCCTTGAGCTTACTGTCGTCAATCAGGTCCTCTGCATCTGAGTTTTCTTCACACGCTTaGTCAGCCCAGGGGTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSRMSLSLLSSIRSSASEFSSHA*SAQGLG Trigger: CCCCAACCCCTGGGCTGACCAAGCGTGTGAAGAAAA...CTCAGATGCAGAGGACCTGATTGACGACAGTAAGCTCAAGGACATGCGAGATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229399.2 |
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| CDS-3UTR CCA 90 bp | AGCTTACTGTCGTCAATCAGGTCCTCTGCATCTGAGAAGTTGAGCACTTGGTCCGTGGGCCCAGATCCTTaGTCACCTGAAGTGGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLLSSIRSSASEKLSTWSVGPDP*SPEVAV Trigger: AACAGCCACTTCAGGTGACCAAGGATCTGGGCCCAC...GGACCAAGTGCTCAACTTCTCAGATGCAGAGGACCTGATTGACGACAGTAAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229399.2 |
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| CDS-3UTR CCA 90 bp | TCTCGCATGTCCTTGAGCTTACTGTCGTCAATCAGGTCCTCTGCATCTGAGAAGTTCATGAGCTGCCAGTaGGCCCAGATCCTTGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SRMSLSLLSSIRSSASEKFMSCQ*AQILGH Trigger: GTGACCAAGGATCTGGGCCCACTGGCAGCTCATGAA...CTTCTCAGATGCAGAGGACCTGATTGACGACAGTAAGCTCAAGGACATGCGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229399.2 |
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| CDS-3UTR TCA 90 bp | CGCATGTCCTTGAGCTTACTGTCGTCAATCAGGTCCTCTGCATCTGAGAAGTTGGGTAATACTGTTTCATaGGCTGCCAGTGGGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RMSLSLLSSIRSSASEKLGNTVS*AASGPR Trigger: TCTGGGCCCACTGGCAGCTCATGAAACAGTATTACC...CAACTTCTCAGATGCAGAGGACCTGATTGACGACAGTAAGCTCAAGGACATGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229399.2 |
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| CDS-3UTR GCA 90 bp | TTACTGTCGTCAATCAGGTCCTCTGCATCTGAGAAGTTGAGCACTTGGTCCCCCTACTGTTTCATGAGCTaGCAGTGGGCCCAGATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLSSIRSSASEKLSTWSPYCFMS*QWAQIL Trigger: AAGGATCTGGGCCCACTGGCAGCTCATGAAACAGTA...GGGGGACCAAGTGCTCAACTTCTCAGATGCAGAGGACCTGATTGACGACAGTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229399.2 |
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| CDS-3UTR GCA 90 bp | TCTCGCATGTCCTTGAGCTTACTGTCGTCAATCAGGTCCTCTGCATCTGAGAAGCCTGAAGTGGCTGTTTaGTTTTCTTCACACGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRMSLSLLSSIRSSASEKPEVAV*FSSHAW Trigger: CCAAGCGTGTGAAGAAAAGCAAACAGCCACTTCAGG...CTTCTCAGATGCAGAGGACCTGATTGACGACAGTAAGCTCAAGGACATGCGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229399.2 |
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| CDS-3UTR CCA 90 bp | ATGTCCTTGAGCTTACTGTCGTCAATCAGGTCCTCTGCATCTGAGAAGTTGAGCGAGTACTGGGAGCCTTaGATACCTTCTTCTTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: MSLSLLSSIRSSASEKLSEYWEP*IPSSSH Trigger: GTGAGAAGAAGAAGGTATCCAAGGCTCCCAGTACTC...GCTCAACTTCTCAGATGCAGAGGACCTGATTGACGACAGTAAGCTCAAGGACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229399.2 |
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| CDS-3UTR CCA 90 bp | TCATCTCGCATGTCCTTGAGCTTACTGTCGTCAATCAGGTCCTCTGCATCTGAGCTTGGTCACCTGAAGTaGCTGTTTGCTTTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSRMSLSLLSSIRSSASELGHLK*LFAFLH Trigger: GTGAAGAAAAGCAAACAGCCACTTCAGGTGACCAAG...CTCAGATGCAGAGGACCTGATTGACGACAGTAAGCTCAAGGACATGCGAGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229399.2 |
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| CDS-3UTR CCA 90 bp | ACAAAAACAAAAAGGAGTCTAAAGCTGACTCACTGGAGACACAGGAGTGACAATGGAAGGTCTCCAAGGTaGGCTGGCTGCTTGATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TKTKRSLKLTHWRHRSDNGRSPR*AGCLIP Trigger: TGGGATCAAGCAGCCAGCCCACCTTGGAGACCTTCC...ATTGTCACTCCTGTGTCTCCAGTGAGTCAGCTTTAGACTCCTTTTTGTTTTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR CCA 90 bp | ACAAAAACAAAAAGGAGTCTAAAGCTGACTCACTGGAGACACAGGAGTGACAATGGGCCTTGCTCTGAATaGCTGCAATGGCTTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TKTKRSLKLTHWRHRSDNGPCSE*LQWLLG Trigger: ACCCAGAAGCCATTGCAGCCATTCAGAGCAAGGCCC...ATTGTCACTCCTGTGTCTCCAGTGAGTCAGCTTTAGACTCCTTTTTGTTTTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR TCA 90 bp | ACAAAAACAAAAAGGAGTCTAAAGCTGACTCACTGGAGACACAGGAGTGACAATGGTAATACTGTTTCATaGGCTGCCAGTGGGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TKTKRSLKLTHWRHRSDNGNTVS*AASGPA Trigger: TGCAGGCCCACTGGCAGCTCATGAAACAGTATTACC...ATTGTCACTCCTGTGTCTCCAGTGAGTCAGCTTTAGACTCCTTTTTGTTTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR GCA 90 bp | ACAAAAACAAAAAGGAGTCTAAAGCTGACTCACTGGAGACACAGGAGTGACAATGCATCAGGGTGTGTATaGAGCAAGTCCTGGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TKTKRSLKLTHWRHRSDNASGCV*SKSWKV Trigger: GACCTTCCAGGACTTGCTGCATACACACCCTGATGC...ATTGTCACTCCTGTGTCTCCAGTGAGTCAGCTTTAGACTCCTTTTTGTTTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR GCA 90 bp | ACAAAAACAAAAAGGAGTCTAAAGCTGACTCACTGGAGACACAGGAGTGACAATCTGGTTGTCCTTGGTTaGTCTGCCCAGGGTTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: TKTKRSLKLTHWRHRSDNLVVLG*SAQGYL Trigger: GAGATAACCCTGGGCAGAGCAACCAAGGACAACCAG...ATTGTCACTCCTGTGTCTCCAGTGAGTCAGCTTTAGACTCCTTTTTGTTTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR GCA 90 bp | ACAAAAACAAAAAGGAGTCTAAAGCTGACTCACTGGAGACACAGGAGTGACAATCCTGAAGTGGCTGTTTaGTTTTCTTCACACGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TKTKRSLKLTHWRHRSDNPEVAV*FSSHAW Trigger: CCAAGCGTGTGAAGAAAAGCAAACAGCCACTTCAGG...ATTGTCACTCCTGTGTCTCCAGTGAGTCAGCTTTAGACTCCTTTTTGTTTTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS CCA 90 bp | ATGCTCGCTTCTGCCCTGCCAGTGACTCCTCATCCTCGGAGCGGCTaGCTGTGCCTGACGCCATCAGGGACGAGTCTAGCAGCCCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: MLASALPVTPHPRSG*LCLTPSGTSLAAPE Trigger: CTCAGGGGCTGCTAGACTCGTCCCTGATGGCGTCAGGCACAGCCAGCCGCTCCGAGGATGAGGAGTCACTGGCAGGGCAGAAGCGAGCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000229359.2 |
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| CDS GCA 90 bp | CTCTGCCCAGGGTTATCTCACGAGAGCGCATTAGGTACCGCACCATaGGGCCCCGCAGCACGGCCAGGGTCTGGTTGTCGAAGTCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LCPGLSHESALGTAP*GPAARPGSGCRSLE Trigger: CTCCAGACTTCGACAACCAGACCCTGGCCGTGCTGCGGGGCCGCATGGTGCGGTACCTAATGCGCTCTCGTGAGATAACCCTGGGCAGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS CCA 90 bp | CTGAGCAGCGGCCTGACTCCACCCCGCCGGCCCCCTTCACCCGGGTaGAGGATTTGGCCAGGCTGCTCTCTACCAGTTCATCATCGAATT | + |
|
Preference number: 5 (lower is better) Translates to: LSSGLTPPRRPPSPG*RIWPGCSLPVHHRI Trigger: AATTCGATGATGAACTGGTAGAGAGCAGCCTGGCCAAATCCTCCACCCGGGTGAAGGGGGCCGGCGGGGTGGAGTCAGGCCGCTGCTCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 ENSMUST00000229399.2 ENSMUST00000229926.2 |
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| CDS CCA 90 bp | CGCATTAGGTACCGCACCATGCGGCCCCGCAGCACGGCCAGGGTCTaGTTGTCGAAGTCTGGAGAGCCCATGCCTGTGATGCTGTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: RIRYRTMRPRSTARV*LSKSGEPMPVMLST Trigger: AGTGGACAGCATCACAGGCATGGGCTCTCCAGACTTCGACAACCAGACCCTGGCCGTGCTGCGGGGCCGCATGGTGCGGTACCTAATGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR CAA 90 bp | GGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGGAGGAGCTTCTGCGTTaGGGGATAGTGCCCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GSINGPAVGPPLPTLGTREELLR*GIVPRA Trigger: GGCCCTGGGCACTATCCCCAAACGCAGAAGCTCCTC...CCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS GCA 90 bp | GCTTCTGCCCTGCCAGTGACTCCTCATCCTCGGAGCGGCTGGCTGTaGCTGACGCCATCAGGGACGAGTCTAGCAGCCCCTGAGAATCTT | + |
|
Preference number: 5 (lower is better) Translates to: ASALPVTPHPRSGWL*LTPSGTSLAAPENL Trigger: AAGATTCTCAGGGGCTGCTAGACTCGTCCCTGATGGCGTCAGGCACAGCCAGCCGCTCCGAGGATGAGGAGTCACTGGCAGGGCAGAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000229359.2 |
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| CDS-3UTR CAA 90 bp | ACCCCACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCGAGGAGCTTCTGCGTTaGGGGATAGTGCCCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TPPCLKGSINGPAVGPPLEELLR*GIVPRA Trigger: GGCCCTGGGCACTATCCCCAAACGCAGAAGCTCCTC...GAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTGGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR CAA 90 bp | CAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGGTTTTCCAACCCGGGTGGAGGATTaGGCCAGGCTGCTCTCTACC | + |
|
Preference number: 5 (lower is better) Translates to: QWASSRASTPHSGYKGFPTRVED*ARLLST Trigger: GGTAGAGAGCAGCCTGGCCAAATCCTCCACCCGGGT...TGGAAAACCCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR CAA 90 bp | CCCCACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCAGCTGCTCCTCAGCCTaGCTGAACAGGGCCTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PHLASKAQSMGQQSGLHSSCSSA*LNRALL Trigger: GAGCAAGGCCCTGTTCAGCAAGGCTGAGGAGCAGCT...GGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR CAA 90 bp | CAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGGTTTTCCAGGCCGCCGGCCCTCGTaGGCAATGAAGAAGTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: QWASSRASTPHSGYKGFPGRRPS*AMKKSP Trigger: TGGTGACTTCTTCATTGCCAACGAGGGCCGGCGGCC...TGGAAAACCCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS CCA 90 bp | ATGAACCTGGAGGAGCTTCTGCGTTTGGGGATAGTGCCCAGGGCCTaGGAGGATGCTCGCTTCTGCCCTGCCAGTGACTCCTCATCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: MNLEELLRLGIVPRA*EDARFCPASDSSSS Trigger: CGAGGATGAGGAGTCACTGGCAGGGCAGAAGCGAGCATCCTCCCAGGCCCTGGGCACTATCCCCAAACGCAGAAGCTCCTCCAGGTTCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 ENSMUST00000229359.2 ENSMUST00000229399.2 ENSMUST00000229926.2 |
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| CDS-3UTR CAA 90 bp | GGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGCTTTTCTTCACACGCTaGGTCAGCCCAGGGGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GSINGPAVGPPLPTLGTRLFFTR*VSPGVG Trigger: CCCAACCCCTGGGCTGACCAAGCGTGTGAAGAAAAG...CCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR CAA 90 bp | CCCCACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCAGGTGGGCTGGCTGCTaGATCCCACTTTGCTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PHLASKAQSMGQQSGLHSRWAGC*IPLCSA Trigger: TGCTGAGCAAAGTGGGATCAAGCAGCCAGCCCACCT...GGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS CCA 90 bp | GGCCTGACTCCACCCCGCCGGCCCCCTTCACCCGGGTGGAGGATTTaGCCAGGCTGCTCTCTACCAGTTCATCATCGAATTTCTTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GLTPPRRPPSPGWRI*PGCSLPVHHRISSF Trigger: AAAGGAAGAAATTCGATGATGAACTGGTAGAGAGCAGCCTGGCCAAATCCTCCACCCGGGTGAAGGGGGCCGGCGGGGTGGAGTCAGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 ENSMUST00000229399.2 ENSMUST00000229926.2 |
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| CDS CCA 90 bp | TACCACAGAGTTGTTGCTAAGGCGCCACTTGGAGCCGCACAGCACTaGTCGCCCATCGATATAGATGGGCCGCCGGCCCTCGTTGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: YHRVVAKAPLGAAQH*SPIDIDGPPALVGN Trigger: ATTGCCAACGAGGGCCGGCGGCCCATCTATATCGATGGGCGACCAGTGCTGTGCGGCTCCAAGTGGCGCCTTAGCAACAACTCTGTGGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR CAA 90 bp | CTCTCCTGGCTTCCCCATGGTGACCCCACCTTGCCTCAAAGGCTCAATCAATGGACCCGGGTGGAGGATTaGGCCAGGCTGCTCTCTACC | + |
|
Preference number: 5 (lower is better) Translates to: LSWLPHGDPTLPQRLNQWTRVED*ARLLST Trigger: GGTAGAGAGCAGCCTGGCCAAATCCTCCACCCGGGT...CCATTGATTGAGCCTTTGAGGCAAGGTGGGGTCACCATGGGGAAGCCAGGAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR CAA 90 bp | AAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGCTGCTCCTCAGCCTaGCTGAACAGGGCCTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KGSINGPAVGPPLPTLGTSCSSA*LNRALL Trigger: GAGCAAGGCCCTGTTCAGCAAGGCTGAGGAGCAGCT...TGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR CAA 90 bp | GCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGGTCCACGTCAATCTGGTaGTCCTTGGTTGCTCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: AQSMGQQSGLHSPLWVQGSTSIW*SLVALP Trigger: GGGCAGAGCAACCAAGGACAACCAGATTGACGTGGA...CCCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR CAA 90 bp | CTCTCCTGGCTTCCCCATGGTGACCCCACCTTGCCTCAAAGGCTCAATCAATGGCACTGTGGGGTGATCTaGGCAGCCTCAGCCCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LSWLPHGDPTLPQRLNQWHCGVI*AASARM Trigger: CATCCGGGCTGAGGCTGCCAAGATCACCCCACAGTG...CCATTGATTGAGCCTTTGAGGCAAGGTGGGGTCACCATGGGGAAGCCAGGAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS CCA 90 bp | GGGGTGATCTTGGCAGCCTCAGCCCGGATGAGGGCAATGAGGTCCTaGTTGATGAGGAAGACGAATCGCAGGCTGGCGATCTCTACCACA | + |
|
Preference number: 5 (lower is better) Translates to: GVILAASARMRAMRS*LMRKTNRRLAISTT Trigger: TGTGGTAGAGATCGCCAGCCTGCGATTCGTCTTCCTCATCAACCAGGACCTCATTGCCCTCATCCGGGCTGAGGCTGCCAAGATCACCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR CAA 90 bp | GGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGGTCTGCAGCACAGCATaGATGAGGAGGAGGTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: GSINGPAVGPPLPTLGTRVCSTA*MRRRSS Trigger: AGATGACCTCCTCCTCATCAATGCTGTGCTGCAGAC...CCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR CAA 90 bp | GGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGTCTGGTTGTCCTTGGTaGCTCTGCCCAGGGTTATCT | + |
|
Preference number: 5 (lower is better) Translates to: GSINGPAVGPPLPTLGTRSGCPW*LCPGLS Trigger: AGATAACCCTGGGCAGAGCAACCAAGGACAACCAGA...CCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR CAA 90 bp | AGCTGGAATGACAGGGAAACTGAGGCTGGAGAATGCCCTGGTTTCTGCTACCGCGGCCGCCGGCCCTCGTaGGCAATGAAGAAGTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: SWNDRETEAGECPGFCYRGRRPS*AMKKSP Trigger: TGGTGACTTCTTCATTGCCAACGAGGGCCGGCGGCC...GCGGTAGCAGAAACCAGGGCATTCTCCAGCCTCAGTTTCCCTGTCATTCCAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR CAA 90 bp | GGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGTCTACCACAGAGTTGTaGCTAAGGCGCCACTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GSINGPAVGPPLPTLGTRSTTEL*LRRHLE Trigger: CTCCAAGTGGCGCCTTAGCAACAACTCTGTGGTAGA...CCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS TCA 90 bp | TTGCTCAGCAGCTGCTCCTCAGCCTTGCTGAACAGGGCCTTGCTCTaGATGGCTGCAATGGCTTCTGGGTGTAACTGCCTCATGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLSSCSSALLNRALL*MAAMASGCNCLMAW Trigger: CCAGGCCATGAGGCAGTTACACCCAGAAGCCATTGCAGCCATTCAGAGCAAGGCCCTGTTCAGCAAGGCTGAGGAGCAGCTGCTGAGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS GCA 90 bp | ATGCTGTCCACTAGCACCTGCCACTTATGCAGTTCCTGTTCCAGCTaGCGGATCTCTCGTTTCTGGCGCCGGTCAGCCACTGTCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: MLSTSTCHLCSSCSS*RISRFWRRSATVSS Trigger: TGAGCTGACAGTGGCTGACCGGCGCCAGAAACGAGAGATCCGGCAGCTGGAACAGGAACTGCATAAGTGGCAGGTGCTAGTGGACAGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS CCA 90 bp | GAGATCTTCCAAGCCGGACCCTCCAGAGACAGGTCCACGTCAATCTaGTTGTCCTTGGTTGCTCTGCCCAGGGTTATCTCACGAGAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: EIFQAGPSRDRSTSI*LSLVALPRVISRER Trigger: GCGCTCTCGTGAGATAACCCTGGGCAGAGCAACCAAGGACAACCAGATTGACGTGGACCTGTCTCTGGAGGGTCCGGCTTGGAAGATCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR CAA 90 bp | CACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCAGTCTGCAGCACAGCATaGATGAGGAGGAGGTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: HLASKAQSMGQQSGLHSPVCSTA*MRRRSS Trigger: AGATGACCTCCTCCTCATCAATGCTGTGCTGCAGAC...TGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR CAA 90 bp | CTCTCCTGGCTTCCCCATGGTGACCCCACCTTGCCTCAAAGGCTCAATCAATGGAGGTGGGCTGGCTGCTaGATCCCACTTTGCTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LSWLPHGDPTLPQRLNQWRWAGC*IPLCSA Trigger: TGCTGAGCAAAGTGGGATCAAGCAGCCAGCCCACCT...CCATTGATTGAGCCTTTGAGGCAAGGTGGGGTCACCATGGGGAAGCCAGGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR CAA 90 bp | CACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCATCTACCACAGAGTTGTaGCTAAGGCGCCACTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: HLASKAQSMGQQSGLHSPSTTEL*LRRHLE Trigger: CTCCAAGTGGCGCCTTAGCAACAACTCTGTGGTAGA...TGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR CAA 90 bp | CCCCACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCATCTCTACCACAGAGTaGTTGCTAAGGCGCCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: PHLASKAQSMGQQSGLHSISTTE*LLRRHL Trigger: CAAGTGGCGCCTTAGCAACAACTCTGTGGTAGAGAT...GGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR CAA 90 bp | GCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCACTCTGGGTACAAGGGATCTCTACCACAGAGTaGTTGCTAAGGCGCCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: AQSMGQQSGLHSPLWVQGISTTE*LLRRHL Trigger: CAAGTGGCGCCTTAGCAACAACTCTGTGGTAGAGAT...CCCTTGTACCCAGAGTGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS TCA 90 bp | AGGAGGTCATCTGCAGGCTTCCATCGGCCCAGATCCTTGGTCACCTaGAGTGGCTGTTTGCTTTTCTTCACACGCTTGGTCAGCCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RRSSAGFHRPRSLVT*SGCLLFFTRLVSPG Trigger: CCCTGGGCTGACCAAGCGTGTGAAGAAAAGCAAACAGCCACTTCAGGTGACCAAGGATCTGGGCCGATGGAAGCCTGCAGATGACCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 ENSMUST00000229671.2 ENSMUST00000229926.2 |
||
| CDS TCA 90 bp | GCAGTGGCTGCACTGTCTGATCCTCGAGTAGGTAATACTGTTTCATaGGCTGCCAGTGGGCCTGCAGAGCCTTGGCAGTACGAGCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: AVAALSDPRVGNTVS*AASGPAEPWQYEPG Trigger: ACCTGGCTCGTACTGCCAAGGCTCTGCAGGCCCACTGGCAGCTCATGAAACAGTATTACCTACTCGAGGATCAGACAGTGCAGCCACTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS GCA 90 bp | CAGGTCGTTAGTCTGCAGCACAGCATTGATGAGGAGGAGGTCATCTaGAGGCTTCCATCGGCCCAGATCCTTGGTCACCTGAAGTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QVVSLQHSIDEEEVI*RLPSAQILGHLKWL Trigger: CAGCCACTTCAGGTGACCAAGGATCTGGGCCGATGGAAGCCTGCAGATGACCTCCTCCTCATCAATGCTGTGCTGCAGACTAACGACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 ENSMUST00000229671.2 |
||
| CDS CCA 90 bp | GTCATCTGCAGGCTTCCATCGGCCCAGATCCTTGGTCACCTGAAGTaGCTGTTTGCTTTTCTTCACACGCTTGGTCAGCCCAGGGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: VICRLPSAQILGHLK*LFAFLHTLGQPRGW Trigger: CCAACCCCTGGGCTGACCAAGCGTGTGAAGAAAAGCAAACAGCCACTTCAGGTGACCAAGGATCTGGGCCGATGGAAGCCTGCAGATGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 ENSMUST00000229671.2 ENSMUST00000229926.2 |
||
| CDS CCA 90 bp | AAGCCGGACCCTCCAGAGACAGGTCCACGTCAATCTGGTTGTCCTTaGTTGCTCTGCCCAGGGTTATCTCACGAGAGCGCATTAGGTACC | + |
|
Preference number: 5 (lower is better) Translates to: KPDPPETGPRQSGCP*LLCPGLSHESALGT Trigger: GGTACCTAATGCGCTCTCGTGAGATAACCCTGGGCAGAGCAACCAAGGACAACCAGATTGACGTGGACCTGTCTCTGGAGGGTCCGGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR CAA 90 bp | TTACTGTCGTCAATCAGGTCCTCTGCATCTGAGAAGTTGAGCACTTGGTCCCCCACCCGGGTGGAGGATTaGGCCAGGCTGCTCTCTACC | + |
|
Preference number: 5 (lower is better) Translates to: LLSSIRSSASEKLSTWSPTRVED*ARLLST Trigger: GGTAGAGAGCAGCCTGGCCAAATCCTCCACCCGGGT...GGGGGACCAAGTGCTCAACTTCTCAGATGCAGAGGACCTGATTGACGACAGTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229399.2 |
||
| CDS-3UTR CAA 90 bp | AGCTGGAATGACAGGGAAACTGAGGCTGGAGAATGCCCTGGTTTCTGCTACCGCCTTTTCTTCACACGCTaGGTCAGCCCAGGGGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SWNDRETEAGECPGFCYRLFFTR*VSPGVG Trigger: CCCAACCCCTGGGCTGACCAAGCGTGTGAAGAAAAG...GCGGTAGCAGAAACCAGGGCATTCTCCAGCCTCAGTTTCCCTGTCATTCCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR CAA 90 bp | CTCTCCTGGCTTCCCCATGGTGACCCCACCTTGCCTCAAAGGCTCAATCAATGGCTGCTTGATCCCACTTaGCTCAGCAGCTGCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LSWLPHGDPTLPQRLNQWLLDPT*LSSCSS Trigger: TGAGGAGCAGCTGCTGAGCAAAGTGGGATCAAGCAG...CCATTGATTGAGCCTTTGAGGCAAGGTGGGGTCACCATGGGGAAGCCAGGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR CAA 90 bp | CTCTCCTGGCTTCCCCATGGTGACCCCACCTTGCCTCAAAGGCTCAATCAATGGTCTGGTTGTCCTTGGTaGCTCTGCCCAGGGTTATCT | + |
|
Preference number: 5 (lower is better) Translates to: LSWLPHGDPTLPQRLNQWSGCPW*LCPGLS Trigger: AGATAACCCTGGGCAGAGCAACCAAGGACAACCAGA...CCATTGATTGAGCCTTTGAGGCAAGGTGGGGTCACCATGGGGAAGCCAGGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR CAA 90 bp | AGCTGGAATGACAGGGAAACTGAGGCTGGAGAATGCCCTGGTTTCTGCTACCGCTCCACGTCAATCTGGTaGTCCTTGGTTGCTCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SWNDRETEAGECPGFCYRSTSIW*SLVALP Trigger: GGGCAGAGCAACCAAGGACAACCAGATTGACGTGGA...GCGGTAGCAGAAACCAGGGCATTCTCCAGCCTCAGTTTCCCTGTCATTCCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR CAA 90 bp | TCCTTGAGCTTACTGTCGTCAATCAGGTCCTCTGCATCTGAGAAGTTGAGCACTGAGGAGCTTCTGCGTTaGGGGATAGTGCCCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SLSLLSSIRSSASEKLSTEELLR*GIVPRA Trigger: GGCCCTGGGCACTATCCCCAAACGCAGAAGCTCCTC...AGTGCTCAACTTCTCAGATGCAGAGGACCTGATTGACGACAGTAAGCTCAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229399.2 |
||
| CDS TCA 90 bp | TCGCATGTCCTTGAGCTTACTGTCGTCAATCAGGTCCTCTGCATCTaGGAAGTTGAGCACTTGGTCCCCCTTAGGCAGTGGCTGCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: SHVLELTVVNQVLCI*EVEHLVPLRQWLHC Trigger: ACAGTGCAGCCACTGCCTAAGGGGGACCAAGTGCTCAACTTCTCAGATGCAGAGGACCTGATTGACGACAGTAAGCTCAAGGACATGCGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR CAA 90 bp | CACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCCCCATCGAATTTCTTCCTTTaGATGAACCTGGAGGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: HLASKAQSMGQQSGLHSPSNFFL*MNLEEL Trigger: AAGCTCCTCCAGGTTCATCAAAAGGAAGAAATTCGA...TGGGGAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR CAA 90 bp | ACCCCACCTTGCCTCAAAGGCTCAATCAATGGGCCAGCAGTCGGGCCTCCACTCTCGAATTTCTTCCTTTaGATGAACCTGGAGGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TPPCLKGSINGPAVGPPLSNFFL*MNLEEL Trigger: AAGCTCCTCCAGGTTCATCAAAAGGAAGAAATTCGA...GAGTGGAGGCCCGACTGCTGGCCCATTGATTGAGCCTTTGAGGCAAGGTGGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS-3UTR CAA 90 bp | TCCTTGAGCTTACTGTCGTCAATCAGGTCCTCTGCATCTGAGAAGTTGAGCACTCTTTTCTTCACACGCTaGGTCAGCCCAGGGGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLSLLSSIRSSASEKLSTLFFTR*VSPGVG Trigger: CCCAACCCCTGGGCTGACCAAGCGTGTGAAGAAAAG...AGTGCTCAACTTCTCAGATGCAGAGGACCTGATTGACGACAGTAAGCTCAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229399.2 |
||
| CDS-3UTR CAA 90 bp | ACAAAAACAAAAAGGAGTCTAAAGCTGACTCACTGGAGACACAGGAGTGACAATCACTGTGGGGTGATCTaGGCAGCCTCAGCCCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: TKTKRSLKLTHWRHRSDNHCGVI*AASARM Trigger: CATCCGGGCTGAGGCTGCCAAGATCACCCCACAGTG...ATTGTCACTCCTGTGTCTCCAGTGAGTCAGCTTTAGACTCCTTTTTGTTTTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS-3UTR CAA 90 bp | ACAAAAACAAAAAGGAGTCTAAAGCTGACTCACTGGAGACACAGGAGTGACAATCTGCTTGATCCCACTTaGCTCAGCAGCTGCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TKTKRSLKLTHWRHRSDNLLDPT*LSSCSS Trigger: TGAGGAGCAGCTGCTGAGCAAAGTGGGATCAAGCAG...ATTGTCACTCCTGTGTCTCCAGTGAGTCAGCTTTAGACTCCTTTTTGTTTTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS CAA 72 bp | CGCACCATGCGGCCCCGCAGCACGGCCAGGGTCTGGTaGTCGAAGTCTGGAGAGCCCATGCCTGTGATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RTMRPRSTARVW*SKSGEPMPVML Trigger: CAGCATCACAGGCATGGGCTCTCCAGACTTCGACAACCAGACCCTGGCCGTGCTGCGGGGCCGCATGGTGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS GCA 72 bp | CTGCCAGTGACTCCTCATCCTCGGAGCGGCTGGCTGTaGCTGACGCCATCAGGGACGAGTCTAGCAGCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: LPVTPHPRSGWL*LTPSGTSLAAP Trigger: AGGGGCTGCTAGACTCGTCCCTGATGGCGTCAGGCACAGCCAGCCGCTCCGAGGATGAGGAGTCACTGGCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000229359.2 |
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| CDS CCA 72 bp | TACCGCACCATGCGGCCCCGCAGCACGGCCAGGGTCTaGTTGTCGAAGTCTGGAGAGCCCATGCCTGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: YRTMRPRSTARV*LSKSGEPMPVM Trigger: CATCACAGGCATGGGCTCTCCAGACTTCGACAACCAGACCCTGGCCGTGCTGCGGGGCCGCATGGTGCGGTA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS GCA 72 bp | GGGTTATCTCACGAGAGCGCATTAGGTACCGCACCATaGGGCCCCGCAGCACGGCCAGGGTCTGGTTGTCGA | + |
|
Preference number: 6 (lower is better) Translates to: GLSHESALGTAP*GPAARPGSGCR Trigger: TCGACAACCAGACCCTGGCCGTGCTGCGGGGCCGCATGGTGCGGTACCTAATGCGCTCTCGTGAGATAACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS CCA 72 bp | TCTGCCCTGCCAGTGACTCCTCATCCTCGGAGCGGCTaGCTGTGCCTGACGCCATCAGGGACGAGTCTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SALPVTPHPRSG*LCLTPSGTSLA Trigger: TGCTAGACTCGTCCCTGATGGCGTCAGGCACAGCCAGCCGCTCCGAGGATGAGGAGTCACTGGCAGGGCAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000229359.2 |
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| CDS CCA 72 bp | GTTGTTGCTAAGGCGCCACTTGGAGCCGCACAGCACTaGTCGCCCATCGATATAGATGGGCCGCCGGCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: VVAKAPLGAAQH*SPIDIDGPPAL Trigger: GAGGGCCGGCGGCCCATCTATATCGATGGGCGACCAGTGCTGTGCGGCTCCAAGTGGCGCCTTAGCAACAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS CCA 72 bp | CCACCCCGCCGGCCCCCTTCACCCGGGTGGAGGATTTaGCCAGGCTGCTCTCTACCAGTTCATCATCGAATT | + |
|
Preference number: 6 (lower is better) Translates to: PPRRPPSPGWRI*PGCSLPVHHRI Trigger: AATTCGATGATGAACTGGTAGAGAGCAGCCTGGCCAAATCCTCCACCCGGGTGAAGGGGGCCGGCGGGGTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 ENSMUST00000229399.2 ENSMUST00000229926.2 |
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| CDS CAA 72 bp | TCCACCCCGCCGGCCCCCTTCACCCGGGTGGAGGATTaGGCCAGGCTGCTCTCTACCAGTTCATCATCGAAT | + |
|
Preference number: 6 (lower is better) Translates to: STPPAPFTRVED*ARLLSTSSSSN Trigger: ATTCGATGATGAACTGGTAGAGAGCAGCCTGGCCAAATCCTCCACCCGGGTGAAGGGGGCCGGCGGGGTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 ENSMUST00000229399.2 ENSMUST00000229926.2 |
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| CDS CAA 90 bp | CGGCCTGACTCCACCCCGCCGGCCCCCTTCACCCGGGTGGAGGATTaGGCCAGGCTGCTCTCTACCAGTTCATCATCGAATTTCTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: RPDSTPPAPFTRVED*ARLLSTSSSSNFFL Trigger: AAGGAAGAAATTCGATGATGAACTGGTAGAGAGCAGCCTGGCCAAATCCTCCACCCGGGTGAAGGGGGCCGGCGGGGTGGAGTCAGGCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 ENSMUST00000229399.2 ENSMUST00000229926.2 |
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| CDS CCA 72 bp | TTGGCAGCCTCAGCCCGGATGAGGGCAATGAGGTCCTaGTTGATGAGGAAGACGAATCGCAGGCTGGCGATC | + |
|
Preference number: 6 (lower is better) Translates to: LAASARMRAMRS*LMRKTNRRLAI Trigger: GATCGCCAGCCTGCGATTCGTCTTCCTCATCAACCAGGACCTCATTGCCCTCATCCGGGCTGAGGCTGCCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS CAA 72 bp | GCAGCCTCAGCCCGGATGAGGGCAATGAGGTCCTGGTaGATGAGGAAGACGAATCGCAGGCTGGCGATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: AASARMRAMRSW*MRKTNRRLAIS Trigger: AGAGATCGCCAGCCTGCGATTCGTCTTCCTCATCAACCAGGACCTCATTGCCCTCATCCGGGCTGAGGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS CAA 90 bp | TTGATGAGGAAGACGAATCGCAGGCTGGCGATCTCTACCACAGAGTaGTTGCTAAGGCGCCACTTGGAGCCGCACAGCACTGGTCGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LMRKTNRRLAISTTE*LLRRHLEPHSTGRP Trigger: TGGGCGACCAGTGCTGTGCGGCTCCAAGTGGCGCCTTAGCAACAACTCTGTGGTAGAGATCGCCAGCCTGCGATTCGTCTTCCTCATCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS CAA 90 bp | GTGATCTTGGCAGCCTCAGCCCGGATGAGGGCAATGAGGTCCTGGTaGATGAGGAAGACGAATCGCAGGCTGGCGATCTCTACCACAGAG | + |
|
Preference number: 6 (lower is better) Translates to: VILAASARMRAMRSW*MRKTNRRLAISTTE Trigger: CTCTGTGGTAGAGATCGCCAGCCTGCGATTCGTCTTCCTCATCAACCAGGACCTCATTGCCCTCATCCGGGCTGAGGCTGCCAAGATCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS GCA 72 bp | ACTAGCACCTGCCACTTATGCAGTTCCTGTTCCAGCTaGCGGATCTCTCGTTTCTGGCGCCGGTCAGCCACT | + |
|
Preference number: 6 (lower is better) Translates to: TSTCHLCSSCSS*RISRFWRRSAT Trigger: AGTGGCTGACCGGCGCCAGAAACGAGAGATCCGGCAGCTGGAACAGGAACTGCATAAGTGGCAGGTGCTAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS CAA 72 bp | AAGGTCTCCAAGGTGGGCTGGCTGCTTGATCCCACTTaGCTCAGCAGCTGCTCCTCAGCCTTGCTGAACAGG | + |
|
Preference number: 6 (lower is better) Translates to: KVSKVGWLLDPT*LSSCSSALLNR Trigger: CCTGTTCAGCAAGGCTGAGGAGCAGCTGCTGAGCAAAGTGGGATCAAGCAGCCAGCCCACCTTGGAGACCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS CAA 72 bp | CCCTCCAGAGACAGGTCCACGTCAATCTGGTTGTCCTaGGTTGCTCTGCCCAGGGTTATCTCACGAGAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: PSRDRSTSIWLS*VALPRVISRER Trigger: GCGCTCTCGTGAGATAACCCTGGGCAGAGCAACCAAGGACAACCAGATTGACGTGGACCTGTCTCTGGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS CAA 72 bp | GCCGGACCCTCCAGAGACAGGTCCACGTCAATCTGGTaGTCCTTGGTTGCTCTGCCCAGGGTTATCTCACGA | + |
|
Preference number: 6 (lower is better) Translates to: AGPSRDRSTSIW*SLVALPRVISR Trigger: TCGTGAGATAACCCTGGGCAGAGCAACCAAGGACAACCAGATTGACGTGGACCTGTCTCTGGAGGGTCCGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS CAA 72 bp | ACGAATCGCAGGCTGGCGATCTCTACCACAGAGTTGTaGCTAAGGCGCCACTTGGAGCCGCACAGCACTGGT | + |
|
Preference number: 6 (lower is better) Translates to: TNRRLAISTTEL*LRRHLEPHSTG Trigger: ACCAGTGCTGTGCGGCTCCAAGTGGCGCCTTAGCAACAACTCTGTGGTAGAGATCGCCAGCCTGCGATTCGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS CAA 90 bp | CAAGCCGGACCCTCCAGAGACAGGTCCACGTCAATCTGGTTGTCCTaGGTTGCTCTGCCCAGGGTTATCTCACGAGAGCGCATTAGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: QAGPSRDRSTSIWLS*VALPRVISRERIRY Trigger: GTACCTAATGCGCTCTCGTGAGATAACCCTGGGCAGAGCAACCAAGGACAACCAGATTGACGTGGACCTGTCTCTGGAGGGTCCGGCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS TCA 72 bp | AGCTGCTCCTCAGCCTTGCTGAACAGGGCCTTGCTCTaGATGGCTGCAATGGCTTCTGGGTGTAACTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SCSSALLNRALL*MAAMASGCNCL Trigger: GAGGCAGTTACACCCAGAAGCCATTGCAGCCATTCAGAGCAAGGCCCTGTTCAGCAAGGCTGAGGAGCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS GCA 72 bp | AGTCTGCAGCACAGCATTGATGAGGAGGAGGTCATCTaGAGGCTTCCATCGGCCCAGATCCTTGGTCACCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLQHSIDEEEVI*RLPSAQILGHL Trigger: CAGGTGACCAAGGATCTGGGCCGATGGAAGCCTGCAGATGACCTCCTCCTCATCAATGCTGTGCTGCAGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 ENSMUST00000229671.2 |
||
| CDS GCA 72 bp | GTGGGCCCAGATCCTTGGTCACCTGAAGTGGCTGTTTaGTTTTCTTCACACGCTTGGTCAGCCCAGGGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: VGPDPWSPEVAV*FSSHAWSAQGL Trigger: CAACCCCTGGGCTGACCAAGCGTGTGAAGAAAAGCAAACAGCCACTTCAGGTGACCAAGGATCTGGGCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229399.2 |
||
| CDS CCA 72 bp | CGAAGGGTGAAGCGGCAGCTGAACTTCACACCCAGGTaGACAGATGTCAGGTCGTTAGTCTGCAGCACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RRVKRQLNFTPR*TDVRSLVCSTA Trigger: TGCTGTGCTGCAGACTAACGACCTGACATCTGTCCACCTGGGTGTGAAGTTCAGCTGCCGCTTCACCCTTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 ENSMUST00000229671.2 |
||
| CDS CCA 72 bp | GGTGTGTATGCAGCAAGTCCTGGAAGGTCTCCAAGGTaGGCTGGCTGCTTGATCCCACTTTGCTCAGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: GVYAASPGRSPR*AGCLIPLCSAA Trigger: AGCTGCTGAGCAAAGTGGGATCAAGCAGCCAGCCCACCTTGGAGACCTTCCAGGACTTGCTGCATACACACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
||
| CDS CCA 72 bp | CAAGCCGGACCCTCCAGAGACAGGTCCACGTCAATCTaGTTGTCCTTGGTTGCTCTGCCCAGGGTTATCTCA | + |
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Preference number: 6 (lower is better) Translates to: QAGPSRDRSTSI*LSLVALPRVIS Trigger: TGAGATAACCCTGGGCAGAGCAACCAAGGACAACCAGATTGACGTGGACCTGTCTCTGGAGGGTCCGGCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS CCA 72 bp | AGCTGCCAGTGGGCCCAGATCCTTGGTCACCTGAAGTaGCTGTTTGCTTTTCTTCACACGCTTGGTCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: SCQWAQILGHLK*LFAFLHTLGQP Trigger: GGGCTGACCAAGCGTGTGAAGAAAAGCAAACAGCCACTTCAGGTGACCAAGGATCTGGGCCCACTGGCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229399.2 |
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| CDS CAA 72 bp | AAGACGAATCGCAGGCTGGCGATCTCTACCACAGAGTaGTTGCTAAGGCGCCACTTGGAGCCGCACAGCACT | + |
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Preference number: 6 (lower is better) Translates to: KTNRRLAISTTE*LLRRHLEPHST Trigger: AGTGCTGTGCGGCTCCAAGTGGCGCCTTAGCAACAACTCTGTGGTAGAGATCGCCAGCCTGCGATTCGTCTT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS CAA 90 bp | ATCTTCCAAGCCGGACCCTCCAGAGACAGGTCCACGTCAATCTGGTaGTCCTTGGTTGCTCTGCCCAGGGTTATCTCACGAGAGCGCATT | + |
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Preference number: 6 (lower is better) Translates to: IFQAGPSRDRSTSIW*SLVALPRVISRERI Trigger: AATGCGCTCTCGTGAGATAACCCTGGGCAGAGCAACCAAGGACAACCAGATTGACGTGGACCTGTCTCTGGAGGGTCCGGCTTGGAAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS GCA 72 bp | ATCGGCCCAGATCCTTGGTCACCTGAAGTGGCTGTTTaGTTTTCTTCACACGCTTGGTCAGCCCAGGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: IGPDPWSPEVAV*FSSHAWSAQGL Trigger: CAACCCCTGGGCTGACCAAGCGTGTGAAGAAAAGCAAACAGCCACTTCAGGTGACCAAGGATCTGGGCCGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 ENSMUST00000229671.2 ENSMUST00000229926.2 |
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| CDS CCA 72 bp | AGGCTTCCATCGGCCCAGATCCTTGGTCACCTGAAGTaGCTGTTTGCTTTTCTTCACACGCTTGGTCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: RLPSAQILGHLK*LFAFLHTLGQP Trigger: GGGCTGACCAAGCGTGTGAAGAAAAGCAAACAGCCACTTCAGGTGACCAAGGATCTGGGCCGATGGAAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 ENSMUST00000229671.2 ENSMUST00000229926.2 |
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| CDS TCA 72 bp | TCTGCAGGCTTCCATCGGCCCAGATCCTTGGTCACCTaGAGTGGCTGTTTGCTTTTCTTCACACGCTTGGTC | + |
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Preference number: 6 (lower is better) Translates to: SAGFHRPRSLVT*SGCLLFFTRLV Trigger: GACCAAGCGTGTGAAGAAAAGCAAACAGCCACTTCAGGTGACCAAGGATCTGGGCCGATGGAAGCCTGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 ENSMUST00000229671.2 ENSMUST00000229926.2 |
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| CDS TCA 72 bp | GCACTGTCTGATCCTCGAGTAGGTAATACTGTTTCATaGGCTGCCAGTGGGCCTGCAGAGCCTTGGCAGTAC | + |
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Preference number: 6 (lower is better) Translates to: ALSDPRVGNTVS*AASGPAEPWQY Trigger: GTACTGCCAAGGCTCTGCAGGCCCACTGGCAGCTCATGAAACAGTATTACCTACTCGAGGATCAGACAGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS GCA 72 bp | ATGCCTGTGATGCTGTCCACTAGCACCTGCCACTTATaGAGTTCCTGTTCCAGCTGCCGGATCTCTCGTTTC | + |
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Preference number: 6 (lower is better) Translates to: MPVMLSTSTCHL*SSCSSCRISRF Trigger: GAAACGAGAGATCCGGCAGCTGGAACAGGAACTGCATAAGTGGCAGGTGCTAGTGGACAGCATCACAGGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS GCA 72 bp | ACAGGTCCACGTCAATCTGGTTGTCCTTGGTTGCTCTaGCCAGGGTTATCTCACGAGAGCGCATTAGGTACC | + |
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Preference number: 6 (lower is better) Translates to: TGPRQSGCPWLL*PGLSHESALGT Trigger: GGTACCTAATGCGCTCTCGTGAGATAACCCTGGGCAGAGCAACCAAGGACAACCAGATTGACGTGGACCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS CCA 72 bp | GGAGGTCATCTGCAGGCTTCCATCGGCCCAGATCCTTaGTCACCTGAAGTGGCTGTTTGCTTTTCTTCACAC | + |
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Preference number: 6 (lower is better) Translates to: GGHLQASIGPDP*SPEVAVCFSSH Trigger: GTGTGAAGAAAAGCAAACAGCCACTTCAGGTGACCAAGGATCTGGGCCGATGGAAGCCTGCAGATGACCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 ENSMUST00000229671.2 ENSMUST00000229926.2 |
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| CDS TCA 72 bp | CTTGAGCTTACTGTCGTCAATCAGGTCCTCTGCATCTaGGAAGTTGAGCACTTGGTCCCCCTTAGGCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: LELTVVNQVLCI*EVEHLVPLRQW Trigger: CCACTGCCTAAGGGGGACCAAGTGCTCAACTTCTCAGATGCAGAGGACCTGATTGACGACAGTAAGCTCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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| CDS CAA 72 bp | TTACTGTCGTCAATCAGGTCCTCTGCATCTGAGAAGTaGAGCACTTGGTCCCCCTTAGGCAGTGGCTGCACT | + |
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Preference number: 6 (lower is better) Translates to: LLSSIRSSASEK*STWSPLGSGCT Trigger: AGTGCAGCCACTGCCTAAGGGGGACCAAGTGCTCAACTTCTCAGATGCAGAGGACCTGATTGACGACAGTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041190.17 ENSMUST00000163506.3 |
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