Pregenerated sensors for MCPT9 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000071361

Ensembl transcript IDs: ENSMUST00000095798.2

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	TCTGCTGTGTGCATTCTCTCTTTCTCACATTATGAGCTCCAAGGGTaGCAGTCATTCTTCTTCCACTACAGTGTGCAGCAGTCATCACAA	+
Preference number: 5 (lower is better) Translates to: SAVCILSFSHYELQG*QSFFFHYSVQQSSQ Trigger: TTGTGATGACTGCTGCACACTGTAGTGGAAGAAGAATGACTGTCACCCTTGGAGCTCATAATGTGAGAAAGAGAGAATGCACACAGCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095798.2
CDS CCA 72 bp	CTCGCCCTTTATGACTCTGTTAATCCAGGGCACATGTaGGGAGATTCGGGTGAAGATTGCAGGGGGCTTTGC	+
Preference number: 6 (lower is better) Translates to: LALYDSVNPGHM*GDSGEDCRGLC Trigger: GCAAAGCCCCCTGCAATCTTCACCCGAATCTCCCCACATGTGCCCTGGATTAACAGAGTCATAAAGGGCGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095798.2
CDS CAA 72 bp	GTCCTCCAGAGTCTCCCATGTATACTGATGCCACCTTaGTGGAACTGCCCACACAGATCTGGAGGCTATCCT	+
Preference number: 6 (lower is better) Translates to: VLQSLPCILMPP*WNCPHRSGGYP Trigger: AGGATAGCCTCCAGATCTGTGTGGGCAGTTCCACAAAGGTGGCATCAGTATACATGGGAGACTCTGGAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095798.2
CDS CAA 90 bp	ACAGTAGAGGTCCTCCAGAGTCTCCCATGTATACTGATGCCACCTTaGTGGAACTGCCCACACAGATCTGGAGGCTATCCTTGTAATGCC	+
Preference number: 6 (lower is better) Translates to: TVEVLQSLPCILMPP*WNCPHRSGGYPCNA Trigger: GGCATTACAAGGATAGCCTCCAGATCTGTGTGGGCAGTTCCACAAAGGTGGCATCAGTATACATGGGAGACTCTGGAGGACCTCTACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095798.2
CDS CCA 72 bp	CTCCAGAGTCTCCCATGTATACTGATGCCACCTTTGTaGAACTGCCCACACAGATCTGGAGGCTATCCTTGT	+
Preference number: 6 (lower is better) Translates to: LQSLPCILMPPL*NCPHRSGGYPC Trigger: ACAAGGATAGCCTCCAGATCTGTGTGGGCAGTTCCACAAAGGTGGCATCAGTATACATGGGAGACTCTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095798.2
CDS GCA 72 bp	AGTCTCCCATGTATACTGATGCCACCTTTGTGGAACTaGCCACACAGATCTGGAGGCTATCCTTGTAATGCC	+
Preference number: 6 (lower is better) Translates to: SLPCILMPPLWN*PHRSGGYPCNA Trigger: GGCATTACAAGGATAGCCTCCAGATCTGTGTGGGCAGTTCCACAAAGGTGGCATCAGTATACATGGGAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095798.2
CDS CCA 72 bp	CTTCTTCCACTACAGTGTGCAGCAGTCATCACAAATTaGGGGGCTATGAGAAACCCACCACAGATTGCCACA	+
Preference number: 6 (lower is better) Translates to: LLPLQCAAVITN*GAMRNPPQIAT Trigger: TGTGGCAATCTGTGGTGGGTTTCTCATAGCCCCCCAATTTGTGATGACTGCTGCACACTGTAGTGGAAGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095798.2
CDS TCA 72 bp	TGCATTCTCTCTTTCTCACATTATGAGCTCCAAGGGTaGCAGTCATTCTTCTTCCACTACAGTGTGCAGCAG	+
Preference number: 6 (lower is better) Translates to: CILSFSHYELQG*QSFFFHYSVQQ Trigger: CTGCTGCACACTGTAGTGGAAGAAGAATGACTGTCACCCTTGGAGCTCATAATGTGAGAAAGAGAGAATGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095798.2
CDS GCA 72 bp	GCAAGATGTACTTTTCAACTTTTATCTTCTGCTGTGTaGATTCTCTCTTTCTCACATTATGAGCTCCAAGGG	+
Preference number: 6 (lower is better) Translates to: ARCTFQLLSSAV*ILSFSHYELQG Trigger: CCCTTGGAGCTCATAATGTGAGAAAGAGAGAATGCACACAGCAGAAGATAAAAGTTGAAAAGTACATCTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095798.2