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Pregenerated sensors for MCPT4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000061068

Ensembl transcript IDs: ENSMUST00000043249.10

Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGCTGAGGACAGGCCGGGGGCAGGCAGGTGACAGGATGGACACATaGTTTGTTGAACCCAAGGGTTATCAGAAGAGCTCTGGCTTGAAG +
Preference number: 1 (lower is better)
Translates to: RLRTGRGQAGDRMDT*FVEPKGYQKSSGLK
Trigger: CTTCAAGCCAGAGCTCTTCTGATAACCCTTGGGTTCAACAAAGCATGTGTCCATCCTGTCACCTGCCTGCCCCCGGCCTGTCCTCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043249.10
3UTR-3UTR TCA 90 bp TGCATTACAGGGAACAGTCCATCATCACAGAATTCATCTTTCAGATCATCTTGGCCGGGGGCAGGCAGGTaGCAGGATGGACACATGCTT +
Preference number: 2 (lower is better)
Translates to: CITGNSPSSQNSSFRSSWPGAGR*QDGHML
Trigger: AAGCATGTGTCCATCCTGTCACCTGCCTGCCCCCGG...CCAAGATGATCTGAAAGATGAATTCTGTGATGATGGACTGTTCCCTGTAATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043249.10
3UTR TCA 72 bp GTGGAGTCACACAGCTGCTGGAGGTTAGGGCTTTACTaGGGTGCATTACAGGGAACAGTCCATCATCACAGA +
Preference number: 3 (lower is better)
Translates to: VESHSCWRLGLY*GALQGTVHHHR
Trigger: TCTGTGATGATGGACTGTTCCCTGTAATGCACCTCAGTAAAGCCCTAACCTCCAGCAGCTGTGTGACTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043249.10
3UTR GCA 72 bp GTCACACAGCTGCTGGAGGTTAGGGCTTTACTGAGGTaGATTACAGGGAACAGTCCATCATCACAGAATTCA +
Preference number: 3 (lower is better)
Translates to: VTQLLEVRALLR*ITGNSPSSQNS
Trigger: TGAATTCTGTGATGATGGACTGTTCCCTGTAATGCACCTCAGTAAAGCCCTAACCTCCAGCAGCTGTGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043249.10
3UTR TCA 72 bp GCTCAAGTCAATTCTTCATTGAGCATAGAGAGGGACTaGGTGTTTAGATCACAGAGTGGAGTCACACAGCTG +
Preference number: 3 (lower is better)
Translates to: AQVNSSLSIERD*VFRSQSGVTQL
Trigger: CAGCTGTGTGACTCCACTCTGTGATCTAAACACTCAGTCCCTCTCTATGCTCAATGAAGAATTGACTTGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043249.10
CDS-3UTR TCA 90 bp ACAGTCCATCATCACAGAATTCATCTTTCAGATCATCTTGGGGGCAGGCTGGGGATGAGGAGATTCGGGTaGAGACTGCAGGGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: TVHHHRIHLSDHLGGRLGMRRFG*RLQGAL
Trigger: CAAAGCCCCCTGCAGTCTTCACCCGAATCTCCTCAT...CCCCAGCCTGCCCCCAAGATGATCTGAAAGATGAATTCTGTGATGATGGACTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000043249.10
CDS-3UTR GCA 90 bp ACAGGATGGACACATGCTTTGTTGAACCCAAGGGTTATCAGAAGAGCTCTGGCTGATTCGGGTGAAGACTaGAGGGGGCTTTGCATCTCC +
Preference number: 4 (lower is better)
Translates to: TGWTHALLNPRVIRRALADSGED*RGLCIS
Trigger: GGAGATGCAAAGCCCCCTGCAGTCTTCACCCGAATC...AGCCAGAGCTCTTCTGATAACCCTTGGGTTCAACAAAGCATGTGTCCATCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043249.10
CDS-3UTR TCA 90 bp CAGGTGACAGGATGGACACATGCTTTGTTGAACCCAAGGGTTATCAGAAGAGCTCTCCCTCAGTATATCTaGGGTAGGTTCTGTCACTCC +
Preference number: 4 (lower is better)
Translates to: QVTGWTHALLNPRVIRRALPQYI*GRFCHS
Trigger: GGAGTGACAGAACCTACCTCAGATATACTGAGGGAG...AGCTCTTCTGATAACCCTTGGGTTCAACAAAGCATGTGTCCATCCTGTCACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043249.10
CDS-3UTR TCA 90 bp ACAGGATGGACACATGCTTTGTTGAACCCAAGGGTTATCAGAAGAGCTCTGGCTAGGCCTCTTTATCCATaGTTCTCAGTTTCACCTCCC +
Preference number: 4 (lower is better)
Translates to: TGWTHALLNPRVIRRALARPLYP*FSVSPP
Trigger: GGGAGGTGAAACTGAGAATCATGGATAAAGAGGCCT...AGCCAGAGCTCTTCTGATAACCCTTGGGTTCAACAAAGCATGTGTCCATCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043249.10
CDS-3UTR CCA 90 bp CCCAAGGGTTATCAGAAGAGCTCTGGCTTGAAGACTCTGATGCACGCAGGTCAGTTATCTTCTGCTGTGTaGATTCTGTCTTGCTCACAT +
Preference number: 4 (lower is better)
Translates to: PKGYQKSSGLKTLMHAGQLSSAV*ILSCSH
Trigger: ATGTGAGCAAGACAGAATCCACACAGCAGAAGATAA...CTGACCTGCGTGCATCAGAGTCTTCAAGCCAGAGCTCTTCTGATAACCCTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043249.10
CDS-3UTR TCA 90 bp TGCATTACAGGGAACAGTCCATCATCACAGAATTCATCTTTCAGATCATCTTGGACCCTCTCTCAGTGGTaGTCTCCAGATGGGCCATGT +
Preference number: 4 (lower is better)
Translates to: CITGNSPSSQNSSFRSSWTLSQW*SPDGPC
Trigger: ACATGGCCCATCTGGAGATCACCACTGAGAGAGGGT...CCAAGATGATCTGAAAGATGAATTCTGTGATGATGGACTGTTCCCTGTAATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043249.10
CDS-3UTR TCA 90 bp AGGGCTTTACTGAGGTGCATTACAGGGAACAGTCCATCATCACAGAATTCATCTAATCCAGGGCACATATaGGGAGATTCGGGTGAAGAC +
Preference number: 4 (lower is better)
Translates to: RALLRCITGNSPSSQNSSNPGHI*GDSGED
Trigger: GTCTTCACCCGAATCTCCTCATATGTGCCCTGGATT...AGATGAATTCTGTGATGATGGACTGTTCCCTGTAATGCACCTCAGTAAAGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043249.10
CDS-3UTR GCA 90 bp TGCATTACAGGGAACAGTCCATCATCACAGAATTCATCTTTCAGATCATCTTGGGACTGCAGGGGGCTTTaGATCTCCGCGTCCATAAGA +
Preference number: 4 (lower is better)
Translates to: CITGNSPSSQNSSFRSSWDCRGL*ISASIR
Trigger: TCTTATGGACGCGGAGATGCAAAGCCCCCTGCAGTC...CCAAGATGATCTGAAAGATGAATTCTGTGATGATGGACTGTTCCCTGTAATGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043249.10
CDS-3UTR GCA 90 bp ACAGGGAACAGTCCATCATCACAGAATTCATCTTTCAGATCATCTTGGGGGCAGGTGTGGATTCTGTCTTaGTCACATCATGAGCTCCAA +
Preference number: 4 (lower is better)
Translates to: TGNSPSSQNSSFRSSWGQVWILS*SHHELQ
Trigger: TTGGAGCTCATGATGTGAGCAAGACAGAATCCACAC...CTGCCCCCAAGATGATCTGAAAGATGAATTCTGTGATGATGGACTGTTCCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043249.10
CDS-3UTR GCA 90 bp GTGCATTACAGGGAACAGTCCATCATCACAGAATTCATCTTTCAGATCATCTTGTTTTCTTTCTGGGACTaGCCACGCAGACCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: VHYREQSIITEFIFQIILFSFWD*PRRPGG
Trigger: ACCTCCAGGTCTGCGTGGGCAGTCCCAGAAAGAAAA...CAAGATGATCTGAAAGATGAATTCTGTGATGATGGACTGTTCCCTGTAATGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043249.10
CDS-3UTR GCA 90 bp ACAGGGAACAGTCCATCATCACAGAATTCATCTTTCAGATCATCTTGGGGGCAGTCTTCCACTACAGTGTaGAGCAGTCAACACAAATTG +
Preference number: 4 (lower is better)
Translates to: TGNSPSSQNSSFRSSWGQSSTTV*SSQHKL
Trigger: CAATTTGTGTTGACTGCTGCACACTGTAGTGGAAGA...CTGCCCCCAAGATGATCTGAAAGATGAATTCTGTGATGATGGACTGTTCCCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043249.10
CDS-3UTR CCA 90 bp ACAGGGAACAGTCCATCATCACAGAATTCATCTTTCAGATCATCTTGGGGGCAGCAGAGGGAGTCTCTTTaGCTTTCTTTTGAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: TGNSPSSQNSSFRSSWGQQRESL*LSFEAS
Trigger: TGAAGCTTCAAAAGAAAGCCAAAGAGACTCCCTCTG...CTGCCCCCAAGATGATCTGAAAGATGAATTCTGTGATGATGGACTGTTCCCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043249.10
CDS-3UTR CCA 90 bp GTCAGGAAGTCAGTAGTTGAGATTGTTAACATGCAAGATAGTAGCTCAAGTCAACTGATCTTTTCTTTCTaGGACTGCCCACGCAGACCT +
Preference number: 4 (lower is better)
Translates to: VRKSVVEIVNMQDSSSSQLIFSF*DCPRRP
Trigger: AGGTCTGCGTGGGCAGTCCCAGAAAGAAAAGATCAG...TTGACTTGAGCTACTATCTTGCATGTTAACAATCTCAACTACTGACTTCCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043249.10
CDS-3UTR TCA 90 bp GTCAGGAAGTCAGTAGTTGAGATTGTTAACATGCAAGATAGTAGCTCAAGTCAAGTCTCCCTTGTATGCTaGTCTTTTCTTTCTGGGACT +
Preference number: 4 (lower is better)
Translates to: VRKSVVEIVNMQDSSSSQVSLVC*SFLSGT
Trigger: AGTCCCAGAAAGAAAAGATCAGCATACAAGGGAGAC...TTGACTTGAGCTACTATCTTGCATGTTAACAATCTCAACTACTGACTTCCTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043249.10
CDS-3UTR GCA 90 bp GTCAGGAAGTCAGTAGTTGAGATTGTTAACATGCAAGATAGTAGCTCAAGTCAATCTACTTTTATCTTCTaGTGTGTGGATTCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: VRKSVVEIVNMQDSSSSQSTFIF*CVDSVL
Trigger: CAAGACAGAATCCACACAGCAGAAGATAAAAGTAGA...TTGACTTGAGCTACTATCTTGCATGTTAACAATCTCAACTACTGACTTCCTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043249.10
CDS CCA 90 bp GTAGAGGTCCTCCAGAGTCTCCCTTGTATGCTGATCTTTTCTTTCTaGGACTGCCCACGCAGACCTGGAGGTTATAGTCGTAATGCCAAT +
Preference number: 5 (lower is better)
Translates to: VEVLQSLPCMLIFSF*DCPRRPGGYSRNAN
Trigger: ATTGGCATTACGACTATAACCTCCAGGTCTGCGTGGGCAGTCCCAGAAAGAAAAGATCAGCATACAAGGGAGACTCTGGAGGACCTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043249.10
CDS-3UTR CAA 90 bp CCCAAGGGTTATCAGAAGAGCTCTGGCTTGAAGACTCTGATGCACGCAGGTCAGCCTCCAGAGTCTCCCTaGTATGCTGATCTTTTCTTT +
Preference number: 5 (lower is better)
Translates to: PKGYQKSSGLKTLMHAGQPPESP*YADLFF
Trigger: AAAGAAAAGATCAGCATACAAGGGAGACTCTGGAGG...CTGACCTGCGTGCATCAGAGTCTTCAAGCCAGAGCTCTTCTGATAACCCTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043249.10
CDS GCA 90 bp GTCCTCCAGAGTCTCCCTTGTATGCTGATCTTTTCTTTCTGGGACTaGCCACGCAGACCTGGAGGTTATAGTCGTAATGCCAATAGTTTT +
Preference number: 5 (lower is better)
Translates to: VLQSLPCMLIFSFWD*PRRPGGYSRNANSF
Trigger: AAAACTATTGGCATTACGACTATAACCTCCAGGTCTGCGTGGGCAGTCCCAGAAAGAAAAGATCAGCATACAAGGGAGACTCTGGAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043249.10
CDS-3UTR CAA 90 bp TGCATTACAGGGAACAGTCCATCATCACAGAATTCATCTTTCAGATCATCTTGGAGACTGCAGGGGGCTTaGCATCTCCGCGTCCATAAG +
Preference number: 5 (lower is better)
Translates to: CITGNSPSSQNSSFRSSWRLQGA*HLRVHK
Trigger: CTTATGGACGCGGAGATGCAAAGCCCCCTGCAGTCT...CCAAGATGATCTGAAAGATGAATTCTGTGATGATGGACTGTTCCCTGTAATGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043249.10
CDS TCA 90 bp TCACAGAGGGAGTCTCTTTGGCTTTCTTTTGAAGCTTCAGCAACATaGTGTCATGGAGATTGGAATAGAAGTTGTACTTTGGGTGAACGA +
Preference number: 5 (lower is better)
Translates to: SQRESLWLSFEASAT*CHGDWNRSCTLGER
Trigger: TCGTTCACCCAAAGTACAACTTCTATTCCAATCTCCATGACATCATGTTGCTGAAGCTTCAAAAGAAAGCCAAAGAGACTCCCTCTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043249.10
CDS CAA 72 bp ACCCCAGCACACAGTAGAGGTCCTCCAGAGTCTCCCTaGTATGCTGATCTTTTCTTTCTGGGACTGCCCACG +
Preference number: 6 (lower is better)
Translates to: TPAHSRGPPESP*YADLFFLGLPT
Trigger: CGTGGGCAGTCCCAGAAAGAAAAGATCAGCATACAAGGGAGACTCTGGAGGACCTCTACTGTGTGCTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043249.10
CDS TCA 72 bp ATCCATGATTCTCAGTTTCACCTCCCTCAGTATATCTaGGGTAGGTTCTGTCACTCCAGTTCGCCCCCAGCC +
Preference number: 6 (lower is better)
Translates to: IHDSQFHLPQYI*GRFCHSSSPPA
Trigger: GGCTGGGGGCGAACTGGAGTGACAGAACCTACCTCAGATATACTGAGGGAGGTGAAACTGAGAATCATGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043249.10
CDS CCA 72 bp CTCCAGAGTCTCCCTTGTATGCTGATCTTTTCTTTCTaGGACTGCCCACGCAGACCTGGAGGTTATAGTCGT +
Preference number: 6 (lower is better)
Translates to: LQSLPCMLIFSF*DCPRRPGGYSR
Trigger: ACGACTATAACCTCCAGGTCTGCGTGGGCAGTCCCAGAAAGAAAAGATCAGCATACAAGGGAGACTCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043249.10
CDS TCA 72 bp CTTGCCCTTTATAACTCTGTTAATCCAGGGCACATATaGGGAGATTCGGGTGAAGACTGCAGGGGGCTTTGC +
Preference number: 6 (lower is better)
Translates to: LALYNSVNPGHI*GDSGEDCRGLC
Trigger: GCAAAGCCCCCTGCAGTCTTCACCCGAATCTCCTCATATGTGCCCTGGATTAACAGAGTTATAAAGGGCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043249.10
CDS GCA 72 bp AGTCTCCCTTGTATGCTGATCTTTTCTTTCTGGGACTaGCCACGCAGACCTGGAGGTTATAGTCGTAATGCC +
Preference number: 6 (lower is better)
Translates to: SLPCMLIFSFWD*PRRPGGYSRNA
Trigger: GGCATTACGACTATAACCTCCAGGTCTGCGTGGGCAGTCCCAGAAAGAAAAGATCAGCATACAAGGGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043249.10
CDS GCA 72 bp TCCAAGGGTGACAGTGATTTCTCTTCCACTACAGTGTaGAGCAGTCAACACAAATTGGCGGGTTATGAGAAA +
Preference number: 6 (lower is better)
Translates to: SKGDSDFSSTTV*SSQHKLAGYEK
Trigger: TTTCTCATAACCCGCCAATTTGTGTTGACTGCTGCACACTGTAGTGGAAGAGAAATCACTGTCACCCTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043249.10
CDS TCA 72 bp GAGTCTCTTTGGCTTTCTTTTGAAGCTTCAGCAACATaGTGTCATGGAGATTGGAATAGAAGTTGTACTTTG +
Preference number: 6 (lower is better)
Translates to: ESLWLSFEASAT*CHGDWNRSCTL
Trigger: CAAAGTACAACTTCTATTCCAATCTCCATGACATCATGTTGCTGAAGCTTCAAAAGAAAGCCAAAGAGACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043249.10